Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911530 | XP_003619170.1 | 79.112 | 1216 | 179 | 9 | 1 | 1179 | 1 | 1178 | 0.0 | 1856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035140 | Msa0911530 | 0.804448 | 2.149702e-49 | -8.615850e-47 |
| Msa0761670 | Msa0911530 | 0.807948 | 3.939442e-50 | -8.615850e-47 |
| Msa0225860 | Msa0911530 | 0.831291 | 1.814624e-55 | -8.615850e-47 |
| Msa0260510 | Msa0911530 | 0.827747 | 1.318663e-54 | -8.615850e-47 |
| Msa0298470 | Msa0911530 | 0.817914 | 2.575597e-52 | -8.615850e-47 |
| Msa0911530 | Msa1397400 | 0.821916 | 3.130959e-53 | -8.615850e-47 |
| Msa0911530 | Msa1420950 | 0.801688 | 8.003224e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911530 | MtrunA17_Chr6g0464491 | 79.112 | 1216 | 179 | 9 | 1 | 1179 | 1 | 1178 | 0.0 | 1856 |
| Msa0911530 | MtrunA17_Chr6g0464501 | 60.920 | 174 | 63 | 1 | 361 | 534 | 1 | 169 | 2.72e-53 | 191 |
| Msa0911530 | MtrunA17_Chr6g0464501 | 59.542 | 131 | 46 | 3 | 406 | 534 | 165 | 290 | 1.68e-33 | 133 |
| Msa0911530 | MtrunA17_Chr6g0464501 | 47.458 | 118 | 51 | 3 | 614 | 720 | 9 | 126 | 1.85e-17 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 223 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATCAATGTTCTCTTTAT+TGG | 0.145347 | 6_2:+18107518 | None:intergenic |
| TTCCTTTGGGGAAACATTTA+AGG | 0.162835 | 6_2:+18108417 | None:intergenic |
| AATCTTCTACATGATGCTTT+AGG | 0.183296 | 6_2:-18106222 | Msa0911530:CDS |
| ACAACATCTCCAAGTGTATT+TGG | 0.216649 | 6_2:+18105377 | None:intergenic |
| TGCCATCATCTGCTTGTAAC+TGG | 0.219821 | 6_2:+18110367 | None:intergenic |
| GTTGAAGCTTCAAATTTATT+AGG | 0.243957 | 6_2:+18105434 | None:intergenic |
| GTTAAATTATCAGAAGAATT+TGG | 0.247714 | 6_2:-18106369 | Msa0911530:CDS |
| TGATCTTGCTATTCACAAAA+TGG | 0.259471 | 6_2:-18106952 | Msa0911530:CDS |
| AATTGTAAGGTTTGTGGATT+TGG | 0.262304 | 6_2:+18111737 | None:intergenic |
| AATCTCGGAAATTGTGGATT+TGG | 0.270682 | 6_2:-18106498 | Msa0911530:CDS |
| GTTGAAGATGTTTCTGAAAC+TGG | 0.275759 | 6_2:-18106687 | Msa0911530:CDS |
| TGTTGAACAACTTCACAAAT+TGG | 0.277541 | 6_2:-18107162 | Msa0911530:CDS |
| ATCTTCTACATGATGCTTTA+GGG | 0.280989 | 6_2:-18106221 | Msa0911530:CDS |
| TCCGTCTGTTTCAGAAGAAT+TGG | 0.281047 | 6_2:-18107436 | Msa0911530:CDS |
| ACAACTTTCTCTGATTTATC+AGG | 0.284763 | 6_2:-18111477 | Msa0911530:intron |
| TCTGATTACAAGGTTGATTC+AGG | 0.295466 | 6_2:-18109028 | Msa0911530:intron |
| ATCAAATGTAGATGCAAATA+TGG | 0.301698 | 6_2:-18109191 | Msa0911530:CDS |
| AACGGCCACTGGATTCCTTT+GGG | 0.317159 | 6_2:+18108404 | None:intergenic |
| CTCGTCTCTACTTCATTTGA+TGG | 0.319396 | 6_2:+18108184 | None:intergenic |
| TGATTTATAGAAACTGCTTC+TGG | 0.321178 | 6_2:-18104737 | Msa0911530:intron |
| AAAATTATGCATTGTGGATC+TGG | 0.332469 | 6_2:-18106153 | Msa0911530:CDS |
| AATTTCTTCAACAGTCAAAT+TGG | 0.336140 | 6_2:+18107058 | None:intergenic |
| CGATGATAATAATTGTGTTA+TGG | 0.341487 | 6_2:-18108359 | Msa0911530:CDS |
| GAACGGCCACTGGATTCCTT+TGG | 0.347428 | 6_2:+18108403 | None:intergenic |
| TCTGATCACAAGGTTGATTC+AGG | 0.349545 | 6_2:-18110047 | Msa0911530:intron |
| CATACAGATTGGTGTTAATC+AGG | 0.353857 | 6_2:-18107646 | Msa0911530:CDS |
| ACCAAGTGAGGATGAAAATA+TGG | 0.355595 | 6_2:-18108578 | Msa0911530:CDS |
| CTTGAGTGATGAACATAAAC+TGG | 0.356259 | 6_2:-18110102 | Msa0911530:CDS |
| ACCATGTTACTATTATTTGA+TGG | 0.368476 | 6_2:-18104503 | Msa0911530:three_prime_UTR |
| TCATCCTCACTTGGTGCTGC+AGG | 0.370611 | 6_2:+18108586 | None:intergenic |
| AAATGAAGACAAGCAGGAAT+TGG | 0.372018 | 6_2:-18108611 | Msa0911530:CDS |
| TTGCAAAGCCTCCACGTTAA+CGG | 0.377864 | 6_2:+18108654 | None:intergenic |
| TAGTTGTTGTTGTTGGTGTT+TGG | 0.385001 | 6_2:-18111617 | Msa0911530:five_prime_UTR |
| CACGATCTATTTGTGACAAC+TGG | 0.386125 | 6_2:-18105988 | Msa0911530:CDS |
| GCTCCATGACATATCCTTGA+TGG | 0.389395 | 6_2:+18108449 | None:intergenic |
| ATGTTCTCTTTATGTATCAT+TGG | 0.392882 | 6_2:+18104665 | None:intergenic |
| GATGTTCAAATTGAAGCTTC+AGG | 0.398042 | 6_2:-18110285 | Msa0911530:intron |
| CATGCAAATGAGGGTCAATA+AGG | 0.399534 | 6_2:-18109251 | Msa0911530:CDS |
| TTATGATTTGTGATAACTAT+TGG | 0.407261 | 6_2:-18104457 | Msa0911530:three_prime_UTR |
| TACACTTGGAGATGTTGTTA+TGG | 0.410180 | 6_2:-18105372 | Msa0911530:CDS |
| TTAGCAACAACTGATTCATC+AGG | 0.411747 | 6_2:+18106096 | None:intergenic |
| TCAGACTTGACTTCACTTAG+TGG | 0.411806 | 6_2:+18109046 | None:intergenic |
| CATTTACGATTGACCGTTGA+GGG | 0.414751 | 6_2:+18106250 | None:intergenic |
| ACTTATCCCATGGCAGCATT+AGG | 0.415719 | 6_2:-18105946 | Msa0911530:intron |
| GAATCACTCGCTGGTGTCCC+TGG | 0.416325 | 6_2:+18107564 | None:intergenic |
| TTCTGCATTCCAACCTTCAC+CGG | 0.418312 | 6_2:+18107497 | None:intergenic |
| GTTCTGAATTGTAAGGTTTG+TGG | 0.419955 | 6_2:+18111731 | None:intergenic |
| ATCATTGGTGTAGCCTTTGA+TGG | 0.420869 | 6_2:+18104680 | None:intergenic |
| CCAAGTAATTTCTCTGATGC+TGG | 0.424125 | 6_2:+18107738 | None:intergenic |
| GAAGAAGGTTCTGAATTGTA+AGG | 0.425552 | 6_2:+18111724 | None:intergenic |
| ATTTCTGTGTTTCAAATTCG+TGG | 0.425642 | 6_2:+18111645 | None:intergenic |
| CCCACTATGCTAAGTAATCC+AGG | 0.429214 | 6_2:-18107582 | Msa0911530:CDS |
| GGAGTAGTTAAAATTTGATC+TGG | 0.429336 | 6_2:+18109067 | None:intergenic |
| CCAGCATCAGAGAAATTACT+TGG | 0.429560 | 6_2:-18107738 | Msa0911530:CDS |
| GATCCAATGTCATCTCCTTC+AGG | 0.431480 | 6_2:+18108676 | None:intergenic |
| CAATGTTCTCTTTATTGGCA+TGG | 0.432585 | 6_2:+18107523 | None:intergenic |
| GCCATCATCTGCTTGTAACT+GGG | 0.437677 | 6_2:+18110368 | None:intergenic |
| GCTTGTAACTGGGGTGGTGC+AGG | 0.438129 | 6_2:+18110378 | None:intergenic |
| AACTCCATTTGATTAGTTTG+AGG | 0.440380 | 6_2:+18105155 | None:intergenic |
| CTTGGTGCATGACTCTCATA+TGG | 0.441785 | 6_2:+18106393 | None:intergenic |
| GAACATTAAATTTGACAAGA+AGG | 0.452593 | 6_2:-18104648 | Msa0911530:CDS |
| CCGTCTGTTTCAGAAGAATT+GGG | 0.457744 | 6_2:-18107435 | Msa0911530:CDS |
| ACTTCACGTAATGGATCAAT+TGG | 0.458948 | 6_2:+18106984 | None:intergenic |
| TCACAAACTTCAATATCTCT+TGG | 0.460424 | 6_2:+18107681 | None:intergenic |
| TCTTCTGATAATTTAACACT+TGG | 0.462081 | 6_2:+18106375 | None:intergenic |
| CATGATGGTATTGGTGGAGT+TGG | 0.464433 | 6_2:-18105254 | Msa0911530:CDS |
| CTGATACGGTGAGCCGGAAA+AGG | 0.465607 | 6_2:-18105211 | Msa0911530:CDS |
| AGTGCCTCAAACTAATCAAA+TGG | 0.468079 | 6_2:-18105159 | Msa0911530:CDS |
| TGAACTTGTCCACCAACAAA+AGG | 0.468417 | 6_2:+18106558 | None:intergenic |
| CCACACCTGTTGATGCATCA+AGG | 0.468546 | 6_2:+18108317 | None:intergenic |
| TGCAGATACAAGCGGTGTAA+AGG | 0.469063 | 6_2:-18106781 | Msa0911530:intron |
| ATAAATCAGAGAAAGTTGTT+TGG | 0.469679 | 6_2:+18111481 | None:intergenic |
| TTTGCAAATGAGTGTCGATC+AGG | 0.472173 | 6_2:-18108638 | Msa0911530:CDS |
| TCTATGTTCTTCAAATTCGC+TGG | 0.472238 | 6_2:+18111509 | None:intergenic |
| ATATTTGTAGTTGTTGTTGT+TGG | 0.473395 | 6_2:-18111624 | Msa0911530:five_prime_UTR |
| CAATATACCTAATGCTGCCA+TGG | 0.473981 | 6_2:+18105939 | None:intergenic |
| GTCTGCCTTGATGCATCAAC+CGG | 0.477611 | 6_2:-18107104 | Msa0911530:CDS |
| GTGTTCAACCGAACGGCCAC+TGG | 0.477947 | 6_2:+18108393 | None:intergenic |
| AATGGAGAAGGTAAACAGTC+AGG | 0.481800 | 6_2:-18105312 | Msa0911530:CDS |
| GCATCTACATTTGATGATGC+AGG | 0.483906 | 6_2:+18109199 | None:intergenic |
| AGGGACACCAGCGAGTGATT+CGG | 0.484622 | 6_2:-18107562 | Msa0911530:CDS |
| AAAGGAATCCAGTGGCCGTT+CGG | 0.485225 | 6_2:-18108401 | Msa0911530:CDS |
| CAGAGTTATTGCAAGAAACA+TGG | 0.488192 | 6_2:-18111536 | Msa0911530:CDS |
| TGTGAAGTTGTTCAACAAAA+CGG | 0.489982 | 6_2:+18107168 | None:intergenic |
| TGATCTCGAAGTTCATGAAA+TGG | 0.491169 | 6_2:-18108161 | Msa0911530:CDS |
| CAAGTAATTTCTCTGATGCT+GGG | 0.491633 | 6_2:+18107739 | None:intergenic |
| ATCAATCTGATACGGTGAGC+CGG | 0.499907 | 6_2:-18105217 | Msa0911530:CDS |
| TCAGTAGGCAGAACTTGAAC+TGG | 0.500216 | 6_2:+18108208 | None:intergenic |
| CATTGGATCTGTTAACATAC+AGG | 0.501035 | 6_2:-18109278 | Msa0911530:CDS |
| TTTGACAAGAAGGATGAAGT+TGG | 0.502927 | 6_2:-18104638 | Msa0911530:CDS |
| TACAGGAAAGCATGCAAATG+AGG | 0.504197 | 6_2:-18109261 | Msa0911530:CDS |
| GAATTTGAAGAACATAGAAA+TGG | 0.505915 | 6_2:-18111504 | Msa0911530:CDS |
| GACTACAATCTCGGAAATTG+TGG | 0.512589 | 6_2:-18106504 | Msa0911530:CDS |
| AGATGCTTATCAAAAGAAGT+TGG | 0.513921 | 6_2:-18104708 | Msa0911530:CDS |
| CGGTGAGCCGGAAAAGGAAA+AGG | 0.515073 | 6_2:-18105205 | Msa0911530:CDS |
| ACATTGATCCCGGTGAAGGT+TGG | 0.515644 | 6_2:-18107506 | Msa0911530:CDS |
| TTAGTCTCAACTTCACGTAA+TGG | 0.516070 | 6_2:+18106975 | None:intergenic |
| TTTATGTTCATCACTCAAGT+TGG | 0.516277 | 6_2:+18110106 | None:intergenic |
| ATCATCAGAAAAGACATGTA+TGG | 0.516542 | 6_2:-18105489 | Msa0911530:CDS |
| ATGTGCCTTGATGCATCAAC+AGG | 0.518671 | 6_2:-18108322 | Msa0911530:CDS |
| GTTGTTGCTAAGAATACTGA+TGG | 0.519054 | 6_2:-18106084 | Msa0911530:CDS |
| TTTCTGTGTTTCAAATTCGT+GGG | 0.519822 | 6_2:+18111646 | None:intergenic |
| CTTTCTTCCGAATCACTCGC+TGG | 0.523204 | 6_2:+18107555 | None:intergenic |
| TTTCACAGTCATCTTCAAGA+AGG | 0.523312 | 6_2:+18106319 | None:intergenic |
| GGTAGCATCGATAGCCCTCA+TGG | 0.524228 | 6_2:-18106636 | Msa0911530:CDS |
| GATGTTCATGATGGTATTGG+TGG | 0.524467 | 6_2:-18105260 | Msa0911530:CDS |
| ACTTCATTTGATGGATCAGT+AGG | 0.525159 | 6_2:+18108193 | None:intergenic |
| GAAAATCCAATGCACTCCTC+AGG | 0.526183 | 6_2:+18105458 | None:intergenic |
| TGATAAATCCATTGCTGCCG+AGG | 0.526272 | 6_2:-18106454 | Msa0911530:CDS |
| TCTGATGTTCATGATGGTAT+TGG | 0.526349 | 6_2:-18105263 | Msa0911530:CDS |
| AAACATTGAAGTTATAGACT+TGG | 0.528034 | 6_2:-18110328 | Msa0911530:CDS |
| TTCCTTAAATGTTTCCCCAA+AGG | 0.529071 | 6_2:-18108419 | Msa0911530:CDS |
| TGATAATAATTCTGTTCTAT+CGG | 0.529197 | 6_2:-18107138 | Msa0911530:CDS |
| TTAGATCCTGAGGAGTGCAT+TGG | 0.533601 | 6_2:-18105464 | Msa0911530:CDS |
| GAAGTTGGACTCACCATCAA+AGG | 0.533643 | 6_2:-18104693 | Msa0911530:CDS |
| AAGTTGGATCAGTGATGTCT+AGG | 0.533943 | 6_2:-18104622 | Msa0911530:CDS |
| ACGGCCACTGGATTCCTTTG+GGG | 0.538572 | 6_2:+18108405 | None:intergenic |
| TGTTGAAGAAATTCTAGATA+CGG | 0.539350 | 6_2:-18107048 | Msa0911530:CDS |
| GAGGGCTATCGATGCTACCT+TGG | 0.539650 | 6_2:+18106640 | None:intergenic |
| TCAAATTCGTGGGAACAAGA+AGG | 0.544085 | 6_2:+18111656 | None:intergenic |
| CCCTGGATTACTTAGCATAG+TGG | 0.546032 | 6_2:+18107581 | None:intergenic |
| ACAGAGGGACAAGTTGCAAA+CGG | 0.548190 | 6_2:-18107402 | Msa0911530:CDS |
| ATCAGTATCCTCGGCAGCAA+TGG | 0.549143 | 6_2:+18106446 | None:intergenic |
| TGATTCATCAGGGAAACAAA+AGG | 0.549353 | 6_2:+18106107 | None:intergenic |
| TTCTAGTAGTACTTATCCCA+TGG | 0.550004 | 6_2:-18105956 | Msa0911530:CDS |
| CCTGGATTACTTAGCATAGT+GGG | 0.550904 | 6_2:+18107582 | None:intergenic |
| TCGTTCATGTCAACTGCACT+AGG | 0.551375 | 6_2:+18107474 | None:intergenic |
| ACTAATAATGCAGCTACAAG+TGG | 0.553044 | 6_2:-18107798 | Msa0911530:CDS |
| CACAGTGGAGACTACAATCT+CGG | 0.554920 | 6_2:-18106513 | Msa0911530:CDS |
| TCTTCTACATGATGCTTTAG+GGG | 0.555015 | 6_2:-18106220 | Msa0911530:CDS |
| GATCAGATCAATATCCATCA+AGG | 0.555030 | 6_2:-18108463 | Msa0911530:CDS |
| AGAACAAAATCAATCTGATA+CGG | 0.557315 | 6_2:-18105225 | Msa0911530:CDS |
| TGATTTGATGGAGGAAGAAG+TGG | 0.559999 | 6_2:-18106736 | Msa0911530:CDS |
| TCTGCATTCCAACCTTCACC+GGG | 0.560515 | 6_2:+18107498 | None:intergenic |
| TCGCACCGGTTGATGCATCA+AGG | 0.560691 | 6_2:+18107099 | None:intergenic |
| GTTCATGAAATGGTCGTACA+AGG | 0.560927 | 6_2:-18108151 | Msa0911530:intron |
| GGAGCAAAATGAAGACAAGC+AGG | 0.561133 | 6_2:-18108617 | Msa0911530:CDS |
| TGACCTTGTACATGTTTCTC+CGG | 0.562567 | 6_2:-18106595 | Msa0911530:CDS |
| AAGACGCTGACTTCACTTCA+CGG | 0.564103 | 6_2:+18108746 | None:intergenic |
| TTGGGTAATGATTTGACAGA+GGG | 0.564430 | 6_2:-18107417 | Msa0911530:CDS |
| TCACGTAATGGATCAATTGG+CGG | 0.564683 | 6_2:+18106987 | None:intergenic |
| GAGAACTCTGATGTTCATGA+TGG | 0.566348 | 6_2:-18105269 | Msa0911530:CDS |
| TGAAGTCAAGTCTGATTACA+AGG | 0.566626 | 6_2:-18109038 | Msa0911530:CDS |
| TCTCAGCATCTCTTCTTCAC+AGG | 0.567425 | 6_2:+18105511 | None:intergenic |
| AAGGTAAACAGTCAGGGAGA+AGG | 0.567687 | 6_2:-18105305 | Msa0911530:CDS |
| CCCCAGTTACAAGCAGATGA+TGG | 0.568347 | 6_2:-18110369 | Msa0911530:CDS |
| AGACGCTGACTTCACTTCAC+GGG | 0.569297 | 6_2:+18108747 | None:intergenic |
| AATCAGGAGCAAGATGATCA+TGG | 0.571394 | 6_2:-18107630 | Msa0911530:CDS |
| TCAAGTGTTCAATATTCAGA+TGG | 0.571714 | 6_2:-18106015 | Msa0911530:CDS |
| AGAGTTATTGCAAGAAACAT+GGG | 0.573085 | 6_2:-18111535 | Msa0911530:CDS |
| TTCAACTAATAAAGATTATG+CGG | 0.581971 | 6_2:-18105417 | Msa0911530:CDS |
| CCATCTGAAGGAGATGACAT+TGG | 0.584045 | 6_2:-18109295 | Msa0911530:CDS |
| CCTTGTACATGTTTCTCCGG+TGG | 0.585555 | 6_2:-18106592 | Msa0911530:CDS |
| GAGAACATTGATCCCGGTGA+AGG | 0.586307 | 6_2:-18107510 | Msa0911530:CDS |
| AATTGCTAATGATTTGATGG+AGG | 0.588044 | 6_2:-18106745 | Msa0911530:CDS |
| GGATCCTGCAGCACCAAGTG+AGG | 0.589475 | 6_2:-18108590 | Msa0911530:CDS |
| TCTTCGCAAAAGACGAGTCA+TGG | 0.590226 | 6_2:-18109343 | Msa0911530:CDS |
| AATATACCTAATGCTGCCAT+GGG | 0.590333 | 6_2:+18105940 | None:intergenic |
| CCCAATTCTTCTGAAACAGA+CGG | 0.590475 | 6_2:+18107435 | None:intergenic |
| GATGAAGCTCTAAATTCAAG+TGG | 0.593816 | 6_2:-18106282 | Msa0911530:CDS |
| TTTGAACGTGTTCAACCGAA+CGG | 0.594633 | 6_2:+18108386 | None:intergenic |
| CCATCATCTGCTTGTAACTG+GGG | 0.594921 | 6_2:+18110369 | None:intergenic |
| AAGTAATTTCTCTGATGCTG+GGG | 0.597529 | 6_2:+18107740 | None:intergenic |
| CCAATGTCATCTCCTTCAGA+TGG | 0.598019 | 6_2:+18109295 | None:intergenic |
| ATGGAGAAGGTAAACAGTCA+GGG | 0.600418 | 6_2:-18105311 | Msa0911530:CDS |
| ATTCACAAAATGGTTGCCAC+AGG | 0.602754 | 6_2:-18106942 | Msa0911530:intron |
| TATCCATCAAGGATATGTCA+TGG | 0.602759 | 6_2:-18108452 | Msa0911530:CDS |
| CCACCGGAGAAACATGTACA+AGG | 0.604682 | 6_2:+18106592 | None:intergenic |
| GAGGATGAAAATATGGTGGA+CGG | 0.605123 | 6_2:-18108571 | Msa0911530:CDS |
| TCGCTGGGAATGATTCGAGC+GGG | 0.606378 | 6_2:-18110133 | Msa0911530:CDS |
| GCAAATCGACACAATGGAGA+AGG | 0.607396 | 6_2:-18105324 | Msa0911530:CDS |
| GCACCTGAAGGAGATGACAT+TGG | 0.607962 | 6_2:-18108679 | Msa0911530:CDS |
| GAGGAAGAAGTGGTAGACGT+GGG | 0.608373 | 6_2:-18106726 | Msa0911530:CDS |
| TTCTGCATAAGATCTTGAAG+AGG | 0.611280 | 6_2:+18104578 | None:intergenic |
| TAGCAACAACTGATTCATCA+GGG | 0.613947 | 6_2:+18106097 | None:intergenic |
| TGTTTACATTCGATCCATGA+GGG | 0.614124 | 6_2:+18106622 | None:intergenic |
| CATTGGATCCGTTAACGTGG+AGG | 0.617700 | 6_2:-18108662 | Msa0911530:CDS |
| GAGGTTCATGAAGATTCTAG+TGG | 0.618498 | 6_2:-18108520 | Msa0911530:CDS |
| AGATATTGAAGTTTGTGATG+TGG | 0.621540 | 6_2:-18107676 | Msa0911530:CDS |
| AAGCTGAAATCAGCACCTGA+AGG | 0.621561 | 6_2:-18108691 | Msa0911530:CDS |
| ACAGGAAAGCATGCAAATGA+GGG | 0.624755 | 6_2:-18109260 | Msa0911530:CDS |
| AAGTTGAATTCACCATCTGA+AGG | 0.625646 | 6_2:-18109307 | Msa0911530:CDS |
| AATAAAGAGAACATTGATCC+CGG | 0.625832 | 6_2:-18107516 | Msa0911530:CDS |
| CCACTATGCTAAGTAATCCA+GGG | 0.628001 | 6_2:-18107581 | Msa0911530:CDS |
| AAAGGTGAACTCGATTCCAC+CGG | 0.628154 | 6_2:+18106576 | None:intergenic |
| TATTGAAGTTTGTGATGTGG+AGG | 0.628611 | 6_2:-18107673 | Msa0911530:CDS |
| TCATTTACGATTGACCGTTG+AGG | 0.636536 | 6_2:+18106249 | None:intergenic |
| TGAAGTCAAGTCTGATCACA+AGG | 0.637217 | 6_2:-18110057 | Msa0911530:CDS |
| GTGGAGGAAAACATACAGAT+TGG | 0.638500 | 6_2:-18107657 | Msa0911530:CDS |
| ATAGACTTGGACTCAGACAG+TGG | 0.638761 | 6_2:-18110315 | Msa0911530:CDS |
| AAATGTAGATGCAAATATGG+TGG | 0.640083 | 6_2:-18109188 | Msa0911530:CDS |
| TCATCTGCTTGTAACTGGGG+TGG | 0.640796 | 6_2:+18110372 | None:intergenic |
| TCTTCACGAAAGATTAGTCA+AGG | 0.641452 | 6_2:-18108727 | Msa0911530:CDS |
| AGCGTCTTCATTCCTATCAG+CGG | 0.642072 | 6_2:+18109384 | None:intergenic |
| TGACATTGGATCCGTTAACG+TGG | 0.646418 | 6_2:-18108665 | Msa0911530:CDS |
| AGCCACATCAGTCTTCTCAT+CGG | 0.646710 | 6_2:+18108288 | None:intergenic |
| GTGGCATCAAAAGCCCTCAA+CGG | 0.647142 | 6_2:-18106263 | Msa0911530:CDS |
| TTGTTTACATTCGATCCATG+AGG | 0.647911 | 6_2:+18106621 | None:intergenic |
| GATGATAAAATTATGCATTG+TGG | 0.651559 | 6_2:-18106159 | Msa0911530:CDS |
| GGAGAAGTTGAAGTAATGAG+TGG | 0.652684 | 6_2:-18108550 | Msa0911530:CDS |
| AGCAATGAAGCTATAAACCA+AGG | 0.652795 | 6_2:-18106657 | Msa0911530:CDS |
| CCTTGATGCATCAACAGGTG+TGG | 0.654305 | 6_2:-18108317 | Msa0911530:CDS |
| AAGCATGCAAATCGACACAA+TGG | 0.657366 | 6_2:-18105330 | Msa0911530:CDS |
| GGAGGAAGAAGTGGTAGACG+TGG | 0.659152 | 6_2:-18106727 | Msa0911530:CDS |
| TGTTCAAGACACTCTAGATG+AGG | 0.660475 | 6_2:-18108266 | Msa0911530:CDS |
| AAAGACGAGTCATGGTCGAG+AGG | 0.660922 | 6_2:-18109335 | Msa0911530:CDS |
| AAGTGAGGATGAAAATATGG+TGG | 0.660997 | 6_2:-18108575 | Msa0911530:CDS |
| GCCATCAAATAATAGTAACA+TGG | 0.664524 | 6_2:+18104502 | None:intergenic |
| GATGTTTCTGAAACTGGCAA+CGG | 0.665868 | 6_2:-18106681 | Msa0911530:CDS |
| GAGGTGTTGAGTGAACAAAC+TGG | 0.667031 | 6_2:-18109154 | Msa0911530:CDS |
| TTGTTGCTAAGAATACTGAT+GGG | 0.674103 | 6_2:-18106083 | Msa0911530:CDS |
| GTTTCTCCAAAGGAATCGAG+TGG | 0.685208 | 6_2:-18107191 | Msa0911530:intron |
| ATTGGGTAATGATTTGACAG+AGG | 0.685670 | 6_2:-18107418 | Msa0911530:CDS |
| TGAATCAGACAAACTAGACG+AGG | 0.688676 | 6_2:-18109092 | Msa0911530:CDS |
| TGATGCATCAAGGCACATTG+CGG | 0.692371 | 6_2:+18108327 | None:intergenic |
| GTTTCCCCAAAGGAATCCAG+TGG | 0.693676 | 6_2:-18108409 | Msa0911530:CDS |
| GTCGCTGGGAATGATTCGAG+CGG | 0.695336 | 6_2:-18110134 | Msa0911530:CDS |
| TATGGTGGATGTAGAGCATG+AGG | 0.697900 | 6_2:-18109173 | Msa0911530:CDS |
| GAGCGATGCAAATTCAGACG+AGG | 0.701114 | 6_2:-18105183 | Msa0911530:CDS |
| TCATGGTCAAGAGAAAACGA+TGG | 0.714556 | 6_2:-18107613 | Msa0911530:CDS |
| TACCGATGAGAAGACTGATG+TGG | 0.739594 | 6_2:-18108290 | Msa0911530:CDS |
| GATGATAATGTTATGCACAG+TGG | 0.745325 | 6_2:-18106528 | Msa0911530:CDS |
| GAGTGATGAACATAAACTGG+AGG | 0.758217 | 6_2:-18110099 | Msa0911530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGATTTTTAAACAAAAA+TGG | + | chr6_2:18104958-18104977 | None:intergenic | 10.0% |
| !! | AGAAATTCATTAAATATAAA+TGG | + | chr6_2:18105908-18105927 | None:intergenic | 10.0% |
| !! | TACTATAATTATAATAAAAC+TGG | + | chr6_2:18110252-18110271 | None:intergenic | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | - | chr6_2:18110339-18110358 | Msa0911530:CDS | 10.0% |
| !!! | TTTTGTTTTGAAATTTGAAA+CGG | + | chr6_2:18104383-18104402 | None:intergenic | 15.0% |
| !!! | TTTTTTGTGAATAGAATTTT+CGG | - | chr6_2:18104756-18104775 | Msa0911530:intron | 15.0% |
| !! | AAAATTAAAACTTGACAAAA+GGG | + | chr6_2:18104810-18104829 | None:intergenic | 15.0% |
| !! | AAAAATTAAAACTTGACAAA+AGG | + | chr6_2:18104811-18104830 | None:intergenic | 15.0% |
| !!! | TTTAGTTGTTTTGATTTATA+GGG | - | chr6_2:18104839-18104858 | Msa0911530:intron | 15.0% |
| !!! | TTGAAAAAAGAATCTAAAAT+AGG | - | chr6_2:18105058-18105077 | Msa0911530:intron | 15.0% |
| !! | TATATTTCTTGATTGAAATT+AGG | - | chr6_2:18106269-18106288 | Msa0911530:CDS | 15.0% |
| !! | ATATTTCTTGATTGAAATTA+GGG | - | chr6_2:18106270-18106289 | Msa0911530:CDS | 15.0% |
| !! | CAATCTATAACTATTTATAA+AGG | - | chr6_2:18106388-18106407 | Msa0911530:CDS | 15.0% |
| !! | AAAAATGTTCAAAAAATTCA+AGG | + | chr6_2:18106635-18106654 | None:intergenic | 15.0% |
| !! | CAATCTATAAGTATTTATAA+TGG | - | chr6_2:18107177-18107196 | Msa0911530:CDS | 15.0% |
| !!! | ATCTCAAACATTTATATTTT+AGG | - | chr6_2:18107347-18107366 | Msa0911530:intron | 15.0% |
| !!! | TATGTTTTATGTATTATTTC+AGG | - | chr6_2:18108312-18108331 | Msa0911530:CDS | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | - | chr6_2:18110338-18110357 | Msa0911530:CDS | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | - | chr6_2:18110340-18110359 | Msa0911530:CDS | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | - | chr6_2:18110451-18110470 | Msa0911530:intron | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | - | chr6_2:18110452-18110471 | Msa0911530:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | + | chr6_2:18110483-18110502 | None:intergenic | 15.0% |
| !! | TGCAATAAAATATTATATCA+TGG | + | chr6_2:18110575-18110594 | None:intergenic | 15.0% |
| !!! | CTTATACAAGTTTTATAAAA+AGG | + | chr6_2:18111340-18111359 | None:intergenic | 15.0% |
| !!! | TTTTTGTGAATAGAATTTTC+GGG | - | chr6_2:18104757-18104776 | Msa0911530:intron | 20.0% |
| !!! | GTTTAGTTGTTTTGATTTAT+AGG | - | chr6_2:18104838-18104857 | Msa0911530:intron | 20.0% |
| !! | AATTAAGTTTCACATATTCT+TGG | + | chr6_2:18105281-18105300 | None:intergenic | 20.0% |
| !! | TTAATTTAATCCCTCAAATT+TGG | - | chr6_2:18105295-18105314 | Msa0911530:CDS | 20.0% |
| !!! | TTTTCAACTATTTCTAAATC+AGG | - | chr6_2:18105331-18105350 | Msa0911530:CDS | 20.0% |
| !!! | TTTCAACTATTTCTAAATCA+GGG | - | chr6_2:18105332-18105351 | Msa0911530:CDS | 20.0% |
| !!! | ATAAAGGCAATTACAATTTT+TGG | - | chr6_2:18106404-18106423 | Msa0911530:CDS | 20.0% |
| !!! | ATTGTTCTTATAACAACTTT+TGG | - | chr6_2:18106459-18106478 | Msa0911530:CDS | 20.0% |
| !!! | GAAACTTTTTTTAACATTTC+TGG | - | chr6_2:18106564-18106583 | Msa0911530:CDS | 20.0% |
| !!! | TACTTAATCCTTGATTTTAT+TGG | - | chr6_2:18106688-18106707 | Msa0911530:CDS | 20.0% |
| !! | AATTAACTCCAATAAAATCA+AGG | + | chr6_2:18106699-18106718 | None:intergenic | 20.0% |
| !! | AATTACAACAAAATCAACTA+TGG | + | chr6_2:18107305-18107324 | None:intergenic | 20.0% |
| !! | AAGAGTAAATTGAATATGAT+AGG | - | chr6_2:18108044-18108063 | Msa0911530:intron | 20.0% |
| !!! | CTTTTTAAATCATCTTATGT+GGG | + | chr6_2:18108071-18108090 | None:intergenic | 20.0% |
| !!! | ACTTTTTAAATCATCTTATG+TGG | + | chr6_2:18108072-18108091 | None:intergenic | 20.0% |
| !! | TGATAATAATTCTGTTCTAT+CGG | - | chr6_2:18109002-18109021 | Msa0911530:intron | 20.0% |
| !! | AAAACAATTAAATTTACCTG+TGG | + | chr6_2:18109217-18109236 | None:intergenic | 20.0% |
| !! | AAAAATTGCTAATGATTTGA+TGG | - | chr6_2:18109392-18109411 | Msa0911530:intron | 20.0% |
| !! | GTTAAATTATCAGAAGAATT+TGG | - | chr6_2:18109771-18109790 | Msa0911530:intron | 20.0% |
| !!! | ATGCAAAATTTTTCTTATGA+AGG | - | chr6_2:18110095-18110114 | Msa0911530:CDS | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | - | chr6_2:18110312-18110331 | Msa0911530:CDS | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | - | chr6_2:18110313-18110332 | Msa0911530:CDS | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | + | chr6_2:18110484-18110503 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | - | chr6_2:18110485-18110504 | Msa0911530:intron | 20.0% |
| !! | TTCAACTAATAAAGATTATG+CGG | - | chr6_2:18110723-18110742 | Msa0911530:intron | 20.0% |
| !!! | TTATGATTTGTGATAACTAT+TGG | - | chr6_2:18111683-18111702 | Msa0911530:five_prime_UTR | 20.0% |
| !!! | AGTTAAGAAGTTTTTGAAGA+AGG | + | chr6_2:18104434-18104453 | None:intergenic | 25.0% |
| !! | ATATTTGTAGTTGTTGTTGT+TGG | - | chr6_2:18104516-18104535 | Msa0911530:three_prime_UTR | 25.0% |
| ! | ACAGAGAGAAAAAAAAAAGA+TGG | - | chr6_2:18104552-18104571 | Msa0911530:three_prime_UTR | 25.0% |
| ! | GAATTTGAAGAACATAGAAA+TGG | - | chr6_2:18104636-18104655 | Msa0911530:CDS | 25.0% |
| ! | ATAAATCAGAGAAAGTTGTT+TGG | + | chr6_2:18104662-18104681 | None:intergenic | 25.0% |
| !! | TTTTATTGTATGAGACAAAC+AGG | - | chr6_2:18105243-18105262 | Msa0911530:CDS | 25.0% |
| ! | ATAATTCAGTGTAATCATGT+CGG | + | chr6_2:18105687-18105706 | None:intergenic | 25.0% |
| ! | AAACATTGAAGTTATAGACT+TGG | - | chr6_2:18105812-18105831 | Msa0911530:intron | 25.0% |
| ! | AGTTGTTATAAGAACAATTG+AGG | + | chr6_2:18106457-18106476 | None:intergenic | 25.0% |
| !!! | TTTTTTAACATTTCTGGATG+TGG | - | chr6_2:18106570-18106589 | Msa0911530:CDS | 25.0% |
| ! | TCAAAAAATTCAAGGATTAG+AGG | + | chr6_2:18106627-18106646 | None:intergenic | 25.0% |
| ! | ATAACAAGTAAATTGATGTG+TGG | + | chr6_2:18106659-18106678 | None:intergenic | 25.0% |
| !! | ATCTCAATCCTTTACATTTT+AGG | - | chr6_2:18106731-18106750 | Msa0911530:CDS | 25.0% |
| !! | TCTCAATCCTTTACATTTTA+GGG | - | chr6_2:18106732-18106751 | Msa0911530:CDS | 25.0% |
| ! | ATCAAATGTAGATGCAAATA+TGG | - | chr6_2:18106949-18106968 | Msa0911530:CDS | 25.0% |
| ! | TTTATAATGGCAATTACACT+TGG | - | chr6_2:18107190-18107209 | Msa0911530:intron | 25.0% |
| ! | CGATGATAATAATTGTGTTA+TGG | - | chr6_2:18107781-18107800 | Msa0911530:CDS | 25.0% |
| !! | TCATTAAATTTGGAGTTTGA+TGG | - | chr6_2:18108113-18108132 | Msa0911530:intron | 25.0% |
| ! | CAACAAGAAAATGAAATACA+GGG | + | chr6_2:18108168-18108187 | None:intergenic | 25.0% |
| ! | AATTTCTTCAACAGTCAAAT+TGG | + | chr6_2:18109085-18109104 | None:intergenic | 25.0% |
| ! | TGTTGAAGAAATTCTAGATA+CGG | - | chr6_2:18109092-18109111 | Msa0911530:CDS | 25.0% |
| !!! | TTGTTTTGCCAAATAATTCA+TGG | - | chr6_2:18109230-18109249 | Msa0911530:CDS | 25.0% |
| ! | CATTATGACCATGAATTATT+TGG | + | chr6_2:18109241-18109260 | None:intergenic | 25.0% |
| ! | TTGTGTAAAACAATGTGAAA+AGG | + | chr6_2:18109287-18109306 | None:intergenic | 25.0% |
| !! | AATATTTTCCATAGACACAT+TGG | + | chr6_2:18109727-18109746 | None:intergenic | 25.0% |
| ! | TCTTCTGATAATTTAACACT+TGG | + | chr6_2:18109768-18109787 | None:intergenic | 25.0% |
| ! | AGAAGAATTTGGTAAAAAGT+TGG | - | chr6_2:18109782-18109801 | Msa0911530:intron | 25.0% |
| !!! | GATTTCAGTTCATATTTTGA+TGG | - | chr6_2:18109942-18109961 | Msa0911530:intron | 25.0% |
| ! | GATGATAAAATTATGCATTG+TGG | - | chr6_2:18109981-18110000 | Msa0911530:intron | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | - | chr6_2:18110268-18110287 | Msa0911530:intron | 25.0% |
| ! | GTTGAAGCTTCAAATTTATT+AGG | + | chr6_2:18110709-18110728 | None:intergenic | 25.0% |
| ! | AGAACAAAATCAATCTGATA+CGG | - | chr6_2:18110915-18110934 | Msa0911530:intron | 25.0% |
| !!! | CATTCAATATACGTTTTAAG+TGG | - | chr6_2:18111100-18111119 | Msa0911530:intron | 25.0% |
| !!! | TTTCTGAAAACTGTTTTCAA+AGG | - | chr6_2:18111222-18111241 | Msa0911530:intron | 25.0% |
| ! | ACGAAAATTGTGGAAAATAT+TGG | - | chr6_2:18111251-18111270 | Msa0911530:intron | 25.0% |
| ! | ATGTTCTCTTTATGTATCAT+TGG | + | chr6_2:18111478-18111497 | None:intergenic | 25.0% |
| ! | GAACATTAAATTTGACAAGA+AGG | - | chr6_2:18111492-18111511 | Msa0911530:CDS | 25.0% |
| !!! | TTTTTAGTATGTGTAGTGTT+GGG | - | chr6_2:18111591-18111610 | Msa0911530:exon | 25.0% |
| ! | ACCATGTTACTATTATTTGA+TGG | - | chr6_2:18111637-18111656 | Msa0911530:five_prime_UTR | 25.0% |
| AATTGTAAGGTTTGTGGATT+TGG | + | chr6_2:18104406-18104425 | None:intergenic | 30.0% | |
| TTTCTGTGTTTCAAATTCGT+GGG | + | chr6_2:18104497-18104516 | None:intergenic | 30.0% | |
| ATTTCTGTGTTTCAAATTCG+TGG | + | chr6_2:18104498-18104517 | None:intergenic | 30.0% | |
| AGAGTTATTGCAAGAAACAT+GGG | - | chr6_2:18104605-18104624 | Msa0911530:CDS | 30.0% | |
| ACAACTTTCTCTGATTTATC+AGG | - | chr6_2:18104663-18104682 | Msa0911530:CDS | 30.0% | |
| !! | AGTCTAGATCTGTTTGTTTT+TGG | - | chr6_2:18105008-18105027 | Msa0911530:intron | 30.0% |
| AAGTTTCACATATTCTTGGA+GGG | + | chr6_2:18105277-18105296 | None:intergenic | 30.0% | |
| TAAGTTTCACATATTCTTGG+AGG | + | chr6_2:18105278-18105297 | None:intergenic | 30.0% | |
| CCTAATAAGTCCAAATTTGA+GGG | + | chr6_2:18105308-18105327 | None:intergenic | 30.0% | |
| AGGGACTTATTAAACTATTG+TGG | - | chr6_2:18105351-18105370 | Msa0911530:CDS | 30.0% | |
| ! | TTTTTGAACACATTGTTTCC+TGG | - | chr6_2:18105453-18105472 | Msa0911530:CDS | 30.0% |
| ! | TTTTGAACACATTGTTTCCT+GGG | - | chr6_2:18105454-18105473 | Msa0911530:CDS | 30.0% |
| !!! | AATATAGTATTTTAGTCCCC+AGG | + | chr6_2:18105474-18105493 | None:intergenic | 30.0% |
| !! | ACATTTTCAATCAGAAGTGT+CGG | + | chr6_2:18105531-18105550 | None:intergenic | 30.0% |
| TTCTGTTTAATTATGCACAC+AGG | - | chr6_2:18105722-18105741 | Msa0911530:intron | 30.0% | |
| TCTGTTTAATTATGCACACA+GGG | - | chr6_2:18105723-18105742 | Msa0911530:intron | 30.0% | |
| TTTATGTTCATCACTCAAGT+TGG | + | chr6_2:18106037-18106056 | None:intergenic | 30.0% | |
| !!! | CGATCTTTGTTTTCTTAGTT+CGG | - | chr6_2:18106210-18106229 | Msa0911530:CDS | 30.0% |
| AGATTACAAACAGTTGAGTA+TGG | + | chr6_2:18106367-18106386 | None:intergenic | 30.0% | |
| GGAGAAAAATGAAGATAATC+AGG | - | chr6_2:18106910-18106929 | Msa0911530:intron | 30.0% | |
| AAATGTAGATGCAAATATGG+TGG | - | chr6_2:18106952-18106971 | Msa0911530:CDS | 30.0% | |
| GGAGTAGTTAAAATTTGATC+TGG | + | chr6_2:18107076-18107095 | None:intergenic | 30.0% | |
| TATCTTGTACACCTTGATAT+AGG | - | chr6_2:18107273-18107292 | Msa0911530:intron | 30.0% | |
| !!! | TCTAGTTTTGAAGATTCTGA+CGG | - | chr6_2:18107905-18107924 | Msa0911530:intron | 30.0% |
| TACTCTTCACACAGATATTT+GGG | + | chr6_2:18108031-18108050 | None:intergenic | 30.0% | |
| TTACTCTTCACACAGATATT+TGG | + | chr6_2:18108032-18108051 | None:intergenic | 30.0% | |
| CCAACAAGAAAATGAAATAC+AGG | + | chr6_2:18108169-18108188 | None:intergenic | 30.0% | |
| ! | CCTGTATTTCATTTTCTTGT+TGG | - | chr6_2:18108166-18108185 | Msa0911530:CDS | 30.0% |
| TCACAAACTTCAATATCTCT+TGG | + | chr6_2:18108462-18108481 | None:intergenic | 30.0% | |
| AGATATTGAAGTTTGTGATG+TGG | - | chr6_2:18108464-18108483 | Msa0911530:CDS | 30.0% | |
| AATAAAGAGAACATTGATCC+CGG | - | chr6_2:18108624-18108643 | Msa0911530:CDS | 30.0% | |
| ATAGATCTTCAAGATGTTTG+TGG | - | chr6_2:18108771-18108790 | Msa0911530:CDS | 30.0% | |
| TGTGAAGTTGTTCAACAAAA+CGG | + | chr6_2:18108975-18108994 | None:intergenic | 30.0% | |
| TGTTGAACAACTTCACAAAT+TGG | - | chr6_2:18108978-18108997 | Msa0911530:intron | 30.0% | |
| !! | TGATCTTGCTATTCACAAAA+TGG | - | chr6_2:18109188-18109207 | Msa0911530:CDS | 30.0% |
| GAGCAGTGTATATAATATCA+AGG | + | chr6_2:18109332-18109351 | None:intergenic | 30.0% | |
| AATTGCTAATGATTTGATGG+AGG | - | chr6_2:18109395-18109414 | Msa0911530:intron | 30.0% | |
| AATCTTCTACATGATGCTTT+AGG | - | chr6_2:18109918-18109937 | Msa0911530:intron | 30.0% | |
| ATCTTCTACATGATGCTTTA+GGG | - | chr6_2:18109919-18109938 | Msa0911530:intron | 30.0% | |
| AAAATTATGCATTGTGGATC+TGG | - | chr6_2:18109987-18110006 | Msa0911530:intron | 30.0% | |
| TTGTTGCTAAGAATACTGAT+GGG | - | chr6_2:18110057-18110076 | Msa0911530:CDS | 30.0% | |
| TCAAGTGTTCAATATTCAGA+TGG | - | chr6_2:18110125-18110144 | Msa0911530:CDS | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | + | chr6_2:18110439-18110458 | None:intergenic | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | + | chr6_2:18110440-18110459 | None:intergenic | 30.0% | |
| ATCATCAGAAAAGACATGTA+TGG | - | chr6_2:18110651-18110670 | Msa0911530:intron | 30.0% | |
| !!! | TGTTTTGATCCAAATACACT+TGG | - | chr6_2:18110754-18110773 | Msa0911530:intron | 30.0% |
| !! | AACTCCATTTGATTAGTTTG+AGG | + | chr6_2:18110988-18111007 | None:intergenic | 30.0% |
| ! | TGAAATTTTATTGCCTTGTC+AGG | - | chr6_2:18111133-18111152 | Msa0911530:intron | 30.0% |
| ! | GAAATTTTATTGCCTTGTCA+GGG | - | chr6_2:18111134-18111153 | Msa0911530:intron | 30.0% |
| GAAGCAGTTTCTATAAATCA+AGG | + | chr6_2:18111403-18111422 | None:intergenic | 30.0% | |
| TGATTTATAGAAACTGCTTC+TGG | - | chr6_2:18111403-18111422 | Msa0911530:intron | 30.0% | |
| AGATGCTTATCAAAAGAAGT+TGG | - | chr6_2:18111432-18111451 | Msa0911530:intron | 30.0% | |
| !! | CTTTTTAGTATGTGTAGTGT+TGG | - | chr6_2:18111590-18111609 | Msa0911530:exon | 30.0% |
| GCCATCAAATAATAGTAACA+TGG | + | chr6_2:18111641-18111660 | None:intergenic | 30.0% | |
| ACTTCCAATACTAAAAAGCA+TGG | + | chr6_2:18111663-18111682 | None:intergenic | 30.0% | |
| ! | GTTCTGAATTGTAAGGTTTG+TGG | + | chr6_2:18104412-18104431 | None:intergenic | 35.0% |
| !! | GAAGAAGGTTCTGAATTGTA+AGG | + | chr6_2:18104419-18104438 | None:intergenic | 35.0% |
| ! | GTTTTTGTCAGAGAATTCGT+GGG | + | chr6_2:18104461-18104480 | None:intergenic | 35.0% |
| !! | TGTTTTTGTCAGAGAATTCG+TGG | + | chr6_2:18104462-18104481 | None:intergenic | 35.0% |
| ! | TAGTTGTTGTTGTTGGTGTT+TGG | - | chr6_2:18104523-18104542 | Msa0911530:three_prime_UTR | 35.0% |
| CAGAGTTATTGCAAGAAACA+TGG | - | chr6_2:18104604-18104623 | Msa0911530:CDS | 35.0% | |
| TCTATGTTCTTCAAATTCGC+TGG | + | chr6_2:18104634-18104653 | None:intergenic | 35.0% | |
| CCCTCAAATTTGGACTTATT+AGG | - | chr6_2:18105305-18105324 | Msa0911530:CDS | 35.0% | |
| GCCTAATAAGTCCAAATTTG+AGG | + | chr6_2:18105309-18105328 | None:intergenic | 35.0% | |
| ! | TAATGACATGTGTTCTGAGT+TGG | - | chr6_2:18105404-18105423 | Msa0911530:CDS | 35.0% |
| TTTGAACACATTGTTTCCTG+GGG | - | chr6_2:18105455-18105474 | Msa0911530:CDS | 35.0% | |
| TTCTGATTGAAAATGTGTCC+CGG | - | chr6_2:18105535-18105554 | Msa0911530:intron | 35.0% | |
| GATGTTCAAATTGAAGCTTC+AGG | - | chr6_2:18105855-18105874 | Msa0911530:intron | 35.0% | |
| ! | TTTTTCATAGATACTGTCGC+TGG | - | chr6_2:18105991-18106010 | Msa0911530:CDS | 35.0% |
| ! | TTTTCATAGATACTGTCGCT+GGG | - | chr6_2:18105992-18106011 | Msa0911530:CDS | 35.0% |
| CTTGAGTGATGAACATAAAC+TGG | - | chr6_2:18106038-18106057 | Msa0911530:CDS | 35.0% | |
| ACTTTACTTGCTCTATAGGT+AGG | + | chr6_2:18106245-18106264 | None:intergenic | 35.0% | |
| CTGAACTTTACTTGCTCTAT+AGG | + | chr6_2:18106249-18106268 | None:intergenic | 35.0% | |
| AAGTTGAATTCACCATCTGA+AGG | - | chr6_2:18106833-18106852 | Msa0911530:intron | 35.0% | |
| CATTGGATCTGTTAACATAC+AGG | - | chr6_2:18106862-18106881 | Msa0911530:intron | 35.0% | |
| TGAAGTCAAGTCTGATTACA+AGG | - | chr6_2:18107102-18107121 | Msa0911530:CDS | 35.0% | |
| ! | TCTGATTACAAGGTTGATTC+AGG | - | chr6_2:18107112-18107131 | Msa0911530:CDS | 35.0% |
| !! | TATATTTTAGGCACTGCTGA+TGG | - | chr6_2:18107359-18107378 | Msa0911530:intron | 35.0% |
| ! | TCTTCACGAAAGATTAGTCA+AGG | - | chr6_2:18107413-18107432 | Msa0911530:CDS | 35.0% |
| AAATGAAGACAAGCAGGAAT+TGG | - | chr6_2:18107529-18107548 | Msa0911530:CDS | 35.0% | |
| ACCAAGTGAGGATGAAAATA+TGG | - | chr6_2:18107562-18107581 | Msa0911530:CDS | 35.0% | |
| ! | ACCATATTTTCATCCTCACT+TGG | + | chr6_2:18107566-18107585 | None:intergenic | 35.0% |
| AAGTGAGGATGAAAATATGG+TGG | - | chr6_2:18107565-18107584 | Msa0911530:CDS | 35.0% | |
| AGTAATGAGTGGAAAAACTG+AGG | - | chr6_2:18107601-18107620 | Msa0911530:CDS | 35.0% | |
| GATCAGATCAATATCCATCA+AGG | - | chr6_2:18107677-18107696 | Msa0911530:CDS | 35.0% | |
| TATCCATCAAGGATATGTCA+TGG | - | chr6_2:18107688-18107707 | Msa0911530:CDS | 35.0% | |
| TTCCTTAAATGTTTCCCCAA+AGG | - | chr6_2:18107721-18107740 | Msa0911530:CDS | 35.0% | |
| ! | TTCCTTTGGGGAAACATTTA+AGG | + | chr6_2:18107726-18107745 | None:intergenic | 35.0% |
| !!! | CTAGTTTTGAAGATTCTGAC+GGG | - | chr6_2:18107906-18107925 | Msa0911530:intron | 35.0% |
| ! | ACTTCATTTGATGGATCAGT+AGG | + | chr6_2:18107950-18107969 | None:intergenic | 35.0% |
| TGATCTCGAAGTTCATGAAA+TGG | - | chr6_2:18107979-18107998 | Msa0911530:intron | 35.0% | |
| ACTCTTCACACAGATATTTG+GGG | + | chr6_2:18108030-18108049 | None:intergenic | 35.0% | |
| TTACAAATCATGCAAGTGCT+CGG | + | chr6_2:18108233-18108252 | None:intergenic | 35.0% | |
| ACTAATAATGCAGCTACAAG+TGG | - | chr6_2:18108342-18108361 | Msa0911530:CDS | 35.0% | |
| AAGTAATTTCTCTGATGCTG+GGG | + | chr6_2:18108403-18108422 | None:intergenic | 35.0% | |
| CAAGTAATTTCTCTGATGCT+GGG | + | chr6_2:18108404-18108423 | None:intergenic | 35.0% | |
| TATTGAAGTTTGTGATGTGG+AGG | - | chr6_2:18108467-18108486 | Msa0911530:CDS | 35.0% | |
| !! | CATACAGATTGGTGTTAATC+AGG | - | chr6_2:18108494-18108513 | Msa0911530:CDS | 35.0% |
| CAATGTTCTCTTTATTGGCA+TGG | + | chr6_2:18108620-18108639 | None:intergenic | 35.0% | |
| GGGATCAATGTTCTCTTTAT+TGG | + | chr6_2:18108625-18108644 | None:intergenic | 35.0% | |
| ATTGGGTAATGATTTGACAG+AGG | - | chr6_2:18108722-18108741 | Msa0911530:CDS | 35.0% | |
| TTGGGTAATGATTTGACAGA+GGG | - | chr6_2:18108723-18108742 | Msa0911530:CDS | 35.0% | |
| ! | ATTCCTTTGGAGAAACATGA+GGG | + | chr6_2:18108945-18108964 | None:intergenic | 35.0% |
| ! | CTCATCAATATTTTTCGCAC+CGG | + | chr6_2:18109058-18109077 | None:intergenic | 35.0% |
| !! | ACTTCACGTAATGGATCAAT+TGG | + | chr6_2:18109159-18109178 | None:intergenic | 35.0% |
| TTAGTCTCAACTTCACGTAA+TGG | + | chr6_2:18109168-18109187 | None:intergenic | 35.0% | |
| !! | GTTGAAGATGTTTCTGAAAC+TGG | - | chr6_2:18109453-18109472 | Msa0911530:intron | 35.0% |
| AGCAATGAAGCTATAAACCA+AGG | - | chr6_2:18109483-18109502 | Msa0911530:intron | 35.0% | |
| TGTTTACATTCGATCCATGA+GGG | + | chr6_2:18109521-18109540 | None:intergenic | 35.0% | |
| TTGTTTACATTCGATCCATG+AGG | + | chr6_2:18109522-18109541 | None:intergenic | 35.0% | |
| ! | GATGATAATGTTATGCACAG+TGG | - | chr6_2:18109612-18109631 | Msa0911530:intron | 35.0% |
| AATCTCGGAAATTGTGGATT+TGG | - | chr6_2:18109642-18109661 | Msa0911530:intron | 35.0% | |
| TGCAAAAACCAATGTGTCTA+TGG | - | chr6_2:18109716-18109735 | Msa0911530:intron | 35.0% | |
| TTTCACAGTCATCTTCAAGA+AGG | + | chr6_2:18109824-18109843 | None:intergenic | 35.0% | |
| !! | GATGAAGCTCTAAATTCAAG+TGG | - | chr6_2:18109858-18109877 | Msa0911530:intron | 35.0% |
| TCTTCTACATGATGCTTTAG+GGG | - | chr6_2:18109920-18109939 | Msa0911530:intron | 35.0% | |
| TGATTCATCAGGGAAACAAA+AGG | + | chr6_2:18110036-18110055 | None:intergenic | 35.0% | |
| ! | TAGCAACAACTGATTCATCA+GGG | + | chr6_2:18110046-18110065 | None:intergenic | 35.0% |
| ! | TTAGCAACAACTGATTCATC+AGG | + | chr6_2:18110047-18110066 | None:intergenic | 35.0% |
| GTTGTTGCTAAGAATACTGA+TGG | - | chr6_2:18110056-18110075 | Msa0911530:CDS | 35.0% | |
| TTCTAGTAGTACTTATCCCA+TGG | - | chr6_2:18110184-18110203 | Msa0911530:intron | 35.0% | |
| AATATACCTAATGCTGCCAT+GGG | + | chr6_2:18110203-18110222 | None:intergenic | 35.0% | |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | - | chr6_2:18110316-18110335 | Msa0911530:CDS | 35.0% |
| AAGAATAAATAGGGGAGAGA+AGG | - | chr6_2:18110348-18110367 | Msa0911530:CDS | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | - | chr6_2:18110349-18110368 | Msa0911530:CDS | 35.0% | |
| !!! | ATGTATGGTTTTAGATCCTG+AGG | - | chr6_2:18110666-18110685 | Msa0911530:intron | 35.0% |
| ACAACATCTCCAAGTGTATT+TGG | + | chr6_2:18110766-18110785 | None:intergenic | 35.0% | |
| TACACTTGGAGATGTTGTTA+TGG | - | chr6_2:18110768-18110787 | Msa0911530:intron | 35.0% | |
| TCTGATGTTCATGATGGTAT+TGG | - | chr6_2:18110877-18110896 | Msa0911530:intron | 35.0% | |
| AGTGCCTCAAACTAATCAAA+TGG | - | chr6_2:18110981-18111000 | Msa0911530:intron | 35.0% | |
| ! | CTTCAACAACTTTTTGCTTC+AGG | - | chr6_2:18111021-18111040 | Msa0911530:intron | 35.0% |
| ATGCATTAGCACTTGAATAG+AGG | + | chr6_2:18111083-18111102 | None:intergenic | 35.0% | |
| CAATTTAATAGACCCTGACA+AGG | + | chr6_2:18111149-18111168 | None:intergenic | 35.0% | |
| AAGGCTGTAAACGAAAATTG+TGG | - | chr6_2:18111241-18111260 | Msa0911530:intron | 35.0% | |
| GATAATGAAAACCAGACACA+TGG | - | chr6_2:18111304-18111323 | Msa0911530:intron | 35.0% | |
| ATAAGCGACTGTTTCGATAT+AGG | - | chr6_2:18111355-18111374 | Msa0911530:intron | 35.0% | |
| TTTGACAAGAAGGATGAAGT+TGG | - | chr6_2:18111502-18111521 | Msa0911530:CDS | 35.0% | |
| TTCTGCATAAGATCTTGAAG+AGG | + | chr6_2:18111565-18111584 | None:intergenic | 35.0% | |
| !! | ATGGCCATGCTTTTTAGTAT+TGG | - | chr6_2:18111656-18111675 | Msa0911530:five_prime_UTR | 35.0% |
| TCAAATTCGTGGGAACAAGA+AGG | + | chr6_2:18104487-18104506 | None:intergenic | 40.0% | |
| ACACAAAACATGTCAGACAC+CGG | + | chr6_2:18105557-18105576 | None:intergenic | 40.0% | |
| GTAATCACAAGTGTCAGTGT+CGG | + | chr6_2:18105580-18105599 | None:intergenic | 40.0% | |
| GAGTGATGAACATAAACTGG+AGG | - | chr6_2:18106041-18106060 | Msa0911530:CDS | 40.0% | |
| TGAAGTCAAGTCTGATCACA+AGG | - | chr6_2:18106083-18106102 | Msa0911530:CDS | 40.0% | |
| ! | TCTGATCACAAGGTTGATTC+AGG | - | chr6_2:18106093-18106112 | Msa0911530:CDS | 40.0% |
| ! | TGTTTTCTTAGTTCGGCCAA+TGG | - | chr6_2:18106217-18106236 | Msa0911530:CDS | 40.0% |
| AGTATGGCTCAATCAAGGTA+CGG | + | chr6_2:18106351-18106370 | None:intergenic | 40.0% | |
| AGTTGAGTATGGCTCAATCA+AGG | + | chr6_2:18106356-18106375 | None:intergenic | 40.0% | |
| ! | TACAGGAAAGCATGCAAATG+AGG | - | chr6_2:18106879-18106898 | Msa0911530:intron | 40.0% |
| ! | ACAGGAAAGCATGCAAATGA+GGG | - | chr6_2:18106880-18106899 | Msa0911530:intron | 40.0% |
| CATGCAAATGAGGGTCAATA+AGG | - | chr6_2:18106889-18106908 | Msa0911530:intron | 40.0% | |
| !! | GCATCTACATTTGATGATGC+AGG | + | chr6_2:18106944-18106963 | None:intergenic | 40.0% |
| ACGAGCGTAACTGAAAAAGT+TGG | - | chr6_2:18107022-18107041 | Msa0911530:CDS | 40.0% | |
| TGAATCAGACAAACTAGACG+AGG | - | chr6_2:18107048-18107067 | Msa0911530:CDS | 40.0% | |
| TCAGACTTGACTTCACTTAG+TGG | + | chr6_2:18107097-18107116 | None:intergenic | 40.0% | |
| TATGGCACTTGCCTATATCA+AGG | + | chr6_2:18107287-18107306 | None:intergenic | 40.0% | |
| !! | TTTGCAAATGAGTGTCGATC+AGG | - | chr6_2:18107502-18107521 | Msa0911530:CDS | 40.0% |
| ! | GAGGATGAAAATATGGTGGA+CGG | - | chr6_2:18107569-18107588 | Msa0911530:CDS | 40.0% |
| GGAGAAGTTGAAGTAATGAG+TGG | - | chr6_2:18107590-18107609 | Msa0911530:CDS | 40.0% | |
| GAGGTTCATGAAGATTCTAG+TGG | - | chr6_2:18107620-18107639 | Msa0911530:CDS | 40.0% | |
| TTTGAACGTGTTCAACCGAA+CGG | + | chr6_2:18107757-18107776 | None:intergenic | 40.0% | |
| TGTTCAAGACACTCTAGATG+AGG | - | chr6_2:18107874-18107893 | Msa0911530:intron | 40.0% | |
| CTCGTCTCTACTTCATTTGA+TGG | + | chr6_2:18107959-18107978 | None:intergenic | 40.0% | |
| GTTCATGAAATGGTCGTACA+AGG | - | chr6_2:18107989-18108008 | Msa0911530:intron | 40.0% | |
| GATTCTGCTATGCAGCTATA+TGG | + | chr6_2:18108144-18108163 | None:intergenic | 40.0% | |
| CCAAGTAATTTCTCTGATGC+TGG | + | chr6_2:18108405-18108424 | None:intergenic | 40.0% | |
| CCAGCATCAGAGAAATTACT+TGG | - | chr6_2:18108402-18108421 | Msa0911530:CDS | 40.0% | |
| GTGGAGGAAAACATACAGAT+TGG | - | chr6_2:18108483-18108502 | Msa0911530:CDS | 40.0% | |
| AATCAGGAGCAAGATGATCA+TGG | - | chr6_2:18108510-18108529 | Msa0911530:CDS | 40.0% | |
| TCATGGTCAAGAGAAAACGA+TGG | - | chr6_2:18108527-18108546 | Msa0911530:CDS | 40.0% | |
| CCTGGATTACTTAGCATAGT+GGG | + | chr6_2:18108561-18108580 | None:intergenic | 40.0% | |
| CCACTATGCTAAGTAATCCA+GGG | - | chr6_2:18108559-18108578 | Msa0911530:CDS | 40.0% | |
| TCCGTCTGTTTCAGAAGAAT+TGG | - | chr6_2:18108704-18108723 | Msa0911530:CDS | 40.0% | |
| !! | CCCAATTCTTCTGAAACAGA+CGG | + | chr6_2:18108708-18108727 | None:intergenic | 40.0% |
| CCGTCTGTTTCAGAAGAATT+GGG | - | chr6_2:18108705-18108724 | Msa0911530:CDS | 40.0% | |
| CTTCAAGATGTTTGTGGAAG+TGG | - | chr6_2:18108777-18108796 | Msa0911530:intron | 40.0% | |
| ! | GATTCCTTTGGAGAAACATG+AGG | + | chr6_2:18108946-18108965 | None:intergenic | 40.0% |
| !! | TCACGTAATGGATCAATTGG+CGG | + | chr6_2:18109156-18109175 | None:intergenic | 40.0% |
| ATTCACAAAATGGTTGCCAC+AGG | - | chr6_2:18109198-18109217 | Msa0911530:CDS | 40.0% | |
| TGATTTGATGGAGGAAGAAG+TGG | - | chr6_2:18109404-18109423 | Msa0911530:intron | 40.0% | |
| !! | GATGTTTCTGAAACTGGCAA+CGG | - | chr6_2:18109459-18109478 | Msa0911530:intron | 40.0% |
| TGACCTTGTACATGTTTCTC+CGG | - | chr6_2:18109545-18109564 | Msa0911530:intron | 40.0% | |
| ! | GAATCGAGTTCACCTTTTGT+TGG | - | chr6_2:18109570-18109589 | Msa0911530:intron | 40.0% |
| TGAACTTGTCCACCAACAAA+AGG | + | chr6_2:18109585-18109604 | None:intergenic | 40.0% | |
| GACTACAATCTCGGAAATTG+TGG | - | chr6_2:18109636-18109655 | Msa0911530:intron | 40.0% | |
| ! | GGTTTTTGCATCAGTATCCT+CGG | + | chr6_2:18109706-18109725 | None:intergenic | 40.0% |
| GGTAAAAAGTTGGCAGAAGT+AGG | - | chr6_2:18109792-18109811 | Msa0911530:intron | 40.0% | |
| CATTTACGATTGACCGTTGA+GGG | + | chr6_2:18109893-18109912 | None:intergenic | 40.0% | |
| TCATTTACGATTGACCGTTG+AGG | + | chr6_2:18109894-18109913 | None:intergenic | 40.0% | |
| GGATCTGGAAAAAGTGAATC+TGG | - | chr6_2:18110002-18110021 | Msa0911530:intron | 40.0% | |
| CACGATCTATTTGTGACAAC+TGG | - | chr6_2:18110152-18110171 | Msa0911530:intron | 40.0% | |
| CAATATACCTAATGCTGCCA+TGG | + | chr6_2:18110204-18110223 | None:intergenic | 40.0% | |
| GCATCTGCATTGGAAGATAA+AGG | + | chr6_2:18110610-18110629 | None:intergenic | 40.0% | |
| AAGCATGCAAATCGACACAA+TGG | - | chr6_2:18110810-18110829 | Msa0911530:intron | 40.0% | |
| AATGGAGAAGGTAAACAGTC+AGG | - | chr6_2:18110828-18110847 | Msa0911530:intron | 40.0% | |
| ATGGAGAAGGTAAACAGTCA+GGG | - | chr6_2:18110829-18110848 | Msa0911530:intron | 40.0% | |
| GAGAACTCTGATGTTCATGA+TGG | - | chr6_2:18110871-18110890 | Msa0911530:intron | 40.0% | |
| ! | GATGTTCATGATGGTATTGG+TGG | - | chr6_2:18110880-18110899 | Msa0911530:intron | 40.0% |
| ATCATTGGTGTAGCCTTTGA+TGG | + | chr6_2:18111463-18111482 | None:intergenic | 40.0% | |
| AAGTTGGATCAGTGATGTCT+AGG | - | chr6_2:18111518-18111537 | Msa0911530:CDS | 40.0% | |
| ACATATTCTTGGAGGGAGTG+AGG | + | chr6_2:18105270-18105289 | None:intergenic | 45.0% | |
| CACAAAACATGTCAGACACC+GGG | + | chr6_2:18105556-18105575 | None:intergenic | 45.0% | |
| GTGTAATCATGTCGGACACT+GGG | + | chr6_2:18105679-18105698 | None:intergenic | 45.0% | |
| AGTGTAATCATGTCGGACAC+TGG | + | chr6_2:18105680-18105699 | None:intergenic | 45.0% | |
| CCATCATCTGCTTGTAACTG+GGG | + | chr6_2:18105774-18105793 | None:intergenic | 45.0% | |
| GCCATCATCTGCTTGTAACT+GGG | + | chr6_2:18105775-18105794 | None:intergenic | 45.0% | |
| TGCCATCATCTGCTTGTAAC+TGG | + | chr6_2:18105776-18105795 | None:intergenic | 45.0% | |
| ATAGACTTGGACTCAGACAG+TGG | - | chr6_2:18105825-18105844 | Msa0911530:intron | 45.0% | |
| TCAATCAAGGTACGGCTAAG+GGG | + | chr6_2:18106343-18106362 | None:intergenic | 45.0% | |
| CTCAATCAAGGTACGGCTAA+GGG | + | chr6_2:18106344-18106363 | None:intergenic | 45.0% | |
| CAGCGGACCCTAAAATGTAA+AGG | + | chr6_2:18106742-18106761 | None:intergenic | 45.0% | |
| !!! | ACATTTTAGGGTCCGCTGAT+AGG | - | chr6_2:18106744-18106763 | Msa0911530:CDS | 45.0% |
| AGCGTCTTCATTCCTATCAG+CGG | + | chr6_2:18106759-18106778 | None:intergenic | 45.0% | |
| TCTTCGCAAAAGACGAGTCA+TGG | - | chr6_2:18106797-18106816 | Msa0911530:intron | 45.0% | |
| CCAATGTCATCTCCTTCAGA+TGG | + | chr6_2:18106848-18106867 | None:intergenic | 45.0% | |
| CCATCTGAAGGAGATGACAT+TGG | - | chr6_2:18106845-18106864 | Msa0911530:intron | 45.0% | |
| !! | TATGGTGGATGTAGAGCATG+AGG | - | chr6_2:18106967-18106986 | Msa0911530:CDS | 45.0% |
| !! | GAGGTGTTGAGTGAACAAAC+TGG | - | chr6_2:18106986-18107005 | Msa0911530:CDS | 45.0% |
| !! | AAGACGCTGACTTCACTTCA+CGG | + | chr6_2:18107397-18107416 | None:intergenic | 45.0% |
| AAGCTGAAATCAGCACCTGA+AGG | - | chr6_2:18107449-18107468 | Msa0911530:CDS | 45.0% | |
| GATCCAATGTCATCTCCTTC+AGG | + | chr6_2:18106851-18106870 | None:intergenic | 45.0% | |
| TGACATTGGATCCGTTAACG+TGG | - | chr6_2:18107475-18107494 | Msa0911530:CDS | 45.0% | |
| TTGCAAAGCCTCCACGTTAA+CGG | + | chr6_2:18107489-18107508 | None:intergenic | 45.0% | |
| GGAGCAAAATGAAGACAAGC+AGG | - | chr6_2:18107523-18107542 | Msa0911530:CDS | 45.0% | |
| GCTCCATGACATATCCTTGA+TGG | + | chr6_2:18107694-18107713 | None:intergenic | 45.0% | |
| TGATGCATCAAGGCACATTG+CGG | + | chr6_2:18107816-18107835 | None:intergenic | 45.0% | |
| ATGTGCCTTGATGCATCAAC+AGG | - | chr6_2:18107818-18107837 | Msa0911530:intron | 45.0% | |
| TACCGATGAGAAGACTGATG+TGG | - | chr6_2:18107850-18107869 | Msa0911530:intron | 45.0% | |
| AGCCACATCAGTCTTCTCAT+CGG | + | chr6_2:18107855-18107874 | None:intergenic | 45.0% | |
| TCAGTAGGCAGAACTTGAAC+TGG | + | chr6_2:18107935-18107954 | None:intergenic | 45.0% | |
| CCCACTATGCTAAGTAATCC+AGG | - | chr6_2:18108558-18108577 | Msa0911530:CDS | 45.0% | |
| CCCTGGATTACTTAGCATAG+TGG | + | chr6_2:18108562-18108581 | None:intergenic | 45.0% | |
| TTCTGCATTCCAACCTTCAC+CGG | + | chr6_2:18108646-18108665 | None:intergenic | 45.0% | |
| TCGTTCATGTCAACTGCACT+AGG | + | chr6_2:18108669-18108688 | None:intergenic | 45.0% | |
| ACAGAGGGACAAGTTGCAAA+CGG | - | chr6_2:18108738-18108757 | Msa0911530:CDS | 45.0% | |
| TAGCCCTCATGTTTCTCCAA+AGG | - | chr6_2:18108939-18108958 | Msa0911530:intron | 45.0% | |
| GTTTCTCCAAAGGAATCGAG+TGG | - | chr6_2:18108949-18108968 | Msa0911530:intron | 45.0% | |
| AAAGGTGAACTCGATTCCAC+CGG | + | chr6_2:18109567-18109586 | None:intergenic | 45.0% | |
| ! | TCGAGTTCACCTTTTGTTGG+TGG | - | chr6_2:18109573-18109592 | Msa0911530:intron | 45.0% |
| CACAGTGGAGACTACAATCT+CGG | - | chr6_2:18109627-18109646 | Msa0911530:intron | 45.0% | |
| TGATAAATCCATTGCTGCCG+AGG | - | chr6_2:18109686-18109705 | Msa0911530:intron | 45.0% | |
| ! | CTTGGTGCATGACTCTCATA+TGG | + | chr6_2:18109750-18109769 | None:intergenic | 45.0% |
| ACTTATCCCATGGCAGCATT+AGG | - | chr6_2:18110194-18110213 | Msa0911530:intron | 45.0% | |
| ATCTGAGGATTTGACTGGGA+AGG | - | chr6_2:18110385-18110404 | Msa0911530:CDS | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | - | chr6_2:18110386-18110405 | Msa0911530:CDS | 45.0% | |
| TTCTTCACAGGCATCTGCAT+TGG | + | chr6_2:18110620-18110639 | None:intergenic | 45.0% | |
| TCTCAGCATCTCTTCTTCAC+AGG | + | chr6_2:18110632-18110651 | None:intergenic | 45.0% | |
| ! | TTAGATCCTGAGGAGTGCAT+TGG | - | chr6_2:18110676-18110695 | Msa0911530:intron | 45.0% |
| GAAAATCCAATGCACTCCTC+AGG | + | chr6_2:18110685-18110704 | None:intergenic | 45.0% | |
| GCAAATCGACACAATGGAGA+AGG | - | chr6_2:18110816-18110835 | Msa0911530:intron | 45.0% | |
| AAGGTAAACAGTCAGGGAGA+AGG | - | chr6_2:18110835-18110854 | Msa0911530:intron | 45.0% | |
| !! | CATGATGGTATTGGTGGAGT+TGG | - | chr6_2:18110886-18110905 | Msa0911530:intron | 45.0% |
| ATCAATCTGATACGGTGAGC+CGG | - | chr6_2:18110923-18110942 | Msa0911530:intron | 45.0% | |
| ! | CATCGCTCCTTTTCCTTTTC+CGG | + | chr6_2:18110945-18110964 | None:intergenic | 45.0% |
| !! | TACGTTTTAAGTGGCTGCTG+TGG | - | chr6_2:18111109-18111128 | Msa0911530:intron | 45.0% |
| GAAGTTGGACTCACCATCAA+AGG | - | chr6_2:18111447-18111466 | Msa0911530:intron | 45.0% | |
| !!! | TTTATTTTTATCATTAAATT+TGG | - | chr6_2:18108103-18108122 | Msa0911530:intron | 5.0% |
| CAGGACACAGACACGAACAT+GGG | + | chr6_2:18105653-18105672 | None:intergenic | 50.0% | |
| ACAGGACACAGACACGAACA+TGG | + | chr6_2:18105654-18105673 | None:intergenic | 50.0% | |
| TCATCTGCTTGTAACTGGGG+TGG | + | chr6_2:18105771-18105790 | None:intergenic | 50.0% | |
| CCCCAGTTACAAGCAGATGA+TGG | - | chr6_2:18105771-18105790 | Msa0911530:intron | 50.0% | |
| GCTCTATAGGTAGGCACCAT+TGG | + | chr6_2:18106236-18106255 | None:intergenic | 50.0% | |
| AATCAAGGTACGGCTAAGGG+GGG | + | chr6_2:18106341-18106360 | None:intergenic | 50.0% | |
| CAATCAAGGTACGGCTAAGG+GGG | + | chr6_2:18106342-18106361 | None:intergenic | 50.0% | |
| GCTCAATCAAGGTACGGCTA+AGG | + | chr6_2:18106345-18106364 | None:intergenic | 50.0% | |
| AAAGACGAGTCATGGTCGAG+AGG | - | chr6_2:18106805-18106824 | Msa0911530:intron | 50.0% | |
| !! | AGACGCTGACTTCACTTCAC+GGG | + | chr6_2:18107396-18107415 | None:intergenic | 50.0% |
| GCACCTGAAGGAGATGACAT+TGG | - | chr6_2:18107461-18107480 | Msa0911530:CDS | 50.0% | |
| CATTGGATCCGTTAACGTGG+AGG | - | chr6_2:18107478-18107497 | Msa0911530:CDS | 50.0% | |
| GTTTCCCCAAAGGAATCCAG+TGG | - | chr6_2:18107731-18107750 | Msa0911530:CDS | 50.0% | |
| AACGGCCACTGGATTCCTTT+GGG | + | chr6_2:18107739-18107758 | None:intergenic | 50.0% | |
| AAAGGAATCCAGTGGCCGTT+CGG | - | chr6_2:18107739-18107758 | Msa0911530:CDS | 50.0% | |
| CCACACCTGTTGATGCATCA+AGG | + | chr6_2:18107826-18107845 | None:intergenic | 50.0% | |
| CCTTGATGCATCAACAGGTG+TGG | - | chr6_2:18107823-18107842 | Msa0911530:intron | 50.0% | |
| CTTTCTTCCGAATCACTCGC+TGG | + | chr6_2:18108588-18108607 | None:intergenic | 50.0% | |
| GAGAACATTGATCCCGGTGA+AGG | - | chr6_2:18108630-18108649 | Msa0911530:CDS | 50.0% | |
| ACATTGATCCCGGTGAAGGT+TGG | - | chr6_2:18108634-18108653 | Msa0911530:CDS | 50.0% | |
| TCTGCATTCCAACCTTCACC+GGG | + | chr6_2:18108645-18108664 | None:intergenic | 50.0% | |
| AAACGGCCACTCGATTCCTT+TGG | + | chr6_2:18108958-18108977 | None:intergenic | 50.0% | |
| GTCTGCCTTGATGCATCAAC+CGG | - | chr6_2:18109036-18109055 | Msa0911530:CDS | 50.0% | |
| GAGGAAGAAGTGGTAGACGT+GGG | - | chr6_2:18109414-18109433 | Msa0911530:intron | 50.0% | |
| CCACCGGAGAAACATGTACA+AGG | + | chr6_2:18109551-18109570 | None:intergenic | 50.0% | |
| CCTTGTACATGTTTCTCCGG+TGG | - | chr6_2:18109548-18109567 | Msa0911530:intron | 50.0% | |
| ATCAGTATCCTCGGCAGCAA+TGG | + | chr6_2:18109697-18109716 | None:intergenic | 50.0% | |
| GTGGCATCAAAAGCCCTCAA+CGG | - | chr6_2:18109877-18109896 | Msa0911530:intron | 50.0% | |
| GGGAGAGAAGGGAAGATTGA+GGG | - | chr6_2:18110360-18110379 | Msa0911530:CDS | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | - | chr6_2:18110361-18110380 | Msa0911530:CDS | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | - | chr6_2:18110381-18110400 | Msa0911530:CDS | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | - | chr6_2:18110387-18110406 | Msa0911530:CDS | 50.0% | |
| AAGGGGCCATTTCGGCATTA+GGG | - | chr6_2:18110404-18110423 | Msa0911530:intron | 50.0% | |
| GAGCGATGCAAATTCAGACG+AGG | - | chr6_2:18110957-18110976 | Msa0911530:intron | 50.0% | |
| GTCGCTTACTTCCATGTGTC+TGG | + | chr6_2:18111318-18111337 | None:intergenic | 50.0% | |
| GTCGCTGGGAATGATTCGAG+CGG | - | chr6_2:18106006-18106025 | Msa0911530:CDS | 55.0% | |
| TCGCTGGGAATGATTCGAGC+GGG | - | chr6_2:18106007-18106026 | Msa0911530:CDS | 55.0% | |
| !! | TCATCCTCACTTGGTGCTGC+AGG | + | chr6_2:18107557-18107576 | None:intergenic | 55.0% |
| ACGGCCACTGGATTCCTTTG+GGG | + | chr6_2:18107738-18107757 | None:intergenic | 55.0% | |
| GAACGGCCACTGGATTCCTT+TGG | + | chr6_2:18107740-18107759 | None:intergenic | 55.0% | |
| AGGGACACCAGCGAGTGATT+CGG | - | chr6_2:18108578-18108597 | Msa0911530:CDS | 55.0% | |
| !! | TCGCACCGGTTGATGCATCA+AGG | + | chr6_2:18109044-18109063 | None:intergenic | 55.0% |
| GGAGGAAGAAGTGGTAGACG+TGG | - | chr6_2:18109413-18109432 | Msa0911530:intron | 55.0% | |
| GAGGGCTATCGATGCTACCT+TGG | + | chr6_2:18109503-18109522 | None:intergenic | 55.0% | |
| !! | GGTAGCATCGATAGCCCTCA+TGG | - | chr6_2:18109504-18109523 | Msa0911530:intron | 55.0% |
| GGGGAGAGAAGGGAAGATTG+AGG | - | chr6_2:18110359-18110378 | Msa0911530:CDS | 55.0% | |
| !! | GGAAGATTGAGGGGCATCTG+AGG | - | chr6_2:18110370-18110389 | Msa0911530:CDS | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | - | chr6_2:18110380-18110399 | Msa0911530:CDS | 55.0% |
| TGACTGGGAAGGGGCCATTT+CGG | - | chr6_2:18110396-18110415 | Msa0911530:CDS | 55.0% | |
| GAAGGGGCCATTTCGGCATT+AGG | - | chr6_2:18110403-18110422 | Msa0911530:intron | 55.0% | |
| GCACCTCCCTAATGCCGAAA+TGG | + | chr6_2:18110413-18110432 | None:intergenic | 55.0% | |
| CTGATACGGTGAGCCGGAAA+AGG | - | chr6_2:18110929-18110948 | Msa0911530:intron | 55.0% | |
| CGGTGAGCCGGAAAAGGAAA+AGG | - | chr6_2:18110935-18110954 | Msa0911530:intron | 55.0% | |
| CATGTCGGACACTGGGAGAC+AGG | + | chr6_2:18105672-18105691 | None:intergenic | 60.0% | |
| GCTTGTAACTGGGGTGGTGC+AGG | + | chr6_2:18105765-18105784 | None:intergenic | 60.0% | |
| GGATCCTGCAGCACCAAGTG+AGG | - | chr6_2:18107550-18107569 | Msa0911530:CDS | 60.0% | |
| GTGTTCAACCGAACGGCCAC+TGG | + | chr6_2:18107750-18107769 | None:intergenic | 60.0% | |
| GAATCACTCGCTGGTGTCCC+TGG | + | chr6_2:18108579-18108598 | None:intergenic | 60.0% | |
| GGGCCATTTCGGCATTAGGG+AGG | - | chr6_2:18110407-18110426 | Msa0911530:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 18104369 | 18111793 | 18104369 | ID=Msa0911530;Name=Msa0911530 |
| chr6_2 | mRNA | 18104369 | 18111793 | 18104369 | ID=Msa0911530-mRNA-1;Parent=Msa0911530;Name=Msa0911530-mRNA-1;_AED=0.25;_eAED=0.25;_QI=202|0.88|0.8|1|1|1|10|205|1179 |
| chr6_2 | exon | 18104369 | 18104749 | 18104369 | ID=Msa0911530-mRNA-1:exon:3771;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18105120 | 18105536 | 18105120 | ID=Msa0911530-mRNA-1:exon:3770;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18105947 | 18106798 | 18105947 | ID=Msa0911530-mRNA-1:exon:3769;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18106943 | 18107201 | 18106943 | ID=Msa0911530-mRNA-1:exon:3768;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18107377 | 18107828 | 18107377 | ID=Msa0911530-mRNA-1:exon:3767;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18108152 | 18108793 | 18108152 | ID=Msa0911530-mRNA-1:exon:3766;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18109029 | 18109409 | 18109029 | ID=Msa0911530-mRNA-1:exon:3765;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18110048 | 18110161 | 18110048 | ID=Msa0911530-mRNA-1:exon:3764;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18110286 | 18110418 | 18110286 | ID=Msa0911530-mRNA-1:exon:3763;Parent=Msa0911530-mRNA-1 |
| chr6_2 | exon | 18111478 | 18111793 | 18111478 | ID=Msa0911530-mRNA-1:exon:3762;Parent=Msa0911530-mRNA-1 |
| chr6_2 | five_prime_UTR | 18111592 | 18111793 | 18111592 | ID=Msa0911530-mRNA-1:five_prime_utr;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18111478 | 18111591 | 18111478 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18110286 | 18110418 | 18110286 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18110048 | 18110161 | 18110048 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18109029 | 18109409 | 18109029 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18108152 | 18108793 | 18108152 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18107377 | 18107828 | 18107377 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18106943 | 18107201 | 18106943 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18105947 | 18106798 | 18105947 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18105120 | 18105536 | 18105120 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | CDS | 18104574 | 18104749 | 18104574 | ID=Msa0911530-mRNA-1:cds;Parent=Msa0911530-mRNA-1 |
| chr6_2 | three_prime_UTR | 18104369 | 18104573 | 18104369 | ID=Msa0911530-mRNA-1:three_prime_utr;Parent=Msa0911530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
