Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035140 | XP_013469395.1 | 100.000 | 137 | 0 | 0 | 197 | 333 | 1 | 137 | 1.59e-89 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035140 | sp|Q1S9I9|H2B1_MEDTR | 87.162 | 148 | 8 | 3 | 197 | 333 | 1 | 148 | 5.21e-73 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035140 | I3S6Z4 | 100.000 | 137 | 0 | 0 | 197 | 333 | 1 | 137 | 7.58e-90 | 274 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0035140 | 0.803668 | 3.123607e-49 | -8.615850e-47 |
| Msa0005890 | Msa0035140 | 0.813307 | 2.735485e-51 | -8.615850e-47 |
| Msa0008040 | Msa0035140 | 0.800931 | 1.143352e-48 | -8.615850e-47 |
| Msa0016040 | Msa0035140 | 0.850354 | 1.792897e-60 | -8.615850e-47 |
| Msa0018160 | Msa0035140 | 0.815116 | 1.090228e-51 | -8.615850e-47 |
| Msa0019930 | Msa0035140 | 0.843167 | 1.655334e-58 | -8.615850e-47 |
| Msa0020540 | Msa0035140 | 0.813955 | 1.969626e-51 | -8.615850e-47 |
| Msa0025580 | Msa0035140 | 0.846402 | 2.221397e-59 | -8.615850e-47 |
| Msa0027280 | Msa0035140 | 0.859703 | 3.442436e-63 | -8.615850e-47 |
| Msa0032460 | Msa0035140 | 0.814583 | 1.430995e-51 | -8.615850e-47 |
| Msa0032980 | Msa0035140 | 0.806823 | 6.823382e-50 | -8.615850e-47 |
| Msa0034830 | Msa0035140 | 0.827620 | 1.414402e-54 | -8.615850e-47 |
| Msa0035140 | Msa0035340 | 0.814945 | 1.189662e-51 | -8.615850e-47 |
| Msa0035140 | Msa0035380 | 0.819579 | 1.078559e-52 | -8.615850e-47 |
| Msa0035140 | Msa0036870 | 0.819579 | 1.078222e-52 | -8.615850e-47 |
| Msa0035140 | Msa0037740 | 0.800436 | 1.442428e-48 | -8.615850e-47 |
| Msa0035140 | Msa0042640 | 0.831962 | 1.239713e-55 | -8.615850e-47 |
| Msa0035140 | Msa0048510 | 0.816667 | 4.914364e-52 | -8.615850e-47 |
| Msa0035140 | Msa0052260 | 0.818360 | 2.041845e-52 | -8.615850e-47 |
| Msa0035140 | Msa0053070 | 0.827175 | 1.809233e-54 | -8.615850e-47 |
| Msa0035140 | Msa0054690 | 0.833335 | 5.656423e-56 | -8.615850e-47 |
| Msa0035140 | Msa0056180 | 0.851562 | 8.185498e-61 | -8.615850e-47 |
| Msa0035140 | Msa0062340 | 0.801078 | 1.066849e-48 | -8.615850e-47 |
| Msa0035140 | Msa0067060 | 0.814093 | 1.835846e-51 | -8.615850e-47 |
| Msa0035140 | Msa0067380 | 0.809676 | 1.682020e-50 | -8.615850e-47 |
| Msa0035140 | Msa0068150 | 0.840826 | 6.881721e-58 | -8.615850e-47 |
| Msa0035140 | Msa0073120 | 0.806544 | 7.813565e-50 | -8.615850e-47 |
| Msa0035140 | Msa0075530 | 0.821039 | 4.989030e-53 | -8.615850e-47 |
| Msa0035140 | Msa0077560 | 0.830421 | 2.965638e-55 | -8.615850e-47 |
| Msa0035140 | Msa0081980 | 0.825485 | 4.568129e-54 | -8.615850e-47 |
| Msa0035140 | Msa0091360 | 0.851188 | 1.044051e-60 | -8.615850e-47 |
| Msa0035140 | Msa0094780 | 0.810033 | 1.409128e-50 | -8.615850e-47 |
| Msa0035140 | Msa0097260 | 0.807613 | 4.640510e-50 | -8.615850e-47 |
| Msa0035140 | Msa0098410 | 0.807887 | 4.058228e-50 | -8.615850e-47 |
| Msa0035140 | Msa0112670 | 0.807876 | 4.079283e-50 | -8.615850e-47 |
| Msa0035140 | Msa0115550 | 0.855055 | 8.154291e-62 | -8.615850e-47 |
| Msa0035140 | Msa0121330 | 0.847898 | 8.642450e-60 | -8.615850e-47 |
| Msa0035140 | Msa0122330 | 0.819679 | 1.023069e-52 | -8.615850e-47 |
| Msa0035140 | Msa0123070 | 0.806439 | 8.222985e-50 | -8.615850e-47 |
| Msa0035140 | Msa0127680 | 0.808291 | 3.328262e-50 | -8.615850e-47 |
| Msa0035140 | Msa0128460 | 0.815158 | 1.066925e-51 | -8.615850e-47 |
| Msa0035140 | Msa0133150 | 0.804238 | 2.377459e-49 | -8.615850e-47 |
| Msa0035140 | Msa0140200 | 0.817939 | 2.542508e-52 | -8.615850e-47 |
| Msa0035140 | Msa0140280 | 0.824948 | 6.119199e-54 | -8.615850e-47 |
| Msa0035140 | Msa0140380 | 0.839916 | 1.190288e-57 | -8.615850e-47 |
| Msa0035140 | Msa0141640 | 0.828144 | 1.058593e-54 | -8.615850e-47 |
| Msa0035140 | Msa0143670 | 0.839010 | 2.046207e-57 | -8.615850e-47 |
| Msa0035140 | Msa0156050 | 0.801061 | 1.075470e-48 | -8.615850e-47 |
| Msa0035140 | Msa0159590 | 0.834116 | 3.610503e-56 | -8.615850e-47 |
| Msa0035140 | Msa0161930 | 0.833199 | 6.116652e-56 | -8.615850e-47 |
| Msa0035140 | Msa0165830 | 0.801584 | 8.405067e-49 | -8.615850e-47 |
| Msa0035140 | Msa0174290 | 0.829548 | 4.841144e-55 | -8.615850e-47 |
| Msa0035140 | Msa0190110 | 0.809553 | 1.787594e-50 | -8.615850e-47 |
| Msa0035140 | Msa0190570 | 0.823801 | 1.138847e-53 | -8.615850e-47 |
| Msa0035140 | Msa0190730 | 0.801563 | 8.489186e-49 | -8.615850e-47 |
| Msa0035140 | Msa0200050 | 0.853269 | 2.672590e-61 | -8.615850e-47 |
| Msa0035140 | Msa0209980 | 0.810355 | 1.201441e-50 | -8.615850e-47 |
| Msa0035140 | Msa0213030 | 0.808273 | 3.358421e-50 | -8.615850e-47 |
| Msa0035140 | Msa0225860 | 0.824233 | 9.016749e-54 | -8.615850e-47 |
| Msa0035140 | Msa0227370 | 0.800045 | 1.732990e-48 | -8.615850e-47 |
| Msa0035140 | Msa0232760 | 0.828346 | 9.459325e-55 | -8.615850e-47 |
| Msa0035140 | Msa0233020 | 0.807227 | 5.601884e-50 | -8.615850e-47 |
| Msa0035140 | Msa0233070 | 0.808627 | 2.822314e-50 | -8.615850e-47 |
| Msa0035140 | Msa0242590 | 0.825850 | 3.742913e-54 | -8.615850e-47 |
| Msa0035140 | Msa0260510 | 0.800333 | 1.513920e-48 | -8.615850e-47 |
| Msa0035140 | Msa0272260 | 0.817759 | 2.791637e-52 | -8.615850e-47 |
| Msa0035140 | Msa0280790 | 0.817927 | 2.558111e-52 | -8.615850e-47 |
| Msa0035140 | Msa0298470 | 0.873650 | 1.247764e-67 | -8.615850e-47 |
| Msa0035140 | Msa0337480 | 0.824994 | 5.969943e-54 | -8.615850e-47 |
| Msa0035140 | Msa0353950 | 0.833037 | 6.713530e-56 | -8.615850e-47 |
| Msa0035140 | Msa0367150 | 0.818183 | 2.238794e-52 | -8.615850e-47 |
| Msa0035140 | Msa0367520 | 0.842796 | 2.077457e-58 | -8.615850e-47 |
| Msa0035140 | Msa0373500 | 0.809975 | 1.450516e-50 | -8.615850e-47 |
| Msa0035140 | Msa0380670 | 0.824626 | 7.288424e-54 | -8.615850e-47 |
| Msa0035140 | Msa0381730 | 0.809483 | 1.850320e-50 | -8.615850e-47 |
| Msa0035140 | Msa0383000 | 0.839512 | 1.516313e-57 | -8.615850e-47 |
| Msa0035140 | Msa0389950 | 0.873241 | 1.712635e-67 | -8.615850e-47 |
| Msa0035140 | Msa0400000 | 0.814152 | 1.781492e-51 | -8.615850e-47 |
| Msa0035140 | Msa0400950 | 0.832372 | 9.817023e-56 | -8.615850e-47 |
| Msa0035140 | Msa0422050 | 0.846513 | 2.072112e-59 | -8.615850e-47 |
| Msa0035140 | Msa0430300 | 0.823128 | 1.636677e-53 | -8.615850e-47 |
| Msa0035140 | Msa0430480 | 0.810881 | 9.247698e-51 | -8.615850e-47 |
| Msa0035140 | Msa0431200 | 0.806059 | 9.884362e-50 | -8.615850e-47 |
| Msa0035140 | Msa0432010 | 0.828302 | 9.694503e-55 | -8.615850e-47 |
| Msa0035140 | Msa0433150 | 0.839599 | 1.439189e-57 | -8.615850e-47 |
| Msa0035140 | Msa0443410 | 0.813286 | 2.764712e-51 | -8.615850e-47 |
| Msa0035140 | Msa0447750 | 0.866713 | 2.331093e-65 | -8.615850e-47 |
| Msa0035140 | Msa0460780 | 0.814356 | 1.606130e-51 | -8.615850e-47 |
| Msa0035140 | Msa0468700 | 0.801019 | 1.096796e-48 | -8.615850e-47 |
| Msa0035140 | Msa0476280 | 0.818173 | 2.250258e-52 | -8.615850e-47 |
| Msa0035140 | Msa0481890 | 0.840016 | 1.120884e-57 | -8.615850e-47 |
| Msa0035140 | Msa0495550 | 0.850258 | 1.906905e-60 | -8.615850e-47 |
| Msa0035140 | Msa0503990 | 0.803668 | 3.123009e-49 | -8.615850e-47 |
| Msa0035140 | Msa0507020 | 0.816894 | 4.370646e-52 | -8.615850e-47 |
| Msa0035140 | Msa0520260 | 0.808078 | 3.695393e-50 | -8.615850e-47 |
| Msa0035140 | Msa0520870 | 0.839876 | 1.218659e-57 | -8.615850e-47 |
| Msa0035140 | Msa0521680 | 0.806545 | 7.808271e-50 | -8.615850e-47 |
| Msa0035140 | Msa0524520 | 0.847502 | 1.110773e-59 | -8.615850e-47 |
| Msa0035140 | Msa0531960 | 0.851344 | 9.437004e-61 | -8.615850e-47 |
| Msa0035140 | Msa0548000 | 0.839634 | 1.408921e-57 | -8.615850e-47 |
| Msa0035140 | Msa0550590 | 0.813539 | 2.431790e-51 | -8.615850e-47 |
| Msa0035140 | Msa0556540 | 0.807781 | 4.274901e-50 | -8.615850e-47 |
| Msa0035140 | Msa0561560 | 0.832735 | 7.978009e-56 | -8.615850e-47 |
| Msa0035140 | Msa0563740 | 0.840264 | 9.652769e-58 | -8.615850e-47 |
| Msa0035140 | Msa0563940 | 0.805870 | 1.083524e-49 | -8.615850e-47 |
| Msa0035140 | Msa0563980 | 0.839972 | 1.150449e-57 | -8.615850e-47 |
| Msa0035140 | Msa0567170 | 0.835011 | 2.150711e-56 | -8.615850e-47 |
| Msa0035140 | Msa0571620 | 0.854638 | 1.077410e-61 | -8.615850e-47 |
| Msa0035140 | Msa0572510 | 0.803212 | 3.882741e-49 | -8.615850e-47 |
| Msa0035140 | Msa0572530 | 0.802926 | 4.449025e-49 | -8.615850e-47 |
| Msa0035140 | Msa0574050 | 0.800140 | 1.656958e-48 | -8.615850e-47 |
| Msa0035140 | Msa0577280 | 0.801188 | 1.013233e-48 | -8.615850e-47 |
| Msa0035140 | Msa0577330 | 0.802345 | 5.862402e-49 | -8.615850e-47 |
| Msa0035140 | Msa0577820 | 0.816109 | 6.550749e-52 | -8.615850e-47 |
| Msa0035140 | Msa0580200 | 0.850721 | 1.414202e-60 | -8.615850e-47 |
| Msa0035140 | Msa0580370 | 0.832517 | 9.036340e-56 | -8.615850e-47 |
| Msa0035140 | Msa0580810 | 0.839144 | 1.889280e-57 | -8.615850e-47 |
| Msa0035140 | Msa0585340 | 0.825976 | 3.495050e-54 | -8.615850e-47 |
| Msa0035140 | Msa0590200 | 0.813060 | 3.098242e-51 | -8.615850e-47 |
| Msa0035140 | Msa0603410 | 0.827203 | 1.780573e-54 | -8.615850e-47 |
| Msa0035140 | Msa0603980 | 0.814328 | 1.629663e-51 | -8.615850e-47 |
| Msa0035140 | Msa0606100 | 0.852228 | 5.297673e-61 | -8.615850e-47 |
| Msa0035140 | Msa0607800 | 0.801299 | 9.615361e-49 | -8.615850e-47 |
| Msa0035140 | Msa0621710 | 0.877536 | 5.810673e-69 | -8.615850e-47 |
| Msa0035140 | Msa0645340 | 0.838228 | 3.256569e-57 | -8.615850e-47 |
| Msa0035140 | Msa0647050 | 0.826053 | 3.350046e-54 | -8.615850e-47 |
| Msa0035140 | Msa0652070 | 0.819221 | 1.301137e-52 | -8.615850e-47 |
| Msa0035140 | Msa0652710 | 0.806573 | 7.702353e-50 | -8.615850e-47 |
| Msa0035140 | Msa0657700 | 0.839108 | 1.929727e-57 | -8.615850e-47 |
| Msa0035140 | Msa0658640 | 0.821511 | 3.884342e-53 | -8.615850e-47 |
| Msa0035140 | Msa0659150 | 0.837058 | 6.504021e-57 | -8.615850e-47 |
| Msa0035140 | Msa0661150 | 0.844922 | 5.600307e-59 | -8.615850e-47 |
| Msa0035140 | Msa0666700 | 0.876387 | 1.453797e-68 | -8.615850e-47 |
| Msa0035140 | Msa0668900 | 0.835122 | 2.015998e-56 | -8.615850e-47 |
| Msa0035140 | Msa0670100 | 0.802693 | 4.969827e-49 | -8.615850e-47 |
| Msa0035140 | Msa0694630 | 0.806337 | 8.639327e-50 | -8.615850e-47 |
| Msa0035140 | Msa0698730 | 0.849846 | 2.487037e-60 | -8.615850e-47 |
| Msa0035140 | Msa0700460 | 0.801631 | 8.218235e-49 | -8.615850e-47 |
| Msa0035140 | Msa0702810 | 0.831283 | 1.822825e-55 | -8.615850e-47 |
| Msa0035140 | Msa0703600 | 0.814658 | 1.377041e-51 | -8.615850e-47 |
| Msa0035140 | Msa0704410 | 0.814491 | 1.499784e-51 | -8.615850e-47 |
| Msa0035140 | Msa0709200 | 0.815578 | 8.606636e-52 | -8.615850e-47 |
| Msa0035140 | Msa0709440 | 0.838722 | 2.428729e-57 | -8.615850e-47 |
| Msa0035140 | Msa0713960 | 0.802455 | 5.563778e-49 | -8.615850e-47 |
| Msa0035140 | Msa0714520 | 0.814442 | 1.537389e-51 | -8.615850e-47 |
| Msa0035140 | Msa0718040 | 0.816242 | 6.115958e-52 | -8.615850e-47 |
| Msa0035140 | Msa0735780 | 0.848950 | 4.419165e-60 | -8.615850e-47 |
| Msa0035140 | Msa0740710 | 0.863769 | 1.965305e-64 | -8.615850e-47 |
| Msa0035140 | Msa0743440 | 0.823764 | 1.162231e-53 | -8.615850e-47 |
| Msa0035140 | Msa0745720 | 0.805263 | 1.452335e-49 | -8.615850e-47 |
| Msa0035140 | Msa0747740 | 0.836508 | 8.983534e-57 | -8.615850e-47 |
| Msa0035140 | Msa0755760 | 0.819889 | 9.160760e-53 | -8.615850e-47 |
| Msa0035140 | Msa0756590 | 0.809202 | 2.126401e-50 | -8.615850e-47 |
| Msa0035140 | Msa0758590 | 0.807392 | 5.168340e-50 | -8.615850e-47 |
| Msa0035140 | Msa0758650 | 0.818727 | 1.685415e-52 | -8.615850e-47 |
| Msa0035140 | Msa0761670 | 0.874018 | 9.371833e-68 | -8.615850e-47 |
| Msa0035140 | Msa0773630 | 0.845275 | 4.495245e-59 | -8.615850e-47 |
| Msa0035140 | Msa0773670 | 0.842682 | 2.227804e-58 | -8.615850e-47 |
| Msa0035140 | Msa0777750 | 0.823622 | 1.254579e-53 | -8.615850e-47 |
| Msa0035140 | Msa0780910 | 0.840364 | 9.091060e-58 | -8.615850e-47 |
| Msa0035140 | Msa0791730 | 0.806884 | 6.622054e-50 | -8.615850e-47 |
| Msa0035140 | Msa0795870 | 0.825219 | 5.281659e-54 | -8.615850e-47 |
| Msa0035140 | Msa0800660 | 0.821573 | 3.758737e-53 | -8.615850e-47 |
| Msa0035140 | Msa0811020 | 0.833008 | 6.823126e-56 | -8.615850e-47 |
| Msa0035140 | Msa0818880 | 0.806870 | 6.666122e-50 | -8.615850e-47 |
| Msa0035140 | Msa0821160 | 0.835119 | 2.019689e-56 | -8.615850e-47 |
| Msa0035140 | Msa0824450 | 0.822577 | 2.198774e-53 | -8.615850e-47 |
| Msa0035140 | Msa0828190 | 0.802971 | 4.355570e-49 | -8.615850e-47 |
| Msa0035140 | Msa0828970 | 0.835632 | 1.498678e-56 | -8.615850e-47 |
| Msa0035140 | Msa0833650 | 0.831139 | 1.977337e-55 | -8.615850e-47 |
| Msa0035140 | Msa0835350 | 0.804017 | 2.643484e-49 | -8.615850e-47 |
| Msa0035140 | Msa0838750 | 0.813201 | 2.885504e-51 | -8.615850e-47 |
| Msa0035140 | Msa0855230 | 0.803343 | 3.647754e-49 | -8.615850e-47 |
| Msa0035140 | Msa0863620 | 0.838102 | 3.510111e-57 | -8.615850e-47 |
| Msa0035140 | Msa0866530 | 0.805415 | 1.349812e-49 | -8.615850e-47 |
| Msa0035140 | Msa0867110 | 0.804596 | 2.002523e-49 | -8.615850e-47 |
| Msa0035140 | Msa0888790 | 0.833503 | 5.138470e-56 | -8.615850e-47 |
| Msa0035140 | Msa0900760 | 0.852616 | 4.108290e-61 | -8.615850e-47 |
| Msa0035140 | Msa0909760 | 0.878127 | 3.609585e-69 | -8.615850e-47 |
| Msa0035140 | Msa0911530 | 0.804448 | 2.149702e-49 | -8.615850e-47 |
| Msa0035140 | Msa0915520 | 0.853282 | 2.649285e-61 | -8.615850e-47 |
| Msa0035140 | Msa0924430 | 0.805742 | 1.152583e-49 | -8.615850e-47 |
| Msa0035140 | Msa0931590 | 0.859741 | 3.353908e-63 | -8.615850e-47 |
| Msa0035140 | Msa0960770 | 0.823380 | 1.429359e-53 | -8.615850e-47 |
| Msa0035140 | Msa0966320 | 0.833701 | 4.584169e-56 | -8.615850e-47 |
| Msa0035140 | Msa0966480 | 0.822005 | 2.985412e-53 | -8.615850e-47 |
| Msa0035140 | Msa0966710 | 0.800761 | 1.238697e-48 | -8.615850e-47 |
| Msa0035140 | Msa0980990 | 0.805263 | 1.452457e-49 | -8.615850e-47 |
| Msa0035140 | Msa0997920 | 0.821699 | 3.513434e-53 | -8.615850e-47 |
| Msa0035140 | Msa1008670 | 0.823974 | 1.037455e-53 | -8.615850e-47 |
| Msa0035140 | Msa1008680 | 0.806223 | 9.129777e-50 | -8.615850e-47 |
| Msa0035140 | Msa1033920 | 0.874582 | 6.035065e-68 | -8.615850e-47 |
| Msa0035140 | Msa1035220 | 0.843534 | 1.320848e-58 | -8.615850e-47 |
| Msa0035140 | Msa1035570 | 0.824712 | 6.957287e-54 | -8.615850e-47 |
| Msa0035140 | Msa1035610 | 0.826665 | 2.394492e-54 | -8.615850e-47 |
| Msa0035140 | Msa1035650 | 0.810046 | 1.400074e-50 | -8.615850e-47 |
| Msa0035140 | Msa1037540 | 0.853875 | 1.789820e-61 | -8.615850e-47 |
| Msa0035140 | Msa1042160 | 0.813695 | 2.246800e-51 | -8.615850e-47 |
| Msa0035140 | Msa1042190 | 0.814743 | 1.318506e-51 | -8.615850e-47 |
| Msa0035140 | Msa1042880 | 0.802400 | 5.712342e-49 | -8.615850e-47 |
| Msa0035140 | Msa1059020 | 0.807987 | 3.864291e-50 | -8.615850e-47 |
| Msa0035140 | Msa1060900 | 0.804943 | 1.694244e-49 | -8.615850e-47 |
| Msa0035140 | Msa1078880 | 0.843786 | 1.131117e-58 | -8.615850e-47 |
| Msa0035140 | Msa1078970 | 0.858386 | 8.534795e-63 | -8.615850e-47 |
| Msa0035140 | Msa1081390 | 0.855019 | 8.352539e-62 | -8.615850e-47 |
| Msa0035140 | Msa1082200 | 0.843028 | 1.802457e-58 | -8.615850e-47 |
| Msa0035140 | Msa1082380 | 0.827041 | 1.947905e-54 | -8.615850e-47 |
| Msa0035140 | Msa1084530 | 0.834701 | 2.573926e-56 | -8.615850e-47 |
| Msa0035140 | Msa1090140 | 0.866834 | 2.133176e-65 | -8.615850e-47 |
| Msa0035140 | Msa1103990 | 0.809934 | 1.480307e-50 | -8.615850e-47 |
| Msa0035140 | Msa1114630 | 0.801930 | 7.136280e-49 | -8.615850e-47 |
| Msa0035140 | Msa1116190 | 0.834771 | 2.471794e-56 | -8.615850e-47 |
| Msa0035140 | Msa1116220 | 0.857931 | 1.166176e-62 | -8.615850e-47 |
| Msa0035140 | Msa1116660 | 0.918186 | 2.126309e-86 | -8.615850e-47 |
| Msa0035140 | Msa1116740 | 0.872835 | 2.342608e-67 | -8.615850e-47 |
| Msa0035140 | Msa1125820 | 0.842661 | 2.256923e-58 | -8.615850e-47 |
| Msa0035140 | Msa1125990 | 0.842627 | 2.304014e-58 | -8.615850e-47 |
| Msa0035140 | Msa1127280 | 0.823571 | 1.289615e-53 | -8.615850e-47 |
| Msa0035140 | Msa1130420 | 0.851105 | 1.102148e-60 | -8.615850e-47 |
| Msa0035140 | Msa1132530 | 0.828423 | 9.066913e-55 | -8.615850e-47 |
| Msa0035140 | Msa1132840 | 0.830164 | 3.425627e-55 | -8.615850e-47 |
| Msa0035140 | Msa1139050 | 0.843601 | 1.267392e-58 | -8.615850e-47 |
| Msa0035140 | Msa1162590 | 0.801969 | 7.005236e-49 | -8.615850e-47 |
| Msa0035140 | Msa1162880 | 0.902955 | 5.706800e-79 | -8.615850e-47 |
| Msa0035140 | Msa1165480 | 0.826850 | 2.163253e-54 | -8.615850e-47 |
| Msa0035140 | Msa1169190 | 0.841613 | 4.272732e-58 | -8.615850e-47 |
| Msa0035140 | Msa1171290 | 0.833706 | 4.571794e-56 | -8.615850e-47 |
| Msa0035140 | Msa1190390 | 0.805944 | 1.045168e-49 | -8.615850e-47 |
| Msa0035140 | Msa1203300 | 0.802365 | 5.808874e-49 | -8.615850e-47 |
| Msa0035140 | Msa1208950 | 0.816707 | 4.813030e-52 | -8.615850e-47 |
| Msa0035140 | Msa1214350 | 0.825013 | 5.906582e-54 | -8.615850e-47 |
| Msa0035140 | Msa1217910 | 0.800394 | 1.471358e-48 | -8.615850e-47 |
| Msa0035140 | Msa1226520 | 0.826798 | 2.226629e-54 | -8.615850e-47 |
| Msa0035140 | Msa1228870 | 0.815622 | 8.412891e-52 | -8.615850e-47 |
| Msa0035140 | Msa1244240 | 0.863197 | 2.957138e-64 | -8.615850e-47 |
| Msa0035140 | Msa1254540 | 0.850469 | 1.664043e-60 | -8.615850e-47 |
| Msa0035140 | Msa1261050 | 0.804444 | 2.153752e-49 | -8.615850e-47 |
| Msa0035140 | Msa1263740 | 0.806482 | 8.051811e-50 | -8.615850e-47 |
| Msa0035140 | Msa1263780 | 0.839339 | 1.681114e-57 | -8.615850e-47 |
| Msa0035140 | Msa1263900 | 0.800209 | 1.604180e-48 | -8.615850e-47 |
| Msa0035140 | Msa1268630 | 0.810750 | 9.868257e-51 | -8.615850e-47 |
| Msa0035140 | Msa1282260 | 0.809678 | 1.680729e-50 | -8.615850e-47 |
| Msa0035140 | Msa1300460 | 0.809807 | 1.576556e-50 | -8.615850e-47 |
| Msa0035140 | Msa1301700 | 0.804374 | 2.227820e-49 | -8.615850e-47 |
| Msa0035140 | Msa1305780 | 0.804251 | 2.362500e-49 | -8.615850e-47 |
| Msa0035140 | Msa1306790 | 0.813727 | 2.211381e-51 | -8.615850e-47 |
| Msa0035140 | Msa1308820 | 0.808304 | 3.308229e-50 | -8.615850e-47 |
| Msa0035140 | Msa1309090 | 0.804563 | 2.034058e-49 | -8.615850e-47 |
| Msa0035140 | Msa1321340 | 0.814141 | 1.791686e-51 | -8.615850e-47 |
| Msa0035140 | Msa1332950 | 0.800321 | 1.522183e-48 | -8.615850e-47 |
| Msa0035140 | Msa1338210 | 0.825490 | 4.557648e-54 | -8.615850e-47 |
| Msa0035140 | Msa1339170 | 0.822619 | 2.149844e-53 | -8.615850e-47 |
| Msa0035140 | Msa1343170 | 0.850125 | 2.078180e-60 | -8.615850e-47 |
| Msa0035140 | Msa1343180 | 0.843074 | 1.752237e-58 | -8.615850e-47 |
| Msa0035140 | Msa1359690 | 0.831643 | 1.486059e-55 | -8.615850e-47 |
| Msa0035140 | Msa1359980 | 0.808553 | 2.927065e-50 | -8.615850e-47 |
| Msa0035140 | Msa1364410 | 0.820470 | 6.742677e-53 | -8.615850e-47 |
| Msa0035140 | Msa1367180 | 0.800194 | 1.616081e-48 | -8.615850e-47 |
| Msa0035140 | Msa1368750 | 0.825945 | 3.554695e-54 | -8.615850e-47 |
| Msa0035140 | Msa1372040 | 0.839179 | 1.849427e-57 | -8.615850e-47 |
| Msa0035140 | Msa1374790 | 0.832787 | 7.744749e-56 | -8.615850e-47 |
| Msa0035140 | Msa1381180 | 0.827640 | 1.398971e-54 | -8.615850e-47 |
| Msa0035140 | Msa1383310 | 0.803112 | 4.071696e-49 | -8.615850e-47 |
| Msa0035140 | Msa1397400 | 0.806125 | 9.575504e-50 | -8.615850e-47 |
| Msa0035140 | Msa1400010 | 0.810998 | 8.723143e-51 | -8.615850e-47 |
| Msa0035140 | Msa1409410 | 0.838092 | 3.530592e-57 | -8.615850e-47 |
| Msa0035140 | Msa1417060 | 0.802286 | 6.029257e-49 | -8.615850e-47 |
| Msa0035140 | Msa1421570 | 0.812343 | 4.446892e-51 | -8.615850e-47 |
| Msa0035140 | Msa1426110 | 0.818782 | 1.637907e-52 | -8.615850e-47 |
| Msa0035140 | Msa1437930 | 0.825602 | 4.285950e-54 | -8.615850e-47 |
| Msa0035140 | Msa1445120 | 0.802768 | 4.797084e-49 | -8.615850e-47 |
| Msa0035140 | Msa1446100 | 0.857048 | 2.128664e-62 | -8.615850e-47 |
| Msa0035140 | Msa1447170 | 0.918655 | 1.192426e-86 | -8.615850e-47 |
| Msa0035140 | Msa1450190 | 0.849047 | 4.154358e-60 | -8.615850e-47 |
| Msa0035140 | Msa1451820 | 0.829940 | 3.886078e-55 | -8.615850e-47 |
| Msa0035140 | Msa1453280 | 0.806159 | 9.419741e-50 | -8.615850e-47 |
| Msa0035140 | Msa1454010 | 0.804896 | 1.733254e-49 | -8.615850e-47 |
| Msa0035140 | Msa1465360 | 0.800492 | 1.405326e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035140 | MtrunA17_Chr1g0198251 | 100.000 | 137 | 0 | 0 | 197 | 333 | 1 | 137 | 1.46e-93 | 274 |
| Msa0035140 | MtrunA17_Chr1g0197451 | 99.270 | 137 | 1 | 0 | 197 | 333 | 1 | 137 | 6.58e-93 | 272 |
| Msa0035140 | MtrunA17_Chr4g0030981 | 86.395 | 147 | 10 | 3 | 197 | 333 | 1 | 147 | 4.22e-79 | 238 |
| Msa0035140 | MtrunA17_Chr4g0031671 | 87.162 | 148 | 8 | 3 | 197 | 333 | 1 | 148 | 5.84e-75 | 227 |
| Msa0035140 | MtrunA17_Chr4g0031631 | 87.162 | 148 | 8 | 3 | 197 | 333 | 1 | 148 | 5.84e-75 | 227 |
| Msa0035140 | MtrunA17_Chr4g0030941 | 87.162 | 148 | 8 | 3 | 197 | 333 | 1 | 148 | 5.84e-75 | 227 |
| Msa0035140 | MtrunA17_Chr4g0031061 | 86.486 | 148 | 9 | 3 | 197 | 333 | 1 | 148 | 3.12e-74 | 225 |
| Msa0035140 | MtrunA17_Chr4g0032321 | 86.486 | 148 | 9 | 3 | 197 | 333 | 1 | 148 | 3.12e-74 | 225 |
| Msa0035140 | MtrunA17_Chr4g0035061 | 87.162 | 148 | 8 | 3 | 197 | 333 | 1 | 148 | 3.84e-74 | 225 |
| Msa0035140 | MtrunA17_Chr4g0035631 | 87.162 | 148 | 8 | 3 | 197 | 333 | 1 | 148 | 3.84e-74 | 225 |
| Msa0035140 | MtrunA17_Chr4g0046191 | 89.510 | 143 | 9 | 3 | 197 | 333 | 1 | 143 | 1.05e-73 | 224 |
| Msa0035140 | MtrunA17_Chr4g0035071 | 85.811 | 148 | 10 | 3 | 197 | 333 | 1 | 148 | 2.50e-72 | 221 |
| Msa0035140 | MtrunA17_Chr4g0030951 | 86.806 | 144 | 8 | 3 | 201 | 333 | 4 | 147 | 8.53e-72 | 219 |
| Msa0035140 | MtrunA17_Chr7g0263031 | 95.413 | 109 | 4 | 1 | 225 | 333 | 31 | 138 | 1.98e-61 | 192 |
| Msa0035140 | MtrunA17_Chr1g0182361 | 98.913 | 92 | 1 | 0 | 242 | 333 | 45 | 136 | 3.00e-60 | 189 |
| Msa0035140 | MtrunA17_Chr1g0197471 | 75.168 | 149 | 29 | 4 | 1 | 149 | 1 | 141 | 4.15e-59 | 191 |
| Msa0035140 | MtrunA17_Chr2g0320511 | 61.798 | 89 | 34 | 0 | 244 | 332 | 136 | 224 | 9.37e-35 | 126 |
| Msa0035140 | MtrunA17_Chr8g0368781 | 69.663 | 89 | 24 | 1 | 204 | 292 | 3 | 88 | 9.96e-35 | 122 |
| Msa0035140 | MtrunA17_Chr4g0031051 | 90.196 | 51 | 5 | 0 | 271 | 321 | 1 | 51 | 3.67e-25 | 95.9 |
| Msa0035140 | MtrunA17_Chr7g0228831 | 87.273 | 55 | 6 | 1 | 228 | 281 | 27 | 81 | 7.58e-20 | 83.2 |
| Msa0035140 | MtrunA17_Chr4g0014401 | 39.773 | 88 | 48 | 1 | 235 | 317 | 23 | 110 | 3.16e-12 | 63.2 |
| Msa0035140 | MtrunA17_Chr4g0034461 | 66.000 | 50 | 17 | 0 | 100 | 149 | 111 | 160 | 6.90e-12 | 65.5 |
| Msa0035140 | MtrunA17_Chr4g0075141 | 38.095 | 84 | 49 | 2 | 249 | 330 | 34 | 116 | 2.24e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0035140 | AT2G37470.1 | 88.406 | 138 | 14 | 2 | 197 | 332 | 1 | 138 | 1.66e-72 | 221 |
| Msa0035140 | AT3G45980.1 | 83.333 | 150 | 12 | 3 | 197 | 333 | 1 | 150 | 5.33e-72 | 220 |
| Msa0035140 | AT2G28720.1 | 82.119 | 151 | 13 | 2 | 197 | 333 | 1 | 151 | 8.33e-72 | 219 |
| Msa0035140 | AT1G07790.1 | 83.333 | 150 | 10 | 4 | 197 | 333 | 1 | 148 | 4.39e-69 | 213 |
| Msa0035140 | AT3G53650.1 | 86.331 | 139 | 16 | 3 | 197 | 333 | 1 | 138 | 6.62e-69 | 212 |
| Msa0035140 | AT5G59910.1 | 87.313 | 134 | 15 | 2 | 202 | 333 | 17 | 150 | 3.21e-67 | 208 |
| Msa0035140 | AT3G46030.1 | 89.147 | 129 | 12 | 2 | 207 | 333 | 17 | 145 | 9.58e-67 | 206 |
| Msa0035140 | AT5G02570.1 | 84.173 | 139 | 13 | 2 | 197 | 333 | 1 | 132 | 9.72e-64 | 198 |
| Msa0035140 | AT5G22880.1 | 80.282 | 142 | 14 | 2 | 206 | 333 | 4 | 145 | 1.44e-63 | 198 |
| Msa0035140 | AT3G09480.1 | 79.562 | 137 | 17 | 2 | 197 | 333 | 1 | 126 | 1.12e-59 | 188 |
| Msa0035140 | AT1G08170.1 | 56.989 | 93 | 40 | 0 | 238 | 330 | 143 | 235 | 1.02e-35 | 130 |
Find 63 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTCCTAATAACAAAAT+TGG | 0.161907 | 1_1:+63212617 | Msa0035140:CDS |
| TATTCAAGAGCTAGTGAATT+TGG | 0.197215 | 1_1:-63216968 | None:intergenic |
| GCTGTTCGTCTTGTTCTTCC+TGG | 0.277831 | 1_1:+63216901 | Msa0035140:CDS |
| CTTGAAGATGTAGATCTTGT+AGG | 0.279657 | 1_1:-63216719 | None:intergenic |
| ACAGGGGAGGTGATCCGATT+TGG | 0.294906 | 1_1:+63212468 | Msa0035140:CDS |
| GATAGTGACTGCAACCAAAA+AGG | 0.295977 | 1_1:+63212559 | Msa0035140:CDS |
| TCAGTTGAGGATGCTTCCTT+TGG | 0.300529 | 1_1:-63216661 | None:intergenic |
| AACTTCTGGGCTTGCTCGCT+TGG | 0.327399 | 1_1:+63214208 | Msa0035140:CDS |
| GCGGGTTTCTTCTCTCCCTT+TGG | 0.352007 | 1_1:-63216580 | None:intergenic |
| TCAGCTGGTGCCTTCTCTGC+AGG | 0.357925 | 1_1:-63216613 | None:intergenic |
| TGCTTATTTCCTTCGACAAT+AGG | 0.359804 | 1_1:-63212710 | None:intergenic |
| CAGGGGAGGTGATCCGATTT+GGG | 0.371480 | 1_1:+63212469 | Msa0035140:CDS |
| CTTGCTCGCTTGGAGCTCGC+TGG | 0.378440 | 1_1:+63214218 | Msa0035140:CDS |
| CGGTATCTCAAGCAAGGCTA+TGG | 0.396652 | 1_1:+63216768 | Msa0035140:CDS |
| CTTGTTGTAGCGAGCAAGTC+TGG | 0.401541 | 1_1:-63216845 | None:intergenic |
| AACAACGACGTTGACAACTA+TGG | 0.412076 | 1_1:+63212412 | Msa0035140:CDS |
| CAGTTGAGGATGCTTCCTTT+GGG | 0.416445 | 1_1:-63216660 | None:intergenic |
| CGAAGGAAATAAGCAATTTG+AGG | 0.417191 | 1_1:+63212718 | Msa0035140:CDS |
| CTACAAGATCTACATCTTCA+AGG | 0.431521 | 1_1:+63216720 | Msa0035140:CDS |
| CCTCCATGTGGAACCCAAAT+CGG | 0.435821 | 1_1:-63212482 | None:intergenic |
| AATCTCCTAATAACAAAATT+GGG | 0.437760 | 1_1:+63212618 | Msa0035140:CDS |
| GACTGTTCGAATTGCTTGTC+AGG | 0.444513 | 1_1:+63212586 | Msa0035140:CDS |
| ACCATCCATGGGAGATAAAT+CGG | 0.448358 | 1_1:+63212286 | None:intergenic |
| CTTCTTCTTCTTATCAGTTG+AGG | 0.448679 | 1_1:-63216674 | None:intergenic |
| CATCTTCAAGGTTCTCAAGC+AGG | 0.470454 | 1_1:+63216732 | Msa0035140:CDS |
| TCTGCAGGCTTCTTCTCTGC+GGG | 0.470993 | 1_1:-63216598 | None:intergenic |
| AGAGAAGAAGCCTGCAGAGA+AGG | 0.499836 | 1_1:+63216603 | Msa0035140:CDS |
| CTCTGCAGGCTTCTTCTCTG+CGG | 0.503353 | 1_1:-63216599 | None:intergenic |
| CGCTGTCTCCGAGGGAACCA+AGG | 0.503914 | 1_1:+63216939 | Msa0035140:CDS |
| AGTGAATTTGGTGACAGCCT+TGG | 0.506012 | 1_1:-63216956 | None:intergenic |
| GGTGACAGCCTTGGTTCCCT+CGG | 0.507086 | 1_1:-63216947 | None:intergenic |
| TCAATCAACAATGGCACCAA+AGG | 0.515027 | 1_1:+63216564 | Msa0035140:CDS |
| TGAGGATTCAAGTTCTTCAA+AGG | 0.515294 | 1_1:+63212520 | Msa0035140:CDS |
| AGTCACCGATTTATCTCCCA+TGG | 0.516173 | 1_1:-63212291 | None:intergenic |
| AGGAGACAATCGAATTATTG+AGG | 0.519302 | 1_1:+63212502 | Msa0035140:CDS |
| TATCTTTGAGAAGCTTGCTC+AGG | 0.523401 | 1_1:+63216816 | Msa0035140:CDS |
| GCGTGCTTAGCGAGTTCACC+AGG | 0.523823 | 1_1:-63216919 | None:intergenic |
| GGTATCTCAAGCAAGGCTAT+GGG | 0.525343 | 1_1:+63216769 | Msa0035140:CDS |
| CAAAGCTCTGTCAGATCAGA+TGG | 0.528034 | 1_1:+63212340 | Msa0035140:CDS |
| TCTCCACTTTAATCTCCTCT+AGG | 0.542612 | 1_1:-63212682 | None:intergenic |
| TTGCTTGAGATACCGATGTC+AGG | 0.547522 | 1_1:-63216760 | None:intergenic |
| TGTCAACGTCGTTGTTGTTG+TGG | 0.549219 | 1_1:-63212405 | None:intergenic |
| CAATCAACAATGGCACCAAA+GGG | 0.556792 | 1_1:+63216565 | Msa0035140:CDS |
| CTGAATCTCACGAGAAGTGA+TGG | 0.558881 | 1_1:-63216875 | None:intergenic |
| TATCTGAGTCGTTGTTGTTG+TGG | 0.559445 | 1_1:-63212372 | None:intergenic |
| GAGAATATTCCTATTGTCGA+AGG | 0.564702 | 1_1:+63212701 | Msa0035140:CDS |
| GTACCTAGAGGAGATTAAAG+TGG | 0.572805 | 1_1:+63212679 | Msa0035140:CDS |
| CGCTAAGCACGCTGTCTCCG+AGG | 0.575955 | 1_1:+63216930 | Msa0035140:CDS |
| GATCCGATTTGGGTTCCACA+TGG | 0.593954 | 1_1:+63212479 | Msa0035140:CDS |
| TTCTTCAAAGGTAATAGAAG+AGG | 0.595711 | 1_1:+63212532 | Msa0035140:CDS |
| ACTTATTAACAATTATGATG+TGG | 0.597215 | 1_1:-63212658 | None:intergenic |
| ACTTGCTGCTCGCTTAAGCG+TGG | 0.603098 | 1_1:+63214247 | Msa0035140:CDS |
| GCTAAGCACGCTGTCTCCGA+GGG | 0.605983 | 1_1:+63216931 | Msa0035140:CDS |
| TGACATCGGTATCTCAAGCA+AGG | 0.623015 | 1_1:+63216762 | Msa0035140:CDS |
| TGTCAGCTTTCAATCAACAA+TGG | 0.652054 | 1_1:+63216555 | Msa0035140:CDS |
| CCGATTTGGGTTCCACATGG+AGG | 0.657880 | 1_1:+63212482 | Msa0035140:CDS |
| AACAACAACGACTCAGATAG+CGG | 0.659749 | 1_1:+63212376 | Msa0035140:CDS |
| ATTCGATTGTCTCCTCCATG+TGG | 0.660886 | 1_1:-63212494 | None:intergenic |
| AAGCAGGTTCATCCTGACAT+CGG | 0.661631 | 1_1:+63216748 | Msa0035140:CDS |
| AGCAGAGAAGAAGATCCCAA+AGG | 0.665852 | 1_1:+63216645 | Msa0035140:CDS |
| GTATCTCAAGCAAGGCTATG+GGG | 0.674185 | 1_1:+63216770 | Msa0035140:CDS |
| ATCTCACGAGAAGTGATGGT+AGG | 0.676602 | 1_1:-63216871 | None:intergenic |
| AATTGTTAATAAGTACCTAG+AGG | 0.710660 | 1_1:+63212667 | Msa0035140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAAAAAAAAAAATTTT+GGG | - | chr1_1:63216269-63216288 | None:intergenic | 0.0% |
| !!! | TTTAAAAAAAAAAAAAATTT+TGG | - | chr1_1:63216270-63216289 | None:intergenic | 0.0% |
| !! | AAAATACTATGAAATTAATA+AGG | - | chr1_1:63215924-63215943 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAATTTTGG+GGG | - | chr1_1:63216267-63216286 | None:intergenic | 10.0% |
| !! | ATATATATACTTGTGATAAT+TGG | - | chr1_1:63213280-63213299 | None:intergenic | 15.0% |
| !!! | GTTTATATGATTTCTAAAAA+TGG | - | chr1_1:63213916-63213935 | None:intergenic | 15.0% |
| !! | GTACATAATTATGAAAAATA+TGG | + | chr1_1:63215662-63215681 | Msa0035140:intron | 15.0% |
| !!! | TTTTTTCAGTTTGTTATTTT+CGG | + | chr1_1:63215976-63215995 | Msa0035140:intron | 15.0% |
| !!! | TTTATTTTTATAAATGGAGA+AGG | - | chr1_1:63216111-63216130 | None:intergenic | 15.0% |
| !! | TCTCCATTTATAAAAATAAA+TGG | + | chr1_1:63216111-63216130 | Msa0035140:intron | 15.0% |
| !!! | GTTTTTTTTTTAAAGTTTAG+GGG | - | chr1_1:63216304-63216323 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTAAAGTTTA+GGG | - | chr1_1:63216305-63216324 | None:intergenic | 15.0% |
| !!! | TCGTTTTTTTTTTAAAGTTT+AGG | - | chr1_1:63216306-63216325 | None:intergenic | 15.0% |
| !! | AATCTCCTAATAACAAAATT+GGG | + | chr1_1:63212618-63212637 | Msa0035140:CDS | 20.0% |
| !! | ACTTATTAACAATTATGATG+TGG | - | chr1_1:63212661-63212680 | None:intergenic | 20.0% |
| !! | TTATCGCTTAAATAGAAATA+GGG | - | chr1_1:63212774-63212793 | None:intergenic | 20.0% |
| !! | TTTATCGCTTAAATAGAAAT+AGG | - | chr1_1:63212775-63212794 | None:intergenic | 20.0% |
| !!! | TTGAACATAACTTTTGAAAA+TGG | - | chr1_1:63214008-63214027 | None:intergenic | 20.0% |
| !!! | GCTTTCTAAAATATTTCTTT+TGG | - | chr1_1:63214105-63214124 | None:intergenic | 20.0% |
| !! | TTGAATTTGTATGTCAAAAT+GGG | - | chr1_1:63214677-63214696 | None:intergenic | 20.0% |
| !!! | TTAAGTGGTTAATTTGATTT+TGG | - | chr1_1:63214772-63214791 | None:intergenic | 20.0% |
| !! | ACGGTAAAATGTAATAATAA+CGG | + | chr1_1:63215146-63215165 | Msa0035140:intron | 20.0% |
| !!! | TATTATTTTACTAAGTGCTA+GGG | - | chr1_1:63215205-63215224 | None:intergenic | 20.0% |
| !!! | TTATTATTTTACTAAGTGCT+AGG | - | chr1_1:63215206-63215225 | None:intergenic | 20.0% |
| !! | AGCACTTAGTAAAATAATAA+CGG | + | chr1_1:63215206-63215225 | Msa0035140:intron | 20.0% |
| !!! | GTAATTTAGTAATTTTGATG+AGG | - | chr1_1:63215255-63215274 | None:intergenic | 20.0% |
| !! | AATTAAATCTAGCGAAAAAT+CGG | + | chr1_1:63215421-63215440 | Msa0035140:intron | 20.0% |
| !!! | CTCTTTTTTCAAACTTAAAT+AGG | - | chr1_1:63216024-63216043 | None:intergenic | 20.0% |
| !!! | CCTCCATTTATTTTTATAAA+TGG | - | chr1_1:63216117-63216136 | None:intergenic | 20.0% |
| !! | CCATTTATAAAAATAAATGG+AGG | + | chr1_1:63216114-63216133 | Msa0035140:intron | 20.0% |
| !!! | TCGATTTCTTTTATTTAGAA+AGG | - | chr1_1:63216235-63216254 | None:intergenic | 20.0% |
| !! | GTTTATATAGAAATCGTTAA+TGG | - | chr1_1:63216437-63216456 | None:intergenic | 20.0% |
| ! | ATAACAAAAACAATCAGAAC+AGG | + | chr1_1:63212450-63212469 | Msa0035140:CDS | 25.0% |
| ! | TAACAAAAACAATCAGAACA+GGG | + | chr1_1:63212451-63212470 | Msa0035140:CDS | 25.0% |
| ! | CAATCTCCTAATAACAAAAT+TGG | + | chr1_1:63212617-63212636 | Msa0035140:CDS | 25.0% |
| !!! | GTAATCCCAATTTTGTTATT+AGG | - | chr1_1:63212626-63212645 | None:intergenic | 25.0% |
| ! | AATTGTTAATAAGTACCTAG+AGG | + | chr1_1:63212667-63212686 | Msa0035140:CDS | 25.0% |
| !!! | TTTATACATGCATGTTGTTT+TGG | - | chr1_1:63212849-63212868 | None:intergenic | 25.0% |
| !! | ATACCATGGAATGTATATTT+TGG | - | chr1_1:63212910-63212929 | None:intergenic | 25.0% |
| ! | CACAAAAACATCATTATCAA+CGG | + | chr1_1:63213433-63213452 | Msa0035140:intron | 25.0% |
| ! | AATTCAACGACTATAATCAA+TGG | + | chr1_1:63213547-63213566 | Msa0035140:intron | 25.0% |
| ! | ATCACTTTATAAATCTTTCG+TGG | - | chr1_1:63213617-63213636 | None:intergenic | 25.0% |
| ! | CGAAAGATTTATAAAGTGAT+CGG | + | chr1_1:63213617-63213636 | Msa0035140:intron | 25.0% |
| !!! | GCTTCAGTTATTTTGAAAAT+GGG | - | chr1_1:63213683-63213702 | None:intergenic | 25.0% |
| !!! | AGCTTCAGTTATTTTGAAAA+TGG | - | chr1_1:63213684-63213703 | None:intergenic | 25.0% |
| !! | ATTTTGTGATTCTCATGAAT+TGG | - | chr1_1:63213815-63213834 | None:intergenic | 25.0% |
| !!! | AACTTGTTTTGCTTTGAAAA+TGG | - | chr1_1:63213869-63213888 | None:intergenic | 25.0% |
| !! | TTTCTAAAAATGGTTGTGAT+TGG | - | chr1_1:63213906-63213925 | None:intergenic | 25.0% |
| !!! | CTTAACCATACTTTATTTTC+CGG | + | chr1_1:63213946-63213965 | Msa0035140:intron | 25.0% |
| ! | AGGTTTAAGTGTATAAATAG+AGG | + | chr1_1:63214070-63214089 | Msa0035140:intron | 25.0% |
| !!! | AAGAAATATTTTAGAAAGCC+TGG | + | chr1_1:63214106-63214125 | Msa0035140:intron | 25.0% |
| !!! | TTGGGATTTTTAGTGAAAAA+GGG | - | chr1_1:63214329-63214348 | None:intergenic | 25.0% |
| !!! | ATTGGGATTTTTAGTGAAAA+AGG | - | chr1_1:63214330-63214349 | None:intergenic | 25.0% |
| !! | GAGTAGTTTTTATGTGAAAT+TGG | - | chr1_1:63214641-63214660 | None:intergenic | 25.0% |
| ! | GTTGAATTTGTATGTCAAAA+TGG | - | chr1_1:63214678-63214697 | None:intergenic | 25.0% |
| ! | TTAGTGAAGAATTAAGGTAA+GGG | - | chr1_1:63214864-63214883 | None:intergenic | 25.0% |
| !! | TTTGAGTTAGTGAAGAATTA+AGG | - | chr1_1:63214870-63214889 | None:intergenic | 25.0% |
| ! | ATTCTTCACTAACTCAAATT+AGG | + | chr1_1:63214872-63214891 | Msa0035140:intron | 25.0% |
| ! | TTCTTCACTAACTCAAATTA+GGG | + | chr1_1:63214873-63214892 | Msa0035140:intron | 25.0% |
| ! | TCTAACACTAGAGTTTATAT+AGG | + | chr1_1:63215039-63215058 | Msa0035140:intron | 25.0% |
| ! | TTATATAGGCTCTACATAAT+TGG | + | chr1_1:63215053-63215072 | Msa0035140:intron | 25.0% |
| ! | TATATAGGCTCTACATAATT+GGG | + | chr1_1:63215054-63215073 | Msa0035140:intron | 25.0% |
| !! | TTTGAATTGGTTTAGTGAAT+GGG | - | chr1_1:63215109-63215128 | None:intergenic | 25.0% |
| !!! | TTTTGAATTGGTTTAGTGAA+TGG | - | chr1_1:63215110-63215129 | None:intergenic | 25.0% |
| !! | ATTACATTTTACCGTTAAGT+GGG | - | chr1_1:63215141-63215160 | None:intergenic | 25.0% |
| !! | TATTACATTTTACCGTTAAG+TGG | - | chr1_1:63215142-63215161 | None:intergenic | 25.0% |
| ! | TGTAGTGAATTGTTTATAAC+CGG | - | chr1_1:63215179-63215198 | None:intergenic | 25.0% |
| !!! | TTTTAGTCATTTTGGACTAA+GGG | - | chr1_1:63215304-63215323 | None:intergenic | 25.0% |
| !!! | ATTTTAGTCATTTTGGACTA+AGG | - | chr1_1:63215305-63215324 | None:intergenic | 25.0% |
| ! | ATTAAATCTAGCGAAAAATC+GGG | + | chr1_1:63215422-63215441 | Msa0035140:intron | 25.0% |
| !! | ATATTCTCTTTTGTGCTTAT+TGG | - | chr1_1:63215573-63215592 | None:intergenic | 25.0% |
| ! | ATATTTACCATGAATTATGG+AGG | - | chr1_1:63215600-63215619 | None:intergenic | 25.0% |
| ! | GCAATATTTACCATGAATTA+TGG | - | chr1_1:63215603-63215622 | None:intergenic | 25.0% |
| ! | ATATTTCTTCAATGGGATAA+AGG | + | chr1_1:63215729-63215748 | Msa0035140:intron | 25.0% |
| ! | AATGCAAAGATGATTTGATT+TGG | - | chr1_1:63215770-63215789 | None:intergenic | 25.0% |
| ! | GAAAATAACAAAACCCTAAT+TGG | - | chr1_1:63216002-63216021 | None:intergenic | 25.0% |
| AACAAAAACAATCAGAACAG+GGG | + | chr1_1:63212452-63212471 | Msa0035140:CDS | 30.0% | |
| TTCTTCAAAGGTAATAGAAG+AGG | + | chr1_1:63212532-63212551 | Msa0035140:CDS | 30.0% | |
| ! | CAATTTGAGGTTGTAAACAA+GGG | + | chr1_1:63212731-63212750 | Msa0035140:intron | 30.0% |
| TCTCCAAAATATACATTCCA+TGG | + | chr1_1:63212904-63212923 | Msa0035140:intron | 30.0% | |
| !!! | GTTGATGTATTTTGATACCA+TGG | - | chr1_1:63212924-63212943 | None:intergenic | 30.0% |
| TTGTTCTGTGAATGTGTATA+TGG | - | chr1_1:63213255-63213274 | None:intergenic | 30.0% | |
| CATCATCATTCTTCATACAA+CGG | + | chr1_1:63213315-63213334 | Msa0035140:intron | 30.0% | |
| AGTATAGGTGCATATTACAT+TGG | - | chr1_1:63213359-63213378 | None:intergenic | 30.0% | |
| !!! | CGTTGATAATGATGTTTTTG+TGG | - | chr1_1:63213435-63213454 | None:intergenic | 30.0% |
| AATTGTTGTGAACATATGCA+TGG | - | chr1_1:63213531-63213550 | None:intergenic | 30.0% | |
| AGTATACAATTACGTTTCAC+CGG | + | chr1_1:63213779-63213798 | Msa0035140:intron | 30.0% | |
| CGGAAAATAAAGTATGGTTA+AGG | - | chr1_1:63213948-63213967 | None:intergenic | 30.0% | |
| TTTCTCCGGAAAATAAAGTA+TGG | - | chr1_1:63213954-63213973 | None:intergenic | 30.0% | |
| ACTTAAACCTACTAGAACAT+CGG | - | chr1_1:63214060-63214079 | None:intergenic | 30.0% | |
| !! | ATATTTTAGAAAGCCTGGAT+TGG | + | chr1_1:63214111-63214130 | Msa0035140:intron | 30.0% |
| !! | AAAATCAAGTTTTGCTGTAC+AGG | + | chr1_1:63214154-63214173 | Msa0035140:intron | 30.0% |
| !!! | GATTTTTAGTGAAAAAGGGT+TGG | - | chr1_1:63214325-63214344 | None:intergenic | 30.0% |
| ! | GGTTTGGAATGATCAAAATT+GGG | - | chr1_1:63214347-63214366 | None:intergenic | 30.0% |
| TGTTGTTGAATTGATGCAAT+GGG | - | chr1_1:63214542-63214561 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGAATTGATGCAA+TGG | - | chr1_1:63214543-63214562 | None:intergenic | 30.0% |
| AATTGCTTATTGTGGTTAAG+TGG | - | chr1_1:63214787-63214806 | None:intergenic | 30.0% | |
| AAGCAATTATGCAAGGAAAT+AGG | + | chr1_1:63214799-63214818 | Msa0035140:intron | 30.0% | |
| AGCAATTATGCAAGGAAATA+GGG | + | chr1_1:63214800-63214819 | Msa0035140:intron | 30.0% | |
| TAGTGAAGAATTAAGGTAAG+GGG | - | chr1_1:63214863-63214882 | None:intergenic | 30.0% | |
| GTTAGTGAAGAATTAAGGTA+AGG | - | chr1_1:63214865-63214884 | None:intergenic | 30.0% | |
| !! | TTTCACAATTTTGAGAGAAG+AGG | - | chr1_1:63214997-63215016 | None:intergenic | 30.0% |
| CTCTAGTGTTAGAGAAAATA+GGG | - | chr1_1:63215032-63215051 | None:intergenic | 30.0% | |
| ACTCTAGTGTTAGAGAAAAT+AGG | - | chr1_1:63215033-63215052 | None:intergenic | 30.0% | |
| TCAAATCACAATGCCTTAAT+GGG | + | chr1_1:63215078-63215097 | Msa0035140:intron | 30.0% | |
| TAATAATAACGGTCACTTAC+CGG | + | chr1_1:63215157-63215176 | Msa0035140:intron | 30.0% | |
| !! | TTTTGGTCATTTTGTGAGTA+GGG | - | chr1_1:63215278-63215297 | None:intergenic | 30.0% |
| !! | ATTTTGGTCATTTTGTGAGT+AGG | - | chr1_1:63215279-63215298 | None:intergenic | 30.0% |
| !! | TTTAGTCATTTTGGACTAAG+GGG | - | chr1_1:63215303-63215322 | None:intergenic | 30.0% |
| !!! | GAAGGGTATTTTAGTCATTT+TGG | - | chr1_1:63215312-63215331 | None:intergenic | 30.0% |
| ! | TGGTTTGGAATTGTAGAATT+CGG | - | chr1_1:63215340-63215359 | None:intergenic | 30.0% |
| TATTACACCTCCATAATTCA+TGG | + | chr1_1:63215590-63215609 | Msa0035140:intron | 30.0% | |
| AAATATTGCCCACGATAAAA+CGG | + | chr1_1:63215614-63215633 | Msa0035140:intron | 30.0% | |
| ATGCTGCTATATTTCTTCAA+TGG | + | chr1_1:63215721-63215740 | Msa0035140:intron | 30.0% | |
| TGCTGCTATATTTCTTCAAT+GGG | + | chr1_1:63215722-63215741 | Msa0035140:intron | 30.0% | |
| !!! | TTTGTTATTTTCGGCCAATT+AGG | + | chr1_1:63215985-63216004 | Msa0035140:intron | 30.0% |
| !!! | TTGTTATTTTCGGCCAATTA+GGG | + | chr1_1:63215986-63216005 | Msa0035140:intron | 30.0% |
| ! | GAAGGTTATGAATCGAATTT+TGG | - | chr1_1:63216093-63216112 | None:intergenic | 30.0% |
| AGGAGACAATCGAATTATTG+AGG | + | chr1_1:63212502-63212521 | Msa0035140:CDS | 35.0% | |
| ! | TGAGGATTCAAGTTCTTCAA+AGG | + | chr1_1:63212520-63212539 | Msa0035140:CDS | 35.0% |
| ATAGTGACTGCAACCAAAAA+GGG | + | chr1_1:63212560-63212579 | Msa0035140:CDS | 35.0% | |
| GAGAATATTCCTATTGTCGA+AGG | + | chr1_1:63212701-63212720 | Msa0035140:CDS | 35.0% | |
| TGCTTATTTCCTTCGACAAT+AGG | - | chr1_1:63212713-63212732 | None:intergenic | 35.0% | |
| CGAAGGAAATAAGCAATTTG+AGG | + | chr1_1:63212718-63212737 | Msa0035140:CDS | 35.0% | |
| ! | GCAATTTGAGGTTGTAAACA+AGG | + | chr1_1:63212730-63212749 | Msa0035140:intron | 35.0% |
| ATATACTCATCCATACAGAC+AGG | + | chr1_1:63213119-63213138 | Msa0035140:intron | 35.0% | |
| ! | TTGCTCATGTTGATTAGTGA+AGG | - | chr1_1:63213225-63213244 | None:intergenic | 35.0% |
| !! | TGATGTTTTTGTGGCATCAT+GGG | - | chr1_1:63213426-63213445 | None:intergenic | 35.0% |
| !! | ATGATGTTTTTGTGGCATCA+TGG | - | chr1_1:63213427-63213446 | None:intergenic | 35.0% |
| TTATCAACGGCTATAGTCAA+CGG | + | chr1_1:63213446-63213465 | Msa0035140:intron | 35.0% | |
| ! | TTATAAAGTGATCGGCTCAA+AGG | + | chr1_1:63213625-63213644 | Msa0035140:intron | 35.0% |
| TAGACGAAATTGGTTGGAAA+TGG | - | chr1_1:63213653-63213672 | None:intergenic | 35.0% | |
| TAACGATAGACGAAATTGGT+TGG | - | chr1_1:63213659-63213678 | None:intergenic | 35.0% | |
| !! | GGATCTTGTTTACTTGGTTT+TGG | - | chr1_1:63213713-63213732 | None:intergenic | 35.0% |
| !!! | TTCTGAAACTCGTTTTTCTC+CGG | - | chr1_1:63213968-63213987 | None:intergenic | 35.0% |
| TTCAGAAAAATCGACGTTCA+TGG | + | chr1_1:63213981-63214000 | Msa0035140:intron | 35.0% | |
| CTTAAACCTACTAGAACATC+GGG | - | chr1_1:63214059-63214078 | None:intergenic | 35.0% | |
| ! | ATTTTTCGTTTCGTGCACTT+GGG | - | chr1_1:63214139-63214158 | None:intergenic | 35.0% |
| TGCAAGTTCCAAAAACTTCT+GGG | + | chr1_1:63214195-63214214 | Msa0035140:CDS | 35.0% | |
| TCTGTCAAAAATCCAGTTAC+AGG | + | chr1_1:63214297-63214316 | Msa0035140:intron | 35.0% | |
| ! | GGGTTTGGAATGATCAAAAT+TGG | - | chr1_1:63214348-63214367 | None:intergenic | 35.0% |
| !!! | ATCTTTTGGGTTGAGTTTTG+GGG | - | chr1_1:63214368-63214387 | None:intergenic | 35.0% |
| !!! | CATCTTTTGGGTTGAGTTTT+GGG | - | chr1_1:63214369-63214388 | None:intergenic | 35.0% |
| !!! | ACATCTTTTGGGTTGAGTTT+TGG | - | chr1_1:63214370-63214389 | None:intergenic | 35.0% |
| TCAACCCAAAAGATGTTTAC+AGG | + | chr1_1:63214374-63214393 | Msa0035140:intron | 35.0% | |
| CAACCCAAAAGATGTTTACA+GGG | + | chr1_1:63214375-63214394 | Msa0035140:intron | 35.0% | |
| ! | TGACCCTGTAAACATCTTTT+GGG | - | chr1_1:63214381-63214400 | None:intergenic | 35.0% |
| ! | ATGACCCTGTAAACATCTTT+TGG | - | chr1_1:63214382-63214401 | None:intergenic | 35.0% |
| !! | ATTGGTGATGAATGAAGTTG+TGG | - | chr1_1:63214623-63214642 | None:intergenic | 35.0% |
| CCTTGCATAATTGCTTATTG+TGG | - | chr1_1:63214795-63214814 | None:intergenic | 35.0% | |
| CCACAATAAGCAATTATGCA+AGG | + | chr1_1:63214792-63214811 | Msa0035140:intron | 35.0% | |
| AGTGAAGAATTAAGGTAAGG+GGG | - | chr1_1:63214862-63214881 | None:intergenic | 35.0% | |
| CTCAAATCACAATGCCTTAA+TGG | + | chr1_1:63215077-63215096 | Msa0035140:intron | 35.0% | |
| ! | ATTGGTTTAGTGAATGGGTT+AGG | - | chr1_1:63215104-63215123 | None:intergenic | 35.0% |
| ! | TGGGTAGTGACATTTTGAAT+TGG | - | chr1_1:63215122-63215141 | None:intergenic | 35.0% |
| AAATGTCACTACCCACTTAA+CGG | + | chr1_1:63215127-63215146 | Msa0035140:intron | 35.0% | |
| !! | TTTGGTCATTTTGTGAGTAG+GGG | - | chr1_1:63215277-63215296 | None:intergenic | 35.0% |
| !!! | TTTTGGACTAAGGGGTATTT+TGG | - | chr1_1:63215295-63215314 | None:intergenic | 35.0% |
| !! | TGTAGAATTCGGTGTTAGAA+GGG | - | chr1_1:63215329-63215348 | None:intergenic | 35.0% |
| !! | TTGTAGAATTCGGTGTTAGA+AGG | - | chr1_1:63215330-63215349 | None:intergenic | 35.0% |
| ! | AATTGCCTCTGTGTGTATTT+TGG | - | chr1_1:63215360-63215379 | None:intergenic | 35.0% |
| TTGTTGATACAACTTGTGAG+TGG | + | chr1_1:63215522-63215541 | Msa0035140:intron | 35.0% | |
| ! | GTGAGTGGATTTCAAAAGTA+TGG | + | chr1_1:63215537-63215556 | Msa0035140:intron | 35.0% |
| TATGGCAGAGACTAAAATGA+TGG | + | chr1_1:63215680-63215699 | Msa0035140:intron | 35.0% | |
| TTCATTCAATGAGATCCAAG+AGG | + | chr1_1:63215789-63215808 | Msa0035140:intron | 35.0% | |
| TCATTCAATGAGATCCAAGA+GGG | + | chr1_1:63215790-63215809 | Msa0035140:intron | 35.0% | |
| TCTTTATGAGAACGAGAACT+CGG | + | chr1_1:63215854-63215873 | Msa0035140:intron | 35.0% | |
| !! | GAGCATGTTGGTTTAAGAAA+GGG | - | chr1_1:63216066-63216085 | None:intergenic | 35.0% |
| !! | AGAGCATGTTGGTTTAAGAA+AGG | - | chr1_1:63216067-63216086 | None:intergenic | 35.0% |
| !! | AATTTTGGTGTAGAGCATGT+TGG | - | chr1_1:63216078-63216097 | None:intergenic | 35.0% |
| ! | TTTTTGAACGTCAGAGTCTT+CGG | - | chr1_1:63216351-63216370 | None:intergenic | 35.0% |
| !!! | TTGGTTGGTTTTAGAATTCG+CGG | - | chr1_1:63216407-63216426 | None:intergenic | 35.0% |
| AATCGTTAATGGTCTCTGAT+TGG | - | chr1_1:63216426-63216445 | None:intergenic | 35.0% | |
| ! | TGAATTGTGATTTTGCGCTT+GGG | - | chr1_1:63216469-63216488 | None:intergenic | 35.0% |
| ! | TTGAATTGTGATTTTGCGCT+TGG | - | chr1_1:63216470-63216489 | None:intergenic | 35.0% |
| TGTCAGCTTTCAATCAACAA+TGG | + | chr1_1:63216555-63216574 | Msa0035140:CDS | 35.0% | |
| CTTCTTCTTCTTATCAGTTG+AGG | - | chr1_1:63216677-63216696 | None:intergenic | 35.0% | |
| CTTGAAGATGTAGATCTTGT+AGG | - | chr1_1:63216722-63216741 | None:intergenic | 35.0% | |
| CTACAAGATCTACATCTTCA+AGG | + | chr1_1:63216720-63216739 | Msa0035140:CDS | 35.0% | |
| ! | TATCTGAGTCGTTGTTGTTG+TGG | - | chr1_1:63212375-63212394 | None:intergenic | 40.0% |
| AACAACAACGACTCAGATAG+CGG | + | chr1_1:63212376-63212395 | Msa0035140:CDS | 40.0% | |
| AACAACGACGTTGACAACTA+TGG | + | chr1_1:63212412-63212431 | Msa0035140:CDS | 40.0% | |
| AAAAACAATCAGAACAGGGG+AGG | + | chr1_1:63212455-63212474 | Msa0035140:CDS | 40.0% | |
| GATAGTGACTGCAACCAAAA+AGG | + | chr1_1:63212559-63212578 | Msa0035140:CDS | 40.0% | |
| GTACCTAGAGGAGATTAAAG+TGG | + | chr1_1:63212679-63212698 | Msa0035140:CDS | 40.0% | |
| TCTCCACTTTAATCTCCTCT+AGG | - | chr1_1:63212685-63212704 | None:intergenic | 40.0% | |
| AAATATCTCAACAGTCGCAG+CGG | + | chr1_1:63212867-63212886 | Msa0035140:intron | 40.0% | |
| ! | TCGGTGTCTTATGTTGTTGT+TGG | - | chr1_1:63213001-63213020 | None:intergenic | 40.0% |
| ! | TTAGGCTCTGATTAGGTTGT+CGG | - | chr1_1:63213020-63213039 | None:intergenic | 40.0% |
| CTACGACTCCAAAACGATAA+CGG | + | chr1_1:63213042-63213061 | Msa0035140:intron | 40.0% | |
| !! | TCCAAAACGATAACGGAGAT+TGG | + | chr1_1:63213049-63213068 | Msa0035140:intron | 40.0% |
| TTTGGTGAGTGCTTAGATAG+CGG | - | chr1_1:63213078-63213097 | None:intergenic | 40.0% | |
| TGGATGAGTATATGTTGTGC+AGG | - | chr1_1:63213112-63213131 | None:intergenic | 40.0% | |
| TGTGATACCAAATCTCCTCA+AGG | + | chr1_1:63213394-63213413 | Msa0035140:intron | 40.0% | |
| TGTTGTGAACATATGCATGG+TGG | - | chr1_1:63213528-63213547 | None:intergenic | 40.0% | |
| GGGATAACGATAGACGAAAT+TGG | - | chr1_1:63213663-63213682 | None:intergenic | 40.0% | |
| ! | GGCATTGGATCTTGTTTACT+TGG | - | chr1_1:63213719-63213738 | None:intergenic | 40.0% |
| GGTATACTTAGTTGAGGCAT+TGG | - | chr1_1:63213734-63213753 | None:intergenic | 40.0% | |
| ! | CCTAGAGGTATACTTAGTTG+AGG | - | chr1_1:63213740-63213759 | None:intergenic | 40.0% |
| CCTCAACTAAGTATACCTCT+AGG | + | chr1_1:63213737-63213756 | Msa0035140:intron | 40.0% | |
| TGCACTTATATGTAGCCTAG+AGG | - | chr1_1:63213755-63213774 | None:intergenic | 40.0% | |
| ATGAATTGGTCGTGTTTAGC+CGG | - | chr1_1:63213801-63213820 | None:intergenic | 40.0% | |
| ! | TTTTTCGTTTCGTGCACTTG+GGG | - | chr1_1:63214138-63214157 | None:intergenic | 40.0% |
| ! | GATTTTTCGTTTCGTGCACT+TGG | - | chr1_1:63214140-63214159 | None:intergenic | 40.0% |
| !! | ATCAAGTTTTGCTGTACAGG+AGG | + | chr1_1:63214157-63214176 | Msa0035140:intron | 40.0% |
| !! | TCAAGTTTTGCTGTACAGGA+GGG | + | chr1_1:63214158-63214177 | Msa0035140:intron | 40.0% |
| GTGCAAGTTCCAAAAACTTC+TGG | + | chr1_1:63214194-63214213 | Msa0035140:CDS | 40.0% | |
| ! | GATTTTTGACAGACTGAAGC+AGG | - | chr1_1:63214290-63214309 | None:intergenic | 40.0% |
| TGTGGAAAGTTGTGAGAGTT+TGG | - | chr1_1:63214479-63214498 | None:intergenic | 40.0% | |
| !! | TGACGAGTTTGTTGTTGTTG+TGG | - | chr1_1:63214497-63214516 | None:intergenic | 40.0% |
| AGAAGAGAAGGGTTTGAAGA+AGG | - | chr1_1:63214955-63214974 | None:intergenic | 40.0% | |
| AAGAGCAAGAGAGAAGAGAA+GGG | - | chr1_1:63214966-63214985 | None:intergenic | 40.0% | |
| AAAGAGCAAGAGAGAAGAGA+AGG | - | chr1_1:63214967-63214986 | None:intergenic | 40.0% | |
| !!! | CCTCTGTGTGTATTTTGGTT+TGG | - | chr1_1:63215355-63215374 | None:intergenic | 40.0% |
| CCAAACCAAAATACACACAG+AGG | + | chr1_1:63215352-63215371 | Msa0035140:intron | 40.0% | |
| GTACTTTCCAGCAAAAGACA+CGG | - | chr1_1:63215646-63215665 | None:intergenic | 40.0% | |
| ATGATTCCTCCCATGAACAA+GGG | - | chr1_1:63215820-63215839 | None:intergenic | 40.0% | |
| CTTTATGAGAACGAGAACTC+GGG | + | chr1_1:63215855-63215874 | Msa0035140:intron | 40.0% | |
| TTTATGAGAACGAGAACTCG+GGG | + | chr1_1:63215856-63215875 | Msa0035140:intron | 40.0% | |
| ! | GTCAAGTTCTTTAGAAGTGG+AGG | + | chr1_1:63215878-63215897 | Msa0035140:intron | 40.0% |
| TGGAGGAGATTGATGTAGTA+GGG | + | chr1_1:63215895-63215914 | Msa0035140:intron | 40.0% | |
| ! | TGACGTGGATGCTTCATTTT+GGG | - | chr1_1:63216379-63216398 | None:intergenic | 40.0% |
| ! | ATGACGTGGATGCTTCATTT+TGG | - | chr1_1:63216380-63216399 | None:intergenic | 40.0% |
| GTTAATGGTCTCTGATTGGT+TGG | - | chr1_1:63216422-63216441 | None:intergenic | 40.0% | |
| TCAATCAACAATGGCACCAA+AGG | + | chr1_1:63216564-63216583 | Msa0035140:CDS | 40.0% | |
| CAATCAACAATGGCACCAAA+GGG | + | chr1_1:63216565-63216584 | Msa0035140:CDS | 40.0% | |
| ! | TATCTTTGAGAAGCTTGCTC+AGG | + | chr1_1:63216816-63216835 | Msa0035140:CDS | 40.0% |
| CAAAGCTCTGTCAGATCAGA+TGG | + | chr1_1:63212340-63212359 | Msa0035140:CDS | 45.0% | |
| ! | TGTCAACGTCGTTGTTGTTG+TGG | - | chr1_1:63212408-63212427 | None:intergenic | 45.0% |
| ATTCGATTGTCTCCTCCATG+TGG | - | chr1_1:63212497-63212516 | None:intergenic | 45.0% | |
| GACTGTTCGAATTGCTTGTC+AGG | + | chr1_1:63212586-63212605 | Msa0035140:CDS | 45.0% | |
| ATTCTCCAAGTCTCGACAAG+TGG | + | chr1_1:63212950-63212969 | Msa0035140:intron | 45.0% | |
| TTCTCCAAGTCTCGACAAGT+GGG | + | chr1_1:63212951-63212970 | Msa0035140:intron | 45.0% | |
| ! | TTTTCCCACTTGTCGAGACT+TGG | - | chr1_1:63212958-63212977 | None:intergenic | 45.0% |
| ! | CGTAGGTTTAGGCTCTGATT+AGG | - | chr1_1:63213027-63213046 | None:intergenic | 45.0% |
| !!! | CGTTTTGGAGTCGTAGGTTT+AGG | - | chr1_1:63213038-63213057 | None:intergenic | 45.0% |
| !!! | CGTTATCGTTTTGGAGTCGT+AGG | - | chr1_1:63213044-63213063 | None:intergenic | 45.0% |
| ! | GCCAATCTCCGTTATCGTTT+TGG | - | chr1_1:63213053-63213072 | None:intergenic | 45.0% |
| TTGGTGAGTGCTTAGATAGC+GGG | - | chr1_1:63213077-63213096 | None:intergenic | 45.0% | |
| ACTCATCCATACAGACAGGT+AGG | + | chr1_1:63213123-63213142 | Msa0035140:intron | 45.0% | |
| ACTGTAAAGCTAACCTCCAG+TGG | - | chr1_1:63213158-63213177 | None:intergenic | 45.0% | |
| TGCATGTATGCGTCGAGTAT+AGG | - | chr1_1:63213374-63213393 | None:intergenic | 45.0% | |
| GGCTATAGTCAACGGCAATA+TGG | + | chr1_1:63213454-63213473 | Msa0035140:intron | 45.0% | |
| GAACATCGGGTGAATCGAAT+TGG | - | chr1_1:63214046-63214065 | None:intergenic | 45.0% | |
| GATTCACCCGATGTTCTAGT+AGG | + | chr1_1:63214050-63214069 | Msa0035140:intron | 45.0% | |
| AAAGGGTTGGAACCTGTAAC+TGG | - | chr1_1:63214312-63214331 | None:intergenic | 45.0% | |
| !!! | TTGGGTTGAGTTTTGGGGTT+TGG | - | chr1_1:63214363-63214382 | None:intergenic | 45.0% |
| ! | GTGAGAGTTTGGTGAATTCG+TGG | - | chr1_1:63214468-63214487 | None:intergenic | 45.0% |
| GAAGGTAGAGCTTCAAGGAT+TGG | - | chr1_1:63214912-63214931 | None:intergenic | 45.0% | |
| TAGAGGAAGGTAGAGCTTCA+AGG | - | chr1_1:63214917-63214936 | None:intergenic | 45.0% | |
| !! | TGAATGGGTTAGGCCCATTA+AGG | - | chr1_1:63215094-63215113 | None:intergenic | 45.0% |
| TCGACTACAGTTCGAAAAGC+AGG | - | chr1_1:63215467-63215486 | None:intergenic | 45.0% | |
| TTCAATGAGATCCAAGAGGG+CGG | + | chr1_1:63215793-63215812 | Msa0035140:intron | 45.0% | |
| GATGATTCCTCCCATGAACA+AGG | - | chr1_1:63215821-63215840 | None:intergenic | 45.0% | |
| ! | GGGGTCAAGTTCTTTAGAAG+TGG | + | chr1_1:63215875-63215894 | Msa0035140:intron | 45.0% |
| GTGGAGGAGATTGATGTAGT+AGG | + | chr1_1:63215894-63215913 | Msa0035140:intron | 45.0% | |
| ! | ACGTGGATGCTTCATTTTGG+GGG | - | chr1_1:63216377-63216396 | None:intergenic | 45.0% |
| ! | GACGTGGATGCTTCATTTTG+GGG | - | chr1_1:63216378-63216397 | None:intergenic | 45.0% |
| ! | TCTGCTTTCGTTTTCTCAGC+TGG | - | chr1_1:63216631-63216650 | None:intergenic | 45.0% |
| AGCAGAGAAGAAGATCCCAA+AGG | + | chr1_1:63216645-63216664 | Msa0035140:CDS | 45.0% | |
| CAGTTGAGGATGCTTCCTTT+GGG | - | chr1_1:63216663-63216682 | None:intergenic | 45.0% | |
| TCAGTTGAGGATGCTTCCTT+TGG | - | chr1_1:63216664-63216683 | None:intergenic | 45.0% | |
| CATCTTCAAGGTTCTCAAGC+AGG | + | chr1_1:63216732-63216751 | Msa0035140:CDS | 45.0% | |
| AAGCAGGTTCATCCTGACAT+CGG | + | chr1_1:63216748-63216767 | Msa0035140:CDS | 45.0% | |
| TTGCTTGAGATACCGATGTC+AGG | - | chr1_1:63216763-63216782 | None:intergenic | 45.0% | |
| TGACATCGGTATCTCAAGCA+AGG | + | chr1_1:63216762-63216781 | Msa0035140:CDS | 45.0% | |
| GGTATCTCAAGCAAGGCTAT+GGG | + | chr1_1:63216769-63216788 | Msa0035140:CDS | 45.0% | |
| GTATCTCAAGCAAGGCTATG+GGG | + | chr1_1:63216770-63216789 | Msa0035140:CDS | 45.0% | |
| ATCTCACGAGAAGTGATGGT+AGG | - | chr1_1:63216874-63216893 | None:intergenic | 45.0% | |
| CTGAATCTCACGAGAAGTGA+TGG | - | chr1_1:63216878-63216897 | None:intergenic | 45.0% | |
| ! | AGTGAATTTGGTGACAGCCT+TGG | - | chr1_1:63216959-63216978 | None:intergenic | 45.0% |
| !! | AAAAGAAAATTATTAAAATT+AGG | - | chr1_1:63215955-63215974 | None:intergenic | 5.0% |
| !! | ATATATAAAATAATTAATAG+CGG | - | chr1_1:63216184-63216203 | None:intergenic | 5.0% |
| !!! | TAAAAAAAAAAAAAATTTTG+GGG | - | chr1_1:63216268-63216287 | None:intergenic | 5.0% |
| !! | GATCCGATTTGGGTTCCACA+TGG | + | chr1_1:63212479-63212498 | Msa0035140:CDS | 50.0% |
| CCTCCATGTGGAACCCAAAT+CGG | - | chr1_1:63212485-63212504 | None:intergenic | 50.0% | |
| ! | TCGAACAGTCGCACCCTTTT+TGG | - | chr1_1:63212576-63212595 | None:intergenic | 50.0% |
| ! | GTGCAGGAGTAGTTCGCTTT+TGG | - | chr1_1:63213096-63213115 | None:intergenic | 50.0% |
| CATCCATACAGACAGGTAGG+CGG | + | chr1_1:63213126-63213145 | Msa0035140:intron | 50.0% | |
| GTGACGACCTTGAGGAGATT+TGG | - | chr1_1:63213404-63213423 | None:intergenic | 50.0% | |
| ! | CGAGCAAGCCCAGAAGTTTT+TGG | - | chr1_1:63214206-63214225 | None:intergenic | 50.0% |
| AGCTAGAGAGAGCTAGAGGA+AGG | - | chr1_1:63214930-63214949 | None:intergenic | 50.0% | |
| GGAAAGCTAGAGAGAGCTAG+AGG | - | chr1_1:63214934-63214953 | None:intergenic | 50.0% | |
| ! | GGTTGCGACCGTTTTATCGT+GGG | - | chr1_1:63215625-63215644 | None:intergenic | 50.0% |
| ! | TTTTGCGCTTGGGTGTGGAA+TGG | - | chr1_1:63216459-63216478 | None:intergenic | 50.0% |
| ! | TGTGATTTTGCGCTTGGGTG+TGG | - | chr1_1:63216464-63216483 | None:intergenic | 50.0% |
| AGAGAAGAAGCCTGCAGAGA+AGG | + | chr1_1:63216603-63216622 | Msa0035140:CDS | 50.0% | |
| CGGTATCTCAAGCAAGGCTA+TGG | + | chr1_1:63216768-63216787 | Msa0035140:CDS | 50.0% | |
| ! | CTTGTTGTAGCGAGCAAGTC+TGG | - | chr1_1:63216848-63216867 | None:intergenic | 50.0% |
| ! | GCTGTTCGTCTTGTTCTTCC+TGG | + | chr1_1:63216901-63216920 | Msa0035140:CDS | 50.0% |
| ACAGGGGAGGTGATCCGATT+TGG | + | chr1_1:63212468-63212487 | Msa0035140:CDS | 55.0% | |
| CAGGGGAGGTGATCCGATTT+GGG | + | chr1_1:63212469-63212488 | Msa0035140:CDS | 55.0% | |
| !! | CCGATTTGGGTTCCACATGG+AGG | + | chr1_1:63212482-63212501 | Msa0035140:CDS | 55.0% |
| TGACCGCCTACCTGTCTGTA+TGG | - | chr1_1:63213132-63213151 | None:intergenic | 55.0% | |
| AGGTAGGCGGTCAAAACCAC+TGG | + | chr1_1:63213139-63213158 | Msa0035140:intron | 55.0% | |
| TAGGCGGTCAAAACCACTGG+AGG | + | chr1_1:63213142-63213161 | Msa0035140:intron | 55.0% | |
| CATCATGGGTGACGACCTTG+AGG | - | chr1_1:63213412-63213431 | None:intergenic | 55.0% | |
| ! | AACTTCTGGGCTTGCTCGCT+TGG | + | chr1_1:63214208-63214227 | Msa0035140:CDS | 55.0% |
| ! | ACTTGCTGCTCGCTTAAGCG+TGG | + | chr1_1:63214247-63214266 | Msa0035140:CDS | 55.0% |
| ! | CGGTTGCGACCGTTTTATCG+TGG | - | chr1_1:63215626-63215645 | None:intergenic | 55.0% |
| ! | GTCGCAACCGTGTCTTTTGC+TGG | + | chr1_1:63215636-63215655 | Msa0035140:intron | 55.0% |
| GAATTCGCGGATCGATGACG+TGG | - | chr1_1:63216394-63216413 | None:intergenic | 55.0% | |
| GCGGGTTTCTTCTCTCCCTT+TGG | - | chr1_1:63216583-63216602 | None:intergenic | 55.0% | |
| TCTGCAGGCTTCTTCTCTGC+GGG | - | chr1_1:63216601-63216620 | None:intergenic | 55.0% | |
| CTCTGCAGGCTTCTTCTCTG+CGG | - | chr1_1:63216602-63216621 | None:intergenic | 55.0% | |
| GTGCACTTGGGGACCAATCC+AGG | - | chr1_1:63214127-63214146 | None:intergenic | 60.0% | |
| TGAACAAGGGACCGCCCTCT+TGG | - | chr1_1:63215807-63215826 | None:intergenic | 60.0% | |
| AGAGGGCGGTCCCTTGTTCA+TGG | + | chr1_1:63215807-63215826 | Msa0035140:intron | 60.0% | |
| GAGGGCGGTCCCTTGTTCAT+GGG | + | chr1_1:63215808-63215827 | Msa0035140:intron | 60.0% | |
| TCAGCTGGTGCCTTCTCTGC+AGG | - | chr1_1:63216616-63216635 | None:intergenic | 60.0% | |
| GCGTGCTTAGCGAGTTCACC+AGG | - | chr1_1:63216922-63216941 | None:intergenic | 60.0% | |
| GCTAAGCACGCTGTCTCCGA+GGG | + | chr1_1:63216931-63216950 | Msa0035140:CDS | 60.0% | |
| GGTGACAGCCTTGGTTCCCT+CGG | - | chr1_1:63216950-63216969 | None:intergenic | 60.0% | |
| CTTGCTCGCTTGGAGCTCGC+TGG | + | chr1_1:63214218-63214237 | Msa0035140:CDS | 65.0% | |
| GGCGGTCCCTTGTTCATGGG+AGG | + | chr1_1:63215811-63215830 | Msa0035140:intron | 65.0% | |
| CGCTAAGCACGCTGTCTCCG+AGG | + | chr1_1:63216930-63216949 | Msa0035140:CDS | 65.0% | |
| CGCTGTCTCCGAGGGAACCA+AGG | + | chr1_1:63216939-63216958 | Msa0035140:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 63212293 | 63216987 | 63212293 | ID=Msa0035140;Name=Msa0035140 |
| chr1_1 | mRNA | 63212293 | 63216987 | 63212293 | ID=Msa0035140-mRNA-1;Parent=Msa0035140;Name=Msa0035140-mRNA-1;_AED=0.22;_eAED=0.24;_QI=0|0|0|0.66|1|1|3|0|333 |
| chr1_1 | exon | 63212293 | 63212739 | 63212293 | ID=Msa0035140-mRNA-1:exon:20093;Parent=Msa0035140-mRNA-1 |
| chr1_1 | exon | 63214176 | 63214295 | 63214176 | ID=Msa0035140-mRNA-1:exon:20094;Parent=Msa0035140-mRNA-1 |
| chr1_1 | exon | 63216553 | 63216987 | 63216553 | ID=Msa0035140-mRNA-1:exon:20095;Parent=Msa0035140-mRNA-1 |
| chr1_1 | CDS | 63212293 | 63212739 | 63212293 | ID=Msa0035140-mRNA-1:cds;Parent=Msa0035140-mRNA-1 |
| chr1_1 | CDS | 63214176 | 63214295 | 63214176 | ID=Msa0035140-mRNA-1:cds;Parent=Msa0035140-mRNA-1 |
| chr1_1 | CDS | 63216553 | 63216987 | 63216553 | ID=Msa0035140-mRNA-1:cds;Parent=Msa0035140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
