Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921480 | XP_003619796.1 | 96.867 | 383 | 11 | 1 | 1 | 383 | 1 | 382 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921480 | sp|I6YEE1|PPTH_MYCTU | 28.159 | 277 | 168 | 9 | 60 | 324 | 17 | 274 | 9.20e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0466390 | Msa0921480 | 0.800821 | 1.203945e-48 | -8.615850e-47 |
| Msa0473240 | Msa0921480 | 0.809470 | 1.862686e-50 | -8.615850e-47 |
| Msa0921480 | Msa1351620 | 0.805758 | 1.143847e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921480 | MtrunA17_Chr6g0478201 | 96.867 | 383 | 11 | 1 | 1 | 383 | 1 | 382 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 95 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCATTTGGTTATCATTT+AGG | 0.085330 | 6_2:+58757461 | None:intergenic |
| TTCCATTTGGTTATCATTTA+GGG | 0.185581 | 6_2:+58757462 | None:intergenic |
| TTGACTGTTAGCTGCAATTA+TGG | 0.212931 | 6_2:-58760640 | Msa0921480:CDS |
| ATACTGTCTTCTGCAGCTTT+AGG | 0.222188 | 6_2:-58760586 | Msa0921480:CDS |
| AAGATCTATACATGGTGATA+TGG | 0.254342 | 6_2:-58756395 | Msa0921480:CDS |
| TGGGACAGTGTTAGAGAAAA+AGG | 0.264854 | 6_2:+58760703 | None:intergenic |
| TACTGTCTTCTGCAGCTTTA+GGG | 0.281515 | 6_2:-58760585 | Msa0921480:CDS |
| TCATTGTTCAATATACAAAA+AGG | 0.302804 | 6_2:-58760927 | Msa0921480:intron |
| ATAAACTCAATCCTTGCTTT+TGG | 0.315787 | 6_2:-58756088 | Msa0921480:CDS |
| TGTTGGGATGCTGTTGTAGA+TGG | 0.321829 | 6_2:-58756325 | Msa0921480:CDS |
| CCAACGGTTGTGGGTGCATT+AGG | 0.322070 | 6_2:-58759397 | Msa0921480:CDS |
| ATTCTTCTCTTCCTTTCCCT+TGG | 0.330943 | 6_2:+58756167 | None:intergenic |
| GAATGAATGGAGGGGAAAAT+TGG | 0.340413 | 6_2:-58756148 | Msa0921480:CDS |
| GAATCATTCCTTTGTTCTCT+TGG | 0.340769 | 6_2:-58759375 | Msa0921480:CDS |
| GTTTGATGATAATTCGTTAT+GGG | 0.344115 | 6_2:+58760970 | None:intergenic |
| TTGTCAGCATAAAGACAAAA+TGG | 0.347742 | 6_2:+58756122 | None:intergenic |
| TTCTTCTCTTCCTTTCCCTT+GGG | 0.352260 | 6_2:+58756168 | None:intergenic |
| CTTGATGCATGTAAGAGAAT+TGG | 0.384957 | 6_2:-58759433 | Msa0921480:CDS |
| AGGACTTCCATGCATGTAAC+TGG | 0.389010 | 6_2:-58757534 | Msa0921480:CDS |
| GCATCTTCTTGTCATGTGTT+TGG | 0.389414 | 6_2:-58756361 | Msa0921480:CDS |
| AGTTTGATGATAATTCGTTA+TGG | 0.406661 | 6_2:+58760969 | None:intergenic |
| TTTAGTGTCATTAGGTGTCC+TGG | 0.408259 | 6_2:+58756043 | None:intergenic |
| GGAATGCAAAGGTTTAATCT+TGG | 0.409670 | 6_2:-58760619 | Msa0921480:CDS |
| GAAAGGAAGAGAAGAATGAA+TGG | 0.421569 | 6_2:-58756161 | Msa0921480:CDS |
| TGACACTAAACTTGCTCCTT+GGG | 0.423217 | 6_2:-58756030 | Msa0921480:CDS |
| CCTTTCCCTTGGGTAAGCTA+AGG | 0.427224 | 6_2:+58756178 | None:intergenic |
| TGGTCATACTCACTTCTGTT+GGG | 0.431860 | 6_2:-58756341 | Msa0921480:CDS |
| GACAAAGAGAAGGACATAAC+AGG | 0.433848 | 6_2:-58759243 | Msa0921480:CDS |
| ATGACACTAAACTTGCTCCT+TGG | 0.436240 | 6_2:-58756031 | Msa0921480:CDS |
| CTTTCCCTTGGGTAAGCTAA+GGG | 0.443118 | 6_2:+58756179 | None:intergenic |
| TCTCCTGTATCATTTCCATT+TGG | 0.443236 | 6_2:+58757449 | None:intergenic |
| TTCCTGGGAATCATGACCTT+TGG | 0.446678 | 6_2:-58760363 | Msa0921480:CDS |
| TGGTGGATTGCGTGTGTTTG+TGG | 0.453301 | 6_2:-58760557 | Msa0921480:CDS |
| AGAGACAAATCCAACGGTTG+TGG | 0.457003 | 6_2:-58759407 | Msa0921480:CDS |
| GGAGCAAGTTTAGTGTCATT+AGG | 0.460428 | 6_2:+58756035 | None:intergenic |
| ATCTCCATTTGAAAGTCCAT+TGG | 0.473637 | 6_2:+58757510 | None:intergenic |
| TTGGTCATACTCACTTCTGT+TGG | 0.478544 | 6_2:-58756342 | Msa0921480:CDS |
| TTTGTCATCTGTGAATTATA+AGG | 0.479499 | 6_2:-58760485 | Msa0921480:CDS |
| TAACCAAATGGAAATGATAC+AGG | 0.480184 | 6_2:-58757452 | Msa0921480:CDS |
| CATGAAGATTGATGATTATG+AGG | 0.481207 | 6_2:+58760676 | None:intergenic |
| TGGCCCAATGGACTTTCAAA+TGG | 0.484256 | 6_2:-58757514 | Msa0921480:CDS |
| CCTGGGAACAAAGTGGGAAA+AGG | 0.485105 | 6_2:+58757399 | None:intergenic |
| AGATCTATACATGGTGATAT+GGG | 0.493669 | 6_2:-58756394 | Msa0921480:CDS |
| TCTCCATTTGAAAGTCCATT+GGG | 0.509210 | 6_2:+58757511 | None:intergenic |
| TGCCCTAAATGATAACCAAA+TGG | 0.511234 | 6_2:-58757464 | Msa0921480:CDS |
| TTAGTGTCATTAGGTGTCCT+GGG | 0.514394 | 6_2:+58756044 | None:intergenic |
| TCGCATCCCGTCTTTGGAGA+TGG | 0.521521 | 6_2:-58759217 | Msa0921480:intron |
| TTGATGATTATGAGGCTGTT+GGG | 0.532758 | 6_2:+58760684 | None:intergenic |
| AAGAACTTTGTCCAGAAAAG+AGG | 0.533211 | 6_2:-58756477 | Msa0921480:CDS |
| TGACCTTTGGTGTCGTCGCG+AGG | 0.538385 | 6_2:-58760350 | Msa0921480:CDS |
| ACATAATTGCAGGTATGTAC+AGG | 0.539170 | 6_2:-58756204 | Msa0921480:intron |
| GGAAGAGAAGAATGAATGGA+GGG | 0.543857 | 6_2:-58756157 | Msa0921480:CDS |
| GATGATGTCCTTCTTGTGGC+TGG | 0.544144 | 6_2:-58760463 | Msa0921480:CDS |
| GAGACAAATCCAACGGTTGT+GGG | 0.545127 | 6_2:-58759406 | Msa0921480:CDS |
| CACCAAAGGTCATGATTCCC+AGG | 0.550434 | 6_2:+58760361 | None:intergenic |
| CCTAATGCACCCACAACCGT+TGG | 0.552291 | 6_2:+58759397 | None:intergenic |
| TCTGCAGCTTTAGGGGACAC+TGG | 0.556415 | 6_2:-58760577 | Msa0921480:CDS |
| AGGAAGAGAAGAATGAATGG+AGG | 0.557259 | 6_2:-58756158 | Msa0921480:CDS |
| ATTGATGATTATGAGGCTGT+TGG | 0.557452 | 6_2:+58760683 | None:intergenic |
| CATGCATGTAACTGGCCCAA+TGG | 0.560700 | 6_2:-58757526 | Msa0921480:CDS |
| ATGCTGTTGTAGATGGCATA+AGG | 0.561555 | 6_2:-58756318 | Msa0921480:intron |
| ACATGGTGATATGGGAAGGA+AGG | 0.563356 | 6_2:-58756386 | Msa0921480:CDS |
| GGTTAGCATTGATGGTGGTG+AGG | 0.564432 | 6_2:-58760732 | Msa0921480:exon |
| ACAGAGCTTTGACAAAGAGA+AGG | 0.573023 | 6_2:-58759253 | Msa0921480:intron |
| GCTGCAATTATGGAATGCAA+AGG | 0.579384 | 6_2:-58760630 | Msa0921480:CDS |
| TTGTAAAATCTGGCTACCCA+AGG | 0.582209 | 6_2:+58756014 | None:intergenic |
| TAGTCACCATCTCCAAAGAC+GGG | 0.582917 | 6_2:+58759211 | None:intergenic |
| GAAGAGAAGAATGAATGGAG+GGG | 0.586636 | 6_2:-58756156 | Msa0921480:CDS |
| GCAGCTTTAGGGGACACTGG+TGG | 0.587239 | 6_2:-58760574 | Msa0921480:CDS |
| ATTATTACTCTGTCAATCCC+AGG | 0.588216 | 6_2:-58756061 | Msa0921480:CDS |
| TGATGAGAATTTGAAGTGGG+TGG | 0.589361 | 6_2:-58760512 | Msa0921480:CDS |
| GACCTTTGGTGTCGTCGCGA+GGG | 0.591054 | 6_2:-58760349 | Msa0921480:CDS |
| TTTGTTCTCTTGGTACCATG+AGG | 0.592704 | 6_2:-58759365 | Msa0921480:intron |
| TAAGGATGATGTCCTTCTTG+TGG | 0.593180 | 6_2:-58760467 | Msa0921480:CDS |
| GATCTTATTCGATCTTCAAG+AGG | 0.594801 | 6_2:+58756412 | None:intergenic |
| CAACATCACCAGCCACAAGA+AGG | 0.597011 | 6_2:+58760455 | None:intergenic |
| TAATCACCTGGGAACAAAGT+GGG | 0.597285 | 6_2:+58757393 | None:intergenic |
| CTATACATGGTGATATGGGA+AGG | 0.597645 | 6_2:-58756390 | Msa0921480:CDS |
| ACTGTCTTCTGCAGCTTTAG+GGG | 0.599299 | 6_2:-58760584 | Msa0921480:CDS |
| ATAGTCACCATCTCCAAAGA+CGG | 0.599612 | 6_2:+58759210 | None:intergenic |
| GTCCCTCGCGACGACACCAA+AGG | 0.601344 | 6_2:+58760347 | None:intergenic |
| CCTTAGCTTACCCAAGGGAA+AGG | 0.601574 | 6_2:-58756178 | Msa0921480:CDS |
| ATCTTATTCGATCTTCAAGA+GGG | 0.604887 | 6_2:+58756413 | None:intergenic |
| CATTGGGCCAGTTACATGCA+TGG | 0.607313 | 6_2:+58757527 | None:intergenic |
| AGGCACCCTTAGCTTACCCA+AGG | 0.624931 | 6_2:-58756184 | Msa0921480:CDS |
| TTTATTACTTTAAAATACTG+AGG | 0.625382 | 6_2:-58755935 | Msa0921480:three_prime_UTR |
| TAATAATCAGACCAAAAGCA+AGG | 0.627954 | 6_2:+58756077 | None:intergenic |
| ATCAAAATATAAAGAGAGCG+AGG | 0.643349 | 6_2:+58757486 | None:intergenic |
| TTATGATGAGAATTTGAAGT+GGG | 0.657132 | 6_2:-58760515 | Msa0921480:CDS |
| GGCACCCTTAGCTTACCCAA+GGG | 0.658323 | 6_2:-58756183 | Msa0921480:CDS |
| GATCGAATAAGATCTATACA+TGG | 0.671801 | 6_2:-58756403 | Msa0921480:CDS |
| TGGAGTAGAGACAAATCCAA+CGG | 0.675434 | 6_2:-58759413 | Msa0921480:CDS |
| TTAATCACCTGGGAACAAAG+TGG | 0.679999 | 6_2:+58757392 | None:intergenic |
| ATTATGATGAGAATTTGAAG+TGG | 0.681715 | 6_2:-58760516 | Msa0921480:CDS |
| TCATGGTACCAAGAGAACAA+AGG | 0.703969 | 6_2:+58759367 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTCATTATATTAATAT+TGG | + | chr6_2:58760213-58760232 | None:intergenic | 10.0% |
| !! | TAACAAAACTGTTAATTATT+TGG | - | chr6_2:58758615-58758634 | Msa0921480:intron | 15.0% |
| !! | AATGTAAATCTTAGTATTTA+TGG | - | chr6_2:58758738-58758757 | Msa0921480:intron | 15.0% |
| !!! | TCTCAAAATAATTTTTTAAG+TGG | - | chr6_2:58759191-58759210 | Msa0921480:intron | 15.0% |
| !!! | CTCAAAATAATTTTTTAAGT+GGG | - | chr6_2:58759192-58759211 | Msa0921480:intron | 15.0% |
| !! | GAAAAAAAACAAATATAAGA+AGG | + | chr6_2:58759359-58759378 | None:intergenic | 15.0% |
| !!! | TATATTTGTTTTTTTTCCTT+AGG | - | chr6_2:58759362-58759381 | Msa0921480:intron | 15.0% |
| !!! | TGATTTTTACAAATTATTAG+CGG | - | chr6_2:58760000-58760019 | Msa0921480:intron | 15.0% |
| !!! | TTTATTACTTTAAAATACTG+AGG | - | chr6_2:58760990-58761009 | Msa0921480:five_prime_UTR | 15.0% |
| !!! | TATAAAAATGTGATTTTGAG+AGG | + | chr6_2:58755930-58755949 | None:intergenic | 20.0% |
| !! | TCATTGTTCAATATACAAAA+AGG | - | chr6_2:58755998-58756017 | Msa0921480:CDS | 20.0% |
| !! | AAAACTATGTGAAAGAAAAA+AGG | + | chr6_2:58756026-58756045 | None:intergenic | 20.0% |
| !! | AAGTTAAACAATTTGCAAAA+GGG | + | chr6_2:58756125-58756144 | None:intergenic | 20.0% |
| !! | AGAATATGGACATAATAATA+AGG | + | chr6_2:58756627-58756646 | None:intergenic | 20.0% |
| !! | TTAGATAAACAACTTAACAA+AGG | - | chr6_2:58757151-58757170 | Msa0921480:intron | 20.0% |
| !! | TTTATGCTAATTTCTGTTAT+GGG | - | chr6_2:58757840-58757859 | Msa0921480:intron | 20.0% |
| !!! | TAATCTAGTTCAAAGTTATT+GGG | + | chr6_2:58758155-58758174 | None:intergenic | 20.0% |
| !!! | CTTTTAAAGATCAATCTAAT+TGG | + | chr6_2:58758369-58758388 | None:intergenic | 20.0% |
| !! | TATAAATTTATAGGTCACAA+TGG | - | chr6_2:58758530-58758549 | Msa0921480:intron | 20.0% |
| !! | TAGAACCAATACAATAATAA+GGG | - | chr6_2:58758714-58758733 | Msa0921480:intron | 20.0% |
| !! | ATAATACCATCTTAGAATTT+GGG | + | chr6_2:58759070-58759089 | None:intergenic | 20.0% |
| !! | TATAATACCATCTTAGAATT+TGG | + | chr6_2:58759071-58759090 | None:intergenic | 20.0% |
| !! | ATAACATTATTTATCTCTTG+AGG | + | chr6_2:58760357-58760376 | None:intergenic | 20.0% |
| !!! | TTTAAGCTTTTTATTTGTTC+TGG | - | chr6_2:58760388-58760407 | Msa0921480:CDS | 20.0% |
| !! | GTTTGATGATAATTCGTTAT+GGG | + | chr6_2:58755958-58755977 | None:intergenic | 25.0% |
| !! | AGTTTGATGATAATTCGTTA+TGG | + | chr6_2:58755959-58755978 | None:intergenic | 25.0% |
| ! | TGAAACTTGAAGGAATTTAT+TGG | + | chr6_2:58756080-58756099 | None:intergenic | 25.0% |
| ! | TGTTCAAAATTGAAACTTGA+AGG | + | chr6_2:58756090-58756109 | None:intergenic | 25.0% |
| ! | CAAGTTAAACAATTTGCAAA+AGG | + | chr6_2:58756126-58756145 | None:intergenic | 25.0% |
| !! | CTTTTGCAAATTGTTTAACT+TGG | - | chr6_2:58756124-58756143 | Msa0921480:CDS | 25.0% |
| !! | TCATTGTAGATCAAGATTTT+TGG | - | chr6_2:58756172-58756191 | Msa0921480:CDS | 25.0% |
| ! | ATTATGATGAGAATTTGAAG+TGG | - | chr6_2:58756409-58756428 | Msa0921480:CDS | 25.0% |
| !! | TTATGATGAGAATTTGAAGT+GGG | - | chr6_2:58756410-58756429 | Msa0921480:CDS | 25.0% |
| ! | TTTGTCATCTGTGAATTATA+AGG | - | chr6_2:58756440-58756459 | Msa0921480:CDS | 25.0% |
| ! | ATCTACATAATGCAAGAATA+TGG | + | chr6_2:58756641-58756660 | None:intergenic | 25.0% |
| !! | AAGTATTGCAACAAAGTTTA+CGG | + | chr6_2:58757406-58757425 | None:intergenic | 25.0% |
| !!! | GAAACACTTTTGAAAGATTA+AGG | + | chr6_2:58757615-58757634 | None:intergenic | 25.0% |
| !!! | TCTTTCAAAAGTGTTTCTTT+AGG | - | chr6_2:58757618-58757637 | Msa0921480:intron | 25.0% |
| !!! | CTTTCAAAAGTGTTTCTTTA+GGG | - | chr6_2:58757619-58757638 | Msa0921480:intron | 25.0% |
| !!! | TTTCAAAAGTGTTTCTTTAG+GGG | - | chr6_2:58757620-58757639 | Msa0921480:intron | 25.0% |
| ! | CTTTATGCTAATTTCTGTTA+TGG | - | chr6_2:58757839-58757858 | Msa0921480:intron | 25.0% |
| ! | TTACTGTGTGTTAACAATAT+AGG | - | chr6_2:58757993-58758012 | Msa0921480:intron | 25.0% |
| ! | AAATATACAGTAAAACCGAA+TGG | - | chr6_2:58758085-58758104 | Msa0921480:intron | 25.0% |
| !! | TACTAGCTTAGAAACTTAAA+GGG | - | chr6_2:58758115-58758134 | Msa0921480:intron | 25.0% |
| !! | CTAATCTAGTTCAAAGTTAT+TGG | + | chr6_2:58758156-58758175 | None:intergenic | 25.0% |
| ! | TCCTTATAAGAATTCGATTT+AGG | - | chr6_2:58758276-58758295 | Msa0921480:intron | 25.0% |
| ! | ATTTAGGCTCAAAAGTTATT+CGG | - | chr6_2:58758292-58758311 | Msa0921480:intron | 25.0% |
| !! | AGATTGATCTTTAAAAGTGT+CGG | - | chr6_2:58758372-58758391 | Msa0921480:intron | 25.0% |
| ! | GAGATAGATCAAGAAATTAA+TGG | - | chr6_2:58758413-58758432 | Msa0921480:intron | 25.0% |
| ! | TATTCATTCTCTCAGATTTA+GGG | + | chr6_2:58758479-58758498 | None:intergenic | 25.0% |
| ! | ATATTCATTCTCTCAGATTT+AGG | + | chr6_2:58758480-58758499 | None:intergenic | 25.0% |
| !! | TTTTGTTAACAGTTACTACT+GGG | + | chr6_2:58758603-58758622 | None:intergenic | 25.0% |
| ! | GTATAGACTTATAACAAGAT+TGG | + | chr6_2:58758687-58758706 | None:intergenic | 25.0% |
| ! | TGTTATAAGTCTATACCTAT+TGG | - | chr6_2:58758691-58758710 | Msa0921480:intron | 25.0% |
| ! | GTAGAACCAATACAATAATA+AGG | - | chr6_2:58758713-58758732 | Msa0921480:intron | 25.0% |
| ! | CATTACCCTTATTATTGTAT+TGG | + | chr6_2:58758722-58758741 | None:intergenic | 25.0% |
| ! | ATAAAACTTAGAATTTGGGT+CGG | + | chr6_2:58758878-58758897 | None:intergenic | 25.0% |
| !!! | ACCCAAATTCTAAGTTTTAT+TGG | - | chr6_2:58758878-58758897 | Msa0921480:intron | 25.0% |
| ! | CCCAATAAAACTTAGAATTT+GGG | + | chr6_2:58758882-58758901 | None:intergenic | 25.0% |
| !!! | CCCAAATTCTAAGTTTTATT+GGG | - | chr6_2:58758879-58758898 | Msa0921480:intron | 25.0% |
| ! | CTGAAAATGAGTTTATAAGT+GGG | - | chr6_2:58758994-58759013 | Msa0921480:intron | 25.0% |
| ! | CATGAGAATTAGTAGAATTT+GGG | + | chr6_2:58759268-58759287 | None:intergenic | 25.0% |
| ! | ACATGAGAATTAGTAGAATT+TGG | + | chr6_2:58759269-58759288 | None:intergenic | 25.0% |
| ! | GGAAAATAAACAAATACCAT+AGG | + | chr6_2:58759338-58759357 | None:intergenic | 25.0% |
| ! | TTCCATTTGGTTATCATTTA+GGG | + | chr6_2:58759466-58759485 | None:intergenic | 25.0% |
| ! | TTTCCATTTGGTTATCATTT+AGG | + | chr6_2:58759467-58759486 | None:intergenic | 25.0% |
| ! | ACTTAACCACATAAAATTGT+TGG | - | chr6_2:58759599-58759618 | Msa0921480:intron | 25.0% |
| !! | TACTTTCCAACAATTTTATG+TGG | + | chr6_2:58759608-58759627 | None:intergenic | 25.0% |
| !! | ATATGTTTTCTTCAATGCAA+TGG | - | chr6_2:58759646-58759665 | Msa0921480:intron | 25.0% |
| ! | AAATTGTATATGGTCATGTT+TGG | - | chr6_2:58759710-58759729 | Msa0921480:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+TGG | + | chr6_2:58759975-58759994 | None:intergenic | 25.0% |
| ! | ATTTATCAGAGTTTATCCAT+TGG | + | chr6_2:58760158-58760177 | None:intergenic | 25.0% |
| !!! | AATGCATTTTAGTGTTTATG+AGG | + | chr6_2:58760301-58760320 | None:intergenic | 25.0% |
| !!! | CTTTTTATTTGTTCTGGTTA+TGG | - | chr6_2:58760394-58760413 | Msa0921480:CDS | 25.0% |
| ! | AATCATAACTTCAGTACTTT+AGG | + | chr6_2:58760661-58760680 | None:intergenic | 25.0% |
| ! | ATACAACAAATGGTACATAA+AGG | + | chr6_2:58760686-58760705 | None:intergenic | 25.0% |
| ! | ACATTTAGCAATACAACAAA+TGG | + | chr6_2:58760696-58760715 | None:intergenic | 25.0% |
| !!! | TTGCTTTTTCTTGTAAAATC+TGG | + | chr6_2:58760924-58760943 | None:intergenic | 25.0% |
| !!! | AGATTTTTGGTTAGCATTGA+TGG | - | chr6_2:58756185-58756204 | Msa0921480:CDS | 30.0% |
| ! | CATGAAGATTGATGATTATG+AGG | + | chr6_2:58756252-58756271 | None:intergenic | 30.0% |
| ! | AACATGTTTTCTATGTTCCT+GGG | - | chr6_2:58756547-58756566 | Msa0921480:intron | 30.0% |
| ! | TTGACACAAACATAGCTTTT+AGG | - | chr6_2:58756664-58756683 | Msa0921480:intron | 30.0% |
| ! | AAAGTCCCGTGTTTAAAATT+TGG | - | chr6_2:58756759-58756778 | Msa0921480:intron | 30.0% |
| ! | GTCATCCAAATTTTAAACAC+GGG | + | chr6_2:58756767-58756786 | None:intergenic | 30.0% |
| ! | CGTCATCCAAATTTTAAACA+CGG | + | chr6_2:58756768-58756787 | None:intergenic | 30.0% |
| ! | CGTGTTTAAAATTTGGATGA+CGG | - | chr6_2:58756766-58756785 | Msa0921480:intron | 30.0% |
| CGAAGAATTGCAGTAAAATT+CGG | + | chr6_2:58756851-58756870 | None:intergenic | 30.0% | |
| !!! | AAGGTTTTAAATTGCGGTAA+TGG | + | chr6_2:58756903-58756922 | None:intergenic | 30.0% |
| !!! | TGACGAAAGGTTTTAAATTG+CGG | + | chr6_2:58756909-58756928 | None:intergenic | 30.0% |
| ATTTGATGAAAATACTCCAG+AGG | + | chr6_2:58756990-58757009 | None:intergenic | 30.0% | |
| TTAATTCCGTGAACGTATTT+AGG | - | chr6_2:58757044-58757063 | Msa0921480:intron | 30.0% | |
| AATAGACCTAAATACGTTCA+CGG | + | chr6_2:58757053-58757072 | None:intergenic | 30.0% | |
| ! | TTACATTGTACCCTGATTTT+CGG | - | chr6_2:58757084-58757103 | Msa0921480:intron | 30.0% |
| !! | TTGGGTTTGATTTAAGTTGA+AGG | - | chr6_2:58757107-58757126 | Msa0921480:intron | 30.0% |
| !! | TGGGTTTGATTTAAGTTGAA+GGG | - | chr6_2:58757108-58757127 | Msa0921480:intron | 30.0% |
| AGTTATTTAAGCTTATCCAG+TGG | + | chr6_2:58757305-58757324 | None:intergenic | 30.0% | |
| AGTATTGCAACAAAGTTTAC+GGG | + | chr6_2:58757405-58757424 | None:intergenic | 30.0% | |
| !!! | ATCAATCGACGTTTTTTGAA+TGG | + | chr6_2:58757761-58757780 | None:intergenic | 30.0% |
| ! | ATTCAAAAAACGTCGATTGA+TGG | - | chr6_2:58757760-58757779 | Msa0921480:intron | 30.0% |
| !!! | TGTGTGTGCATTTTAACTTT+CGG | - | chr6_2:58757870-58757889 | Msa0921480:intron | 30.0% |
| ! | CAACAGTAAGCAACATTTTT+AGG | + | chr6_2:58757939-58757958 | None:intergenic | 30.0% |
| TTTCAGACAGAATAACAAAC+AGG | - | chr6_2:58758017-58758036 | Msa0921480:intron | 30.0% | |
| TCAATGGCATTACATAATAG+AGG | - | chr6_2:58758054-58758073 | Msa0921480:intron | 30.0% | |
| ! | CTACTAGCTTAGAAACTTAA+AGG | - | chr6_2:58758114-58758133 | Msa0921480:intron | 30.0% |
| ! | AAAGCTTGAGTTGTTAACTT+AGG | + | chr6_2:58758211-58758230 | None:intergenic | 30.0% |
| GCCTAAATCGAATTCTTATA+AGG | + | chr6_2:58758280-58758299 | None:intergenic | 30.0% | |
| ! | ATCTAATTGGCAGCATTTTA+TGG | + | chr6_2:58758356-58758375 | None:intergenic | 30.0% |
| AGAGAATGAATATGATGCAA+TGG | - | chr6_2:58758487-58758506 | Msa0921480:intron | 30.0% | |
| ATGTAAGTTAAGTGTTTGAC+AGG | - | chr6_2:58758558-58758577 | Msa0921480:intron | 30.0% | |
| !! | GTTTTGTTAACAGTTACTAC+TGG | + | chr6_2:58758604-58758623 | None:intergenic | 30.0% |
| !! | ATTGTATTGGTTCTACCAAT+AGG | + | chr6_2:58758709-58758728 | None:intergenic | 30.0% |
| CATATCTCATACAATATGGT+GGG | + | chr6_2:58758790-58758809 | None:intergenic | 30.0% | |
| AGACCATATCTCATACAATA+TGG | + | chr6_2:58758794-58758813 | None:intergenic | 30.0% | |
| GCCCAATAAAACTTAGAATT+TGG | + | chr6_2:58758883-58758902 | None:intergenic | 30.0% | |
| ! | CCACTTATAAACTCATTTTC+AGG | + | chr6_2:58758996-58759015 | None:intergenic | 30.0% |
| CCTGAAAATGAGTTTATAAG+TGG | - | chr6_2:58758993-58759012 | Msa0921480:intron | 30.0% | |
| AAACAAATACCATAGGTGTT+AGG | + | chr6_2:58759331-58759350 | None:intergenic | 30.0% | |
| ATCAAAATATAAAGAGAGCG+AGG | + | chr6_2:58759442-58759461 | None:intergenic | 30.0% | |
| TAACCAAATGGAAATGATAC+AGG | - | chr6_2:58759473-58759492 | Msa0921480:intron | 30.0% | |
| TTTCTTCAATGCAATGGTAA+TGG | - | chr6_2:58759652-58759671 | Msa0921480:intron | 30.0% | |
| TCCTAATTTCTAAATGAGTG+AGG | - | chr6_2:58759678-58759697 | Msa0921480:intron | 30.0% | |
| AACAATGCTTACAGCATAAA+CGG | - | chr6_2:58759736-58759755 | Msa0921480:intron | 30.0% | |
| ! | TAAGTTTTCGTAAGCTATCA+TGG | - | chr6_2:58759853-58759872 | Msa0921480:intron | 30.0% |
| TTACAAATTATTAGCGGTGT+CGG | - | chr6_2:58760006-58760025 | Msa0921480:intron | 30.0% | |
| ! | CTATATATTTTTCCAGCCTA+TGG | + | chr6_2:58760074-58760093 | None:intergenic | 30.0% |
| ATAATGAAAACTGACCTGTA+CGG | - | chr6_2:58760221-58760240 | Msa0921480:intron | 30.0% | |
| CATATGATTGTATGAGGAAA+AGG | - | chr6_2:58760244-58760263 | Msa0921480:intron | 30.0% | |
| AGGTGTATAAAATCCAACAT+TGG | - | chr6_2:58760264-58760283 | Msa0921480:intron | 30.0% | |
| GGAGTTATTTATTCCAATGT+TGG | + | chr6_2:58760280-58760299 | None:intergenic | 30.0% | |
| !!! | TATTCAATGACCGTTTTTTG+TGG | - | chr6_2:58760323-58760342 | Msa0921480:intron | 30.0% |
| ! | TAGAATAACATCCTCTTTTC+TGG | + | chr6_2:58760462-58760481 | None:intergenic | 30.0% |
| !! | GGTCTGAACCAATTATTTTT+GGG | + | chr6_2:58760494-58760513 | None:intergenic | 30.0% |
| ATCTTATTCGATCTTCAAGA+GGG | + | chr6_2:58760515-58760534 | None:intergenic | 30.0% | |
| GATCGAATAAGATCTATACA+TGG | - | chr6_2:58760522-58760541 | Msa0921480:CDS | 30.0% | |
| AAGATCTATACATGGTGATA+TGG | - | chr6_2:58760530-58760549 | Msa0921480:CDS | 30.0% | |
| AGATCTATACATGGTGATAT+GGG | - | chr6_2:58760531-58760550 | Msa0921480:CDS | 30.0% | |
| GTACTTTAGGTATGAAAGTT+TGG | + | chr6_2:58760648-58760667 | None:intergenic | 30.0% | |
| AATGTAGTTGACATAATTGC+AGG | - | chr6_2:58760711-58760730 | Msa0921480:CDS | 30.0% | |
| TTGTCAGCATAAAGACAAAA+TGG | + | chr6_2:58760806-58760825 | None:intergenic | 30.0% | |
| ! | ATAAACTCAATCCTTGCTTT+TGG | - | chr6_2:58760837-58760856 | Msa0921480:intron | 30.0% |
| TAATAATCAGACCAAAAGCA+AGG | + | chr6_2:58760851-58760870 | None:intergenic | 30.0% | |
| !!! | TTTTTGGTTAGCATTGATGG+TGG | - | chr6_2:58756188-58756207 | Msa0921480:CDS | 35.0% |
| ! | TTGATGATTATGAGGCTGTT+GGG | + | chr6_2:58756244-58756263 | None:intergenic | 35.0% |
| ! | ATTGATGATTATGAGGCTGT+TGG | + | chr6_2:58756245-58756264 | None:intergenic | 35.0% |
| TTGACTGTTAGCTGCAATTA+TGG | - | chr6_2:58756285-58756304 | Msa0921480:intron | 35.0% | |
| GGAATGCAAAGGTTTAATCT+TGG | - | chr6_2:58756306-58756325 | Msa0921480:intron | 35.0% | |
| ! | GAACATGTTTTCTATGTTCC+TGG | - | chr6_2:58756546-58756565 | Msa0921480:intron | 35.0% |
| TAGTCAAATACTCCGACATT+CGG | + | chr6_2:58756721-58756740 | None:intergenic | 35.0% | |
| GAGTATTTGACTATTGTCCA+AGG | - | chr6_2:58756728-58756747 | Msa0921480:intron | 35.0% | |
| ! | CGGGACTTTATTTAAAACCT+TGG | + | chr6_2:58756748-58756767 | None:intergenic | 35.0% |
| ATATCTCCACAATCACAAAG+TGG | - | chr6_2:58756804-58756823 | Msa0921480:intron | 35.0% | |
| ! | CAAGTATCGTAACATGAACA+AGG | - | chr6_2:58756877-58756896 | Msa0921480:intron | 35.0% |
| AATAGACACTTCAATCTTCG+AGG | + | chr6_2:58756960-58756979 | None:intergenic | 35.0% | |
| ! | GCTGATTTCATAAGCTATCA+TGG | - | chr6_2:58757199-58757218 | Msa0921480:intron | 35.0% |
| !! | ACTTTTCAAGAGAATCAACC+TGG | + | chr6_2:58757461-58757480 | None:intergenic | 35.0% |
| CTTGATGCATGTAAGAGAAT+TGG | - | chr6_2:58757492-58757511 | Msa0921480:CDS | 35.0% | |
| GAATCATTCCTTTGTTCTCT+TGG | - | chr6_2:58757550-58757569 | Msa0921480:intron | 35.0% | |
| !!! | CGTTTTTTGAATGGCTTACT+AGG | + | chr6_2:58757752-58757771 | None:intergenic | 35.0% |
| AGTCTTTAATCAAGCACCAT+GGG | + | chr6_2:58757806-58757825 | None:intergenic | 35.0% | |
| TAGTCTTTAATCAAGCACCA+TGG | + | chr6_2:58757807-58757826 | None:intergenic | 35.0% | |
| !!! | GTGTGTGCATTTTAACTTTC+GGG | - | chr6_2:58757871-58757890 | Msa0921480:intron | 35.0% |
| !!! | TGTGTGCATTTTAACTTTCG+GGG | - | chr6_2:58757872-58757891 | Msa0921480:intron | 35.0% |
| TAGAAACTTAAAGGGCCAAA+TGG | - | chr6_2:58758123-58758142 | Msa0921480:intron | 35.0% | |
| TTCAATCACATGTCAAGTCA+AGG | + | chr6_2:58758247-58758266 | None:intergenic | 35.0% | |
| GAAATTAGCAGTGTATTGCA+GGG | + | chr6_2:58758322-58758341 | None:intergenic | 35.0% | |
| AGAAATTAGCAGTGTATTGC+AGG | + | chr6_2:58758323-58758342 | None:intergenic | 35.0% | |
| CCATATCTCATACAATATGG+TGG | + | chr6_2:58758791-58758810 | None:intergenic | 35.0% | |
| CCACCATATTGTATGAGATA+TGG | - | chr6_2:58758788-58758807 | Msa0921480:intron | 35.0% | |
| TATGGTCTGAAGATGAGTTT+AGG | - | chr6_2:58758806-58758825 | Msa0921480:intron | 35.0% | |
| CAAACTTAACCCTACAAAAC+CGG | + | chr6_2:58758853-58758872 | None:intergenic | 35.0% | |
| !! | ACCTTATAAGTCGGTTTTGT+GGG | - | chr6_2:58759028-58759047 | Msa0921480:intron | 35.0% |
| ! | ACCATCTTAGAATTTGGGTT+AGG | + | chr6_2:58759065-58759084 | None:intergenic | 35.0% |
| TAGTCTATCCAAGATCTACT+AGG | - | chr6_2:58759089-58759108 | Msa0921480:intron | 35.0% | |
| GACTATATCTCATCCAATGT+GGG | + | chr6_2:58759173-58759192 | None:intergenic | 35.0% | |
| AGACTATATCTCATCCAATG+TGG | + | chr6_2:58759174-58759193 | None:intergenic | 35.0% | |
| AACTTCTTTCCTAACACCTA+TGG | - | chr6_2:58759319-58759338 | Msa0921480:intron | 35.0% | |
| !!! | TTTTTTTCCTTAGGCGTGTA+AGG | - | chr6_2:58759371-58759390 | Msa0921480:CDS | 35.0% |
| TCTCCATTTGAAAGTCCATT+GGG | + | chr6_2:58759417-58759436 | None:intergenic | 35.0% | |
| ATCTCCATTTGAAAGTCCAT+TGG | + | chr6_2:58759418-58759437 | None:intergenic | 35.0% | |
| TGCCCTAAATGATAACCAAA+TGG | - | chr6_2:58759461-58759480 | Msa0921480:CDS | 35.0% | |
| TCTCCTGTATCATTTCCATT+TGG | + | chr6_2:58759479-58759498 | None:intergenic | 35.0% | |
| !!! | GCTATTTTTTCAGTTCCAGT+TGG | - | chr6_2:58759574-58759593 | Msa0921480:intron | 35.0% |
| TATGTGGTTAAGTAACCAAC+TGG | + | chr6_2:58759592-58759611 | None:intergenic | 35.0% | |
| !! | AAAGTACAGTGTTGATTGCT+TGG | - | chr6_2:58759622-58759641 | Msa0921480:intron | 35.0% |
| GCCTCACTCATTTAGAAATT+AGG | + | chr6_2:58759682-58759701 | None:intergenic | 35.0% | |
| AAGCTGAAAACTATGAAGCA+CGG | - | chr6_2:58759891-58759910 | Msa0921480:intron | 35.0% | |
| AAGAACTTTGTCCAGAAAAG+AGG | - | chr6_2:58760448-58760467 | Msa0921480:CDS | 35.0% | |
| !!! | CCAATTATTTTTGGGAGCTT+GGG | + | chr6_2:58760486-58760505 | None:intergenic | 35.0% |
| !!! | ACCAATTATTTTTGGGAGCT+TGG | + | chr6_2:58760487-58760506 | None:intergenic | 35.0% |
| ! | GGGTCTGAACCAATTATTTT+TGG | + | chr6_2:58760495-58760514 | None:intergenic | 35.0% |
| GATCTTATTCGATCTTCAAG+AGG | + | chr6_2:58760516-58760535 | None:intergenic | 35.0% | |
| ACATAATTGCAGGTATGTAC+AGG | - | chr6_2:58760721-58760740 | Msa0921480:CDS | 35.0% | |
| GAAAGGAAGAGAAGAATGAA+TGG | - | chr6_2:58760764-58760783 | Msa0921480:intron | 35.0% | |
| ATTATTACTCTGTCAATCCC+AGG | - | chr6_2:58760864-58760883 | Msa0921480:intron | 35.0% | |
| GGGACAGTGTTAGAGAAAAA+GGG | + | chr6_2:58756224-58756243 | None:intergenic | 40.0% | |
| TGGGACAGTGTTAGAGAAAA+AGG | + | chr6_2:58756225-58756244 | None:intergenic | 40.0% | |
| GCTGCAATTATGGAATGCAA+AGG | - | chr6_2:58756295-58756314 | Msa0921480:intron | 40.0% | |
| ATACTGTCTTCTGCAGCTTT+AGG | - | chr6_2:58756339-58756358 | Msa0921480:CDS | 40.0% | |
| TACTGTCTTCTGCAGCTTTA+GGG | - | chr6_2:58756340-58756359 | Msa0921480:CDS | 40.0% | |
| ! | TGATGAGAATTTGAAGTGGG+TGG | - | chr6_2:58756413-58756432 | Msa0921480:CDS | 40.0% |
| TAAGGATGATGTCCTTCTTG+TGG | - | chr6_2:58756458-58756477 | Msa0921480:CDS | 40.0% | |
| GCGAGGGACAAAATTATGTA+AGG | - | chr6_2:58756592-58756611 | Msa0921480:intron | 40.0% | |
| GACATTCGGGACTAAATTGA+GGG | + | chr6_2:58756707-58756726 | None:intergenic | 40.0% | |
| CTCAATTTAGTCCCGAATGT+CGG | - | chr6_2:58756706-58756725 | Msa0921480:intron | 40.0% | |
| AGTCAAATACTCCGACATTC+GGG | + | chr6_2:58756720-58756739 | None:intergenic | 40.0% | |
| ! | AAATTTGGATGACGGCATCA+AGG | - | chr6_2:58756774-58756793 | Msa0921480:intron | 40.0% |
| TCACAAAGTGGCTGTGATTA+AGG | - | chr6_2:58756816-58756835 | Msa0921480:intron | 40.0% | |
| AACAAGACTACTGTGACGAA+AGG | + | chr6_2:58756922-58756941 | None:intergenic | 40.0% | |
| CAATCTTCGAGGAACTCTAA+TGG | + | chr6_2:58756949-58756968 | None:intergenic | 40.0% | |
| GTGTCTATTGTTTAGTCCTC+TGG | - | chr6_2:58756971-58756990 | Msa0921480:intron | 40.0% | |
| ! | ATTGTACCCTGATTTTCGGT+TGG | - | chr6_2:58757088-58757107 | Msa0921480:intron | 40.0% |
| ! | TTGTACCCTGATTTTCGGTT+GGG | - | chr6_2:58757089-58757108 | Msa0921480:intron | 40.0% |
| TCAAACCCAACCGAAAATCA+GGG | + | chr6_2:58757097-58757116 | None:intergenic | 40.0% | |
| ATCAAACCCAACCGAAAATC+AGG | + | chr6_2:58757098-58757117 | None:intergenic | 40.0% | |
| GTTGAAGGGATAGATAGCTT+AGG | - | chr6_2:58757122-58757141 | Msa0921480:intron | 40.0% | |
| AAACACTTTCGAGACTGTCT+AGG | + | chr6_2:58757279-58757298 | None:intergenic | 40.0% | |
| !!! | GCTTTTGCTGATTTTTCTCC+AGG | - | chr6_2:58757440-58757459 | Msa0921480:CDS | 40.0% |
| TGGAGTAGAGACAAATCCAA+CGG | - | chr6_2:58757512-58757531 | Msa0921480:CDS | 40.0% | |
| TCATGGTACCAAGAGAACAA+AGG | + | chr6_2:58757561-58757580 | None:intergenic | 40.0% | |
| TTTGTTCTCTTGGTACCATG+AGG | - | chr6_2:58757560-58757579 | Msa0921480:intron | 40.0% | |
| CTACAGAAGTAATCACCTCA+TGG | + | chr6_2:58757578-58757597 | None:intergenic | 40.0% | |
| GGTGATTACTTCTGTAGTGT+CGG | - | chr6_2:58757581-58757600 | Msa0921480:intron | 40.0% | |
| ! | ACAGAGCTTTGACAAAGAGA+AGG | - | chr6_2:58757672-58757691 | Msa0921480:intron | 40.0% |
| GACAAAGAGAAGGACATAAC+AGG | - | chr6_2:58757682-58757701 | Msa0921480:intron | 40.0% | |
| ATAGTCACCATCTCCAAAGA+CGG | + | chr6_2:58757718-58757737 | None:intergenic | 40.0% | |
| ATCATGCGCTTAATTTCCCA+TGG | - | chr6_2:58757787-58757806 | Msa0921480:intron | 40.0% | |
| AGAATAACAAACAGGCAGCT+AGG | - | chr6_2:58758025-58758044 | Msa0921480:intron | 40.0% | |
| GAATAACAAACAGGCAGCTA+GGG | - | chr6_2:58758026-58758045 | Msa0921480:intron | 40.0% | |
| AGCTAGTAGTCTAGTCCATT+CGG | + | chr6_2:58758103-58758122 | None:intergenic | 40.0% | |
| AGATTTAGGGAAAGAGACAC+TGG | + | chr6_2:58758466-58758485 | None:intergenic | 40.0% | |
| !! | AAAACCGGCTTGTAAGATGA+GGG | + | chr6_2:58758838-58758857 | None:intergenic | 40.0% |
| !! | ATCTTACAAGCCGGTTTTGT+AGG | - | chr6_2:58758840-58758859 | Msa0921480:intron | 40.0% |
| !! | TCTTACAAGCCGGTTTTGTA+GGG | - | chr6_2:58758841-58758860 | Msa0921480:intron | 40.0% |
| !! | CGGTTTTGTAGGGTTAAGTT+TGG | - | chr6_2:58758851-58758870 | Msa0921480:intron | 40.0% |
| ACATCCATCACACCTAAAAC+TGG | + | chr6_2:58758943-58758962 | None:intergenic | 40.0% | |
| ATGTGTTAAGAGTCCCACAT+TGG | - | chr6_2:58758959-58758978 | Msa0921480:intron | 40.0% | |
| TAAGAGTCCCACATTGGATT+AGG | - | chr6_2:58758965-58758984 | Msa0921480:intron | 40.0% | |
| AAGAGTCCCACATTGGATTA+GGG | - | chr6_2:58758966-58758985 | Msa0921480:intron | 40.0% | |
| GCCTATCTCACCTTATAAGT+CGG | - | chr6_2:58759019-58759038 | Msa0921480:intron | 40.0% | |
| ! | ACCGACTTATAAGGTGAGAT+AGG | + | chr6_2:58759023-58759042 | None:intergenic | 40.0% |
| !! | CACCTTATAAGTCGGTTTTG+TGG | - | chr6_2:58759027-58759046 | Msa0921480:intron | 40.0% |
| !! | CCTTATAAGTCGGTTTTGTG+GGG | - | chr6_2:58759029-58759048 | Msa0921480:intron | 40.0% |
| ! | GCCTAACCCAAATTCTAAGA+TGG | - | chr6_2:58759061-58759080 | Msa0921480:intron | 40.0% |
| GTGTGTTAAGAATCCCACAT+TGG | - | chr6_2:58759157-58759176 | Msa0921480:intron | 40.0% | |
| AAATCGTTCACCTTACAAGC+CGG | - | chr6_2:58759217-58759236 | Msa0921480:intron | 40.0% | |
| CTAGCTCAACCAAACAAAAC+CGG | + | chr6_2:58759239-58759258 | None:intergenic | 40.0% | |
| TAATCACCTGGGAACAAAGT+GGG | + | chr6_2:58759535-58759554 | None:intergenic | 40.0% | |
| TTAATCACCTGGGAACAAAG+TGG | + | chr6_2:58759536-58759555 | None:intergenic | 40.0% | |
| GTACGACAGATTAATCACCT+GGG | + | chr6_2:58759546-58759565 | None:intergenic | 40.0% | |
| GCTCAGTGCGAAATTGTATA+TGG | - | chr6_2:58759700-58759719 | Msa0921480:intron | 40.0% | |
| ATCACAAGTGTTTGTGCCAA+TGG | - | chr6_2:58760139-58760158 | Msa0921480:intron | 40.0% | |
| TCAATCCAAACGAGCTTCTA+TGG | - | chr6_2:58760177-58760196 | Msa0921480:intron | 40.0% | |
| ATAAGCCATAGAAGCTCGTT+TGG | + | chr6_2:58760185-58760204 | None:intergenic | 40.0% | |
| AAACGAGCTTCTATGGCTTA+TGG | - | chr6_2:58760184-58760203 | Msa0921480:intron | 40.0% | |
| CATACAATCATATGCCGTAC+AGG | + | chr6_2:58760238-58760257 | None:intergenic | 40.0% | |
| GTACGGCATATGATTGTATG+AGG | - | chr6_2:58760238-58760257 | Msa0921480:intron | 40.0% | |
| GGCAACACAACCACAAAAAA+CGG | + | chr6_2:58760336-58760355 | None:intergenic | 40.0% | |
| ATGTTAGCATGCTTCTTCAC+AGG | - | chr6_2:58760424-58760443 | Msa0921480:CDS | 40.0% | |
| CCCAAGCTCCCAAAAATAAT+TGG | - | chr6_2:58760483-58760502 | Msa0921480:CDS | 40.0% | |
| CTATACATGGTGATATGGGA+AGG | - | chr6_2:58760535-58760554 | Msa0921480:CDS | 40.0% | |
| GCATCTTCTTGTCATGTGTT+TGG | - | chr6_2:58760564-58760583 | Msa0921480:CDS | 40.0% | |
| TTGGTCATACTCACTTCTGT+TGG | - | chr6_2:58760583-58760602 | Msa0921480:CDS | 40.0% | |
| TGGTCATACTCACTTCTGTT+GGG | - | chr6_2:58760584-58760603 | Msa0921480:CDS | 40.0% | |
| ATGCTGTTGTAGATGGCATA+AGG | - | chr6_2:58760607-58760626 | Msa0921480:CDS | 40.0% | |
| TTCTTCTCTTCCTTTCCCTT+GGG | + | chr6_2:58760760-58760779 | None:intergenic | 40.0% | |
| ATTCTTCTCTTCCTTTCCCT+TGG | + | chr6_2:58760761-58760780 | None:intergenic | 40.0% | |
| AGGAAGAGAAGAATGAATGG+AGG | - | chr6_2:58760767-58760786 | Msa0921480:intron | 40.0% | |
| GGAAGAGAAGAATGAATGGA+GGG | - | chr6_2:58760768-58760787 | Msa0921480:intron | 40.0% | |
| GAAGAGAAGAATGAATGGAG+GGG | - | chr6_2:58760769-58760788 | Msa0921480:intron | 40.0% | |
| GAATGAATGGAGGGGAAAAT+TGG | - | chr6_2:58760777-58760796 | Msa0921480:intron | 40.0% | |
| ! | TTAGTGTCATTAGGTGTCCT+GGG | + | chr6_2:58760884-58760903 | None:intergenic | 40.0% |
| ! | TTTAGTGTCATTAGGTGTCC+TGG | + | chr6_2:58760885-58760904 | None:intergenic | 40.0% |
| ! | GGAGCAAGTTTAGTGTCATT+AGG | + | chr6_2:58760893-58760912 | None:intergenic | 40.0% |
| ! | ATGACACTAAACTTGCTCCT+TGG | - | chr6_2:58760894-58760913 | Msa0921480:intron | 40.0% |
| ! | TGACACTAAACTTGCTCCTT+GGG | - | chr6_2:58760895-58760914 | Msa0921480:intron | 40.0% |
| TTGTAAAATCTGGCTACCCA+AGG | + | chr6_2:58760914-58760933 | None:intergenic | 40.0% | |
| ! | ACTGTCTTCTGCAGCTTTAG+GGG | - | chr6_2:58756341-58756360 | Msa0921480:CDS | 45.0% |
| TTCCTGGGAATCATGACCTT+TGG | - | chr6_2:58756562-58756581 | Msa0921480:intron | 45.0% | |
| CGACATTCGGGACTAAATTG+AGG | + | chr6_2:58756708-58756727 | None:intergenic | 45.0% | |
| ! | TCACAGCCACTTTGTGATTG+TGG | + | chr6_2:58756813-58756832 | None:intergenic | 45.0% |
| !! | CTCGAAAGTGTTTATGCCAC+TGG | - | chr6_2:58757286-58757305 | Msa0921480:intron | 45.0% |
| ! | ACGTGCACTAAAGGCTTGTT+TGG | + | chr6_2:58757332-58757351 | None:intergenic | 45.0% |
| GCAATACAGACGTGCACTAA+AGG | + | chr6_2:58757341-58757360 | None:intergenic | 45.0% | |
| AACGAGGAAAGCAGTAAGTC+TGG | + | chr6_2:58757382-58757401 | None:intergenic | 45.0% | |
| CAACAAAGTTTACGGGAACG+AGG | + | chr6_2:58757398-58757417 | None:intergenic | 45.0% | |
| AGAGACAAATCCAACGGTTG+TGG | - | chr6_2:58757518-58757537 | Msa0921480:CDS | 45.0% | |
| GAGACAAATCCAACGGTTGT+GGG | - | chr6_2:58757519-58757538 | Msa0921480:CDS | 45.0% | |
| TAGTCACCATCTCCAAAGAC+GGG | + | chr6_2:58757717-58757736 | None:intergenic | 45.0% | |
| GAAAATGCCATGCTTTGTGC+TGG | - | chr6_2:58757962-58757981 | Msa0921480:intron | 45.0% | |
| !! | GGCAGCTAGGGTTTTATCAA+TGG | - | chr6_2:58758038-58758057 | Msa0921480:intron | 45.0% |
| CTTAAAGGGCCAAATGGCAT+AGG | - | chr6_2:58758129-58758148 | Msa0921480:intron | 45.0% | |
| GTTATTGGGCCTATGCCATT+TGG | + | chr6_2:58758141-58758160 | None:intergenic | 45.0% | |
| ACATCCCTCATCTTACAAGC+CGG | - | chr6_2:58758831-58758850 | Msa0921480:intron | 45.0% | |
| !! | CAAAACCGGCTTGTAAGATG+AGG | + | chr6_2:58758839-58758858 | None:intergenic | 45.0% |
| TTTATTGGGCCACCCGTTAT+CGG | - | chr6_2:58758893-58758912 | Msa0921480:intron | 45.0% | |
| TCACACCTAAAACTGGACTC+TGG | + | chr6_2:58758936-58758955 | None:intergenic | 45.0% | |
| !!! | GAGTCCAGTTTTAGGTGTGA+TGG | - | chr6_2:58758936-58758955 | Msa0921480:intron | 45.0% |
| ! | CCCCACAAAACCGACTTATA+AGG | + | chr6_2:58759032-58759051 | None:intergenic | 45.0% |
| !! | CCAAACAAAACCGGCTTGTA+AGG | + | chr6_2:58759230-58759249 | None:intergenic | 45.0% |
| !!! | CCTTACAAGCCGGTTTTGTT+TGG | - | chr6_2:58759227-58759246 | Msa0921480:CDS | 45.0% |
| !!! | CGGTTTTGTTTGGTTGAGCT+AGG | - | chr6_2:58759237-58759256 | Msa0921480:CDS | 45.0% |
| AGGACTTCCATGCATGTAAC+TGG | - | chr6_2:58759391-58759410 | Msa0921480:CDS | 45.0% | |
| ! | TGGCCCAATGGACTTTCAAA+TGG | - | chr6_2:58759411-58759430 | Msa0921480:CDS | 45.0% |
| CGTACGACAGATTAATCACC+TGG | + | chr6_2:58759547-58759566 | None:intergenic | 45.0% | |
| TATGAAGCACGGACACTTCT+CGG | - | chr6_2:58759902-58759921 | Msa0921480:intron | 45.0% | |
| GATTAGGCGTGTCTTGGTAT+TGG | - | chr6_2:58759924-58759943 | Msa0921480:intron | 45.0% | |
| ! | TTTTTCCAGCCTATGGAGCA+AGG | + | chr6_2:58760067-58760086 | None:intergenic | 45.0% |
| ACATGGTGATATGGGAAGGA+AGG | - | chr6_2:58760539-58760558 | Msa0921480:CDS | 45.0% | |
| TGTTGGGATGCTGTTGTAGA+TGG | - | chr6_2:58760600-58760619 | Msa0921480:CDS | 45.0% | |
| CTTTCCCTTGGGTAAGCTAA+GGG | + | chr6_2:58760749-58760768 | None:intergenic | 45.0% | |
| !! | AACTAAATTTATAAATTTAT+AGG | - | chr6_2:58758521-58758540 | Msa0921480:intron | 5.0% |
| !! | GGTTAGCATTGATGGTGGTG+AGG | - | chr6_2:58756193-58756212 | Msa0921480:CDS | 50.0% |
| !! | TGGTGGATTGCGTGTGTTTG+TGG | - | chr6_2:58756368-58756387 | Msa0921480:CDS | 50.0% |
| GATGATGTCCTTCTTGTGGC+TGG | - | chr6_2:58756462-58756481 | Msa0921480:CDS | 50.0% | |
| CAACATCACCAGCCACAAGA+AGG | + | chr6_2:58756473-58756492 | None:intergenic | 50.0% | |
| CACCAAAGGTCATGATTCCC+AGG | + | chr6_2:58756567-58756586 | None:intergenic | 50.0% | |
| GGCTGTGATTAAGGCTGCAT+CGG | - | chr6_2:58756825-58756844 | Msa0921480:intron | 50.0% | |
| ! | ACGCTCCAGAGTCCAGTTTT+AGG | - | chr6_2:58758928-58758947 | Msa0921480:intron | 50.0% |
| ! | GTCCCACATTGGATTAGGGA+TGG | - | chr6_2:58758970-58758989 | Msa0921480:intron | 50.0% |
| GGCCATCCCTAATCCAATGT+GGG | + | chr6_2:58758975-58758994 | None:intergenic | 50.0% | |
| AGGCCATCCCTAATCCAATG+TGG | + | chr6_2:58758976-58758995 | None:intergenic | 50.0% | |
| !! | CGGTTTTGTGGGGTCAAGTA+AGG | - | chr6_2:58759039-58759058 | Msa0921480:intron | 50.0% |
| ATGGGTGGCCTAGTAGATCT+TGG | + | chr6_2:58759100-58759119 | None:intergenic | 50.0% | |
| CTACTAGGCCACCCATTATC+AGG | - | chr6_2:58759104-58759123 | Msa0921480:intron | 50.0% | |
| GGACGGAGTGACCTGATAAT+GGG | + | chr6_2:58759118-58759137 | None:intergenic | 50.0% | |
| TGGACGGAGTGACCTGATAA+TGG | + | chr6_2:58759119-58759138 | None:intergenic | 50.0% | |
| TGGAAGTCCTTACACGCCTA+AGG | + | chr6_2:58759381-58759400 | None:intergenic | 50.0% | |
| CATTGGGCCAGTTACATGCA+TGG | + | chr6_2:58759401-58759420 | None:intergenic | 50.0% | |
| CATGCATGTAACTGGCCCAA+TGG | - | chr6_2:58759399-58759418 | Msa0921480:CDS | 50.0% | |
| CCTGGGAACAAAGTGGGAAA+AGG | + | chr6_2:58759529-58759548 | None:intergenic | 50.0% | |
| ! | CCTTTTCCCACTTTGTTCCC+AGG | - | chr6_2:58759526-58759545 | Msa0921480:intron | 50.0% |
| ! | TTCTCGGATTAGGCGTGTCT+TGG | - | chr6_2:58759918-58759937 | Msa0921480:intron | 50.0% |
| TGTCCGTATCCTTGCTCCAT+AGG | - | chr6_2:58760055-58760074 | Msa0921480:intron | 50.0% | |
| CAGCCTATGGAGCAAGGATA+CGG | + | chr6_2:58760061-58760080 | None:intergenic | 50.0% | |
| CCTTTCCCTTGGGTAAGCTA+AGG | + | chr6_2:58760750-58760769 | None:intergenic | 50.0% | |
| CCTTAGCTTACCCAAGGGAA+AGG | - | chr6_2:58760747-58760766 | Msa0921480:five_prime_UTR | 50.0% | |
| !! | TCTGCAGCTTTAGGGGACAC+TGG | - | chr6_2:58756348-58756367 | Msa0921480:CDS | 55.0% |
| CCTAATGCACCCACAACCGT+TGG | + | chr6_2:58757531-58757550 | None:intergenic | 55.0% | |
| CCAACGGTTGTGGGTGCATT+AGG | - | chr6_2:58757528-58757547 | Msa0921480:CDS | 55.0% | |
| AGGCTATCGCATCCCGTCTT+TGG | - | chr6_2:58757702-58757721 | Msa0921480:intron | 55.0% | |
| ! | TCGCATCCCGTCTTTGGAGA+TGG | - | chr6_2:58757708-58757727 | Msa0921480:intron | 55.0% |
| ! | TGCCATGCTTTGTGCTGGTC+TGG | - | chr6_2:58757967-58757986 | Msa0921480:intron | 55.0% |
| TGCCAGACCAGCACAAAGCA+TGG | + | chr6_2:58757972-58757991 | None:intergenic | 55.0% | |
| TGACCCGAGTGGTCCGATAA+CGG | + | chr6_2:58758909-58758928 | None:intergenic | 55.0% | |
| !! | CGGAGTGACCTGATAATGGG+TGG | + | chr6_2:58759115-58759134 | None:intergenic | 55.0% |
| AGGTCACTCCGTCCAGTCTT+GGG | - | chr6_2:58759124-58759143 | Msa0921480:intron | 55.0% | |
| ACATCCCTCACACCCAAGAC+TGG | + | chr6_2:58759139-58759158 | None:intergenic | 55.0% | |
| GCACGGACACTTCTCGGATT+AGG | - | chr6_2:58759908-58759927 | Msa0921480:intron | 55.0% | |
| TACGGACACAAGGCACGACA+CGG | + | chr6_2:58760043-58760062 | None:intergenic | 55.0% | |
| GGAGCAAGGATACGGACACA+AGG | + | chr6_2:58760053-58760072 | None:intergenic | 55.0% | |
| CGTATCCTTGCTCCATAGGC+TGG | - | chr6_2:58760059-58760078 | Msa0921480:intron | 55.0% | |
| AGGCACCCTTAGCTTACCCA+AGG | - | chr6_2:58760741-58760760 | Msa0921480:exon | 55.0% | |
| GGCACCCTTAGCTTACCCAA+GGG | - | chr6_2:58760742-58760761 | Msa0921480:exon | 55.0% | |
| !! | GCAGCTTTAGGGGACACTGG+TGG | - | chr6_2:58756351-58756370 | Msa0921480:CDS | 60.0% |
| !! | TGACCTTTGGTGTCGTCGCG+AGG | - | chr6_2:58756575-58756594 | Msa0921480:intron | 60.0% |
| !! | GACCTTTGGTGTCGTCGCGA+GGG | - | chr6_2:58756576-58756595 | Msa0921480:intron | 60.0% |
| CCACCCGTTATCGGACCACT+CGG | - | chr6_2:58758902-58758921 | Msa0921480:intron | 60.0% | |
| CACCCGTTATCGGACCACTC+GGG | - | chr6_2:58758903-58758922 | Msa0921480:intron | 60.0% | |
| GACCCGAGTGGTCCGATAAC+GGG | + | chr6_2:58758908-58758927 | None:intergenic | 60.0% | |
| CAGGTCACTCCGTCCAGTCT+TGG | - | chr6_2:58759123-58759142 | Msa0921480:intron | 60.0% | |
| TCCGTCCAGTCTTGGGTGTG+AGG | - | chr6_2:58759131-58759150 | Msa0921480:intron | 60.0% | |
| CCCTCACACCCAAGACTGGA+CGG | + | chr6_2:58759135-58759154 | None:intergenic | 60.0% | |
| CCGTCCAGTCTTGGGTGTGA+GGG | - | chr6_2:58759132-58759151 | Msa0921480:intron | 60.0% | |
| GTCCCTCGCGACGACACCAA+AGG | + | chr6_2:58756581-58756600 | None:intergenic | 65.0% | |
| !! | CCGAGTGGTCCGATAACGGG+TGG | + | chr6_2:58758905-58758924 | None:intergenic | 65.0% |
| !! | ACTCTGGAGCGTGACCCGAG+TGG | + | chr6_2:58758920-58758939 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 58755924 | 58761023 | 58755924 | ID=Msa0921480;Name=Msa0921480 |
| chr6_2 | mRNA | 58755924 | 58761023 | 58755924 | ID=Msa0921480-mRNA-1;Parent=Msa0921480;Name=Msa0921480-mRNA-1;_AED=0.06;_eAED=0.06;_QI=119|1|1|1|0.83|0.71|7|65|383 |
| chr6_2 | exon | 58755924 | 58756214 | 58755924 | ID=Msa0921480-mRNA-1:exon:8799;Parent=Msa0921480-mRNA-1 |
| chr6_2 | exon | 58756319 | 58756501 | 58756319 | ID=Msa0921480-mRNA-1:exon:8798;Parent=Msa0921480-mRNA-1 |
| chr6_2 | exon | 58757400 | 58757563 | 58757400 | ID=Msa0921480-mRNA-1:exon:8797;Parent=Msa0921480-mRNA-1 |
| chr6_2 | exon | 58759218 | 58759271 | 58759218 | ID=Msa0921480-mRNA-1:exon:8796;Parent=Msa0921480-mRNA-1 |
| chr6_2 | exon | 58759366 | 58759485 | 58759366 | ID=Msa0921480-mRNA-1:exon:8795;Parent=Msa0921480-mRNA-1 |
| chr6_2 | exon | 58760339 | 58760766 | 58760339 | ID=Msa0921480-mRNA-1:exon:8794;Parent=Msa0921480-mRNA-1 |
| chr6_2 | exon | 58760928 | 58761023 | 58760928 | ID=Msa0921480-mRNA-1:exon:8793;Parent=Msa0921480-mRNA-1 |
| chr6_2 | five_prime_UTR | 58760928 | 58761023 | 58760928 | ID=Msa0921480-mRNA-1:five_prime_utr;Parent=Msa0921480-mRNA-1 |
| chr6_2 | five_prime_UTR | 58760744 | 58760766 | 58760744 | ID=Msa0921480-mRNA-1:five_prime_utr;Parent=Msa0921480-mRNA-1 |
| chr6_2 | CDS | 58760339 | 58760743 | 58760339 | ID=Msa0921480-mRNA-1:cds;Parent=Msa0921480-mRNA-1 |
| chr6_2 | CDS | 58759366 | 58759485 | 58759366 | ID=Msa0921480-mRNA-1:cds;Parent=Msa0921480-mRNA-1 |
| chr6_2 | CDS | 58759218 | 58759271 | 58759218 | ID=Msa0921480-mRNA-1:cds;Parent=Msa0921480-mRNA-1 |
| chr6_2 | CDS | 58757400 | 58757563 | 58757400 | ID=Msa0921480-mRNA-1:cds;Parent=Msa0921480-mRNA-1 |
| chr6_2 | CDS | 58756319 | 58756501 | 58756319 | ID=Msa0921480-mRNA-1:cds;Parent=Msa0921480-mRNA-1 |
| chr6_2 | CDS | 58755989 | 58756214 | 58755989 | ID=Msa0921480-mRNA-1:cds;Parent=Msa0921480-mRNA-1 |
| chr6_2 | three_prime_UTR | 58755924 | 58755988 | 58755924 | ID=Msa0921480-mRNA-1:three_prime_utr;Parent=Msa0921480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
