Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921730 | XP_003619851.3 | 93.007 | 429 | 19 | 1 | 1 | 418 | 1 | 429 | 0.0 | 802 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921730 | sp|Q9LVI4|TIF6B_ARATH | 36.790 | 405 | 158 | 18 | 1 | 380 | 1 | 332 | 5.10e-42 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0921730 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0921730 | Msa0994570 | 0.911829 | 3.901605e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921730 | MtrunA17_Chr6g0478581 | 93.007 | 429 | 19 | 1 | 1 | 418 | 1 | 429 | 0.0 | 802 |
| Msa0921730 | MtrunA17_Chr1g0161031 | 29.286 | 420 | 176 | 16 | 1 | 383 | 1 | 336 | 1.54e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921730 | AT3G17860.1 | 36.790 | 405 | 158 | 18 | 1 | 380 | 1 | 332 | 5.18e-43 | 154 |
| Msa0921730 | AT3G17860.2 | 35.753 | 372 | 142 | 17 | 34 | 380 | 20 | 319 | 6.84e-33 | 127 |
| Msa0921730 | AT3G17860.3 | 35.580 | 371 | 142 | 17 | 35 | 380 | 1 | 299 | 2.07e-32 | 125 |
| Msa0921730 | AT3G17860.4 | 35.580 | 371 | 142 | 17 | 35 | 380 | 1 | 299 | 2.07e-32 | 125 |
| Msa0921730 | AT1G48500.1 | 30.025 | 393 | 169 | 19 | 1 | 385 | 1 | 295 | 3.86e-24 | 102 |
| Msa0921730 | AT1G48500.2 | 31.854 | 383 | 138 | 19 | 1 | 367 | 1 | 276 | 5.64e-21 | 92.4 |
| Msa0921730 | AT1G48500.3 | 33.508 | 191 | 70 | 9 | 35 | 213 | 2 | 147 | 1.94e-12 | 67.4 |
Find 96 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATACATGTTCTTCTTAA+AGG | 0.090775 | 6_2:+59283113 | None:intergenic |
| TGTTCTTCTTAAAGGCAAAT+TGG | 0.268291 | 6_2:+59283121 | None:intergenic |
| CAATCTAATCATGTTATTAC+TGG | 0.306462 | 6_2:-59284939 | Msa0921730:CDS |
| GTTTCAAACTCACAAACTTT+TGG | 0.315622 | 6_2:-59284897 | Msa0921730:CDS |
| TTTGATGCAGTTAGGAGTTC+AGG | 0.316880 | 6_2:-59286007 | Msa0921730:intron |
| GTCTAATCAGAAATCATTCT+TGG | 0.326422 | 6_2:-59285834 | Msa0921730:CDS |
| AATCTCTATTCCTTCCAAAA+AGG | 0.344054 | 6_2:-59284268 | Msa0921730:CDS |
| GTTGGAAGCATCTTCTTTCA+TGG | 0.359919 | 6_2:+59288851 | None:intergenic |
| GCTTGGCAATGGTGAGAGAT+AGG | 0.360283 | 6_2:+59284224 | None:intergenic |
| AGTTTCTCCATTGATTTCTC+TGG | 0.361158 | 6_2:-59283164 | Msa0921730:CDS |
| AAATGCCCCTACTAACCATT+TGG | 0.365374 | 6_2:-59283965 | Msa0921730:CDS |
| TACTGTACCACCATAAAATA+TGG | 0.366528 | 6_2:+59284527 | None:intergenic |
| CCTGGTTGAATCACATTTGT+AGG | 0.375793 | 6_2:+59283907 | None:intergenic |
| GTCACAATCATAAGAACTTT+AGG | 0.381397 | 6_2:-59284138 | Msa0921730:CDS |
| GGAGATTCCAAATGGTTAGT+AGG | 0.395561 | 6_2:+59283958 | None:intergenic |
| GTCACAATAATAAGATCTTT+AGG | 0.396082 | 6_2:-59283994 | Msa0921730:CDS |
| AGGTGTAGTACCATTGGATT+TGG | 0.407015 | 6_2:+59284560 | None:intergenic |
| AGAGCCAGCTATGGAACCTT+TGG | 0.407344 | 6_2:+59284836 | None:intergenic |
| TCTGATCCAGTGCTGCATTC+AGG | 0.408286 | 6_2:+59283194 | None:intergenic |
| TGAGAGGACTTTGCAATTGA+AGG | 0.412113 | 6_2:+59284114 | None:intergenic |
| ATTGCTACTTGACCCTCCCT+TGG | 0.417950 | 6_2:+59284023 | None:intergenic |
| AAGTGTTTGGTTGTGGTGAA+TGG | 0.423093 | 6_2:+59289021 | None:intergenic |
| CAGTAATAACATGATTAGAT+TGG | 0.431253 | 6_2:+59284940 | None:intergenic |
| CAATTCTTTAATTTGATCAC+TGG | 0.434476 | 6_2:-59283051 | Msa0921730:three_prime_UTR |
| TAGCTGGCTCTACTGACTTA+AGG | 0.436507 | 6_2:-59284824 | Msa0921730:intron |
| TTGGATGGAAGAACAGATAA+AGG | 0.437228 | 6_2:+59284855 | None:intergenic |
| CCATCCAAAGGTTCCATAGC+TGG | 0.442144 | 6_2:-59284840 | Msa0921730:CDS |
| GAAGTCATTGGGAGAGAACT+TGG | 0.446941 | 6_2:+59284063 | None:intergenic |
| GAACTTGCATGAGAAGTCAT+TGG | 0.447319 | 6_2:+59284051 | None:intergenic |
| TTGCTACTTGATCCTCCCCT+TGG | 0.449675 | 6_2:+59284168 | None:intergenic |
| GCCTTTAAGAAGAACATGTA+TGG | 0.452229 | 6_2:-59283114 | Msa0921730:CDS |
| CGCGAAAAGCATCGCTGACT+CGG | 0.452418 | 6_2:-59283597 | Msa0921730:CDS |
| GCACTTGCATGAGAGGTCAT+TGG | 0.457131 | 6_2:+59284195 | None:intergenic |
| GAGATTCCAAATGGTTAGTA+GGG | 0.462551 | 6_2:+59283959 | None:intergenic |
| AGATCTAGCATGTTGTCATA+TGG | 0.465163 | 6_2:-59282980 | Msa0921730:three_prime_UTR |
| GAGGTCATTGGAAGAGGGCT+TGG | 0.466655 | 6_2:+59284207 | None:intergenic |
| TAAAATATGGTCAACTGAGC+AGG | 0.468648 | 6_2:+59284540 | None:intergenic |
| TTGCTACTTGACCCTCCCTT+GGG | 0.470974 | 6_2:+59284024 | None:intergenic |
| ACAGAGAAAAGTGAAGTGTT+TGG | 0.471703 | 6_2:+59289008 | None:intergenic |
| GCTACAGAAGTAGCAACAAT+AGG | 0.472407 | 6_2:+59283937 | None:intergenic |
| ATGGATCCAGTAGCTTCATC+TGG | 0.480372 | 6_2:-59285890 | Msa0921730:CDS |
| AGGAATTCTCTTTCCATATG+TGG | 0.481576 | 6_2:+59288906 | None:intergenic |
| ATCATGTTACTAGCTGGAAA+TGG | 0.485043 | 6_2:-59284309 | Msa0921730:CDS |
| AACTTGCATGAGAAGTCATT+GGG | 0.486290 | 6_2:+59284052 | None:intergenic |
| ATATATCCAGATGAAGCTAC+TGG | 0.486559 | 6_2:+59285884 | None:intergenic |
| AGAATAATACTCATGAAGAT+AGG | 0.490063 | 6_2:-59285928 | Msa0921730:CDS |
| TTCTTGAATGACATGAATTG+AGG | 0.493289 | 6_2:+59285947 | None:intergenic |
| CTGAGCAGGTGTAGTACCAT+TGG | 0.495191 | 6_2:+59284554 | None:intergenic |
| GCATGAGAGGTCATTGGAAG+AGG | 0.495990 | 6_2:+59284201 | None:intergenic |
| ATCATTCTTGGGTGTGACAC+AGG | 0.504017 | 6_2:-59285822 | Msa0921730:intron |
| AACTTGGCAAAGGTGAGAGA+TGG | 0.504464 | 6_2:+59284079 | None:intergenic |
| TCTAATCAGAAATCATTCTT+GGG | 0.505529 | 6_2:-59285833 | Msa0921730:CDS |
| AAGGCTATCATGTTACTAGC+TGG | 0.511104 | 6_2:-59284315 | Msa0921730:CDS |
| CAACAATAGGAGATTCCAAA+TGG | 0.511822 | 6_2:+59283950 | None:intergenic |
| TAGGTCAAGAAACAGTGTTA+TGG | 0.516069 | 6_2:-59285909 | Msa0921730:CDS |
| AACAGATAAAGGTGTGGCAG+AGG | 0.516274 | 6_2:+59284866 | None:intergenic |
| TCATGCAAGTTCTTATCCCA+AGG | 0.526316 | 6_2:-59284040 | Msa0921730:CDS |
| TGGTTGAGCACTTGCATGAG+AGG | 0.528179 | 6_2:+59284188 | None:intergenic |
| CTTCTTAAAGGCAAATTGGT+GGG | 0.529876 | 6_2:+59283125 | None:intergenic |
| TTATCTGTTCTTCCATCCAA+AGG | 0.530505 | 6_2:-59284852 | Msa0921730:CDS |
| TCTTCTTTCATGGTAGTCCA+TGG | 0.530904 | 6_2:+59288861 | None:intergenic |
| AAAGCAAGAGAGTAGAAGAA+AGG | 0.533416 | 6_2:+59289053 | None:intergenic |
| TGGTTAGTAGGGGCATTTGA+AGG | 0.535343 | 6_2:+59283970 | None:intergenic |
| AAATCACCTGAATGCAGCAC+TGG | 0.539481 | 6_2:-59283200 | Msa0921730:CDS |
| ACTTGGCAAAGGTGAGAGAT+GGG | 0.542203 | 6_2:+59284080 | None:intergenic |
| TCATGCAAGTGCTCAACCAA+GGG | 0.544918 | 6_2:-59284184 | Msa0921730:CDS |
| CTTGGCAATGGTGAGAGATA+GGG | 0.546183 | 6_2:+59284225 | None:intergenic |
| ACTTGAACCAGAGAAATCAA+TGG | 0.546674 | 6_2:+59283157 | None:intergenic |
| AAAAGTGAAGTGTTTGGTTG+TGG | 0.556120 | 6_2:+59289014 | None:intergenic |
| TCTTCTTAAAGGCAAATTGG+TGG | 0.560082 | 6_2:+59283124 | None:intergenic |
| CTCATGCAAGTGCTCAACCA+AGG | 0.562068 | 6_2:-59284185 | Msa0921730:CDS |
| CATGAGAGGTCATTGGAAGA+GGG | 0.576369 | 6_2:+59284202 | None:intergenic |
| TTTGCATCAGAACTTTGCAT+AGG | 0.576624 | 6_2:+59285005 | None:intergenic |
| TGAATGACATGAATTGAGGA+AGG | 0.578633 | 6_2:+59285951 | None:intergenic |
| ATTGGAAGAGGGCTTGGCAA+TGG | 0.579330 | 6_2:+59284213 | None:intergenic |
| TAAGTCAGTAGAGCCAGCTA+TGG | 0.584304 | 6_2:+59284827 | None:intergenic |
| CATATGGAAAGAGAATTCCT+TGG | 0.590006 | 6_2:-59288903 | Msa0921730:CDS |
| CCAGCTATGGAACCTTTGGA+TGG | 0.594701 | 6_2:+59284840 | None:intergenic |
| CTTAAAGGCAAATTGGTGGG+TGG | 0.595542 | 6_2:+59283128 | None:intergenic |
| CCTACAAATGTGATTCAACC+AGG | 0.596560 | 6_2:-59283907 | Msa0921730:intron |
| CATGCAAGTTCTTATCCCAA+GGG | 0.608931 | 6_2:-59284039 | Msa0921730:CDS |
| AGGAATTGTTCCAAATCCAA+TGG | 0.614409 | 6_2:-59284570 | Msa0921730:CDS |
| ATGGGATAGGTCATTGTGAG+AGG | 0.619583 | 6_2:+59284098 | None:intergenic |
| AAGCAAGTAGAAAACAAGCA+TGG | 0.620391 | 6_2:-59285041 | Msa0921730:CDS |
| GCAAAGGTGAGAGATGGGAT+AGG | 0.630123 | 6_2:+59284085 | None:intergenic |
| GCAAGTTCTTATCCCAAGGG+AGG | 0.631848 | 6_2:-59284036 | Msa0921730:CDS |
| TGTTATTACTGGAATCAACA+TGG | 0.635983 | 6_2:-59284928 | Msa0921730:CDS |
| CAAGTTCTTATCCCAAGGGA+GGG | 0.640245 | 6_2:-59284035 | Msa0921730:CDS |
| ATTGGGAGAGAACTTGGCAA+AGG | 0.651165 | 6_2:+59284069 | None:intergenic |
| GCAAGTGCTCAACCAAGGGG+AGG | 0.667306 | 6_2:-59284180 | Msa0921730:CDS |
| AGATTCCAAATGGTTAGTAG+GGG | 0.670933 | 6_2:+59283960 | None:intergenic |
| TTAGGAGTTCAGGAATGCAG+TGG | 0.686957 | 6_2:-59285997 | Msa0921730:CDS |
| GCAATGGTGAGAGATAGGGT+TGG | 0.692673 | 6_2:+59284229 | None:intergenic |
| TCCAACAAACCAAAAGACCA+AGG | 0.694197 | 6_2:-59288834 | Msa0921730:intron |
| CATGCAAGTGCTCAACCAAG+GGG | 0.695373 | 6_2:-59284183 | Msa0921730:CDS |
| TGGAAGAACAGATAAAGGTG+TGG | 0.695623 | 6_2:+59284860 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATTAAATTAACAAAAA+CGG | - | chr6_2:59283380-59283399 | Msa0921730:intron | 10.0% |
| !! | ATTTCTCTAATAATAATATA+AGG | - | chr6_2:59283732-59283751 | Msa0921730:intron | 10.0% |
| !!! | ATAAATGCTTATATTTTTTT+TGG | - | chr6_2:59284787-59284806 | Msa0921730:intron | 10.0% |
| !!! | TTATATTTTTTTTGGTTAAA+AGG | - | chr6_2:59284795-59284814 | Msa0921730:intron | 10.0% |
| !! | TAATTATATAATATACTAGA+TGG | + | chr6_2:59285271-59285290 | None:intergenic | 10.0% |
| !! | ATAATTATATTATATGATGA+TGG | - | chr6_2:59285284-59285303 | Msa0921730:intron | 10.0% |
| !!! | ATATAATCTTTTAAAAAACA+TGG | - | chr6_2:59285674-59285693 | Msa0921730:intron | 10.0% |
| !!! | TTTATTTATTTATTTTGATG+GGG | - | chr6_2:59285797-59285816 | Msa0921730:intron | 10.0% |
| !!! | TTATTTTTTAATGTTGATTT+AGG | - | chr6_2:59286026-59286045 | Msa0921730:intron | 10.0% |
| !!! | AATTATTTTGATATATACAA+TGG | + | chr6_2:59286335-59286354 | None:intergenic | 10.0% |
| !! | TTCATGGAAAAAAAAAAAAA+AGG | + | chr6_2:59283305-59283324 | None:intergenic | 15.0% |
| !!! | TAACTTGTAGATAATAATAA+AGG | - | chr6_2:59283553-59283572 | Msa0921730:intron | 15.0% |
| !! | TGTTTATAAGATAAAATTTC+TGG | + | chr6_2:59283624-59283643 | None:intergenic | 15.0% |
| !!! | GTTTTTAAATATAAATATCG+TGG | - | chr6_2:59284966-59284985 | Msa0921730:CDS | 15.0% |
| !! | CTTAGATTTAATATTAAACA+TGG | + | chr6_2:59285079-59285098 | None:intergenic | 15.0% |
| !! | CATGTTTAATATTAAATCTA+AGG | - | chr6_2:59285077-59285096 | Msa0921730:intron | 15.0% |
| !!! | AAATTGTTATTTATTTCTCA+AGG | + | chr6_2:59285134-59285153 | None:intergenic | 15.0% |
| !! | ATAAAATATTCATATACGAA+TGG | - | chr6_2:59285192-59285211 | Msa0921730:intron | 15.0% |
| !!! | TTATTAGTTTATTGTTATCT+AGG | + | chr6_2:59285612-59285631 | None:intergenic | 15.0% |
| !!! | TATATATTGAGAAACAATTT+TGG | - | chr6_2:59286458-59286477 | Msa0921730:intron | 15.0% |
| !! | TATCTATATCTTATAATTTG+TGG | - | chr6_2:59286931-59286950 | Msa0921730:intron | 15.0% |
| !!! | AGAATTTTTTTGTTTTCTAT+AGG | - | chr6_2:59287485-59287504 | Msa0921730:intron | 15.0% |
| !!! | TATAATGAAATTATCCTTTT+TGG | + | chr6_2:59287830-59287849 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTGTACTTACTTA+GGG | - | chr6_2:59288826-59288845 | Msa0921730:intron | 15.0% |
| !!! | TTATAGTTTTATATCATGCA+TGG | - | chr6_2:59283460-59283479 | Msa0921730:intron | 20.0% |
| !!! | TATAGTTTTATATCATGCAT+GGG | - | chr6_2:59283461-59283480 | Msa0921730:intron | 20.0% |
| !!! | TTTTGAACTTATCCATTAAA+GGG | + | chr6_2:59283813-59283832 | None:intergenic | 20.0% |
| !!! | TTTTTGAACTTATCCATTAA+AGG | + | chr6_2:59283814-59283833 | None:intergenic | 20.0% |
| !! | TTAATTCAATTATGTAGCAT+AGG | + | chr6_2:59283915-59283934 | None:intergenic | 20.0% |
| !!! | AAAATTTTATATTAGCACAC+TGG | - | chr6_2:59283963-59283982 | Msa0921730:CDS | 20.0% |
| !!! | TTTTTTCTTTTTGATGCAAT+GGG | + | chr6_2:59284171-59284190 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTTTGATGCAA+TGG | + | chr6_2:59284172-59284191 | None:intergenic | 20.0% |
| !!! | TTATTTCCTTTTTATCGATT+AGG | - | chr6_2:59284380-59284399 | Msa0921730:intron | 20.0% |
| !!! | AAATGAAATGGTTTTCTTTT+AGG | + | chr6_2:59284646-59284665 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTGGTTAAAAGGT+TGG | - | chr6_2:59284799-59284818 | Msa0921730:intron | 20.0% |
| !!! | ATATATTTTATTGCATAACG+TGG | - | chr6_2:59284881-59284900 | Msa0921730:CDS | 20.0% |
| !! | GAAGCATAGTATTATTTAAT+GGG | + | chr6_2:59285511-59285530 | None:intergenic | 20.0% |
| !! | TGAAGCATAGTATTATTTAA+TGG | + | chr6_2:59285512-59285531 | None:intergenic | 20.0% |
| !! | AAATAATACTATGCTTCATA+AGG | - | chr6_2:59285514-59285533 | Msa0921730:intron | 20.0% |
| !! | AAACTAATAACAAAGTAACA+AGG | - | chr6_2:59285622-59285641 | Msa0921730:intron | 20.0% |
| !!! | AAACTTGTTATTTCAAAGAT+GGG | - | chr6_2:59286000-59286019 | Msa0921730:CDS | 20.0% |
| !!! | AAAATTGATTTTGACCTATT+TGG | + | chr6_2:59286703-59286722 | None:intergenic | 20.0% |
| !! | TCAAAGTAAAATCTAGTATA+TGG | + | chr6_2:59286769-59286788 | None:intergenic | 20.0% |
| !!! | TAGATATAAGCTTTTAATGT+GGG | + | chr6_2:59286917-59286936 | None:intergenic | 20.0% |
| !!! | ATAGATATAAGCTTTTAATG+TGG | + | chr6_2:59286918-59286937 | None:intergenic | 20.0% |
| !!! | TATATCTTATAATTTGTGGA+AGG | - | chr6_2:59286935-59286954 | Msa0921730:intron | 20.0% |
| !!! | TACTTCTTTTGATATTTTGT+AGG | - | chr6_2:59287003-59287022 | Msa0921730:intron | 20.0% |
| !!! | TGATATTTTGTAGGAAAATT+TGG | - | chr6_2:59287012-59287031 | Msa0921730:intron | 20.0% |
| !! | AAATTTGTGATATGATATTG+TGG | - | chr6_2:59287440-59287459 | Msa0921730:intron | 20.0% |
| !! | AAAAGATAAATATACCAGAT+AGG | + | chr6_2:59288213-59288232 | None:intergenic | 20.0% |
| !!! | TTCAGCATTTGTTATATTTA+TGG | - | chr6_2:59288271-59288290 | Msa0921730:intron | 20.0% |
| !!! | CATTTTTTTTGTACTTACTT+AGG | - | chr6_2:59288825-59288844 | Msa0921730:intron | 20.0% |
| !! | AGTAAAATACTACAAAAAAG+TGG | + | chr6_2:59289072-59289091 | None:intergenic | 20.0% |
| ! | GAAAATAGAAAAAGATACCT+TGG | + | chr6_2:59283267-59283286 | None:intergenic | 25.0% |
| ! | AAAAAAAAGGAAAGCAGAAA+AGG | + | chr6_2:59283292-59283311 | None:intergenic | 25.0% |
| !!! | ATAGTTTTATATCATGCATG+GGG | - | chr6_2:59283462-59283481 | Msa0921730:intron | 25.0% |
| ! | AATAATATAAGGAAGAACCA+TGG | - | chr6_2:59283743-59283762 | Msa0921730:intron | 25.0% |
| ! | GAAAAAAGCAAAAGAACATA+AGG | + | chr6_2:59283790-59283809 | None:intergenic | 25.0% |
| ! | TTTGAACTTATCCATTAAAG+GGG | + | chr6_2:59283812-59283831 | None:intergenic | 25.0% |
| ! | GGATAAGTTCAAAAATTCTA+AGG | - | chr6_2:59283819-59283838 | Msa0921730:intron | 25.0% |
| !! | TAAAGTATCTATCTATCACA+TGG | - | chr6_2:59283940-59283959 | Msa0921730:CDS | 25.0% |
| ! | AATTCAAACTTATATCCACA+TGG | + | chr6_2:59284139-59284158 | None:intergenic | 25.0% |
| !! | AAAAAAGTGTGTTGTGATAT+AGG | - | chr6_2:59284186-59284205 | Msa0921730:CDS | 25.0% |
| !! | AAAAAGTGTGTTGTGATATA+GGG | - | chr6_2:59284187-59284206 | Msa0921730:CDS | 25.0% |
| ! | GGTCAAAATAAAATAGATGT+GGG | - | chr6_2:59284208-59284227 | Msa0921730:CDS | 25.0% |
| !!! | TTTTTTACAAGAAGTACAAC+TGG | - | chr6_2:59284269-59284288 | Msa0921730:CDS | 25.0% |
| ! | CATAAACCTAATCGATAAAA+AGG | + | chr6_2:59284389-59284408 | None:intergenic | 25.0% |
| ! | CATCAAAATCAAGAAAATGA+AGG | + | chr6_2:59284908-59284927 | None:intergenic | 25.0% |
| !! | ATTAAATCTAAGGTCTAACA+TGG | - | chr6_2:59285087-59285106 | Msa0921730:intron | 25.0% |
| !! | TTAAATCTAAGGTCTAACAT+GGG | - | chr6_2:59285088-59285107 | Msa0921730:intron | 25.0% |
| !! | TTTTTATGTTAATGACAAGC+TGG | - | chr6_2:59285153-59285172 | Msa0921730:intron | 25.0% |
| !!! | TGATGGACTATGATTAAATA+AGG | - | chr6_2:59285301-59285320 | Msa0921730:intron | 25.0% |
| !!! | GATGGACTATGATTAAATAA+GGG | - | chr6_2:59285302-59285321 | Msa0921730:intron | 25.0% |
| !! | ATAGAAGACACATTTTATGA+AGG | - | chr6_2:59285330-59285349 | Msa0921730:intron | 25.0% |
| !! | TTTTAACAAGTCACATCTTA+AGG | + | chr6_2:59285458-59285477 | None:intergenic | 25.0% |
| ! | ATTGTTATCTAGGTAATAAC+TGG | + | chr6_2:59285602-59285621 | None:intergenic | 25.0% |
| !!! | GCATCTTCTAAATAGTTTTA+TGG | - | chr6_2:59285731-59285750 | Msa0921730:intron | 25.0% |
| !!! | CATCTTTGAAATAACAAGTT+TGG | + | chr6_2:59286001-59286020 | None:intergenic | 25.0% |
| !!! | CAAACTTGTTATTTCAAAGA+TGG | - | chr6_2:59285999-59286018 | Msa0921730:CDS | 25.0% |
| ! | TTCTTAAATTTGATGCAGTT+AGG | - | chr6_2:59286066-59286085 | Msa0921730:intron | 25.0% |
| ! | AGAATAATACTCATGAAGAT+AGG | - | chr6_2:59286153-59286172 | Msa0921730:intron | 25.0% |
| ! | TCTAATCAGAAATCATTCTT+GGG | - | chr6_2:59286248-59286267 | Msa0921730:intron | 25.0% |
| !!! | GACCAAATTTTAATGATGTT+TGG | - | chr6_2:59286431-59286450 | Msa0921730:intron | 25.0% |
| ! | GACCAAACATCATTAAAATT+TGG | + | chr6_2:59286436-59286455 | None:intergenic | 25.0% |
| ! | TGGTTTCAGATTCAATTATT+AGG | - | chr6_2:59286478-59286497 | Msa0921730:intron | 25.0% |
| ! | AGTCTAAAAATCAATTGTAG+AGG | - | chr6_2:59286625-59286644 | Msa0921730:intron | 25.0% |
| ! | AGTAAAATCTAGTATATGGT+TGG | + | chr6_2:59286765-59286784 | None:intergenic | 25.0% |
| ! | CAGTAATAACATGATTAGAT+TGG | + | chr6_2:59287144-59287163 | None:intergenic | 25.0% |
| ! | CAATCTAATCATGTTATTAC+TGG | - | chr6_2:59287142-59287161 | Msa0921730:intron | 25.0% |
| !!! | ATGTGTTTTATTAGAAATGC+GGG | + | chr6_2:59287360-59287379 | None:intergenic | 25.0% |
| !!! | CATGTGTTTTATTAGAAATG+CGG | + | chr6_2:59287361-59287380 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTTCTATAGGAGT+AGG | - | chr6_2:59287491-59287510 | Msa0921730:intron | 25.0% |
| ! | ACGCTATTAAGATAAGTTTA+CGG | + | chr6_2:59287623-59287642 | None:intergenic | 25.0% |
| !!! | GATTTTTATTTTCCATGACT+AGG | - | chr6_2:59287741-59287760 | Msa0921730:intron | 25.0% |
| !! | ATGAAATTATCCTTTTTGGA+AGG | + | chr6_2:59287826-59287845 | None:intergenic | 25.0% |
| ! | GTCACAATAATAAGATCTTT+AGG | - | chr6_2:59288087-59288106 | Msa0921730:intron | 25.0% |
| !!! | AGTTTTGTTGTGTTTATAGT+TGG | - | chr6_2:59288450-59288469 | Msa0921730:intron | 25.0% |
| !! | TTTTCTATACCTAATATCCA+AGG | + | chr6_2:59288578-59288597 | None:intergenic | 25.0% |
| ! | TTATATAAGTTCATTTGCGT+CGG | + | chr6_2:59288684-59288703 | None:intergenic | 25.0% |
| ! | ATTAAACTCAATGACCAAAT+TGG | - | chr6_2:59288736-59288755 | Msa0921730:intron | 25.0% |
| !!! | GATTTTTTGCTCATATAGTA+TGG | + | chr6_2:59288866-59288885 | None:intergenic | 25.0% |
| !!! | CAATTCTTTAATTTGATCAC+TGG | - | chr6_2:59289030-59289049 | Msa0921730:five_prime_UTR | 25.0% |
| !!! | CTGATTTTTTTCACCACATA+TGG | - | chr6_2:59283162-59283181 | Msa0921730:CDS | 30.0% |
| !! | AAAAAGATACCTTGGTCTTT+TGG | + | chr6_2:59283259-59283278 | None:intergenic | 30.0% |
| TGTTGGTGCAAAATATTTCA+TGG | + | chr6_2:59283321-59283340 | None:intergenic | 30.0% | |
| AAATCTTAACCAATGCTCTT+AGG | + | chr6_2:59283595-59283614 | None:intergenic | 30.0% | |
| GAAATACTAATACGTGTCTT+TGG | + | chr6_2:59283717-59283736 | None:intergenic | 30.0% | |
| AAATTCATTCTTCTCTTCCA+TGG | + | chr6_2:59283763-59283782 | None:intergenic | 30.0% | |
| !!! | TTTGCTTTTTTCCCCTTTAA+TGG | - | chr6_2:59283798-59283817 | Msa0921730:intron | 30.0% |
| !! | CAAAAATTCTAAGGTTTCGT+AGG | - | chr6_2:59283828-59283847 | Msa0921730:intron | 30.0% |
| ATTCAATTATGTAGCATAGG+AGG | + | chr6_2:59283912-59283931 | None:intergenic | 30.0% | |
| TTTGAACCATAAGTATGACA+TGG | + | chr6_2:59283995-59284014 | None:intergenic | 30.0% | |
| TGTTTGATGTGTGGTATTTA+TGG | - | chr6_2:59284020-59284039 | Msa0921730:CDS | 30.0% | |
| ! | TAGTTGATATATAGTCCATG+TGG | - | chr6_2:59284121-59284140 | Msa0921730:CDS | 30.0% |
| GGGTCAAAATAAAATAGATG+TGG | - | chr6_2:59284207-59284226 | Msa0921730:CDS | 30.0% | |
| TCAGCTCATGTAAAATCTTA+AGG | - | chr6_2:59284504-59284523 | Msa0921730:intron | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr6_2:59285392-59285411 | Msa0921730:intron | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr6_2:59285398-59285417 | None:intergenic | 30.0% | |
| TTGTTAAAAAACACCACCAA+AGG | - | chr6_2:59285469-59285488 | Msa0921730:intron | 30.0% | |
| TGTTAAAAAACACCACCAAA+GGG | - | chr6_2:59285470-59285489 | Msa0921730:intron | 30.0% | |
| TTAAATTTATATGCCGTACC+TGG | - | chr6_2:59285576-59285595 | Msa0921730:intron | 30.0% | |
| !! | CTTTTAAAAAACATGGACTC+TGG | - | chr6_2:59285681-59285700 | Msa0921730:intron | 30.0% |
| TATCTTCACTGCTGAAAAAA+AGG | - | chr6_2:59285959-59285978 | Msa0921730:CDS | 30.0% | |
| TTCTTGAATGACATGAATTG+AGG | + | chr6_2:59286137-59286156 | None:intergenic | 30.0% | |
| GTCTAATCAGAAATCATTCT+TGG | - | chr6_2:59286247-59286266 | Msa0921730:intron | 30.0% | |
| CATTAAAATTTGGTCAAACG+TGG | + | chr6_2:59286426-59286445 | None:intergenic | 30.0% | |
| AGAATCAATTGTTATAACCG+TGG | + | chr6_2:59286533-59286552 | None:intergenic | 30.0% | |
| TCGATAGATTCATGTAAAAG+TGG | - | chr6_2:59286587-59286606 | Msa0921730:intron | 30.0% | |
| CGATAGATTCATGTAAAAGT+GGG | - | chr6_2:59286588-59286607 | Msa0921730:intron | 30.0% | |
| ! | ATAAGCTTTTAATGTGGGTT+AGG | + | chr6_2:59286912-59286931 | None:intergenic | 30.0% |
| !! | CTTGTTTTCTACTTGCTTTA+TGG | + | chr6_2:59287038-59287057 | None:intergenic | 30.0% |
| TGTTATTACTGGAATCAACA+TGG | - | chr6_2:59287153-59287172 | Msa0921730:intron | 30.0% | |
| ! | GTTTCAAACTCACAAACTTT+TGG | - | chr6_2:59287184-59287203 | Msa0921730:intron | 30.0% |
| !! | TGTGTTTTATTAGAAATGCG+GGG | + | chr6_2:59287359-59287378 | None:intergenic | 30.0% |
| TACTGTACCACCATAAAATA+TGG | + | chr6_2:59287557-59287576 | None:intergenic | 30.0% | |
| AACTTATCTTAATAGCGTAG+TGG | - | chr6_2:59287625-59287644 | Msa0921730:intron | 30.0% | |
| AATCTCTATTCCTTCCAAAA+AGG | - | chr6_2:59287813-59287832 | Msa0921730:intron | 30.0% | |
| GTCACAATCATAAGAACTTT+AGG | - | chr6_2:59287943-59287962 | Msa0921730:intron | 30.0% | |
| ATAGGCATACTATATATACC+TGG | + | chr6_2:59288195-59288214 | None:intergenic | 30.0% | |
| GTATATATAGTATGCCTATC+TGG | - | chr6_2:59288196-59288215 | Msa0921730:intron | 30.0% | |
| GCTTTACATAAACTAGAAGA+AGG | + | chr6_2:59288413-59288432 | None:intergenic | 30.0% | |
| !! | CTTAATATGTTTTTGAGCCT+TGG | - | chr6_2:59288558-59288577 | Msa0921730:intron | 30.0% |
| TGCTATTATGTTAGCCAATT+TGG | + | chr6_2:59288753-59288772 | None:intergenic | 30.0% | |
| ! | TTTTGTGATGTGATTTTCTG+AGG | - | chr6_2:59288796-59288815 | Msa0921730:intron | 30.0% |
| TGTTCTTCTTAAAGGCAAAT+TGG | + | chr6_2:59288963-59288982 | None:intergenic | 30.0% | |
| TCCATACATGTTCTTCTTAA+AGG | + | chr6_2:59288971-59288990 | None:intergenic | 30.0% | |
| AAAGCAAGAGAGTAGAAGAA+AGG | + | chr6_2:59283031-59283050 | None:intergenic | 35.0% | |
| ! | AAAAGTGAAGTGTTTGGTTG+TGG | + | chr6_2:59283070-59283089 | None:intergenic | 35.0% |
| ! | ACAGAGAAAAGTGAAGTGTT+TGG | + | chr6_2:59283076-59283095 | None:intergenic | 35.0% |
| AGGAATTCTCTTTCCATATG+TGG | + | chr6_2:59283178-59283197 | None:intergenic | 35.0% | |
| CATATGGAAAGAGAATTCCT+TGG | - | chr6_2:59283178-59283197 | Msa0921730:CDS | 35.0% | |
| !!! | TATTTTTGGAACTGAAGCCA+AGG | + | chr6_2:59283198-59283217 | None:intergenic | 35.0% |
| TCAGTTCCAAAAATAGTCCA+TGG | - | chr6_2:59283203-59283222 | Msa0921730:CDS | 35.0% | |
| TTTCACATCCCCATAACAAT+AGG | + | chr6_2:59283344-59283363 | None:intergenic | 35.0% | |
| ! | TCGTAGGAAGAACTTGTTTA+AGG | - | chr6_2:59283844-59283863 | Msa0921730:intron | 35.0% |
| ! | TTTATATTAGCACACTGGCT+AGG | - | chr6_2:59283968-59283987 | Msa0921730:CDS | 35.0% |
| ! | TTATATTAGCACACTGGCTA+GGG | - | chr6_2:59283969-59283988 | Msa0921730:CDS | 35.0% |
| !! | CAAAGTTGATGTTTGATGTG+TGG | - | chr6_2:59284011-59284030 | Msa0921730:CDS | 35.0% |
| !! | TCAAAGTTGATGTGTGAATG+TGG | - | chr6_2:59284044-59284063 | Msa0921730:CDS | 35.0% |
| ATCAACTAGCTCAAGAATTG+TGG | + | chr6_2:59284109-59284128 | None:intergenic | 35.0% | |
| TGTGTTAGTGTTTATCAGTG+TGG | - | chr6_2:59284705-59284724 | Msa0921730:intron | 35.0% | |
| TATGTTAGAAAACGTGCTCT+TGG | - | chr6_2:59284832-59284851 | Msa0921730:CDS | 35.0% | |
| TAGACTCTCATTCATACATC+AGG | + | chr6_2:59284994-59285013 | None:intergenic | 35.0% | |
| ! | TTTTGTTACAAGTCACCCTT+TGG | + | chr6_2:59285488-59285507 | None:intergenic | 35.0% |
| TGAATGACATGAATTGAGGA+AGG | + | chr6_2:59286133-59286152 | None:intergenic | 35.0% | |
| TAGGTCAAGAAACAGTGTTA+TGG | - | chr6_2:59286172-59286191 | Msa0921730:intron | 35.0% | |
| ATATATCCAGATGAAGCTAC+TGG | + | chr6_2:59286200-59286219 | None:intergenic | 35.0% | |
| AAGAACATTGAGTGCTTGTA+AGG | - | chr6_2:59286366-59286385 | Msa0921730:intron | 35.0% | |
| ! | TGAGTGCTTGTAAGGTTTTA+AGG | - | chr6_2:59286374-59286393 | Msa0921730:intron | 35.0% |
| TTAATGTGTGTTTGCTTCCA+CGG | - | chr6_2:59286513-59286532 | Msa0921730:intron | 35.0% | |
| CTACTTGAGAACATCCAAAT+AGG | - | chr6_2:59286686-59286705 | Msa0921730:intron | 35.0% | |
| AAGCAAGTAGAAAACAAGCA+TGG | - | chr6_2:59287040-59287059 | Msa0921730:intron | 35.0% | |
| TTTGCATCAGAACTTTGCAT+AGG | + | chr6_2:59287079-59287098 | None:intergenic | 35.0% | |
| TTGGATGGAAGAACAGATAA+AGG | + | chr6_2:59287229-59287248 | None:intergenic | 35.0% | |
| TTATCTGTTCTTCCATCCAA+AGG | - | chr6_2:59287229-59287248 | Msa0921730:intron | 35.0% | |
| TATGATATTGTGGAGCAATG+TGG | - | chr6_2:59287450-59287469 | Msa0921730:intron | 35.0% | |
| AGGAATTGTTCCAAATCCAA+TGG | - | chr6_2:59287511-59287530 | Msa0921730:intron | 35.0% | |
| TAAAATATGGTCAACTGAGC+AGG | + | chr6_2:59287544-59287563 | None:intergenic | 35.0% | |
| ! | GCTCAGTTGACCATATTTTA+TGG | - | chr6_2:59287544-59287563 | Msa0921730:intron | 35.0% |
| ! | CAGTTGACCATATTTTATGG+TGG | - | chr6_2:59287547-59287566 | Msa0921730:intron | 35.0% |
| GCAAAAAAAGTTACCTTCTC+AGG | + | chr6_2:59287601-59287620 | None:intergenic | 35.0% | |
| ! | TTATTTTCTGCAATCTGCGA+TGG | - | chr6_2:59287663-59287682 | Msa0921730:intron | 35.0% |
| ! | TATTTTCCATGACTAGGCTA+AGG | - | chr6_2:59287747-59287766 | Msa0921730:intron | 35.0% |
| ATCATGTTACTAGCTGGAAA+TGG | - | chr6_2:59287772-59287791 | Msa0921730:intron | 35.0% | |
| AACTTGCATGAGAAGTCATT+GGG | + | chr6_2:59288032-59288051 | None:intergenic | 35.0% | |
| AGATTCCAAATGGTTAGTAG+GGG | + | chr6_2:59288124-59288143 | None:intergenic | 35.0% | |
| GAGATTCCAAATGGTTAGTA+GGG | + | chr6_2:59288125-59288144 | None:intergenic | 35.0% | |
| CAACAATAGGAGATTCCAAA+TGG | + | chr6_2:59288134-59288153 | None:intergenic | 35.0% | |
| CTCGACCTCTATTAATTAAC+CGG | + | chr6_2:59288309-59288328 | None:intergenic | 35.0% | |
| !! | GTTTTTGAGCCTTGGATATT+AGG | - | chr6_2:59288566-59288585 | Msa0921730:intron | 35.0% |
| !! | AGTTTCTCCATTGATTTCTC+TGG | - | chr6_2:59288917-59288936 | Msa0921730:exon | 35.0% |
| ACTTGAACCAGAGAAATCAA+TGG | + | chr6_2:59288927-59288946 | None:intergenic | 35.0% | |
| CTTCTTAAAGGCAAATTGGT+GGG | + | chr6_2:59288959-59288978 | None:intergenic | 35.0% | |
| TCTTCTTAAAGGCAAATTGG+TGG | + | chr6_2:59288960-59288979 | None:intergenic | 35.0% | |
| ! | GCCTTTAAGAAGAACATGTA+TGG | - | chr6_2:59288967-59288986 | Msa0921730:five_prime_UTR | 35.0% |
| AGATCTAGCATGTTGTCATA+TGG | - | chr6_2:59289101-59289120 | Msa0921730:five_prime_UTR | 35.0% | |
| AAGTGTTTGGTTGTGGTGAA+TGG | + | chr6_2:59283063-59283082 | None:intergenic | 40.0% | |
| !! | GGTAGTCCATGGACTATTTT+TGG | + | chr6_2:59283212-59283231 | None:intergenic | 40.0% |
| TCTTCTTTCATGGTAGTCCA+TGG | + | chr6_2:59283223-59283242 | None:intergenic | 40.0% | |
| !! | GTTGGAAGCATCTTCTTTCA+TGG | + | chr6_2:59283233-59283252 | None:intergenic | 40.0% |
| TCCAACAAACCAAAAGACCA+AGG | - | chr6_2:59283247-59283266 | Msa0921730:intron | 40.0% | |
| !!! | ACCTTGGTCTTTTGGTTTGT+TGG | + | chr6_2:59283251-59283270 | None:intergenic | 40.0% |
| TGCACCAACACCTATTGTTA+TGG | - | chr6_2:59283331-59283350 | Msa0921730:intron | 40.0% | |
| GCACCAACACCTATTGTTAT+GGG | - | chr6_2:59283332-59283351 | Msa0921730:intron | 40.0% | |
| CACCAACACCTATTGTTATG+GGG | - | chr6_2:59283333-59283352 | Msa0921730:intron | 40.0% | |
| ATCCCCATAACAATAGGTGT+TGG | + | chr6_2:59283338-59283357 | None:intergenic | 40.0% | |
| ! | ATCAAGTGTCCTAAGAGCAT+TGG | - | chr6_2:59283583-59283602 | Msa0921730:CDS | 40.0% |
| ! | AGTTGATGTGTGAATGTGGT+AGG | - | chr6_2:59284048-59284067 | Msa0921730:CDS | 40.0% |
| GTTGATGTGTGAATGTGGTA+GGG | - | chr6_2:59284049-59284068 | Msa0921730:CDS | 40.0% | |
| CTTGTCAGTGTGTTGTAAGA+TGG | - | chr6_2:59284080-59284099 | Msa0921730:CDS | 40.0% | |
| TATCTAGGTAATAACTGGCC+AGG | + | chr6_2:59285597-59285616 | None:intergenic | 40.0% | |
| TGATGGGGTAGATGAAGTAT+AGG | - | chr6_2:59285812-59285831 | Msa0921730:intron | 40.0% | |
| TTTGATGCAGTTAGGAGTTC+AGG | - | chr6_2:59286074-59286093 | Msa0921730:intron | 40.0% | |
| !! | GCAGTGGTCGTTTTCAAATA+AGG | - | chr6_2:59286100-59286119 | Msa0921730:intron | 40.0% |
| GCACTCAATGTTCTTCAACA+GGG | + | chr6_2:59286361-59286380 | None:intergenic | 40.0% | |
| AGCACTCAATGTTCTTCAAC+AGG | + | chr6_2:59286362-59286381 | None:intergenic | 40.0% | |
| AGTTTGATTCCTCCTTGAGT+GGG | - | chr6_2:59286738-59286757 | Msa0921730:intron | 40.0% | |
| TGGAAGAACAGATAAAGGTG+TGG | + | chr6_2:59287224-59287243 | None:intergenic | 40.0% | |
| !! | GTTTTATTAGAAATGCGGGG+CGG | + | chr6_2:59287356-59287375 | None:intergenic | 40.0% |
| AGGTGTAGTACCATTGGATT+TGG | + | chr6_2:59287524-59287543 | None:intergenic | 40.0% | |
| AAGGCTATCATGTTACTAGC+TGG | - | chr6_2:59287766-59287785 | Msa0921730:intron | 40.0% | |
| TGAGAGGACTTTGCAATTGA+AGG | + | chr6_2:59287970-59287989 | None:intergenic | 40.0% | |
| GAACTTGCATGAGAAGTCAT+TGG | + | chr6_2:59288033-59288052 | None:intergenic | 40.0% | |
| TCATGCAAGTTCTTATCCCA+AGG | - | chr6_2:59288041-59288060 | Msa0921730:intron | 40.0% | |
| CATGCAAGTTCTTATCCCAA+GGG | - | chr6_2:59288042-59288061 | Msa0921730:intron | 40.0% | |
| AAATGCCCCTACTAACCATT+TGG | - | chr6_2:59288116-59288135 | Msa0921730:intron | 40.0% | |
| GGAGATTCCAAATGGTTAGT+AGG | + | chr6_2:59288126-59288145 | None:intergenic | 40.0% | |
| GCTACAGAAGTAGCAACAAT+AGG | + | chr6_2:59288147-59288166 | None:intergenic | 40.0% | |
| CCTGGTTGAATCACATTTGT+AGG | + | chr6_2:59288177-59288196 | None:intergenic | 40.0% | |
| CCTACAAATGTGATTCAACC+AGG | - | chr6_2:59288174-59288193 | Msa0921730:intron | 40.0% | |
| !! | TTTTGGAGAAGCGAAAGGAA+AGG | - | chr6_2:59288508-59288527 | Msa0921730:intron | 40.0% |
| TTGAATGTGTCACCTAGACA+CGG | - | chr6_2:59288619-59288638 | Msa0921730:intron | 40.0% | |
| CTAGGGCCATGTCATACTTA+TGG | - | chr6_2:59283986-59284005 | Msa0921730:CDS | 45.0% | |
| AAAACGTGCTCTTGGTTGTC+TGG | - | chr6_2:59284840-59284859 | Msa0921730:CDS | 45.0% | |
| CTAAGGTCTAACATGGGCAT+TGG | - | chr6_2:59285094-59285113 | Msa0921730:intron | 45.0% | |
| ATGACAAGCTGGTTGCAAAG+AGG | - | chr6_2:59285164-59285183 | Msa0921730:intron | 45.0% | |
| TGTTACAAGTCACCCTTTGG+TGG | + | chr6_2:59285485-59285504 | None:intergenic | 45.0% | |
| AGGTAATAACTGGCCAGGTA+CGG | + | chr6_2:59285592-59285611 | None:intergenic | 45.0% | |
| TTAGGAGTTCAGGAATGCAG+TGG | - | chr6_2:59286084-59286103 | Msa0921730:intron | 45.0% | |
| ATGGATCCAGTAGCTTCATC+TGG | - | chr6_2:59286191-59286210 | Msa0921730:intron | 45.0% | |
| ATCATTCTTGGGTGTGACAC+AGG | - | chr6_2:59286259-59286278 | Msa0921730:intron | 45.0% | |
| GGTGAGACTTGAGTTTGCAA+TGG | - | chr6_2:59286395-59286414 | Msa0921730:intron | 45.0% | |
| GAGTTTGATTCCTCCTTGAG+TGG | - | chr6_2:59286737-59286756 | Msa0921730:intron | 45.0% | |
| ! | TATATGGTTGGTCCCACTCA+AGG | + | chr6_2:59286753-59286772 | None:intergenic | 45.0% |
| ! | AACAGATAAAGGTGTGGCAG+AGG | + | chr6_2:59287218-59287237 | None:intergenic | 45.0% |
| TAAGTCAGTAGAGCCAGCTA+TGG | + | chr6_2:59287257-59287276 | None:intergenic | 45.0% | |
| !! | TAGCTGGCTCTACTGACTTA+AGG | - | chr6_2:59287257-59287276 | Msa0921730:intron | 45.0% |
| AATGCGGGGCGGAAAAAAAT+TGG | + | chr6_2:59287345-59287364 | None:intergenic | 45.0% | |
| TATTGTGGAGCAATGTGGAG+TGG | - | chr6_2:59287455-59287474 | Msa0921730:intron | 45.0% | |
| TGATGACATCTCTCCTGAGA+AGG | - | chr6_2:59287585-59287604 | Msa0921730:intron | 45.0% | |
| ! | TGATAGCCTTAGCCTAGTCA+TGG | + | chr6_2:59287756-59287775 | None:intergenic | 45.0% |
| CTTGGCAATGGTGAGAGATA+GGG | + | chr6_2:59287859-59287878 | None:intergenic | 45.0% | |
| CATGAGAGGTCATTGGAAGA+GGG | + | chr6_2:59287882-59287901 | None:intergenic | 45.0% | |
| TCATGCAAGTGCTCAACCAA+GGG | - | chr6_2:59287897-59287916 | Msa0921730:intron | 45.0% | |
| ATGGGATAGGTCATTGTGAG+AGG | + | chr6_2:59287986-59288005 | None:intergenic | 45.0% | |
| ACTTGGCAAAGGTGAGAGAT+GGG | + | chr6_2:59288004-59288023 | None:intergenic | 45.0% | |
| AACTTGGCAAAGGTGAGAGA+TGG | + | chr6_2:59288005-59288024 | None:intergenic | 45.0% | |
| ATTGGGAGAGAACTTGGCAA+AGG | + | chr6_2:59288015-59288034 | None:intergenic | 45.0% | |
| GAAGTCATTGGGAGAGAACT+TGG | + | chr6_2:59288021-59288040 | None:intergenic | 45.0% | |
| CAAGTTCTTATCCCAAGGGA+GGG | - | chr6_2:59288046-59288065 | Msa0921730:intron | 45.0% | |
| !! | TGGTTAGTAGGGGCATTTGA+AGG | + | chr6_2:59288114-59288133 | None:intergenic | 45.0% |
| TTTATGGTGAAATCGCACGC+CGG | - | chr6_2:59288287-59288306 | Msa0921730:intron | 45.0% | |
| ! | GCACGCCGGTTAATTAATAG+AGG | - | chr6_2:59288301-59288320 | Msa0921730:intron | 45.0% |
| !! | TCGGTTTTTGGAGAAGCGAA+AGG | - | chr6_2:59288503-59288522 | Msa0921730:intron | 45.0% |
| AAATCACCTGAATGCAGCAC+TGG | - | chr6_2:59288881-59288900 | Msa0921730:CDS | 45.0% | |
| CTTAAAGGCAAATTGGTGGG+TGG | + | chr6_2:59288956-59288975 | None:intergenic | 45.0% | |
| !!! | TGTTTTTTTATATATATATT+TGG | - | chr6_2:59283427-59283446 | Msa0921730:intron | 5.0% |
| !!! | GTTTTTTTATATATATATTT+GGG | - | chr6_2:59283428-59283447 | Msa0921730:intron | 5.0% |
| !! | TATATAAATATTAAATGAAA+TGG | + | chr6_2:59284658-59284677 | None:intergenic | 5.0% |
| !!! | TTTTTATTTATTTATTTTGA+TGG | - | chr6_2:59285795-59285814 | Msa0921730:intron | 5.0% |
| !!! | TTTTATTTATTTATTTTGAT+GGG | - | chr6_2:59285796-59285815 | Msa0921730:intron | 5.0% |
| CCAGCTATGGAACCTTTGGA+TGG | + | chr6_2:59287244-59287263 | None:intergenic | 50.0% | |
| CCATCCAAAGGTTCCATAGC+TGG | - | chr6_2:59287241-59287260 | Msa0921730:intron | 50.0% | |
| AGAGCCAGCTATGGAACCTT+TGG | + | chr6_2:59287248-59287267 | None:intergenic | 50.0% | |
| CTGAGCAGGTGTAGTACCAT+TGG | + | chr6_2:59287530-59287549 | None:intergenic | 50.0% | |
| GCAATGGTGAGAGATAGGGT+TGG | + | chr6_2:59287855-59287874 | None:intergenic | 50.0% | |
| GCTTGGCAATGGTGAGAGAT+AGG | + | chr6_2:59287860-59287879 | None:intergenic | 50.0% | |
| ATTGGAAGAGGGCTTGGCAA+TGG | + | chr6_2:59287871-59287890 | None:intergenic | 50.0% | |
| GCATGAGAGGTCATTGGAAG+AGG | + | chr6_2:59287883-59287902 | None:intergenic | 50.0% | |
| GCACTTGCATGAGAGGTCAT+TGG | + | chr6_2:59287889-59287908 | None:intergenic | 50.0% | |
| TGGTTGAGCACTTGCATGAG+AGG | + | chr6_2:59287896-59287915 | None:intergenic | 50.0% | |
| CTCATGCAAGTGCTCAACCA+AGG | - | chr6_2:59287896-59287915 | Msa0921730:intron | 50.0% | |
| CATGCAAGTGCTCAACCAAG+GGG | - | chr6_2:59287898-59287917 | Msa0921730:intron | 50.0% | |
| ! | TTGCTACTTGATCCTCCCCT+TGG | + | chr6_2:59287916-59287935 | None:intergenic | 50.0% |
| GCAAAGGTGAGAGATGGGAT+AGG | + | chr6_2:59287999-59288018 | None:intergenic | 50.0% | |
| GCAAGTTCTTATCCCAAGGG+AGG | - | chr6_2:59288045-59288064 | Msa0921730:intron | 50.0% | |
| ! | TTGCTACTTGACCCTCCCTT+GGG | + | chr6_2:59288060-59288079 | None:intergenic | 50.0% |
| ! | ATTGCTACTTGACCCTCCCT+TGG | + | chr6_2:59288061-59288080 | None:intergenic | 50.0% |
| !!! | AGCATCGCTGACTCGGTTTT+TGG | - | chr6_2:59288491-59288510 | Msa0921730:intron | 50.0% |
| ATTGACGAGTCTCCGTGTCT+AGG | + | chr6_2:59288634-59288653 | None:intergenic | 50.0% | |
| TCTGATCCAGTGCTGCATTC+AGG | + | chr6_2:59288890-59288909 | None:intergenic | 50.0% | |
| ACGTGCTCTTGGTTGTCTGG+TGG | - | chr6_2:59284843-59284862 | Msa0921730:CDS | 55.0% | |
| ! | ATGGTTGGTCCCACTCAAGG+AGG | + | chr6_2:59286750-59286769 | None:intergenic | 55.0% |
| GAGGTCATTGGAAGAGGGCT+TGG | + | chr6_2:59287877-59287896 | None:intergenic | 55.0% | |
| ! | AGCGATGCTTTTCGCGCTTG+AGG | + | chr6_2:59288480-59288499 | None:intergenic | 55.0% |
| !! | CGCGAAAAGCATCGCTGACT+CGG | - | chr6_2:59288484-59288503 | Msa0921730:intron | 55.0% |
| GCAAGTGCTCAACCAAGGGG+AGG | - | chr6_2:59287901-59287920 | Msa0921730:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 59282900 | 59289203 | 59282900 | ID=Msa0921730;Name=Msa0921730 |
| chr6_2 | mRNA | 59282900 | 59289203 | 59282900 | ID=Msa0921730-mRNA-1;Parent=Msa0921730;Name=Msa0921730-mRNA-1;_AED=0.11;_eAED=0.11;_QI=281|0.83|0.85|1|0.83|1|7|200|418 |
| chr6_2 | exon | 59282900 | 59283256 | 59282900 | ID=Msa0921730-mRNA-1:exon:8941;Parent=Msa0921730-mRNA-1 |
| chr6_2 | exon | 59283574 | 59283634 | 59283574 | ID=Msa0921730-mRNA-1:exon:8940;Parent=Msa0921730-mRNA-1 |
| chr6_2 | exon | 59283908 | 59284340 | 59283908 | ID=Msa0921730-mRNA-1:exon:8939;Parent=Msa0921730-mRNA-1 |
| chr6_2 | exon | 59284530 | 59284596 | 59284530 | ID=Msa0921730-mRNA-1:exon:8938;Parent=Msa0921730-mRNA-1 |
| chr6_2 | exon | 59284825 | 59285078 | 59284825 | ID=Msa0921730-mRNA-1:exon:8937;Parent=Msa0921730-mRNA-1 |
| chr6_2 | exon | 59285823 | 59286019 | 59285823 | ID=Msa0921730-mRNA-1:exon:8936;Parent=Msa0921730-mRNA-1 |
| chr6_2 | exon | 59288835 | 59289203 | 59288835 | ID=Msa0921730-mRNA-1:exon:8935;Parent=Msa0921730-mRNA-1 |
| chr6_2 | five_prime_UTR | 59288923 | 59289203 | 59288923 | ID=Msa0921730-mRNA-1:five_prime_utr;Parent=Msa0921730-mRNA-1 |
| chr6_2 | CDS | 59288835 | 59288922 | 59288835 | ID=Msa0921730-mRNA-1:cds;Parent=Msa0921730-mRNA-1 |
| chr6_2 | CDS | 59285823 | 59286019 | 59285823 | ID=Msa0921730-mRNA-1:cds;Parent=Msa0921730-mRNA-1 |
| chr6_2 | CDS | 59284825 | 59285078 | 59284825 | ID=Msa0921730-mRNA-1:cds;Parent=Msa0921730-mRNA-1 |
| chr6_2 | CDS | 59284530 | 59284596 | 59284530 | ID=Msa0921730-mRNA-1:cds;Parent=Msa0921730-mRNA-1 |
| chr6_2 | CDS | 59283908 | 59284340 | 59283908 | ID=Msa0921730-mRNA-1:cds;Parent=Msa0921730-mRNA-1 |
| chr6_2 | CDS | 59283574 | 59283634 | 59283574 | ID=Msa0921730-mRNA-1:cds;Parent=Msa0921730-mRNA-1 |
| chr6_2 | CDS | 59283100 | 59283256 | 59283100 | ID=Msa0921730-mRNA-1:cds;Parent=Msa0921730-mRNA-1 |
| chr6_2 | three_prime_UTR | 59282900 | 59283099 | 59282900 | ID=Msa0921730-mRNA-1:three_prime_utr;Parent=Msa0921730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
