Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926070 | XP_003620733.2 | 97.007 | 401 | 11 | 1 | 1 | 401 | 1 | 400 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926070 | sp|Q9LZ00|MED4_ARATH | 56.872 | 422 | 130 | 9 | 1 | 384 | 1 | 408 | 1.30e-128 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0901160 | Msa0926070 | 0.907393 | 5.319588e-81 | -8.615850e-47 |
| Msa0926070 | Msa0966720 | 0.879216 | 1.493879e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926070 | MtrunA17_Chr6g0487271 | 97.007 | 401 | 11 | 1 | 1 | 401 | 1 | 400 | 0.0 | 766 |
| Msa0926070 | MtrunA17_Chr8g0371901 | 82.946 | 387 | 58 | 5 | 1 | 383 | 1 | 383 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926070 | AT5G02850.1 | 56.872 | 422 | 130 | 9 | 1 | 384 | 1 | 408 | 1.32e-129 | 380 |
Find 135 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTCGCACCAGTTAATT+TGG | 0.177926 | 6_2:+69644837 | Msa0926070:CDS |
| CACCCAGGTGGTGGCTTAAT+TGG | 0.216315 | 6_2:-69644712 | None:intergenic |
| GCCTGCCCTGCTCCAAATTC+TGG | 0.232745 | 6_2:-69644418 | None:intergenic |
| TCTTTGGTTTCAACCGATTT+TGG | 0.233348 | 6_2:-69644532 | None:intergenic |
| CTCAGCATCTTTGAGTTTGT+TGG | 0.245184 | 6_2:-69644215 | None:intergenic |
| CGGAAACAGCTTCAAACATT+TGG | 0.246319 | 6_2:-69644105 | None:intergenic |
| GGTGCGACTTGAATAATTTC+TGG | 0.283186 | 6_2:-69644826 | None:intergenic |
| AGCTTTGGAGGGGTAGGGTT+TGG | 0.285527 | 6_2:-69643788 | None:intergenic |
| GTCTGAGGAGGAGGGAGCTT+TGG | 0.301684 | 6_2:-69643803 | None:intergenic |
| ATCTCCTAATTTCAATCTCT+TGG | 0.306619 | 6_2:-69644287 | None:intergenic |
| TGAATAATTTCTGGCAGCTT+TGG | 0.318616 | 6_2:-69644817 | None:intergenic |
| CCGGCCGGAACAGTAAAATT+TGG | 0.323594 | 6_2:-69644649 | None:intergenic |
| AGCAGGGCAGGCCCCTCTCC+GGG | 0.330122 | 6_2:+69644429 | Msa0926070:CDS |
| AGGATTTCTTTGGTGGTAGA+AGG | 0.339370 | 6_2:-69644058 | None:intergenic |
| TTTGGAATCAACGGTGAGTT+AGG | 0.340306 | 6_2:-69643770 | None:intergenic |
| AAAACCAAGAGATTGAAATT+AGG | 0.343447 | 6_2:+69644283 | Msa0926070:CDS |
| GCAAATTTGCCTGGAATTCA+AGG | 0.344882 | 6_2:+69644616 | Msa0926070:CDS |
| GCACCAGTTAATTTGGATCT+TGG | 0.347400 | 6_2:+69644844 | Msa0926070:CDS |
| TCTCCAAGATCCAAATTAAC+TGG | 0.347464 | 6_2:-69644847 | None:intergenic |
| GGAGGGAGCTTTGGAGGGGT+AGG | 0.360592 | 6_2:-69643794 | None:intergenic |
| ATTTGCTCGTCTTGCGGTGC+AGG | 0.361373 | 6_2:-69644463 | None:intergenic |
| GGCAATTGTACAGGCATTCC+AGG | 0.364622 | 6_2:-69644679 | None:intergenic |
| CTTCAAACATTTGGGTTTGA+AGG | 0.366665 | 6_2:-69644096 | None:intergenic |
| GAGCAGGGCAGGCCCCTCTC+CGG | 0.368053 | 6_2:+69644428 | Msa0926070:CDS |
| AGGCAAATTTGCAAGTGAAT+TGG | 0.374413 | 6_2:-69644605 | None:intergenic |
| ACGGTGAGTTAGGGTTTGTT+AGG | 0.376902 | 6_2:-69643760 | None:intergenic |
| GAGGGAGCTTTGGAGGGGTA+GGG | 0.379909 | 6_2:-69643793 | None:intergenic |
| ATCAAGAACTTCCTGGAGTT+CGG | 0.381691 | 6_2:-69644125 | None:intergenic |
| GGAAACAGCTTCAAACATTT+GGG | 0.383652 | 6_2:-69644104 | None:intergenic |
| GAAAAGTGAAAGGATTTCTT+TGG | 0.383698 | 6_2:-69644068 | None:intergenic |
| ATCACCCAACAAGTCCCTTT+GGG | 0.404501 | 6_2:+69643955 | Msa0926070:CDS |
| AATTCACTTGCAAATTTGCC+TGG | 0.406267 | 6_2:+69644607 | Msa0926070:CDS |
| GGTAGCAGTCCTTGAATTCC+AGG | 0.407829 | 6_2:-69644625 | None:intergenic |
| GGATATTGGATTACCAAAAT+CGG | 0.408119 | 6_2:+69644519 | Msa0926070:CDS |
| TGATGGGTAGTCTGAGGAGG+AGG | 0.415458 | 6_2:-69643812 | None:intergenic |
| TTGCCAAATGGCGGTCTTGA+TGG | 0.418201 | 6_2:-69643835 | None:intergenic |
| GAGAGAGTAGAGCAGGAGAA+GGG | 0.422762 | 6_2:-69643859 | None:intergenic |
| TATCACCCAACAAGTCCCTT+TGG | 0.427973 | 6_2:+69643954 | Msa0926070:CDS |
| GTTCCGGCCGGTTGGAAGCC+TGG | 0.429451 | 6_2:+69644661 | Msa0926070:CDS |
| AACTGTTGTTCCTCAATCCT+TGG | 0.432983 | 6_2:-69644775 | None:intergenic |
| TGTTCCTCAATCCTTGGTAC+TGG | 0.434205 | 6_2:-69644769 | None:intergenic |
| CCTGGTTTCCACCCAGGTGG+TGG | 0.435107 | 6_2:-69644721 | None:intergenic |
| GGCTTAATTGGTATATCAAT+AGG | 0.438106 | 6_2:-69644700 | None:intergenic |
| GGGAGAAGAGAGAGTAGAGC+AGG | 0.440905 | 6_2:-69643866 | None:intergenic |
| GCCAGAATTTGGAGCAGGGC+AGG | 0.446799 | 6_2:+69644417 | Msa0926070:CDS |
| ACTAACCCAAAGGGACTTGT+TGG | 0.448740 | 6_2:-69643960 | None:intergenic |
| TTCAAAGAGCTTGGTAGATA+AGG | 0.454869 | 6_2:-69643930 | None:intergenic |
| ACAAGCACTTCTTCAGCAAA+TGG | 0.457716 | 6_2:+69643904 | Msa0926070:CDS |
| ACCAGGGGATCCTGTGGCAT+TGG | 0.462353 | 6_2:+69644738 | Msa0926070:CDS |
| TGAAGAAGTGCTTGTGCTCT+AGG | 0.469628 | 6_2:-69643896 | None:intergenic |
| AGAGAGAGTAGAGCAGGAGA+AGG | 0.470176 | 6_2:-69643860 | None:intergenic |
| CCACCACCTGGGTGGAAACC+AGG | 0.470533 | 6_2:+69644721 | Msa0926070:CDS |
| AAACATTTGGGTTTGAAGGT+TGG | 0.480073 | 6_2:-69644092 | None:intergenic |
| TTTGTTAGGCCTAGCCTAGC+AGG | 0.483942 | 6_2:-69643746 | None:intergenic |
| TGAGGAGGAGGGAGCTTTGG+AGG | 0.484585 | 6_2:-69643800 | None:intergenic |
| GCACCGCCAGAATTTGGAGC+AGG | 0.486070 | 6_2:+69644412 | Msa0926070:CDS |
| CAGGAGAAGGGGTTGCCAAA+TGG | 0.490997 | 6_2:-69643847 | None:intergenic |
| TCACCATCAAGACCGCCATT+TGG | 0.491419 | 6_2:+69643832 | Msa0926070:CDS |
| CCTTGTGAAGAAAGGAAGGT+TGG | 0.493462 | 6_2:-69644001 | None:intergenic |
| GTGGAAGTGCACCCCGGAGA+GGG | 0.493664 | 6_2:-69644441 | None:intergenic |
| TGAAGCTGTTTCCGAACTCC+AGG | 0.494808 | 6_2:+69644114 | Msa0926070:CDS |
| AAGTGAAAGGATTTCTTTGG+TGG | 0.499520 | 6_2:-69644065 | None:intergenic |
| AGAGAGTAGAGCAGGAGAAG+GGG | 0.504201 | 6_2:-69643858 | None:intergenic |
| CTTGTGAAGAAAGGAAGGTT+GGG | 0.505188 | 6_2:-69644000 | None:intergenic |
| TCCAATGCCACAGGATCCCC+TGG | 0.507062 | 6_2:-69644739 | None:intergenic |
| AGGCATTCCAGGCTTCCAAC+CGG | 0.512872 | 6_2:-69644668 | None:intergenic |
| GAAGTGCTTGTGCTCTAGGA+AGG | 0.517707 | 6_2:-69643892 | None:intergenic |
| GCAAGTGAATTGGTATCCAC+AGG | 0.521071 | 6_2:-69644595 | None:intergenic |
| CCAACCTTCCTTTCTTCACA+AGG | 0.521794 | 6_2:+69644001 | Msa0926070:CDS |
| TGCTCGTCTTGCGGTGCAGG+TGG | 0.522400 | 6_2:-69644460 | None:intergenic |
| CTAACCCAAAGGGACTTGTT+GGG | 0.527508 | 6_2:-69643959 | None:intergenic |
| TGCCCTGCTCCAAATTCTGG+CGG | 0.529365 | 6_2:-69644415 | None:intergenic |
| TTGGAATCAACGGTGAGTTA+GGG | 0.530123 | 6_2:-69643769 | None:intergenic |
| TCAATCTTCATCATCAGTGC+TGG | 0.532755 | 6_2:-69644902 | None:intergenic |
| GAAGGTTGGTGAAAAGTGAA+AGG | 0.533645 | 6_2:-69644078 | None:intergenic |
| GGGTGATACTTCAAAGAGCT+TGG | 0.537679 | 6_2:-69643939 | None:intergenic |
| TCCACAGGCTGTAGAGGTGG+AGG | 0.539725 | 6_2:-69644580 | None:intergenic |
| GGATCCCCTGGTTTCCACCC+AGG | 0.540867 | 6_2:-69644727 | None:intergenic |
| ATTTCTGGCAGCTTTGGCTG+AGG | 0.545599 | 6_2:-69644811 | None:intergenic |
| GCTCTCATTTGCTCGTCTTG+CGG | 0.546241 | 6_2:-69644469 | None:intergenic |
| CCTCAATCCTTGGTACTGGA+AGG | 0.551589 | 6_2:-69644765 | None:intergenic |
| ATACCAATTAAGCCACCACC+TGG | 0.555177 | 6_2:+69644709 | Msa0926070:CDS |
| GTGGTTGGCCTTGTGAAGAA+AGG | 0.558899 | 6_2:-69644009 | None:intergenic |
| CACCACCTGGGTGGAAACCA+GGG | 0.560314 | 6_2:+69644722 | Msa0926070:CDS |
| GCTTGTGCTCTAGGAAGGGG+TGG | 0.564547 | 6_2:-69643887 | None:intergenic |
| CAGCTTCAGCTGAGACGATA+CGG | 0.565245 | 6_2:-69644344 | None:intergenic |
| AAGAGATTGAAATTAGGAGA+TGG | 0.566608 | 6_2:+69644289 | Msa0926070:CDS |
| CACCGCCAGAATTTGGAGCA+GGG | 0.567068 | 6_2:+69644413 | Msa0926070:CDS |
| TTGGTATCCACAGGCTGTAG+AGG | 0.567683 | 6_2:-69644586 | None:intergenic |
| AGTGCTTGTGCTCTAGGAAG+GGG | 0.571087 | 6_2:-69643890 | None:intergenic |
| CTTTGGGTTAGTGCATTCCG+TGG | 0.572353 | 6_2:+69643971 | Msa0926070:CDS |
| ACGGAATGCACTAACCCAAA+GGG | 0.574073 | 6_2:-69643969 | None:intergenic |
| CACGGAATGCACTAACCCAA+AGG | 0.576730 | 6_2:-69643970 | None:intergenic |
| GTGCAGGTGGAAGTGCACCC+CGG | 0.578942 | 6_2:-69644447 | None:intergenic |
| ATTCCAGGCTTCCAACCGGC+CGG | 0.578994 | 6_2:-69644664 | None:intergenic |
| AACCAAAGAGAAAACAATTG+AGG | 0.581394 | 6_2:+69644546 | Msa0926070:CDS |
| GATGGGTAGTCTGAGGAGGA+GGG | 0.582639 | 6_2:-69643811 | None:intergenic |
| CCTTCCAGTACCAAGGATTG+AGG | 0.583142 | 6_2:+69644765 | Msa0926070:CDS |
| TGGAAGTGCACCCCGGAGAG+GGG | 0.583218 | 6_2:-69644440 | None:intergenic |
| TCCCCTGGTTTCCACCCAGG+TGG | 0.584198 | 6_2:-69644724 | None:intergenic |
| AAGTGCTTGTGCTCTAGGAA+GGG | 0.584261 | 6_2:-69643891 | None:intergenic |
| GCCGGAACAGTAAAATTTGG+AGG | 0.585314 | 6_2:-69644646 | None:intergenic |
| GGGGTAGGGTTTGGAATCAA+CGG | 0.586537 | 6_2:-69643779 | None:intergenic |
| ATATCAATAGGCAATTGTAC+AGG | 0.586960 | 6_2:-69644688 | None:intergenic |
| GTACAGTCACCTGCTAGGCT+AGG | 0.587842 | 6_2:+69643737 | Msa0926070:CDS |
| CTCAATCCTTGGTACTGGAA+GGG | 0.589075 | 6_2:-69644764 | None:intergenic |
| GGAAGGGAGTCCAATGCCAC+AGG | 0.589132 | 6_2:-69644748 | None:intergenic |
| GTATCCACAGGCTGTAGAGG+TGG | 0.589928 | 6_2:-69644583 | None:intergenic |
| AATGGCGGTCTTGATGGTGA+TGG | 0.591018 | 6_2:-69643829 | None:intergenic |
| GCGATGCAGAAGAACGTGGT+TGG | 0.591190 | 6_2:-69644024 | None:intergenic |
| GTGGAAACCAGGGGATCCTG+TGG | 0.596117 | 6_2:+69644732 | Msa0926070:CDS |
| AGCTTTGGCTGAGGAACATG+AGG | 0.596605 | 6_2:-69644802 | None:intergenic |
| GCAGGGCAGGCCCCTCTCCG+GGG | 0.600577 | 6_2:+69644430 | Msa0926070:CDS |
| GAGGAGGAGGGAGCTTTGGA+GGG | 0.602240 | 6_2:-69643799 | None:intergenic |
| ACAAACTCAAAGATGCTGAG+AGG | 0.603103 | 6_2:+69644218 | Msa0926070:CDS |
| GCCTCCACCTCTACAGCCTG+TGG | 0.606957 | 6_2:+69644579 | Msa0926070:CDS |
| CAAACTCAAAGATGCTGAGA+GGG | 0.610630 | 6_2:+69644219 | Msa0926070:CDS |
| TGGACTCCCTTCCAGTACCA+AGG | 0.613510 | 6_2:+69644758 | Msa0926070:CDS |
| ACCACCTGGGTGGAAACCAG+GGG | 0.616693 | 6_2:+69644723 | Msa0926070:CDS |
| GGTGGAAGTGCACCCCGGAG+AGG | 0.620003 | 6_2:-69644442 | None:intergenic |
| AGGAGGAGGGAGCTTTGGAG+GGG | 0.620746 | 6_2:-69643798 | None:intergenic |
| GGAAGGTTGGGAGTGATCCA+CGG | 0.622197 | 6_2:-69643988 | None:intergenic |
| GAGAAGGGGTTGCCAAATGG+CGG | 0.622502 | 6_2:-69643844 | None:intergenic |
| TGGTGATGGGTAGTCTGAGG+AGG | 0.625548 | 6_2:-69643815 | None:intergenic |
| ATGGCGGTCTTGATGGTGAT+GGG | 0.626326 | 6_2:-69643828 | None:intergenic |
| TAGCAGGTGACTGTACAACT+TGG | 0.627325 | 6_2:-69643730 | None:intergenic |
| AAGTTGTACAGTCACCTGCT+AGG | 0.628027 | 6_2:+69643732 | Msa0926070:CDS |
| CTTGTGCTCTAGGAAGGGGT+GGG | 0.628225 | 6_2:-69643886 | None:intergenic |
| TTGGCCTTGTGAAGAAAGGA+AGG | 0.645978 | 6_2:-69644005 | None:intergenic |
| CAATTAAGCCACCACCTGGG+TGG | 0.660310 | 6_2:+69644713 | Msa0926070:CDS |
| TGATGGTGATGGGTAGTCTG+AGG | 0.664895 | 6_2:-69643818 | None:intergenic |
| TACCAATTAAGCCACCACCT+GGG | 0.694068 | 6_2:+69644710 | Msa0926070:CDS |
| TCGAGCGATGCAGAAGAACG+TGG | 0.694080 | 6_2:-69644028 | None:intergenic |
| GCTTTGGCTGAGGAACATGA+GGG | 0.732836 | 6_2:-69644801 | None:intergenic |
| TGCTAAGCAAAAGATCGACG+AGG | 0.767137 | 6_2:+69644156 | Msa0926070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAACCAAGAGATTGAAATT+AGG | + | chr6_2:69644283-69644302 | Msa0926070:CDS | 25.0% |
| !! | GTTATATAATTTTGCAGATC+TGG | + | chr6_2:69644498-69644517 | Msa0926070:CDS | 25.0% |
| ! | AAAACCAAGAGATTGAAATT+AGG | + | chr6_2:69644283-69644302 | Msa0926070:CDS | 25.0% |
| !! | GTTATATAATTTTGCAGATC+TGG | + | chr6_2:69644498-69644517 | Msa0926070:CDS | 25.0% |
| GAAAAGTGAAAGGATTTCTT+TGG | - | chr6_2:69644071-69644090 | None:intergenic | 30.0% | |
| ATCTCCTAATTTCAATCTCT+TGG | - | chr6_2:69644290-69644309 | None:intergenic | 30.0% | |
| AAGAGATTGAAATTAGGAGA+TGG | + | chr6_2:69644289-69644308 | Msa0926070:CDS | 30.0% | |
| ! | AATTTTGCAGATCTGGATAT+TGG | + | chr6_2:69644505-69644524 | Msa0926070:CDS | 30.0% |
| GGATATTGGATTACCAAAAT+CGG | + | chr6_2:69644519-69644538 | Msa0926070:CDS | 30.0% | |
| AACCAAAGAGAAAACAATTG+AGG | + | chr6_2:69644546-69644565 | Msa0926070:CDS | 30.0% | |
| ATATCAATAGGCAATTGTAC+AGG | - | chr6_2:69644691-69644710 | None:intergenic | 30.0% | |
| GGCTTAATTGGTATATCAAT+AGG | - | chr6_2:69644703-69644722 | None:intergenic | 30.0% | |
| GAAAAGTGAAAGGATTTCTT+TGG | - | chr6_2:69644071-69644090 | None:intergenic | 30.0% | |
| ATCTCCTAATTTCAATCTCT+TGG | - | chr6_2:69644290-69644309 | None:intergenic | 30.0% | |
| AAGAGATTGAAATTAGGAGA+TGG | + | chr6_2:69644289-69644308 | Msa0926070:CDS | 30.0% | |
| ! | AATTTTGCAGATCTGGATAT+TGG | + | chr6_2:69644505-69644524 | Msa0926070:CDS | 30.0% |
| GGATATTGGATTACCAAAAT+CGG | + | chr6_2:69644519-69644538 | Msa0926070:CDS | 30.0% | |
| AACCAAAGAGAAAACAATTG+AGG | + | chr6_2:69644546-69644565 | Msa0926070:CDS | 30.0% | |
| ATATCAATAGGCAATTGTAC+AGG | - | chr6_2:69644691-69644710 | None:intergenic | 30.0% | |
| GGCTTAATTGGTATATCAAT+AGG | - | chr6_2:69644703-69644722 | None:intergenic | 30.0% | |
| TTCAAAGAGCTTGGTAGATA+AGG | - | chr6_2:69643933-69643952 | None:intergenic | 35.0% | |
| AAGTGAAAGGATTTCTTTGG+TGG | - | chr6_2:69644068-69644087 | None:intergenic | 35.0% | |
| ! | AAACATTTGGGTTTGAAGGT+TGG | - | chr6_2:69644095-69644114 | None:intergenic | 35.0% |
| ! | CTTCAAACATTTGGGTTTGA+AGG | - | chr6_2:69644099-69644118 | None:intergenic | 35.0% |
| GGAAACAGCTTCAAACATTT+GGG | - | chr6_2:69644107-69644126 | None:intergenic | 35.0% | |
| ! | CTTTTTGATCAAGAACTTCC+TGG | - | chr6_2:69644135-69644154 | None:intergenic | 35.0% |
| !! | TCTTTGGTTTCAACCGATTT+TGG | - | chr6_2:69644535-69644554 | None:intergenic | 35.0% |
| ! | AGCCTCAATTGTTTTCTCTT+TGG | - | chr6_2:69644551-69644570 | None:intergenic | 35.0% |
| AGGCAAATTTGCAAGTGAAT+TGG | - | chr6_2:69644608-69644627 | None:intergenic | 35.0% | |
| AATTCACTTGCAAATTTGCC+TGG | + | chr6_2:69644607-69644626 | Msa0926070:CDS | 35.0% | |
| ! | ACCTCCAAATTTTACTGTTC+CGG | + | chr6_2:69644645-69644664 | Msa0926070:CDS | 35.0% |
| !! | TGAATAATTTCTGGCAGCTT+TGG | - | chr6_2:69644820-69644839 | None:intergenic | 35.0% |
| TCTCCAAGATCCAAATTAAC+TGG | - | chr6_2:69644850-69644869 | None:intergenic | 35.0% | |
| TTCAAAGAGCTTGGTAGATA+AGG | - | chr6_2:69643933-69643952 | None:intergenic | 35.0% | |
| AAGTGAAAGGATTTCTTTGG+TGG | - | chr6_2:69644068-69644087 | None:intergenic | 35.0% | |
| ! | AAACATTTGGGTTTGAAGGT+TGG | - | chr6_2:69644095-69644114 | None:intergenic | 35.0% |
| ! | CTTCAAACATTTGGGTTTGA+AGG | - | chr6_2:69644099-69644118 | None:intergenic | 35.0% |
| GGAAACAGCTTCAAACATTT+GGG | - | chr6_2:69644107-69644126 | None:intergenic | 35.0% | |
| ! | CTTTTTGATCAAGAACTTCC+TGG | - | chr6_2:69644135-69644154 | None:intergenic | 35.0% |
| !! | TCTTTGGTTTCAACCGATTT+TGG | - | chr6_2:69644535-69644554 | None:intergenic | 35.0% |
| ! | AGCCTCAATTGTTTTCTCTT+TGG | - | chr6_2:69644551-69644570 | None:intergenic | 35.0% |
| AGGCAAATTTGCAAGTGAAT+TGG | - | chr6_2:69644608-69644627 | None:intergenic | 35.0% | |
| AATTCACTTGCAAATTTGCC+TGG | + | chr6_2:69644607-69644626 | Msa0926070:CDS | 35.0% | |
| ! | ACCTCCAAATTTTACTGTTC+CGG | + | chr6_2:69644645-69644664 | Msa0926070:CDS | 35.0% |
| !! | TGAATAATTTCTGGCAGCTT+TGG | - | chr6_2:69644820-69644839 | None:intergenic | 35.0% |
| TCTCCAAGATCCAAATTAAC+TGG | - | chr6_2:69644850-69644869 | None:intergenic | 35.0% | |
| TTGGAATCAACGGTGAGTTA+GGG | - | chr6_2:69643772-69643791 | None:intergenic | 40.0% | |
| ! | TTTGGAATCAACGGTGAGTT+AGG | - | chr6_2:69643773-69643792 | None:intergenic | 40.0% |
| ACAAGCACTTCTTCAGCAAA+TGG | + | chr6_2:69643904-69643923 | Msa0926070:CDS | 40.0% | |
| CTTGTGAAGAAAGGAAGGTT+GGG | - | chr6_2:69644003-69644022 | None:intergenic | 40.0% | |
| ! | AGGATTTCTTTGGTGGTAGA+AGG | - | chr6_2:69644061-69644080 | None:intergenic | 40.0% |
| !! | GAAGGTTGGTGAAAAGTGAA+AGG | - | chr6_2:69644081-69644100 | None:intergenic | 40.0% |
| CGGAAACAGCTTCAAACATT+TGG | - | chr6_2:69644108-69644127 | None:intergenic | 40.0% | |
| ATCAAGAACTTCCTGGAGTT+CGG | - | chr6_2:69644128-69644147 | None:intergenic | 40.0% | |
| ! | CTCAGCATCTTTGAGTTTGT+TGG | - | chr6_2:69644218-69644237 | None:intergenic | 40.0% |
| ACAAACTCAAAGATGCTGAG+AGG | + | chr6_2:69644218-69644237 | Msa0926070:CDS | 40.0% | |
| CAAACTCAAAGATGCTGAGA+GGG | + | chr6_2:69644219-69644238 | Msa0926070:CDS | 40.0% | |
| GCAAATTTGCCTGGAATTCA+AGG | + | chr6_2:69644616-69644635 | Msa0926070:CDS | 40.0% | |
| AACTGTTGTTCCTCAATCCT+TGG | - | chr6_2:69644778-69644797 | None:intergenic | 40.0% | |
| GGTGCGACTTGAATAATTTC+TGG | - | chr6_2:69644829-69644848 | None:intergenic | 40.0% | |
| TCAAGTCGCACCAGTTAATT+TGG | + | chr6_2:69644837-69644856 | Msa0926070:CDS | 40.0% | |
| ! | GCACCAGTTAATTTGGATCT+TGG | + | chr6_2:69644844-69644863 | Msa0926070:CDS | 40.0% |
| TCAATCTTCATCATCAGTGC+TGG | - | chr6_2:69644905-69644924 | None:intergenic | 40.0% | |
| TTGGAATCAACGGTGAGTTA+GGG | - | chr6_2:69643772-69643791 | None:intergenic | 40.0% | |
| ! | TTTGGAATCAACGGTGAGTT+AGG | - | chr6_2:69643773-69643792 | None:intergenic | 40.0% |
| ACAAGCACTTCTTCAGCAAA+TGG | + | chr6_2:69643904-69643923 | Msa0926070:CDS | 40.0% | |
| CTTGTGAAGAAAGGAAGGTT+GGG | - | chr6_2:69644003-69644022 | None:intergenic | 40.0% | |
| ! | AGGATTTCTTTGGTGGTAGA+AGG | - | chr6_2:69644061-69644080 | None:intergenic | 40.0% |
| !! | GAAGGTTGGTGAAAAGTGAA+AGG | - | chr6_2:69644081-69644100 | None:intergenic | 40.0% |
| CGGAAACAGCTTCAAACATT+TGG | - | chr6_2:69644108-69644127 | None:intergenic | 40.0% | |
| ATCAAGAACTTCCTGGAGTT+CGG | - | chr6_2:69644128-69644147 | None:intergenic | 40.0% | |
| ! | CTCAGCATCTTTGAGTTTGT+TGG | - | chr6_2:69644218-69644237 | None:intergenic | 40.0% |
| ACAAACTCAAAGATGCTGAG+AGG | + | chr6_2:69644218-69644237 | Msa0926070:CDS | 40.0% | |
| CAAACTCAAAGATGCTGAGA+GGG | + | chr6_2:69644219-69644238 | Msa0926070:CDS | 40.0% | |
| GCAAATTTGCCTGGAATTCA+AGG | + | chr6_2:69644616-69644635 | Msa0926070:CDS | 40.0% | |
| AACTGTTGTTCCTCAATCCT+TGG | - | chr6_2:69644778-69644797 | None:intergenic | 40.0% | |
| GGTGCGACTTGAATAATTTC+TGG | - | chr6_2:69644829-69644848 | None:intergenic | 40.0% | |
| TCAAGTCGCACCAGTTAATT+TGG | + | chr6_2:69644837-69644856 | Msa0926070:CDS | 40.0% | |
| ! | GCACCAGTTAATTTGGATCT+TGG | + | chr6_2:69644844-69644863 | Msa0926070:CDS | 40.0% |
| TCAATCTTCATCATCAGTGC+TGG | - | chr6_2:69644905-69644924 | None:intergenic | 40.0% | |
| TAGCAGGTGACTGTACAACT+TGG | - | chr6_2:69643733-69643752 | None:intergenic | 45.0% | |
| AAGTTGTACAGTCACCTGCT+AGG | + | chr6_2:69643732-69643751 | Msa0926070:CDS | 45.0% | |
| ! | ACGGTGAGTTAGGGTTTGTT+AGG | - | chr6_2:69643763-69643782 | None:intergenic | 45.0% |
| !! | AAGTGCTTGTGCTCTAGGAA+GGG | - | chr6_2:69643894-69643913 | None:intergenic | 45.0% |
| !! | TGAAGAAGTGCTTGTGCTCT+AGG | - | chr6_2:69643899-69643918 | None:intergenic | 45.0% |
| GGGTGATACTTCAAAGAGCT+TGG | - | chr6_2:69643942-69643961 | None:intergenic | 45.0% | |
| TATCACCCAACAAGTCCCTT+TGG | + | chr6_2:69643954-69643973 | Msa0926070:CDS | 45.0% | |
| ATCACCCAACAAGTCCCTTT+GGG | + | chr6_2:69643955-69643974 | Msa0926070:CDS | 45.0% | |
| ! | CTAACCCAAAGGGACTTGTT+GGG | - | chr6_2:69643962-69643981 | None:intergenic | 45.0% |
| ACTAACCCAAAGGGACTTGT+TGG | - | chr6_2:69643963-69643982 | None:intergenic | 45.0% | |
| ACGGAATGCACTAACCCAAA+GGG | - | chr6_2:69643972-69643991 | None:intergenic | 45.0% | |
| CCTTGTGAAGAAAGGAAGGT+TGG | - | chr6_2:69644004-69644023 | None:intergenic | 45.0% | |
| CCAACCTTCCTTTCTTCACA+AGG | + | chr6_2:69644001-69644020 | Msa0926070:CDS | 45.0% | |
| !! | TTGGCCTTGTGAAGAAAGGA+AGG | - | chr6_2:69644008-69644027 | None:intergenic | 45.0% |
| TGCTAAGCAAAAGATCGACG+AGG | + | chr6_2:69644156-69644175 | Msa0926070:CDS | 45.0% | |
| ! | ACTTTTGCACCGCCAGAATT+TGG | + | chr6_2:69644406-69644425 | Msa0926070:CDS | 45.0% |
| GCAAGTGAATTGGTATCCAC+AGG | - | chr6_2:69644598-69644617 | None:intergenic | 45.0% | |
| GCCGGAACAGTAAAATTTGG+AGG | - | chr6_2:69644649-69644668 | None:intergenic | 45.0% | |
| ! | CCAAATTTTACTGTTCCGGC+CGG | + | chr6_2:69644649-69644668 | Msa0926070:CDS | 45.0% |
| ATACCAATTAAGCCACCACC+TGG | + | chr6_2:69644709-69644728 | Msa0926070:CDS | 45.0% | |
| TACCAATTAAGCCACCACCT+GGG | + | chr6_2:69644710-69644729 | Msa0926070:CDS | 45.0% | |
| ! | CTCAATCCTTGGTACTGGAA+GGG | - | chr6_2:69644767-69644786 | None:intergenic | 45.0% |
| TGTTCCTCAATCCTTGGTAC+TGG | - | chr6_2:69644772-69644791 | None:intergenic | 45.0% | |
| TAGCAGGTGACTGTACAACT+TGG | - | chr6_2:69643733-69643752 | None:intergenic | 45.0% | |
| AAGTTGTACAGTCACCTGCT+AGG | + | chr6_2:69643732-69643751 | Msa0926070:CDS | 45.0% | |
| ! | ACGGTGAGTTAGGGTTTGTT+AGG | - | chr6_2:69643763-69643782 | None:intergenic | 45.0% |
| !! | AAGTGCTTGTGCTCTAGGAA+GGG | - | chr6_2:69643894-69643913 | None:intergenic | 45.0% |
| !! | TGAAGAAGTGCTTGTGCTCT+AGG | - | chr6_2:69643899-69643918 | None:intergenic | 45.0% |
| GGGTGATACTTCAAAGAGCT+TGG | - | chr6_2:69643942-69643961 | None:intergenic | 45.0% | |
| TATCACCCAACAAGTCCCTT+TGG | + | chr6_2:69643954-69643973 | Msa0926070:CDS | 45.0% | |
| ATCACCCAACAAGTCCCTTT+GGG | + | chr6_2:69643955-69643974 | Msa0926070:CDS | 45.0% | |
| ! | CTAACCCAAAGGGACTTGTT+GGG | - | chr6_2:69643962-69643981 | None:intergenic | 45.0% |
| ACTAACCCAAAGGGACTTGT+TGG | - | chr6_2:69643963-69643982 | None:intergenic | 45.0% | |
| ACGGAATGCACTAACCCAAA+GGG | - | chr6_2:69643972-69643991 | None:intergenic | 45.0% | |
| CCTTGTGAAGAAAGGAAGGT+TGG | - | chr6_2:69644004-69644023 | None:intergenic | 45.0% | |
| CCAACCTTCCTTTCTTCACA+AGG | + | chr6_2:69644001-69644020 | Msa0926070:CDS | 45.0% | |
| !! | TTGGCCTTGTGAAGAAAGGA+AGG | - | chr6_2:69644008-69644027 | None:intergenic | 45.0% |
| TGCTAAGCAAAAGATCGACG+AGG | + | chr6_2:69644156-69644175 | Msa0926070:CDS | 45.0% | |
| ! | ACTTTTGCACCGCCAGAATT+TGG | + | chr6_2:69644406-69644425 | Msa0926070:CDS | 45.0% |
| GCAAGTGAATTGGTATCCAC+AGG | - | chr6_2:69644598-69644617 | None:intergenic | 45.0% | |
| GCCGGAACAGTAAAATTTGG+AGG | - | chr6_2:69644649-69644668 | None:intergenic | 45.0% | |
| ! | CCAAATTTTACTGTTCCGGC+CGG | + | chr6_2:69644649-69644668 | Msa0926070:CDS | 45.0% |
| ATACCAATTAAGCCACCACC+TGG | + | chr6_2:69644709-69644728 | Msa0926070:CDS | 45.0% | |
| TACCAATTAAGCCACCACCT+GGG | + | chr6_2:69644710-69644729 | Msa0926070:CDS | 45.0% | |
| ! | CTCAATCCTTGGTACTGGAA+GGG | - | chr6_2:69644767-69644786 | None:intergenic | 45.0% |
| TGTTCCTCAATCCTTGGTAC+TGG | - | chr6_2:69644772-69644791 | None:intergenic | 45.0% | |
| TTTGTTAGGCCTAGCCTAGC+AGG | - | chr6_2:69643749-69643768 | None:intergenic | 50.0% | |
| ! | GGGGTAGGGTTTGGAATCAA+CGG | - | chr6_2:69643782-69643801 | None:intergenic | 50.0% |
| !! | TGATGGTGATGGGTAGTCTG+AGG | - | chr6_2:69643821-69643840 | None:intergenic | 50.0% |
| !! | ATGGCGGTCTTGATGGTGAT+GGG | - | chr6_2:69643831-69643850 | None:intergenic | 50.0% |
| !! | AATGGCGGTCTTGATGGTGA+TGG | - | chr6_2:69643832-69643851 | None:intergenic | 50.0% |
| TCACCATCAAGACCGCCATT+TGG | + | chr6_2:69643832-69643851 | Msa0926070:CDS | 50.0% | |
| TTGCCAAATGGCGGTCTTGA+TGG | - | chr6_2:69643838-69643857 | None:intergenic | 50.0% | |
| AGAGAGTAGAGCAGGAGAAG+GGG | - | chr6_2:69643861-69643880 | None:intergenic | 50.0% | |
| GAGAGAGTAGAGCAGGAGAA+GGG | - | chr6_2:69643862-69643881 | None:intergenic | 50.0% | |
| AGAGAGAGTAGAGCAGGAGA+AGG | - | chr6_2:69643863-69643882 | None:intergenic | 50.0% | |
| !! | AGTGCTTGTGCTCTAGGAAG+GGG | - | chr6_2:69643893-69643912 | None:intergenic | 50.0% |
| !! | GAAGTGCTTGTGCTCTAGGA+AGG | - | chr6_2:69643895-69643914 | None:intergenic | 50.0% |
| CACGGAATGCACTAACCCAA+AGG | - | chr6_2:69643973-69643992 | None:intergenic | 50.0% | |
| !! | CTTTGGGTTAGTGCATTCCG+TGG | + | chr6_2:69643971-69643990 | Msa0926070:CDS | 50.0% |
| !! | GTGGTTGGCCTTGTGAAGAA+AGG | - | chr6_2:69644012-69644031 | None:intergenic | 50.0% |
| ! | TGAAGCTGTTTCCGAACTCC+AGG | + | chr6_2:69644114-69644133 | Msa0926070:CDS | 50.0% |
| CAGCTTCAGCTGAGACGATA+CGG | - | chr6_2:69644347-69644366 | None:intergenic | 50.0% | |
| GCTCTCATTTGCTCGTCTTG+CGG | - | chr6_2:69644472-69644491 | None:intergenic | 50.0% | |
| TTGGTATCCACAGGCTGTAG+AGG | - | chr6_2:69644589-69644608 | None:intergenic | 50.0% | |
| GGTAGCAGTCCTTGAATTCC+AGG | - | chr6_2:69644628-69644647 | None:intergenic | 50.0% | |
| CCGGCCGGAACAGTAAAATT+TGG | - | chr6_2:69644652-69644671 | None:intergenic | 50.0% | |
| ! | ATTTTACTGTTCCGGCCGGT+TGG | + | chr6_2:69644653-69644672 | Msa0926070:CDS | 50.0% |
| GGCAATTGTACAGGCATTCC+AGG | - | chr6_2:69644682-69644701 | None:intergenic | 50.0% | |
| ! | CCTCAATCCTTGGTACTGGA+AGG | - | chr6_2:69644768-69644787 | None:intergenic | 50.0% |
| CCTTCCAGTACCAAGGATTG+AGG | + | chr6_2:69644765-69644784 | Msa0926070:CDS | 50.0% | |
| GCTTTGGCTGAGGAACATGA+GGG | - | chr6_2:69644804-69644823 | None:intergenic | 50.0% | |
| ! | AGCTTTGGCTGAGGAACATG+AGG | - | chr6_2:69644805-69644824 | None:intergenic | 50.0% |
| !! | ATTTCTGGCAGCTTTGGCTG+AGG | - | chr6_2:69644814-69644833 | None:intergenic | 50.0% |
| TTTGTTAGGCCTAGCCTAGC+AGG | - | chr6_2:69643749-69643768 | None:intergenic | 50.0% | |
| ! | GGGGTAGGGTTTGGAATCAA+CGG | - | chr6_2:69643782-69643801 | None:intergenic | 50.0% |
| !! | TGATGGTGATGGGTAGTCTG+AGG | - | chr6_2:69643821-69643840 | None:intergenic | 50.0% |
| !! | ATGGCGGTCTTGATGGTGAT+GGG | - | chr6_2:69643831-69643850 | None:intergenic | 50.0% |
| !! | AATGGCGGTCTTGATGGTGA+TGG | - | chr6_2:69643832-69643851 | None:intergenic | 50.0% |
| TCACCATCAAGACCGCCATT+TGG | + | chr6_2:69643832-69643851 | Msa0926070:CDS | 50.0% | |
| TTGCCAAATGGCGGTCTTGA+TGG | - | chr6_2:69643838-69643857 | None:intergenic | 50.0% | |
| AGAGAGTAGAGCAGGAGAAG+GGG | - | chr6_2:69643861-69643880 | None:intergenic | 50.0% | |
| GAGAGAGTAGAGCAGGAGAA+GGG | - | chr6_2:69643862-69643881 | None:intergenic | 50.0% | |
| AGAGAGAGTAGAGCAGGAGA+AGG | - | chr6_2:69643863-69643882 | None:intergenic | 50.0% | |
| !! | AGTGCTTGTGCTCTAGGAAG+GGG | - | chr6_2:69643893-69643912 | None:intergenic | 50.0% |
| !! | GAAGTGCTTGTGCTCTAGGA+AGG | - | chr6_2:69643895-69643914 | None:intergenic | 50.0% |
| CACGGAATGCACTAACCCAA+AGG | - | chr6_2:69643973-69643992 | None:intergenic | 50.0% | |
| !! | CTTTGGGTTAGTGCATTCCG+TGG | + | chr6_2:69643971-69643990 | Msa0926070:CDS | 50.0% |
| !! | GTGGTTGGCCTTGTGAAGAA+AGG | - | chr6_2:69644012-69644031 | None:intergenic | 50.0% |
| ! | TGAAGCTGTTTCCGAACTCC+AGG | + | chr6_2:69644114-69644133 | Msa0926070:CDS | 50.0% |
| CAGCTTCAGCTGAGACGATA+CGG | - | chr6_2:69644347-69644366 | None:intergenic | 50.0% | |
| GCTCTCATTTGCTCGTCTTG+CGG | - | chr6_2:69644472-69644491 | None:intergenic | 50.0% | |
| TTGGTATCCACAGGCTGTAG+AGG | - | chr6_2:69644589-69644608 | None:intergenic | 50.0% | |
| GGTAGCAGTCCTTGAATTCC+AGG | - | chr6_2:69644628-69644647 | None:intergenic | 50.0% | |
| CCGGCCGGAACAGTAAAATT+TGG | - | chr6_2:69644652-69644671 | None:intergenic | 50.0% | |
| ! | ATTTTACTGTTCCGGCCGGT+TGG | + | chr6_2:69644653-69644672 | Msa0926070:CDS | 50.0% |
| GGCAATTGTACAGGCATTCC+AGG | - | chr6_2:69644682-69644701 | None:intergenic | 50.0% | |
| ! | CCTCAATCCTTGGTACTGGA+AGG | - | chr6_2:69644768-69644787 | None:intergenic | 50.0% |
| CCTTCCAGTACCAAGGATTG+AGG | + | chr6_2:69644765-69644784 | Msa0926070:CDS | 50.0% | |
| GCTTTGGCTGAGGAACATGA+GGG | - | chr6_2:69644804-69644823 | None:intergenic | 50.0% | |
| ! | AGCTTTGGCTGAGGAACATG+AGG | - | chr6_2:69644805-69644824 | None:intergenic | 50.0% |
| !! | ATTTCTGGCAGCTTTGGCTG+AGG | - | chr6_2:69644814-69644833 | None:intergenic | 50.0% |
| GTACAGTCACCTGCTAGGCT+AGG | + | chr6_2:69643737-69643756 | Msa0926070:CDS | 55.0% | |
| !! | AGCTTTGGAGGGGTAGGGTT+TGG | - | chr6_2:69643791-69643810 | None:intergenic | 55.0% |
| GATGGGTAGTCTGAGGAGGA+GGG | - | chr6_2:69643814-69643833 | None:intergenic | 55.0% | |
| ! | TGATGGGTAGTCTGAGGAGG+AGG | - | chr6_2:69643815-69643834 | None:intergenic | 55.0% |
| !! | TGGTGATGGGTAGTCTGAGG+AGG | - | chr6_2:69643818-69643837 | None:intergenic | 55.0% |
| GAGAAGGGGTTGCCAAATGG+CGG | - | chr6_2:69643847-69643866 | None:intergenic | 55.0% | |
| CAGGAGAAGGGGTTGCCAAA+TGG | - | chr6_2:69643850-69643869 | None:intergenic | 55.0% | |
| GGGAGAAGAGAGAGTAGAGC+AGG | - | chr6_2:69643869-69643888 | None:intergenic | 55.0% | |
| !! | CTTGTGCTCTAGGAAGGGGT+GGG | - | chr6_2:69643889-69643908 | None:intergenic | 55.0% |
| GGAAGGTTGGGAGTGATCCA+CGG | - | chr6_2:69643991-69644010 | None:intergenic | 55.0% | |
| GCGATGCAGAAGAACGTGGT+TGG | - | chr6_2:69644027-69644046 | None:intergenic | 55.0% | |
| TCGAGCGATGCAGAAGAACG+TGG | - | chr6_2:69644031-69644050 | None:intergenic | 55.0% | |
| CAGCTGAGACGATACGGTTG+AGG | - | chr6_2:69644341-69644360 | None:intergenic | 55.0% | |
| ! | CACCGCCAGAATTTGGAGCA+GGG | + | chr6_2:69644413-69644432 | Msa0926070:CDS | 55.0% |
| TGCCCTGCTCCAAATTCTGG+CGG | - | chr6_2:69644418-69644437 | None:intergenic | 55.0% | |
| ATTTGCTCGTCTTGCGGTGC+AGG | - | chr6_2:69644466-69644485 | None:intergenic | 55.0% | |
| GTATCCACAGGCTGTAGAGG+TGG | - | chr6_2:69644586-69644605 | None:intergenic | 55.0% | |
| AGGCATTCCAGGCTTCCAAC+CGG | - | chr6_2:69644671-69644690 | None:intergenic | 55.0% | |
| ! | CACCCAGGTGGTGGCTTAAT+TGG | - | chr6_2:69644715-69644734 | None:intergenic | 55.0% |
| CAATTAAGCCACCACCTGGG+TGG | + | chr6_2:69644713-69644732 | Msa0926070:CDS | 55.0% | |
| TGGACTCCCTTCCAGTACCA+AGG | + | chr6_2:69644758-69644777 | Msa0926070:CDS | 55.0% | |
| GTACAGTCACCTGCTAGGCT+AGG | + | chr6_2:69643737-69643756 | Msa0926070:CDS | 55.0% | |
| !! | AGCTTTGGAGGGGTAGGGTT+TGG | - | chr6_2:69643791-69643810 | None:intergenic | 55.0% |
| GATGGGTAGTCTGAGGAGGA+GGG | - | chr6_2:69643814-69643833 | None:intergenic | 55.0% | |
| ! | TGATGGGTAGTCTGAGGAGG+AGG | - | chr6_2:69643815-69643834 | None:intergenic | 55.0% |
| !! | TGGTGATGGGTAGTCTGAGG+AGG | - | chr6_2:69643818-69643837 | None:intergenic | 55.0% |
| GAGAAGGGGTTGCCAAATGG+CGG | - | chr6_2:69643847-69643866 | None:intergenic | 55.0% | |
| CAGGAGAAGGGGTTGCCAAA+TGG | - | chr6_2:69643850-69643869 | None:intergenic | 55.0% | |
| GGGAGAAGAGAGAGTAGAGC+AGG | - | chr6_2:69643869-69643888 | None:intergenic | 55.0% | |
| !! | CTTGTGCTCTAGGAAGGGGT+GGG | - | chr6_2:69643889-69643908 | None:intergenic | 55.0% |
| GGAAGGTTGGGAGTGATCCA+CGG | - | chr6_2:69643991-69644010 | None:intergenic | 55.0% | |
| GCGATGCAGAAGAACGTGGT+TGG | - | chr6_2:69644027-69644046 | None:intergenic | 55.0% | |
| TCGAGCGATGCAGAAGAACG+TGG | - | chr6_2:69644031-69644050 | None:intergenic | 55.0% | |
| CAGCTGAGACGATACGGTTG+AGG | - | chr6_2:69644341-69644360 | None:intergenic | 55.0% | |
| ! | CACCGCCAGAATTTGGAGCA+GGG | + | chr6_2:69644413-69644432 | Msa0926070:CDS | 55.0% |
| TGCCCTGCTCCAAATTCTGG+CGG | - | chr6_2:69644418-69644437 | None:intergenic | 55.0% | |
| ATTTGCTCGTCTTGCGGTGC+AGG | - | chr6_2:69644466-69644485 | None:intergenic | 55.0% | |
| GTATCCACAGGCTGTAGAGG+TGG | - | chr6_2:69644586-69644605 | None:intergenic | 55.0% | |
| AGGCATTCCAGGCTTCCAAC+CGG | - | chr6_2:69644671-69644690 | None:intergenic | 55.0% | |
| ! | CACCCAGGTGGTGGCTTAAT+TGG | - | chr6_2:69644715-69644734 | None:intergenic | 55.0% |
| CAATTAAGCCACCACCTGGG+TGG | + | chr6_2:69644713-69644732 | Msa0926070:CDS | 55.0% | |
| TGGACTCCCTTCCAGTACCA+AGG | + | chr6_2:69644758-69644777 | Msa0926070:CDS | 55.0% | |
| !! | GAGGGAGCTTTGGAGGGGTA+GGG | - | chr6_2:69643796-69643815 | None:intergenic | 60.0% |
| !! | AGGAGGAGGGAGCTTTGGAG+GGG | - | chr6_2:69643801-69643820 | None:intergenic | 60.0% |
| !! | GAGGAGGAGGGAGCTTTGGA+GGG | - | chr6_2:69643802-69643821 | None:intergenic | 60.0% |
| ! | TGAGGAGGAGGGAGCTTTGG+AGG | - | chr6_2:69643803-69643822 | None:intergenic | 60.0% |
| GTCTGAGGAGGAGGGAGCTT+TGG | - | chr6_2:69643806-69643825 | None:intergenic | 60.0% | |
| !! | GCTTGTGCTCTAGGAAGGGG+TGG | - | chr6_2:69643890-69643909 | None:intergenic | 60.0% |
| ! | GCACCGCCAGAATTTGGAGC+AGG | + | chr6_2:69644412-69644431 | Msa0926070:CDS | 60.0% |
| ! | GCCAGAATTTGGAGCAGGGC+AGG | + | chr6_2:69644417-69644436 | Msa0926070:CDS | 60.0% |
| GCCTGCCCTGCTCCAAATTC+TGG | - | chr6_2:69644421-69644440 | None:intergenic | 60.0% | |
| TCCACAGGCTGTAGAGGTGG+AGG | - | chr6_2:69644583-69644602 | None:intergenic | 60.0% | |
| ATTCCAGGCTTCCAACCGGC+CGG | - | chr6_2:69644667-69644686 | None:intergenic | 60.0% | |
| CACCACCTGGGTGGAAACCA+GGG | + | chr6_2:69644722-69644741 | Msa0926070:CDS | 60.0% | |
| ACCACCTGGGTGGAAACCAG+GGG | + | chr6_2:69644723-69644742 | Msa0926070:CDS | 60.0% | |
| GTGGAAACCAGGGGATCCTG+TGG | + | chr6_2:69644732-69644751 | Msa0926070:CDS | 60.0% | |
| ACCAGGGGATCCTGTGGCAT+TGG | + | chr6_2:69644738-69644757 | Msa0926070:CDS | 60.0% | |
| TCCAATGCCACAGGATCCCC+TGG | - | chr6_2:69644742-69644761 | None:intergenic | 60.0% | |
| GGAAGGGAGTCCAATGCCAC+AGG | - | chr6_2:69644751-69644770 | None:intergenic | 60.0% | |
| !! | GAGGGAGCTTTGGAGGGGTA+GGG | - | chr6_2:69643796-69643815 | None:intergenic | 60.0% |
| !! | AGGAGGAGGGAGCTTTGGAG+GGG | - | chr6_2:69643801-69643820 | None:intergenic | 60.0% |
| !! | GAGGAGGAGGGAGCTTTGGA+GGG | - | chr6_2:69643802-69643821 | None:intergenic | 60.0% |
| ! | TGAGGAGGAGGGAGCTTTGG+AGG | - | chr6_2:69643803-69643822 | None:intergenic | 60.0% |
| GTCTGAGGAGGAGGGAGCTT+TGG | - | chr6_2:69643806-69643825 | None:intergenic | 60.0% | |
| !! | GCTTGTGCTCTAGGAAGGGG+TGG | - | chr6_2:69643890-69643909 | None:intergenic | 60.0% |
| ! | GCACCGCCAGAATTTGGAGC+AGG | + | chr6_2:69644412-69644431 | Msa0926070:CDS | 60.0% |
| ! | GCCAGAATTTGGAGCAGGGC+AGG | + | chr6_2:69644417-69644436 | Msa0926070:CDS | 60.0% |
| GCCTGCCCTGCTCCAAATTC+TGG | - | chr6_2:69644421-69644440 | None:intergenic | 60.0% | |
| TCCACAGGCTGTAGAGGTGG+AGG | - | chr6_2:69644583-69644602 | None:intergenic | 60.0% | |
| ATTCCAGGCTTCCAACCGGC+CGG | - | chr6_2:69644667-69644686 | None:intergenic | 60.0% | |
| CACCACCTGGGTGGAAACCA+GGG | + | chr6_2:69644722-69644741 | Msa0926070:CDS | 60.0% | |
| ACCACCTGGGTGGAAACCAG+GGG | + | chr6_2:69644723-69644742 | Msa0926070:CDS | 60.0% | |
| GTGGAAACCAGGGGATCCTG+TGG | + | chr6_2:69644732-69644751 | Msa0926070:CDS | 60.0% | |
| ACCAGGGGATCCTGTGGCAT+TGG | + | chr6_2:69644738-69644757 | Msa0926070:CDS | 60.0% | |
| TCCAATGCCACAGGATCCCC+TGG | - | chr6_2:69644742-69644761 | None:intergenic | 60.0% | |
| GGAAGGGAGTCCAATGCCAC+AGG | - | chr6_2:69644751-69644770 | None:intergenic | 60.0% | |
| !! | GGAGGGAGCTTTGGAGGGGT+AGG | - | chr6_2:69643797-69643816 | None:intergenic | 65.0% |
| ! | TGGAAGTGCACCCCGGAGAG+GGG | - | chr6_2:69644443-69644462 | None:intergenic | 65.0% |
| ! | GTGGAAGTGCACCCCGGAGA+GGG | - | chr6_2:69644444-69644463 | None:intergenic | 65.0% |
| ! | GTGCAGGTGGAAGTGCACCC+CGG | - | chr6_2:69644450-69644469 | None:intergenic | 65.0% |
| TGCTCGTCTTGCGGTGCAGG+TGG | - | chr6_2:69644463-69644482 | None:intergenic | 65.0% | |
| GCCTCCACCTCTACAGCCTG+TGG | + | chr6_2:69644579-69644598 | Msa0926070:CDS | 65.0% | |
| CCTGGTTTCCACCCAGGTGG+TGG | - | chr6_2:69644724-69644743 | None:intergenic | 65.0% | |
| CCACCACCTGGGTGGAAACC+AGG | + | chr6_2:69644721-69644740 | Msa0926070:CDS | 65.0% | |
| TCCCCTGGTTTCCACCCAGG+TGG | - | chr6_2:69644727-69644746 | None:intergenic | 65.0% | |
| GGATCCCCTGGTTTCCACCC+AGG | - | chr6_2:69644730-69644749 | None:intergenic | 65.0% | |
| !! | GGAGGGAGCTTTGGAGGGGT+AGG | - | chr6_2:69643797-69643816 | None:intergenic | 65.0% |
| ! | TGGAAGTGCACCCCGGAGAG+GGG | - | chr6_2:69644443-69644462 | None:intergenic | 65.0% |
| ! | GTGGAAGTGCACCCCGGAGA+GGG | - | chr6_2:69644444-69644463 | None:intergenic | 65.0% |
| ! | GTGCAGGTGGAAGTGCACCC+CGG | - | chr6_2:69644450-69644469 | None:intergenic | 65.0% |
| TGCTCGTCTTGCGGTGCAGG+TGG | - | chr6_2:69644463-69644482 | None:intergenic | 65.0% | |
| GCCTCCACCTCTACAGCCTG+TGG | + | chr6_2:69644579-69644598 | Msa0926070:CDS | 65.0% | |
| CCTGGTTTCCACCCAGGTGG+TGG | - | chr6_2:69644724-69644743 | None:intergenic | 65.0% | |
| CCACCACCTGGGTGGAAACC+AGG | + | chr6_2:69644721-69644740 | Msa0926070:CDS | 65.0% | |
| TCCCCTGGTTTCCACCCAGG+TGG | - | chr6_2:69644727-69644746 | None:intergenic | 65.0% | |
| GGATCCCCTGGTTTCCACCC+AGG | - | chr6_2:69644730-69644749 | None:intergenic | 65.0% | |
| ! | GGTGGAAGTGCACCCCGGAG+AGG | - | chr6_2:69644445-69644464 | None:intergenic | 70.0% |
| GTTCCGGCCGGTTGGAAGCC+TGG | + | chr6_2:69644661-69644680 | Msa0926070:CDS | 70.0% | |
| ! | GGTGGAAGTGCACCCCGGAG+AGG | - | chr6_2:69644445-69644464 | None:intergenic | 70.0% |
| GTTCCGGCCGGTTGGAAGCC+TGG | + | chr6_2:69644661-69644680 | Msa0926070:CDS | 70.0% | |
| GAGCAGGGCAGGCCCCTCTC+CGG | + | chr6_2:69644428-69644447 | Msa0926070:CDS | 75.0% | |
| AGCAGGGCAGGCCCCTCTCC+GGG | + | chr6_2:69644429-69644448 | Msa0926070:CDS | 75.0% | |
| GAGCAGGGCAGGCCCCTCTC+CGG | + | chr6_2:69644428-69644447 | Msa0926070:CDS | 75.0% | |
| AGCAGGGCAGGCCCCTCTCC+GGG | + | chr6_2:69644429-69644448 | Msa0926070:CDS | 75.0% | |
| ! | GCAGGGCAGGCCCCTCTCCG+GGG | + | chr6_2:69644430-69644449 | Msa0926070:CDS | 80.0% |
| ! | GCAGGGCAGGCCCCTCTCCG+GGG | + | chr6_2:69644430-69644449 | Msa0926070:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 69643719 | 69644924 | 69643719 | ID=Msa0926070;Name=Msa0926070 |
| chr6_2 | mRNA | 69643719 | 69644924 | 69643719 | ID=Msa0926070-mRNA-1;Parent=Msa0926070;Name=Msa0926070-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|401 |
| chr6_2 | exon | 69643719 | 69644924 | 69643719 | ID=Msa0926070-mRNA-1:exon:11258;Parent=Msa0926070-mRNA-1 |
| chr6_2 | CDS | 69643719 | 69644924 | 69643719 | ID=Msa0926070-mRNA-1:cds;Parent=Msa0926070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
