AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0927320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0927320 MtrunA17_Chr4g0003211 71.429 91 17 3 53 140 194 278 3.98e-33 123
Msa0927320 MtrunA17_Chr5g0444821 76.471 51 9 1 80 127 27 77 3.94e-20 79.3
Msa0927320 MtrunA17_Chr3g0098201 79.412 34 7 0 44 77 60 93 8.09e-13 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0927320 AT1G17870.1 60.870 92 27 3 52 140 163 248 8.57e-27 105

Find 100 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCCGGAGTGGCAGGTTTC+TGG 0.124896 6_2:-71620578 None:intergenic
TTTAGGGATGGTGGTTTGGC+TGG 0.159777 6_2:+71624683 Msa0927320:intron
GATTATAAGGGTTTGGCTTT+GGG 0.162670 6_2:+71625418 Msa0927320:three_prime_UTR
ATAATTAAATATTTATAAAA+AGG 0.206449 6_2:-71625035 None:intergenic
GGATTATAAGGGTTTGGCTT+TGG 0.209948 6_2:+71625417 Msa0927320:three_prime_UTR
TTGAAAGGCATAATGTTAAT+TGG 0.229644 6_2:+71625875 Msa0927320:three_prime_UTR
ACAAAACATATTCATGTAAT+AGG 0.231885 6_2:-71625603 None:intergenic
ACCGCAAAAGGGCACTCTTT+TGG 0.270822 6_2:-71625230 None:intergenic
CGTCTGCTGTTTCTGTTTGT+TGG 0.282688 6_2:+71625299 Msa0927320:three_prime_UTR
GTTTCTGTTTCTGCAATTTA+CGG 0.307736 6_2:+71625321 Msa0927320:three_prime_UTR
ACAGGTTTCTAAATTTCTTT+TGG 0.315812 6_2:+71624765 Msa0927320:three_prime_UTR
AACTTCCCCTTTACCGCAAA+AGG 0.317152 6_2:-71625242 None:intergenic
TTGGGTGGATTATAAGGGTT+TGG 0.322717 6_2:+71625411 Msa0927320:three_prime_UTR
CACTAAGAATCTTATGTGTT+TGG 0.324862 6_2:-71625678 None:intergenic
TTGCGACTTCAGGTTGAGGC+TGG 0.332497 6_2:+71625267 Msa0927320:three_prime_UTR
AGAATGGAGGCAAGAGAAAA+GGG 0.346503 6_2:-71620502 None:intergenic
TTAGGGATGGTGGTTTGGCT+GGG 0.354635 6_2:+71624684 Msa0927320:intron
GCGGATCTCCGCAATAGTTC+TGG 0.361953 6_2:-71620532 None:intergenic
GGCGGGTGATGGTGGTGATA+TGG 0.362177 6_2:-71620554 None:intergenic
ATTATAAGAAGCAAAATATA+AGG 0.362628 6_2:-71625105 None:intergenic
GTTTAGTTAAAGAGTTGTTT+TGG 0.364632 6_2:+71621082 Msa0927320:intron
TTCGGAATGATTTCATCAAT+TGG 0.365503 6_2:-71621169 None:intergenic
ACTACGGATGTTAGTGCATT+TGG 0.373160 6_2:+71621112 Msa0927320:CDS
AGAAGTTGTCTTATGGTTCA+TGG 0.373176 6_2:+71621225 Msa0927320:CDS
TCGAAATTTGCAATCTCAAC+TGG 0.381812 6_2:+71620616 Msa0927320:CDS
ATGGCTTCTTTCTCTTTATC+CGG 0.383807 6_2:-71620594 None:intergenic
AGGTTTCTGGCGGCGGGTGA+TGG 0.389832 6_2:-71620565 None:intergenic
CATTGCAGAGAGTACCTGTT+TGG 0.397762 6_2:-71621269 None:intergenic
GGAGTTAGTGGAGGATATTA+AGG 0.399365 6_2:+71625136 Msa0927320:three_prime_UTR
GCGGTCTGTTTGCTGTCAGC+AGG 0.402737 6_2:+71625372 Msa0927320:three_prime_UTR
TTCTCTTTATCCGGAGTGGC+AGG 0.405090 6_2:-71620585 None:intergenic
GTGTCCTGACCGATTCCTAT+TGG 0.417399 6_2:+71625743 Msa0927320:three_prime_UTR
TAGTAGAAATTAGAATTAGT+TGG 0.420264 6_2:+71624836 Msa0927320:three_prime_UTR
TGATGAAATCATTCCGAAGT+TGG 0.423679 6_2:+71621174 Msa0927320:CDS
GAGACTTTCTTCTCCAACTT+CGG 0.424393 6_2:-71621187 None:intergenic
ATTATAAGGGTTTGGCTTTG+GGG 0.427219 6_2:+71625419 Msa0927320:three_prime_UTR
GAGAATGGAGGCAAGAGAAA+AGG 0.427615 6_2:-71620503 None:intergenic
AAAAGATGGCATTACCAAAC+AGG 0.438970 6_2:+71621255 Msa0927320:CDS
TGCGACTTCAGGTTGAGGCT+GGG 0.439045 6_2:+71625268 Msa0927320:three_prime_UTR
TTGAGTTCATATGTTGAAGA+TGG 0.444972 6_2:+71624708 Msa0927320:CDS
CATATGTTGATGTCTCTATT+CGG 0.449908 6_2:+71626029 Msa0927320:three_prime_UTR
GGTTGTTCCCGTCTTTCTGC+AGG 0.450595 6_2:+71625764 Msa0927320:three_prime_UTR
GGGAGAAGCTTTGTTGATGA+AGG 0.456408 6_2:-71620661 None:intergenic
GAGTGGCAGGTTTCTGGCGG+CGG 0.463168 6_2:-71620572 None:intergenic
TAATCAAGTCTAGGAGTTAG+TGG 0.464722 6_2:+71625124 Msa0927320:three_prime_UTR
CAGGTAGAGAAGTTGTCTTA+TGG 0.467541 6_2:+71621218 Msa0927320:CDS
TGGTAGAGAAAGAGAGAGAG+AGG 0.476483 6_2:-71620464 None:intergenic
ATAAGGCAGTTTGATCTTCG+TGG 0.477636 6_2:-71625088 None:intergenic
TTTCTGGCGGCGGGTGATGG+TGG 0.480273 6_2:-71620562 None:intergenic
CCGCCAGAAACCTGCCACTC+CGG 0.482811 6_2:+71620575 Msa0927320:CDS
CATGAGCATGTAGCTATAGT+TGG 0.483941 6_2:-71624912 None:intergenic
TGAGAAGGTCATGCGTTGAC+AGG 0.489224 6_2:+71624747 Msa0927320:three_prime_UTR
AGTGGCAGGTTTCTGGCGGC+GGG 0.492647 6_2:-71620571 None:intergenic
AAAGTTCAAGTAGTATCGTT+AGG 0.496646 6_2:+71625570 Msa0927320:three_prime_UTR
TAGTTCTGGCGATGGGAGAA+TGG 0.497767 6_2:-71620518 None:intergenic
CGAATAGAGACATCAACATA+TGG 0.498254 6_2:-71626028 None:intergenic
GAAAGACGGGAACAACCAAT+AGG 0.498957 6_2:-71625758 None:intergenic
AATCCGTTTGGTGACTTGAA+AGG 0.499882 6_2:+71625860 Msa0927320:three_prime_UTR
TTTGAGCAGTTTGAGTTCGC+CGG 0.500195 6_2:+71625178 Msa0927320:three_prime_UTR
TAAAGCTCACGGGCACGAAA+AGG 0.504736 6_2:-71625473 None:intergenic
TTAAGGTGTTGGCGTGGAGT+TGG 0.507196 6_2:+71625153 Msa0927320:three_prime_UTR
GCGACTTCAGGTTGAGGCTG+GGG 0.508711 6_2:+71625269 Msa0927320:three_prime_UTR
CACGAAAAGGAAAATTCAAA+AGG 0.512795 6_2:-71625460 None:intergenic
AGTGGAGGATATTAAGGTGT+TGG 0.517791 6_2:+71625142 Msa0927320:three_prime_UTR
AAGAAAGTCTCCGATGCAGC+AGG 0.520757 6_2:+71621199 Msa0927320:CDS
AGTTCATATGTTGAAGATGG+TGG 0.522449 6_2:+71624711 Msa0927320:CDS
TCATCAGTGCGTGTTTCACT+TGG 0.523680 6_2:-71625822 None:intergenic
ACTTCCCCTTTACCGCAAAA+GGG 0.530310 6_2:-71625241 None:intergenic
ATGCCTTTCAAGTCACCAAA+CGG 0.532764 6_2:-71625863 None:intergenic
CGGGAACAACCAATAGGAAT+CGG 0.533586 6_2:-71625752 None:intergenic
AACTTCTCTACCTGCTGCAT+CGG 0.534366 6_2:-71621209 None:intergenic
GTTGAGATTGCAAATTTCGA+TGG 0.535057 6_2:-71620613 None:intergenic
TGCTTCTTATAATCAAGTCT+AGG 0.535278 6_2:+71625115 Msa0927320:three_prime_UTR
GAATGGAGGCAAGAGAAAAG+GGG 0.539013 6_2:-71620501 None:intergenic
GAATTTACCTGCAGAAAGAC+GGG 0.539315 6_2:-71625771 None:intergenic
CAGGTTGAGGCTGGGGTATG+CGG 0.542915 6_2:+71625276 Msa0927320:three_prime_UTR
CTCCGCAATAGTTCTGGCGA+TGG 0.548097 6_2:-71620526 None:intergenic
AGAGAGAGGAGGGTTAGTGA+AGG 0.550082 6_2:-71620450 None:intergenic
TTCTTTCTCTTTATCCGGAG+TGG 0.550152 6_2:-71620589 None:intergenic
GGAGAAGCTTTGTTGATGAA+GGG 0.551154 6_2:-71620660 None:intergenic
TGAATTTACCTGCAGAAAGA+CGG 0.558238 6_2:-71625772 None:intergenic
TTCATGTAATAGGTTGACAT+TGG 0.560803 6_2:-71625593 None:intergenic
ACAACCAATAGGAATCGGTC+AGG 0.574505 6_2:-71625747 None:intergenic
TCCGCAATAGTTCTGGCGAT+GGG 0.583582 6_2:-71620525 None:intergenic
CCGGAGTGGCAGGTTTCTGG+CGG 0.585922 6_2:-71620575 None:intergenic
TGCAGGTAAATTCAGTCTGT+AGG 0.588021 6_2:+71625781 Msa0927320:three_prime_UTR
AATGGAGGCAAGAGAAAAGG+GGG 0.591828 6_2:-71620500 None:intergenic
AGATGCACAACTAAAGCTCA+CGG 0.598655 6_2:-71625484 None:intergenic
GATGTTAGTGCATTTGGTGA+CGG 0.599702 6_2:+71621118 Msa0927320:CDS
TCCCATCGCCAGAACTATTG+CGG 0.610260 6_2:+71620524 Msa0927320:CDS
GGGTGATGGTGGTGATATGG+CGG 0.612817 6_2:-71620551 None:intergenic
CTGACAGCAAACAGACCGCA+TGG 0.631951 6_2:-71625368 None:intergenic
AGGATATTAAGGTGTTGGCG+TGG 0.633337 6_2:+71625147 Msa0927320:three_prime_UTR
GGAGTGATGCATTGATGAGA+AGG 0.635472 6_2:+71624732 Msa0927320:exon
GTTAGTGCATTTGGTGACGG+AGG 0.638217 6_2:+71621121 Msa0927320:CDS
GATGCACAACTAAAGCTCAC+GGG 0.655953 6_2:-71625483 None:intergenic
TACATATGCAATAACAGACA+CGG 0.665298 6_2:-71624985 None:intergenic
TTCTGGCGATGGGAGAATGG+AGG 0.674007 6_2:-71620515 None:intergenic
TCAAGTCTAGGAGTTAGTGG+AGG 0.730963 6_2:+71625127 Msa0927320:three_prime_UTR
ACAGCAAACAGACCGCATGG+AGG 0.786372 6_2:-71625365 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAAATATTTATAAAA+AGG - chr6_2:71625038-71625057 None:intergenic 0.0%
!!! TTTATTTATTTTTTTTAATT+TGG + chr6_2:71625979-71625998 Msa0927320:intron 0.0%
!!! TATATAATAAATTTTCAGAT+TGG - chr6_2:71622512-71622531 None:intergenic 10.0%
!! ATTTCTATTTAATAAAAGTT+TGG + chr6_2:71623496-71623515 Msa0927320:intron 10.0%
!!! TTTAATATTTTATTTGACTT+TGG + chr6_2:71623979-71623998 Msa0927320:intron 10.0%
!! CAATAATGTGAATTAATTAA+AGG - chr6_2:71620841-71620860 None:intergenic 15.0%
!!! GTTTTTCAATTTTGTTTTTA+GGG + chr6_2:71620897-71620916 Msa0927320:intron 15.0%
!! ATATTAGCAAGAAAATAAAA+TGG - chr6_2:71621310-71621329 None:intergenic 15.0%
!! AAAGTACAAAAATACAATTA+AGG + chr6_2:71621744-71621763 Msa0927320:intron 15.0%
!!! TCAAAATATATCACTTTTTT+CGG + chr6_2:71621981-71622000 Msa0927320:intron 15.0%
!!! ACAAAAATGTGTTTTTATTT+TGG + chr6_2:71622256-71622275 Msa0927320:intron 15.0%
!!! TTTTATAAAAACAACATCAA+TGG - chr6_2:71622342-71622361 None:intergenic 15.0%
!!! TAATATTTGATTGACTTTTA+CGG + chr6_2:71622865-71622884 Msa0927320:intron 15.0%
!! TATATATTCAAGATTGTAAA+TGG + chr6_2:71623090-71623109 Msa0927320:intron 15.0%
!! ATATATTCAAGATTGTAAAT+GGG + chr6_2:71623091-71623110 Msa0927320:intron 15.0%
!! TGATTATTCTATTATCTAAA+TGG + chr6_2:71623283-71623302 Msa0927320:intron 15.0%
!! TATCTATACAAAAACAAAAA+TGG - chr6_2:71623825-71623844 None:intergenic 15.0%
!!! TTTTAAAACATTATAACCTA+AGG + chr6_2:71624168-71624187 Msa0927320:intron 15.0%
!! AGAAGATATAATCTAATTTA+TGG - chr6_2:71624425-71624444 None:intergenic 15.0%
!! TTAGATTATATCTTCTATTT+CGG + chr6_2:71624429-71624448 Msa0927320:intron 15.0%
!!! CAAATTTAATTAGTTTTATC+AGG + chr6_2:71624476-71624495 Msa0927320:intron 15.0%
!!! TTTTTTTCCTTCTTATTTTA+GGG + chr6_2:71624667-71624686 Msa0927320:intron 15.0%
!! ATTATAAGAAGCAAAATATA+AGG - chr6_2:71625108-71625127 None:intergenic 15.0%
!!! AATAATTAGACTCTTTTTTT+GGG - chr6_2:71625543-71625562 None:intergenic 15.0%
!! AACATTAAACATAATTAAAC+AGG - chr6_2:71625943-71625962 None:intergenic 15.0%
!! TTTAATTATGTTTAATGTTC+TGG + chr6_2:71625944-71625963 Msa0927320:intron 15.0%
!!! ATTTTTTTTAATTTGGAAAC+AGG + chr6_2:71625986-71626005 Msa0927320:intron 15.0%
!!! CGTTTTTCAATTTTGTTTTT+AGG + chr6_2:71620896-71620915 Msa0927320:intron 20.0%
!!! TGTTTTTAACTTTATCCTAT+TGG - chr6_2:71621383-71621402 None:intergenic 20.0%
!! AATTGCTAATAAAATGTAGT+AGG - chr6_2:71621639-71621658 None:intergenic 20.0%
!!! TAAATGTAAATTTTAGTTGC+CGG - chr6_2:71621864-71621883 None:intergenic 20.0%
!! AAATTTAGGAATTGATTAGA+AGG - chr6_2:71622088-71622107 None:intergenic 20.0%
!! GAAATCAATTAAAGTTTAGA+AGG - chr6_2:71622115-71622134 None:intergenic 20.0%
!! TTATAGAGAGAAAAATTATG+AGG - chr6_2:71622429-71622448 None:intergenic 20.0%
!!! TCATAATTTTTCTCTCTATA+AGG + chr6_2:71622428-71622447 Msa0927320:intron 20.0%
!!! CATAATTTTTCTCTCTATAA+GGG + chr6_2:71622429-71622448 Msa0927320:intron 20.0%
!! TTTGATTAACATCTGATTAT+AGG + chr6_2:71622722-71622741 Msa0927320:intron 20.0%
!!! TACTATAAAGTGTTTTTGTT+TGG + chr6_2:71622748-71622767 Msa0927320:intron 20.0%
!! TTTGTTTATGTAACTTATCT+CGG + chr6_2:71622807-71622826 Msa0927320:intron 20.0%
!!! TCTTTAATTTATTTGATGTC+AGG + chr6_2:71622927-71622946 Msa0927320:intron 20.0%
!!! ATGTTTTTTAATCCATTTAG+AGG + chr6_2:71622985-71623004 Msa0927320:intron 20.0%
!! AGAAAAATAAATCACAAAGA+TGG - chr6_2:71623066-71623085 None:intergenic 20.0%
!! ATTGATATCATAAAACTACA+TGG - chr6_2:71623137-71623156 None:intergenic 20.0%
!!! TGTAGTTTTATGATATCAAT+AGG + chr6_2:71623137-71623156 Msa0927320:intron 20.0%
!!! AAAATTCTCCAAGTTATTTT+GGG - chr6_2:71623456-71623475 None:intergenic 20.0%
!!! ATCTTTTATCCTAAATAATC+TGG - chr6_2:71623682-71623701 None:intergenic 20.0%
!! AATATTAAAAAGCTATCGAT+TGG - chr6_2:71623889-71623908 None:intergenic 20.0%
!!! AATATTTGTTGTTACTCATA+AGG + chr6_2:71623903-71623922 Msa0927320:intron 20.0%
!! AAAATACACCAAAAAAGTTT+AGG - chr6_2:71624144-71624163 None:intergenic 20.0%
!! ACTACATTGCTTAATTTAAA+AGG + chr6_2:71624364-71624383 Msa0927320:intron 20.0%
!!! TTAATTAGTTTTATCAGGAA+TGG + chr6_2:71624481-71624500 Msa0927320:intron 20.0%
!! ACTAAAAAAGATGAAAGAAA+TGG - chr6_2:71624569-71624588 None:intergenic 20.0%
!!! GTTTTTTTCCTTCTTATTTT+AGG + chr6_2:71624666-71624685 Msa0927320:intron 20.0%
!!! AATTTTTCTTAGACTTCTAT+TGG + chr6_2:71624791-71624810 Msa0927320:three_prime_UTR 20.0%
!! TAGTAGAAATTAGAATTAGT+TGG + chr6_2:71624836-71624855 Msa0927320:three_prime_UTR 20.0%
!!! AGGCTTTTTATTATGTTTTT+TGG + chr6_2:71625392-71625411 Msa0927320:three_prime_UTR 20.0%
!!! GGCTTTTTATTATGTTTTTT+GGG + chr6_2:71625393-71625412 Msa0927320:three_prime_UTR 20.0%
!!! TTTTTATTATGTTTTTTGGG+TGG + chr6_2:71625396-71625415 Msa0927320:three_prime_UTR 20.0%
!!! CAATAATTAGACTCTTTTTT+TGG - chr6_2:71625544-71625563 None:intergenic 20.0%
!! CAAAAAAAGAGTCTAATTAT+TGG + chr6_2:71625542-71625561 Msa0927320:three_prime_UTR 20.0%
!! ACAAAACATATTCATGTAAT+AGG - chr6_2:71625606-71625625 None:intergenic 20.0%
!!! AAAAGCATTTTTTTTTCAAG+AGG - chr6_2:71625641-71625660 None:intergenic 20.0%
!! AAACATAATTAAACAGGAAA+AGG - chr6_2:71625937-71625956 None:intergenic 20.0%
!! AAATAAATAAACAGTTTGTG+AGG - chr6_2:71625970-71625989 None:intergenic 20.0%
! TTAATTAAAGGAAAGAGTAG+TGG - chr6_2:71620829-71620848 None:intergenic 25.0%
!!! TTTGTTTTTAGGGTTTTTGA+TGG + chr6_2:71620907-71620926 Msa0927320:intron 25.0%
!!! TTGTTTTTAGGGTTTTTGAT+GGG + chr6_2:71620908-71620927 Msa0927320:intron 25.0%
!!! AACTCATTTCTAGAGTAATA+TGG + chr6_2:71620974-71620993 Msa0927320:intron 25.0%
!!! AGTCTTTGAAATTTCTAACT+AGG + chr6_2:71621001-71621020 Msa0927320:intron 25.0%
!! GTTTAGTTAAAGAGTTGTTT+TGG + chr6_2:71621082-71621101 Msa0927320:intron 25.0%
! AGTATTGTTCTTAACTTTGT+TGG - chr6_2:71621355-71621374 None:intergenic 25.0%
!! TGTTTCATTTGAAAAGTATG+AGG + chr6_2:71621687-71621706 Msa0927320:intron 25.0%
!!! CTGAATGTATTCTTTTTTTC+CGG + chr6_2:71621842-71621861 Msa0927320:intron 25.0%
!! TTTGTTTGTACGTATGTTTT+TGG + chr6_2:71621913-71621932 Msa0927320:intron 25.0%
! GTTTAGAAGGAATGAAATTT+AGG - chr6_2:71622102-71622121 None:intergenic 25.0%
!!! CTTTTTTTAATTCAAGCTTG+AGG + chr6_2:71622290-71622309 Msa0927320:intron 25.0%
! TTAACACACATCAAAATAGT+TGG - chr6_2:71622368-71622387 None:intergenic 25.0%
! AATTCTATTGATCCAAAAGA+GGG - chr6_2:71622577-71622596 None:intergenic 25.0%
! ATAAGAACTTCGTTAGATAT+GGG - chr6_2:71622658-71622677 None:intergenic 25.0%
! GAGATAAGTTACATAAACAA+AGG - chr6_2:71622808-71622827 None:intergenic 25.0%
!!! CGATTCAGTTTGATTTTATT+AGG + chr6_2:71623207-71623226 Msa0927320:intron 25.0%
! AAATTTGTCGCTAATCAAAT+GGG - chr6_2:71623367-71623386 None:intergenic 25.0%
!! CAAAATTCTCCAAGTTATTT+TGG - chr6_2:71623457-71623476 None:intergenic 25.0%
! AGTGAACTTATTCAAAGTAA+GGG + chr6_2:71623522-71623541 Msa0927320:intron 25.0%
! CTTCAAAGGTTTAAATCAAT+AGG - chr6_2:71623728-71623747 None:intergenic 25.0%
! TATAGATGATTGCAAACAAT+TGG - chr6_2:71623779-71623798 None:intergenic 25.0%
!!! TAAATGTGCCTAAACTTTTT+TGG + chr6_2:71624133-71624152 Msa0927320:intron 25.0%
!! GAAGCCTTTATCAATTTTTA+TGG + chr6_2:71624316-71624335 Msa0927320:intron 25.0%
! AACGCCATAAAAATTGATAA+AGG - chr6_2:71624323-71624342 None:intergenic 25.0%
! AAAAAAGATGAAAGAAATGG+TGG - chr6_2:71624566-71624585 None:intergenic 25.0%
! TATTTATGAAGTTTGTGTTG+TGG + chr6_2:71624644-71624663 Msa0927320:intron 25.0%
!! ACAGGTTTCTAAATTTCTTT+TGG + chr6_2:71624765-71624784 Msa0927320:three_prime_UTR 25.0%
! CATTCATAAAACAAAAAAGC+CGG - chr6_2:71625200-71625219 None:intergenic 25.0%
!!! CTTTTTTGTTTTATGAATGG+CGG + chr6_2:71625201-71625220 Msa0927320:three_prime_UTR 25.0%
!! TTGAAAGGCATAATGTTAAT+TGG + chr6_2:71625875-71625894 Msa0927320:three_prime_UTR 25.0%
! ATTGTTTTCTTTCTGTCATG+TGG + chr6_2:71621024-71621043 Msa0927320:intron 30.0%
! GCATTTTCATTGGGAATTTA+AGG + chr6_2:71621143-71621162 Msa0927320:CDS 30.0%
TTCGGAATGATTTCATCAAT+TGG - chr6_2:71621172-71621191 None:intergenic 30.0%
TTCATGGAAGAACAAAAAGA+TGG + chr6_2:71621241-71621260 Msa0927320:CDS 30.0%
! CATAAAAATGTAACTTGCAC+AGG + chr6_2:71621410-71621429 Msa0927320:intron 30.0%
TTCAATGCATGTTCTTACTA+TGG - chr6_2:71621549-71621568 None:intergenic 30.0%
! AAATGTATTGACCTGAATCA+TGG - chr6_2:71621612-71621631 None:intergenic 30.0%
! GATTCAGGTCAATACATTTT+AGG + chr6_2:71621613-71621632 Msa0927320:intron 30.0%
! TGAAGATCCATTTCTTCTTT+TGG + chr6_2:71621804-71621823 Msa0927320:intron 30.0%
! AGAATACATTCAGGTTTGTA+TGG - chr6_2:71621835-71621854 None:intergenic 30.0%
CGGAAAAAAAGAATACATTC+AGG - chr6_2:71621844-71621863 None:intergenic 30.0%
TTGGAAAATAGTGTGTTATG+TGG + chr6_2:71621932-71621951 Msa0927320:intron 30.0%
!!! TATATCACTTTTTTCGGCTT+TGG + chr6_2:71621987-71622006 Msa0927320:intron 30.0%
ATTTCCAACTCTTTAGTTGA+TGG + chr6_2:71622130-71622149 Msa0927320:intron 30.0%
ATATCCATCAACTAAAGAGT+TGG - chr6_2:71622137-71622156 None:intergenic 30.0%
!! GGAGGCATTAATAATGAATT+TGG - chr6_2:71622408-71622427 None:intergenic 30.0%
TAGAGAGAAAAATTATGAGG+AGG - chr6_2:71622426-71622445 None:intergenic 30.0%
!! GTTTCTATTTTTCCCTCTTT+TGG + chr6_2:71622562-71622581 Msa0927320:intron 30.0%
GAATTCTATTGATCCAAAAG+AGG - chr6_2:71622578-71622597 None:intergenic 30.0%
CATAAGAACTTCGTTAGATA+TGG - chr6_2:71622659-71622678 None:intergenic 30.0%
! TTGACTTTTACGGTTATGAA+AGG + chr6_2:71622875-71622894 Msa0927320:intron 30.0%
GAATATTTACAAGTGTTTGC+TGG + chr6_2:71622949-71622968 Msa0927320:intron 30.0%
! ATGCAATTGATTCCTCTAAA+TGG - chr6_2:71623000-71623019 None:intergenic 30.0%
CAAATTTGTCGCTAATCAAA+TGG - chr6_2:71623368-71623387 None:intergenic 30.0%
ACATATATGTTGTCAGATGT+AGG + chr6_2:71623424-71623443 Msa0927320:intron 30.0%
GAGTGAACTTATTCAAAGTA+AGG + chr6_2:71623521-71623540 Msa0927320:intron 30.0%
! ATGTCAATGTGTTCGATTTT+TGG + chr6_2:71623545-71623564 Msa0927320:intron 30.0%
!!! GTTCGATTTTTGGTGTTATT+TGG + chr6_2:71623555-71623574 Msa0927320:intron 30.0%
CGCTATTTATGAAACTTCAA+AGG - chr6_2:71623742-71623761 None:intergenic 30.0%
! GATACTAGATAACTTTTGCT+TGG + chr6_2:71623841-71623860 Msa0927320:intron 30.0%
!! CATTATTTAGTTTGTGCCTT+AGG - chr6_2:71624187-71624206 None:intergenic 30.0%
ATTTCGATATTTGCTTCTGT+TGG - chr6_2:71624293-71624312 None:intergenic 30.0%
!!! TTTCCTTCTTATTTTAGGGA+TGG + chr6_2:71624671-71624690 Msa0927320:intron 30.0%
TTGAGTTCATATGTTGAAGA+TGG + chr6_2:71624708-71624727 Msa0927320:CDS 30.0%
TACATATGCAATAACAGACA+CGG - chr6_2:71624988-71625007 None:intergenic 30.0%
TGCTTCTTATAATCAAGTCT+AGG + chr6_2:71625115-71625134 Msa0927320:three_prime_UTR 30.0%
!!! CGGCTTTTTTGTTTTATGAA+TGG + chr6_2:71625198-71625217 Msa0927320:three_prime_UTR 30.0%
!! GTTTCTGTTTCTGCAATTTA+CGG + chr6_2:71625321-71625340 Msa0927320:three_prime_UTR 30.0%
!!! TGTTTTTTGGGTGGATTATA+AGG + chr6_2:71625405-71625424 Msa0927320:three_prime_UTR 30.0%
!!! GTTTTTTGGGTGGATTATAA+GGG + chr6_2:71625406-71625425 Msa0927320:three_prime_UTR 30.0%
CACGAAAAGGAAAATTCAAA+AGG - chr6_2:71625463-71625482 None:intergenic 30.0%
AAAGTTCAAGTAGTATCGTT+AGG + chr6_2:71625570-71625589 Msa0927320:three_prime_UTR 30.0%
! TTCATGTAATAGGTTGACAT+TGG - chr6_2:71625596-71625615 None:intergenic 30.0%
CACTAAGAATCTTATGTGTT+TGG - chr6_2:71625681-71625700 None:intergenic 30.0%
! TTGGTAAGTTCAAGTTTGAT+TGG + chr6_2:71625894-71625913 Msa0927320:intron 30.0%
CATATGTTGATGTCTCTATT+CGG + chr6_2:71626029-71626048 Msa0927320:three_prime_UTR 30.0%
ATGGCTTCTTTCTCTTTATC+CGG - chr6_2:71620597-71620616 None:intergenic 35.0%
GTTGAGATTGCAAATTTCGA+TGG - chr6_2:71620616-71620635 None:intergenic 35.0%
TCGAAATTTGCAATCTCAAC+TGG + chr6_2:71620616-71620635 Msa0927320:CDS 35.0%
ACACACTAATGCTGCTAATT+TGG + chr6_2:71621056-71621075 Msa0927320:intron 35.0%
!!! TTGTTTTGGTTTCGACACTA+CGG + chr6_2:71621096-71621115 Msa0927320:CDS 35.0%
TGATGAAATCATTCCGAAGT+TGG + chr6_2:71621174-71621193 Msa0927320:CDS 35.0%
AGAAGTTGTCTTATGGTTCA+TGG + chr6_2:71621225-71621244 Msa0927320:CDS 35.0%
AAAAGATGGCATTACCAAAC+AGG + chr6_2:71621255-71621274 Msa0927320:CDS 35.0%
GCAAGAAAATAAAATGGCCA+AGG - chr6_2:71621304-71621323 None:intergenic 35.0%
GAACAATACTTCACTCCAAT+AGG + chr6_2:71621365-71621384 Msa0927320:intron 35.0%
GTATGTACCACATGTAAGAA+CGG - chr6_2:71621493-71621512 None:intergenic 35.0%
CACTTCAAAAACCATGATTC+AGG + chr6_2:71621598-71621617 Msa0927320:intron 35.0%
! GTTTTCCATGCTGTTACATT+TGG + chr6_2:71621890-71621909 Msa0927320:intron 35.0%
ACAAACCAAATGTAACAGCA+TGG - chr6_2:71621898-71621917 None:intergenic 35.0%
! CAAGTATTTGAGTTCTCTTG+AGG + chr6_2:71622158-71622177 Msa0927320:intron 35.0%
TCTTGAGGTTGAAGATAACA+AGG + chr6_2:71622173-71622192 Msa0927320:intron 35.0%
TGTATTACATCCTCACTGAT+GGG - chr6_2:71622223-71622242 None:intergenic 35.0%
ATGTATTACATCCTCACTGA+TGG - chr6_2:71622224-71622243 None:intergenic 35.0%
TGAATAGTCCCTTTCACTAT+AGG - chr6_2:71622472-71622491 None:intergenic 35.0%
! GAATTCGTGTTGTTCAAAGT+AGG + chr6_2:71622592-71622611 Msa0927320:intron 35.0%
CTAACGAAGTTCTTATGTGT+TGG + chr6_2:71622662-71622681 Msa0927320:intron 35.0%
AAAGGAATTCACTTCACTCT+TGG + chr6_2:71622893-71622912 Msa0927320:intron 35.0%
CTACATGGCATAAAACTTCA+TGG - chr6_2:71623122-71623141 None:intergenic 35.0%
GGAGAAGAATACTATCTGTT+AGG - chr6_2:71623235-71623254 None:intergenic 35.0%
CTTGATCAGCTAAACTTTCT+TGG - chr6_2:71623256-71623275 None:intergenic 35.0%
AAGCATAGTTTGAACACGTA+AGG + chr6_2:71623317-71623336 Msa0927320:intron 35.0%
! CAGTTTCTCCTTTCTCTTTT+TGG + chr6_2:71623340-71623359 Msa0927320:intron 35.0%
AAATGGGTCCAAAAAGAGAA+AGG - chr6_2:71623351-71623370 None:intergenic 35.0%
GGTAAATGCCCAAAATAACT+TGG + chr6_2:71623445-71623464 Msa0927320:intron 35.0%
!! AAGCATTGAGATTGAGTTGT+AGG + chr6_2:71623647-71623666 Msa0927320:intron 35.0%
TATCCTAAATAATCTGGCAC+AGG - chr6_2:71623676-71623695 None:intergenic 35.0%
! CAATAGGTTGAGAAAACATG+TGG - chr6_2:71623712-71623731 None:intergenic 35.0%
TTGTTACTCATAAGGTCCTT+TGG + chr6_2:71623911-71623930 Msa0927320:intron 35.0%
GCATTCTAAACAATTGCCAA+AGG - chr6_2:71623930-71623949 None:intergenic 35.0%
TTCCTTTATTCAAGTGCACT+CGG - chr6_2:71624009-71624028 None:intergenic 35.0%
GCTTGAAAGAAAATGTCAGT+TGG - chr6_2:71624093-71624112 None:intergenic 35.0%
! GTAGTTGCAACATCTTTTCA+CGG - chr6_2:71624349-71624368 None:intergenic 35.0%
CTTCTATTTCGGTACTATAG+AGG + chr6_2:71624440-71624459 Msa0927320:intron 35.0%
!!! TTATTTTAGGGATGGTGGTT+TGG + chr6_2:71624679-71624698 Msa0927320:intron 35.0%
AGTTCATATGTTGAAGATGG+TGG + chr6_2:71624711-71624730 Msa0927320:CDS 35.0%
TAATCAAGTCTAGGAGTTAG+TGG + chr6_2:71625124-71625143 Msa0927320:three_prime_UTR 35.0%
!!! TTTTGTTTTATGAATGGCGG+TGG + chr6_2:71625204-71625223 Msa0927320:three_prime_UTR 35.0%
!!! TATTTTTTGCTTCCTCCATG+CGG + chr6_2:71625353-71625372 Msa0927320:three_prime_UTR 35.0%
!! GATTATAAGGGTTTGGCTTT+GGG + chr6_2:71625418-71625437 Msa0927320:three_prime_UTR 35.0%
!! ATTATAAGGGTTTGGCTTTG+GGG + chr6_2:71625419-71625438 Msa0927320:three_prime_UTR 35.0%
TGAATTTACCTGCAGAAAGA+CGG - chr6_2:71625775-71625794 None:intergenic 35.0%
CGAATAGAGACATCAACATA+TGG - chr6_2:71626031-71626050 None:intergenic 35.0%
AGAATGGAGGCAAGAGAAAA+GGG - chr6_2:71620505-71620524 None:intergenic 40.0%
TTCTTTCTCTTTATCCGGAG+TGG - chr6_2:71620592-71620611 None:intergenic 40.0%
!! GGAGAAGCTTTGTTGATGAA+GGG - chr6_2:71620663-71620682 None:intergenic 40.0%
! GTTTTCTTTCTGTCATGTGG+TGG + chr6_2:71621027-71621046 Msa0927320:intron 40.0%
ACTACGGATGTTAGTGCATT+TGG + chr6_2:71621112-71621131 Msa0927320:CDS 40.0%
! GATGTTAGTGCATTTGGTGA+CGG + chr6_2:71621118-71621137 Msa0927320:CDS 40.0%
GAGACTTTCTTCTCCAACTT+CGG - chr6_2:71621190-71621209 None:intergenic 40.0%
CAGGTAGAGAAGTTGTCTTA+TGG + chr6_2:71621218-71621237 Msa0927320:CDS 40.0%
! CTGCAATGAATTTGAGACCT+TGG + chr6_2:71621284-71621303 Msa0927320:intron 40.0%
CATGAAACCGTTCTTACATG+TGG + chr6_2:71621483-71621502 Msa0927320:intron 40.0%
GGTGCAACCAAAAGAAGAAA+TGG - chr6_2:71621814-71621833 None:intergenic 40.0%
! TTATGTGGAAGTGTGTACGA+AGG + chr6_2:71621947-71621966 Msa0927320:intron 40.0%
!! TCTCTCTATAAGGGTGTTCT+AGG + chr6_2:71622438-71622457 Msa0927320:intron 40.0%
AAGCACGTCCTATAGTGAAA+GGG + chr6_2:71622461-71622480 Msa0927320:intron 40.0%
! CGTGTTGTTCAAAGTAGGTT+TGG + chr6_2:71622597-71622616 Msa0927320:intron 40.0%
TGATGCCTGATCATGAATCT+CGG + chr6_2:71623590-71623609 Msa0927320:intron 40.0%
TTGAACCGAGATTCATGATC+AGG - chr6_2:71623598-71623617 None:intergenic 40.0%
AGTCCTGTGCCAGATTATTT+AGG + chr6_2:71623670-71623689 Msa0927320:intron 40.0%
GAGAAAAATGTCCTTCCACT+AGG + chr6_2:71623863-71623882 Msa0927320:intron 40.0%
GGCACATTTAACAATGAGCA+GGG - chr6_2:71624123-71624142 None:intergenic 40.0%
AGGCACATTTAACAATGAGC+AGG - chr6_2:71624124-71624143 None:intergenic 40.0%
TCAAGACATGACTGCATTAC+AGG + chr6_2:71624233-71624252 Msa0927320:intron 40.0%
CTATTTCGGTACTATAGAGG+TGG + chr6_2:71624443-71624462 Msa0927320:intron 40.0%
TGTAACGACTTAGTTTCTGC+AGG + chr6_2:71624526-71624545 Msa0927320:intron 40.0%
GTAACGACTTAGTTTCTGCA+GGG + chr6_2:71624527-71624546 Msa0927320:intron 40.0%
CCACCATCCCTAAAATAAGA+AGG - chr6_2:71624677-71624696 None:intergenic 40.0%
!!! CCTTCTTATTTTAGGGATGG+TGG + chr6_2:71624674-71624693 Msa0927320:intron 40.0%
CATGAGCATGTAGCTATAGT+TGG - chr6_2:71624915-71624934 None:intergenic 40.0%
ATAAGGCAGTTTGATCTTCG+TGG - chr6_2:71625091-71625110 None:intergenic 40.0%
GGAGTTAGTGGAGGATATTA+AGG + chr6_2:71625136-71625155 Msa0927320:three_prime_UTR 40.0%
AGTGGAGGATATTAAGGTGT+TGG + chr6_2:71625142-71625161 Msa0927320:three_prime_UTR 40.0%
!!! TTTTTTGCGACTTCAGGTTG+AGG + chr6_2:71625263-71625282 Msa0927320:three_prime_UTR 40.0%
!! TTGGGTGGATTATAAGGGTT+TGG + chr6_2:71625411-71625430 Msa0927320:three_prime_UTR 40.0%
! GGATTATAAGGGTTTGGCTT+TGG + chr6_2:71625417-71625436 Msa0927320:three_prime_UTR 40.0%
AGATGCACAACTAAAGCTCA+CGG - chr6_2:71625487-71625506 None:intergenic 40.0%
GAATTTACCTGCAGAAAGAC+GGG - chr6_2:71625774-71625793 None:intergenic 40.0%
TGCAGGTAAATTCAGTCTGT+AGG + chr6_2:71625781-71625800 Msa0927320:three_prime_UTR 40.0%
! TCTTTTGCTGCTAATCCGTT+TGG + chr6_2:71625848-71625867 Msa0927320:three_prime_UTR 40.0%
! AATCCGTTTGGTGACTTGAA+AGG + chr6_2:71625860-71625879 Msa0927320:three_prime_UTR 40.0%
! ATGCCTTTCAAGTCACCAAA+CGG - chr6_2:71625866-71625885 None:intergenic 40.0%
AGAGAAAGAGAGAGAGAGGA+GGG - chr6_2:71620463-71620482 None:intergenic 45.0%
TAGAGAAAGAGAGAGAGAGG+AGG - chr6_2:71620464-71620483 None:intergenic 45.0%
TGGTAGAGAAAGAGAGAGAG+AGG - chr6_2:71620467-71620486 None:intergenic 45.0%
AATGGAGGCAAGAGAAAAGG+GGG - chr6_2:71620503-71620522 None:intergenic 45.0%
GAATGGAGGCAAGAGAAAAG+GGG - chr6_2:71620504-71620523 None:intergenic 45.0%
GAGAATGGAGGCAAGAGAAA+AGG - chr6_2:71620506-71620525 None:intergenic 45.0%
!! GGGAGAAGCTTTGTTGATGA+AGG - chr6_2:71620664-71620683 None:intergenic 45.0%
! GATGTCTGAGATTCAGCAAC+GGG - chr6_2:71620684-71620703 None:intergenic 45.0%
! GGATGTCTGAGATTCAGCAA+CGG - chr6_2:71620685-71620704 None:intergenic 45.0%
GAGAAACGTACGATGTAGCT+TGG - chr6_2:71620730-71620749 None:intergenic 45.0%
ATCGTACGTTTCTCTCTCTC+TGG + chr6_2:71620736-71620755 Msa0927320:intron 45.0%
GAAGAAGAAGATGAGAGCAG+CGG - chr6_2:71620784-71620803 None:intergenic 45.0%
!!! GTGACGGAGGCATTTTCATT+GGG + chr6_2:71621134-71621153 Msa0927320:CDS 45.0%
AACTTCTCTACCTGCTGCAT+CGG - chr6_2:71621212-71621231 None:intergenic 45.0%
!! CATTGCAGAGAGTACCTGTT+TGG - chr6_2:71621272-71621291 None:intergenic 45.0%
ATCTGATTCACCCATCAGTG+AGG + chr6_2:71622210-71622229 Msa0927320:intron 45.0%
TCAAGCTTGAGGAGCTTATG+CGG + chr6_2:71622301-71622320 Msa0927320:intron 45.0%
GAAGCACGTCCTATAGTGAA+AGG + chr6_2:71622460-71622479 Msa0927320:intron 45.0%
! GTTTCATGGCAAGAAAGTGC+TGG + chr6_2:71622839-71622858 Msa0927320:intron 45.0%
!! AAAGCTATCGATTGGCCTAG+TGG - chr6_2:71623881-71623900 None:intergenic 45.0%
TGCCGAGTGCACTTGAATAA+AGG + chr6_2:71624004-71624023 Msa0927320:intron 45.0%
! GGAGTGATGCATTGATGAGA+AGG + chr6_2:71624732-71624751 Msa0927320:exon 45.0%
TCAAGTCTAGGAGTTAGTGG+AGG + chr6_2:71625127-71625146 Msa0927320:three_prime_UTR 45.0%
!! AGGATATTAAGGTGTTGGCG+TGG + chr6_2:71625147-71625166 Msa0927320:three_prime_UTR 45.0%
! TTTGAGCAGTTTGAGTTCGC+CGG + chr6_2:71625178-71625197 Msa0927320:three_prime_UTR 45.0%
ACTTCCCCTTTACCGCAAAA+GGG - chr6_2:71625244-71625263 None:intergenic 45.0%
AACTTCCCCTTTACCGCAAA+AGG - chr6_2:71625245-71625264 None:intergenic 45.0%
!!! GGGAAGTTTTTTGCGACTTC+AGG + chr6_2:71625257-71625276 Msa0927320:three_prime_UTR 45.0%
!! CGTCTGCTGTTTCTGTTTGT+TGG + chr6_2:71625299-71625318 Msa0927320:three_prime_UTR 45.0%
GATGCACAACTAAAGCTCAC+GGG - chr6_2:71625486-71625505 None:intergenic 45.0%
ACAACCAATAGGAATCGGTC+AGG - chr6_2:71625750-71625769 None:intergenic 45.0%
CGGGAACAACCAATAGGAAT+CGG - chr6_2:71625755-71625774 None:intergenic 45.0%
GAAAGACGGGAACAACCAAT+AGG - chr6_2:71625761-71625780 None:intergenic 45.0%
TCATCAGTGCGTGTTTCACT+TGG - chr6_2:71625825-71625844 None:intergenic 45.0%
! AGAGAGAGGAGGGTTAGTGA+AGG - chr6_2:71620453-71620472 None:intergenic 50.0%
AAGGGGGTGGAGATGGAAAA+TGG - chr6_2:71620487-71620506 None:intergenic 50.0%
AAGAGAAAAGGGGGTGGAGA+TGG - chr6_2:71620494-71620513 None:intergenic 50.0%
!! TAGTTCTGGCGATGGGAGAA+TGG - chr6_2:71620521-71620540 None:intergenic 50.0%
TCCCATCGCCAGAACTATTG+CGG + chr6_2:71620524-71620543 Msa0927320:CDS 50.0%
!! TCCGCAATAGTTCTGGCGAT+GGG - chr6_2:71620528-71620547 None:intergenic 50.0%
TTCTCTTTATCCGGAGTGGC+AGG - chr6_2:71620588-71620607 None:intergenic 50.0%
CATTATGCTCAAGCTCCCTC+CGG + chr6_2:71620704-71620723 Msa0927320:intron 50.0%
AACGTACGATGTAGCTTGGC+CGG - chr6_2:71620726-71620745 None:intergenic 50.0%
!! GTTAGTGCATTTGGTGACGG+AGG + chr6_2:71621121-71621140 Msa0927320:CDS 50.0%
!!! GGTGACGGAGGCATTTTCAT+TGG + chr6_2:71621133-71621152 Msa0927320:CDS 50.0%
AAGAAAGTCTCCGATGCAGC+AGG + chr6_2:71621199-71621218 Msa0927320:CDS 50.0%
CTCGGTCAAGTGACGTTTCA+TGG + chr6_2:71622825-71622844 Msa0927320:intron 50.0%
!! CTATCGATTGGCCTAGTGGA+AGG - chr6_2:71623877-71623896 None:intergenic 50.0%
! TTTAGGGATGGTGGTTTGGC+TGG + chr6_2:71624683-71624702 Msa0927320:intron 50.0%
! TTAGGGATGGTGGTTTGGCT+GGG + chr6_2:71624684-71624703 Msa0927320:intron 50.0%
! TGAGAAGGTCATGCGTTGAC+AGG + chr6_2:71624747-71624766 Msa0927320:three_prime_UTR 50.0%
!! TTAAGGTGTTGGCGTGGAGT+TGG + chr6_2:71625153-71625172 Msa0927320:three_prime_UTR 50.0%
!!! CCGCAAAAGGGCACTCTTTT+GGG - chr6_2:71625232-71625251 None:intergenic 50.0%
!!! CCCAAAAGAGTGCCCTTTTG+CGG + chr6_2:71625229-71625248 Msa0927320:three_prime_UTR 50.0%
!!! ACCGCAAAAGGGCACTCTTT+TGG - chr6_2:71625233-71625252 None:intergenic 50.0%
!! AGAGTGCCCTTTTGCGGTAA+AGG + chr6_2:71625235-71625254 Msa0927320:three_prime_UTR 50.0%
! GAGTGCCCTTTTGCGGTAAA+GGG + chr6_2:71625236-71625255 Msa0927320:three_prime_UTR 50.0%
! AGTGCCCTTTTGCGGTAAAG+GGG + chr6_2:71625237-71625256 Msa0927320:three_prime_UTR 50.0%
TAAAGCTCACGGGCACGAAA+AGG - chr6_2:71625476-71625495 None:intergenic 50.0%
! GTGTCCTGACCGATTCCTAT+TGG + chr6_2:71625743-71625762 Msa0927320:three_prime_UTR 50.0%
TTCTGGCGATGGGAGAATGG+AGG - chr6_2:71620518-71620537 None:intergenic 55.0%
!! CTCCGCAATAGTTCTGGCGA+TGG - chr6_2:71620529-71620548 None:intergenic 55.0%
GCGGATCTCCGCAATAGTTC+TGG - chr6_2:71620535-71620554 None:intergenic 55.0%
!! GGGTGATGGTGGTGATATGG+CGG - chr6_2:71620554-71620573 None:intergenic 55.0%
TATCCGGAGTGGCAGGTTTC+TGG - chr6_2:71620581-71620600 None:intergenic 55.0%
CGGAGGGAGCTTGAGCATAA+TGG - chr6_2:71620706-71620725 None:intergenic 55.0%
TACGATGTAGCTTGGCCGGA+GGG - chr6_2:71620722-71620741 None:intergenic 55.0%
GAAGAAGATGAGAGCAGCGG+AGG - chr6_2:71620781-71620800 None:intergenic 55.0%
!! TTGCGACTTCAGGTTGAGGC+TGG + chr6_2:71625267-71625286 Msa0927320:three_prime_UTR 55.0%
!! TGCGACTTCAGGTTGAGGCT+GGG + chr6_2:71625268-71625287 Msa0927320:three_prime_UTR 55.0%
ACAGCAAACAGACCGCATGG+AGG - chr6_2:71625368-71625387 None:intergenic 55.0%
CTGACAGCAAACAGACCGCA+TGG - chr6_2:71625371-71625390 None:intergenic 55.0%
GGTTGTTCCCGTCTTTCTGC+AGG + chr6_2:71625764-71625783 Msa0927320:three_prime_UTR 55.0%
GGAGGCAAGAGAAAAGGGGG+TGG - chr6_2:71620500-71620519 None:intergenic 60.0%
!! GGCGGGTGATGGTGGTGATA+TGG - chr6_2:71620557-71620576 None:intergenic 60.0%
GTACGATGTAGCTTGGCCGG+AGG - chr6_2:71620723-71620742 None:intergenic 60.0%
ATGAGAGCAGCGGAGGAGAG+AGG - chr6_2:71620774-71620793 None:intergenic 60.0%
!! GCGACTTCAGGTTGAGGCTG+GGG + chr6_2:71625269-71625288 Msa0927320:three_prime_UTR 60.0%
! CAGGTTGAGGCTGGGGTATG+CGG + chr6_2:71625276-71625295 Msa0927320:three_prime_UTR 60.0%
!! GCGGTCTGTTTGCTGTCAGC+AGG + chr6_2:71625372-71625391 Msa0927320:three_prime_UTR 60.0%
! TTTCTGGCGGCGGGTGATGG+TGG - chr6_2:71620565-71620584 None:intergenic 65.0%
!! AGGTTTCTGGCGGCGGGTGA+TGG - chr6_2:71620568-71620587 None:intergenic 65.0%
!! AGTGGCAGGTTTCTGGCGGC+GGG - chr6_2:71620574-71620593 None:intergenic 65.0%
!! GAGTGGCAGGTTTCTGGCGG+CGG - chr6_2:71620575-71620594 None:intergenic 65.0%
! CCGGAGTGGCAGGTTTCTGG+CGG - chr6_2:71620578-71620597 None:intergenic 65.0%
CCGCCAGAAACCTGCCACTC+CGG + chr6_2:71620575-71620594 Msa0927320:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 71620447 71626069 71620447 ID=Msa0927320;Name=Msa0927320
chr6_2 mRNA 71620447 71626069 71620447 ID=Msa0927320-mRNA-1;Parent=Msa0927320;Name=Msa0927320-mRNA-1;_AED=0.34;_eAED=0.35;_QI=0|0.2|0.33|1|0|0|6|1212|163
chr6_2 exon 71620447 71620683 71620447 ID=Msa0927320-mRNA-1:exon:11962;Parent=Msa0927320-mRNA-1
chr6_2 exon 71621094 71621276 71621094 ID=Msa0927320-mRNA-1:exon:11963;Parent=Msa0927320-mRNA-1
chr6_2 exon 71621544 71621550 71621544 ID=Msa0927320-mRNA-1:exon:11964;Parent=Msa0927320-mRNA-1
chr6_2 exon 71623440 71623445 71623440 ID=Msa0927320-mRNA-1:exon:11965;Parent=Msa0927320-mRNA-1
chr6_2 exon 71624688 71625896 71624688 ID=Msa0927320-mRNA-1:exon:11966;Parent=Msa0927320-mRNA-1
chr6_2 exon 71626008 71626069 71626008 ID=Msa0927320-mRNA-1:exon:11967;Parent=Msa0927320-mRNA-1
chr6_2 CDS 71620447 71620683 71620447 ID=Msa0927320-mRNA-1:cds;Parent=Msa0927320-mRNA-1
chr6_2 CDS 71621094 71621276 71621094 ID=Msa0927320-mRNA-1:cds;Parent=Msa0927320-mRNA-1
chr6_2 CDS 71621544 71621550 71621544 ID=Msa0927320-mRNA-1:cds;Parent=Msa0927320-mRNA-1
chr6_2 CDS 71623440 71623445 71623440 ID=Msa0927320-mRNA-1:cds;Parent=Msa0927320-mRNA-1
chr6_2 CDS 71624688 71624746 71624688 ID=Msa0927320-mRNA-1:cds;Parent=Msa0927320-mRNA-1
chr6_2 three_prime_UTR 71624747 71625896 71624747 ID=Msa0927320-mRNA-1:three_prime_utr;Parent=Msa0927320-mRNA-1
chr6_2 three_prime_UTR 71626008 71626069 71626008 ID=Msa0927320-mRNA-1:three_prime_utr;Parent=Msa0927320-mRNA-1
Gene Sequence

>Msa0927320

TTTCCTTCACTAACCCTCCTCTCTCTCTCTTTCTCTACCATTTTCCATCTCCACCCCCTTTTCTCTTGCCTCCATTCTCCCATCGCCAGAACTATTGCGGAGATCCGCCATATCACCACCATCACCCGCCGCCAGAAACCTGCCACTCCGGATAAAGAGAAAGAAGCCATCGAAATTTGCAATCTCAACTGGAAGCTCATGTCGTTGCTCTCTCCCTTCATCAACAAAGCTTCTCCCAGTTGTTTTGGTTTCGACACTACGGATGTTAGTGCATTTGGTGACGGAGGCATTTTCATTGGGAATTTAAGGAGACCAATTGATGAAATCATTCCGAAGTTGGAGAAGAAAGTCTCCGATGCAGCAGGTAGAGAAGTTGTCTTATGGTTCATGGAAGAACAAAAAGATGGCATTACCAAACAGAACCATAATGTAGGGATGGTGGTTTGGCTGGGTTTGAGTTCATATGTTGAAGATGGTGGAGTGATGCATTGA
Protein sequence

>Msa0927320

FPSLTLLSLSFSTIFHLHPLFSCLHSPIARTIAEIRHITTITRRQKPATPDKEKEAIEICNLNWKLMSLLSPFINKASPSCFGFDTTDVSAFGDGGIFIGNLRRPIDEIIPKLEKKVSDAAGREVVLWFMEEQKDGITKQNHNVGMVVWLGLSSYVEDGGVMH*