AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1287980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1287980 MtrunA17_Chr7g0252261 97.701 87 2 0 1 87 1 87 4.73e-53 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 118 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAACACAAAATCCCTTTA+TGG 0.117425 8_3:-39917641 None:intergenic
CACAAAACGAACTAGAAATT+TGG 0.119674 8_3:-39915122 None:intergenic
CATATTCTTCTTCGTCTTCT+TGG 0.157245 8_3:-39915192 None:intergenic
GAAACAGTTGCGGGAATTTC+AGG 0.209974 8_3:-39917130 None:intergenic
GAACTGATGTTGGAAATTTA+TGG 0.238625 8_3:+39919362 Msa1287980:three_prime_UTR
CAAATATCAAATCCCAAATT+AGG 0.264825 8_3:-39917615 None:intergenic
ACCTTCTATATTGATTCTAA+TGG 0.268685 8_3:+39918712 Msa1287980:three_prime_UTR
ATAGGGATAAAATGTGGTAT+AGG 0.322268 8_3:+39917778 Msa1287980:three_prime_UTR
TCAACAATTGGTTATTTGAT+TGG 0.328198 8_3:-39919189 None:intergenic
ACTGTTGTGTTATGTGGTAC+TGG 0.328590 8_3:+39917706 Msa1287980:three_prime_UTR
TCCTACAGATTACAATAATA+AGG 0.343571 8_3:-39919236 None:intergenic
TGGGGATAATTTATGTGATT+AGG 0.347979 8_3:+39917328 Msa1287980:three_prime_UTR
TACCTTCTCGTTGAAGTTGA+TGG 0.351373 8_3:-39918055 None:intergenic
TATTGTAATCTGTAGGATCT+TGG 0.354549 8_3:+39919242 Msa1287980:three_prime_UTR
GTTGCTATGTTGATTATCTC+TGG 0.357878 8_3:+39917559 Msa1287980:three_prime_UTR
TGAGAGCTTGTTTGTTCGTT+CGG 0.358040 8_3:-39915149 None:intergenic
TCCATTAGAATCAATATAGA+AGG 0.362709 8_3:-39918713 None:intergenic
AATTGGAGCTAATGGTTCAT+AGG 0.364849 8_3:+39919123 Msa1287980:three_prime_UTR
ATGGGAATTGATGAACCATT+AGG 0.365281 8_3:-39918036 None:intergenic
CTTCTCATAACATTTCTCTA+AGG 0.371148 8_3:-39917178 None:intergenic
ACAAAACGAACTAGAAATTT+GGG 0.374615 8_3:-39915121 None:intergenic
CTATATTGTTGTCGCTGCTT+TGG 0.376002 8_3:+39917492 Msa1287980:three_prime_UTR
TTTGATATTTGTAGCCATAA+AGG 0.379342 8_3:+39917627 Msa1287980:three_prime_UTR
TCAGGAAAATTCTCAACAAT+TGG 0.379819 8_3:-39919201 None:intergenic
TTCTTCTTCGTCTTCTTGGC+TGG 0.386657 8_3:-39915188 None:intergenic
TTGATATTTGTAGCCATAAA+GGG 0.391441 8_3:+39917628 Msa1287980:three_prime_UTR
CTGAAGGGAAGAAAGAATTC+AGG 0.392900 8_3:-39915365 None:intergenic
CAATTGTCCATCTACGATAC+TGG 0.393539 8_3:-39919105 None:intergenic
GAAGTGAATCAACCTGTTGC+TGG 0.394319 8_3:+39918888 Msa1287980:three_prime_UTR
GGATTTGATTCCAATCTTCT+CGG 0.397739 8_3:+39917373 Msa1287980:three_prime_UTR
ATGTTTATTGTTGTGTTTGA+AGG 0.403921 8_3:+39917280 Msa1287980:three_prime_UTR
AAACAAGTTTCAAGTTTCCT+AGG 0.408623 8_3:-39917958 None:intergenic
TGGGAATTGATGAACCATTA+GGG 0.409218 8_3:-39918035 None:intergenic
TAGGGATAAAATGTGGTATA+GGG 0.409761 8_3:+39917779 Msa1287980:three_prime_UTR
TCCATCAGCAAATCAATTCA+TGG 0.411547 8_3:+39918203 Msa1287980:three_prime_UTR
CTCTCTCCGCATCTCCCTCA+TGG 0.435359 8_3:+39915243 Msa1287980:CDS
GAATTCAGGGTGGATGGAAA+AGG 0.437093 8_3:-39915351 None:intergenic
AGCTTACTCAATATATCAAC+AGG 0.438055 8_3:+39917999 Msa1287980:three_prime_UTR
TTAACAGCTGAAACAGTTGC+GGG 0.439156 8_3:-39917139 None:intergenic
TTGGTCTGCAAGGTTATCTC+AGG 0.446970 8_3:+39917511 Msa1287980:three_prime_UTR
ATAAGGCTCAACATAAAATC+AGG 0.447278 8_3:-39919219 None:intergenic
GAAACTTGTTTACTCAATGA+AGG 0.447552 8_3:+39917970 Msa1287980:three_prime_UTR
AGGGATATAGCACACAGGTC+AGG 0.448220 8_3:+39917908 Msa1287980:intron
CAGGGTAATATTCCAGCAAC+AGG 0.452004 8_3:-39918900 None:intergenic
ATATAAACCTCCGAGAAGAT+TGG 0.453562 8_3:-39917383 None:intergenic
AGATGGACAATTGGAGCTAA+TGG 0.455094 8_3:+39919115 Msa1287980:three_prime_UTR
ACCTTCTCGTTGAAGTTGAT+GGG 0.460309 8_3:-39918054 None:intergenic
CTATAGAAAAGACTGGAACT+TGG 0.462140 8_3:+39918866 Msa1287980:three_prime_UTR
TGGAAGAAGGCGGTGGGATG+AGG 0.464315 8_3:-39915304 None:intergenic
GGTGGTTCCAGTATCGTAGA+TGG 0.467348 8_3:+39919098 Msa1287980:three_prime_UTR
ACTCCATCGTCAATCTGTAT+AGG 0.474676 8_3:-39918640 None:intergenic
AATTCAGGGTGGATGGAAAA+GGG 0.475500 8_3:-39915350 None:intergenic
ATTGTTACTGTTGTGTTATG+TGG 0.477623 8_3:+39917700 Msa1287980:three_prime_UTR
TAAATCAGTGTTATCTTACA+AGG 0.482499 8_3:-39919285 None:intergenic
TGGATGTGATTTCATCGAAC+GGG 0.483198 8_3:+39918732 Msa1287980:three_prime_UTR
GACGAAGAAGAATATGTTGA+GGG 0.491580 8_3:+39915199 Msa1287980:exon
CAGTATCGTAGATGGACAAT+TGG 0.492310 8_3:+39919106 Msa1287980:three_prime_UTR
AAAACATACACTAACATCAT+GGG 0.494562 8_3:-39919333 None:intergenic
TTCTTGTTTCAGATCGACCT+TGG 0.494988 8_3:+39919020 Msa1287980:intron
CTGTTGTGTTATGTGGTACT+GGG 0.496530 8_3:+39917707 Msa1287980:three_prime_UTR
AGATCTGCGTTGATCGGAGG+TGG 0.496546 8_3:-39915324 None:intergenic
AAATGTGGTATAGGGATACT+TGG 0.508414 8_3:+39917787 Msa1287980:three_prime_UTR
CTTGTTTACTCAATGAAGGA+AGG 0.509917 8_3:+39917974 Msa1287980:three_prime_UTR
CGTTGATCGGAGGTGGAAGA+AGG 0.521939 8_3:-39915317 None:intergenic
AGAACAGCAGTTACCTCTGA+AGG 0.522143 8_3:-39915381 None:intergenic
TCGGAGGTGGAAGAAGGCGG+TGG 0.523668 8_3:-39915311 None:intergenic
GATACATTTGAAGTAGGCCT+AGG 0.533479 8_3:+39917941 Msa1287980:three_prime_UTR
AAGAAAGAATTCAGGGTGGA+TGG 0.537345 8_3:-39915357 None:intergenic
GAGGTTCTTAGAGAGGAAAG+AGG 0.538078 8_3:-39915285 None:intergenic
TGAAGGGAAGAAAGAATTCA+GGG 0.541633 8_3:-39915364 None:intergenic
TATCTCTTAGGTAAATTCCA+AGG 0.542844 8_3:-39919037 None:intergenic
CAGAGTGATACATTTGAAGT+AGG 0.544829 8_3:+39917935 Msa1287980:three_prime_UTR
TCCATGAATTGATTTGCTGA+TGG 0.547508 8_3:-39918204 None:intergenic
TGATGGACTTCATGCACGAT+TGG 0.550950 8_3:-39918187 None:intergenic
GTTTGAAGTAGAATTGAAGA+TGG 0.551211 8_3:+39917439 Msa1287980:three_prime_UTR
AGACGAAGAAGAATATGTTG+AGG 0.552238 8_3:+39915198 Msa1287980:exon
CGGAGGTGGAAGAAGGCGGT+GGG 0.553191 8_3:-39915310 None:intergenic
GGGATATAGCACACAGGTCA+GGG 0.556945 8_3:+39917909 Msa1287980:intron
TGTCGCTGCTTTGGTCTGCA+AGG 0.561242 8_3:+39917501 Msa1287980:three_prime_UTR
CTTAGAGAGGAAAGAGGAGG+CGG 0.561712 8_3:-39915279 None:intergenic
GGGGTCAGATCTGCGTTGAT+CGG 0.562035 8_3:-39915330 None:intergenic
TTCGAGACTATAGAAAAGAC+TGG 0.564824 8_3:+39918859 Msa1287980:three_prime_UTR
TTTATGAATTTCATTATTTG+GGG 0.569988 8_3:+39917310 Msa1287980:three_prime_UTR
GAATTCTTTCTTCCCTTCAG+AGG 0.570684 8_3:+39915368 Msa1287980:CDS
TTTAACAGCTGAAACAGTTG+CGG 0.580567 8_3:-39917140 None:intergenic
TCCCATCAACTTCAACGAGA+AGG 0.581047 8_3:+39918053 Msa1287980:three_prime_UTR
TTGTTTACTCAATGAAGGAA+GGG 0.586682 8_3:+39917975 Msa1287980:three_prime_UTR
CAGACTACCAGACTGTTCAA+AGG 0.587564 8_3:+39918475 Msa1287980:intron
GCCTTATTATTGTAATCTGT+AGG 0.591084 8_3:+39919235 Msa1287980:three_prime_UTR
AATGACGCAGCAGTCAAGCA+TGG 0.597254 8_3:+39917217 Msa1287980:three_prime_UTR
ATGGATGTGATTTCATCGAA+CGG 0.598964 8_3:+39918731 Msa1287980:three_prime_UTR
GTCAGATCTGCGTTGATCGG+AGG 0.599812 8_3:-39915327 None:intergenic
GGGATACTTGGTGAACAACC+AGG 0.600470 8_3:+39917799 Msa1287980:three_prime_UTR
TGTATTGGTAGATAGGTCTG+TGG 0.608262 8_3:+39919076 Msa1287980:three_prime_UTR
ACGCAGCAGTCAAGCATGGA+GGG 0.608771 8_3:+39917221 Msa1287980:three_prime_UTR
GGTCCTCGCAAAACTGTGAG+AGG 0.622630 8_3:-39918166 None:intergenic
TGATGTTGGAAATTTATGGA+AGG 0.628414 8_3:+39919366 Msa1287980:three_prime_UTR
GTATTGGTAGATAGGTCTGT+GGG 0.632157 8_3:+39919077 Msa1287980:three_prime_UTR
ATTCAGGGTGGATGGAAAAG+GGG 0.632839 8_3:-39915349 None:intergenic
TATACAGATTGACGATGGAG+TGG 0.636561 8_3:+39918642 Msa1287980:three_prime_UTR
AGAGGAAAGAGGAGGCGGCG+TGG 0.637222 8_3:-39915274 None:intergenic
AGACCTCCATGAGGGAGATG+CGG 0.642073 8_3:-39915249 None:intergenic
GTGGGATGAGGTTCTTAGAG+AGG 0.644782 8_3:-39915292 None:intergenic
ATACAGATTGACGATGGAGT+GGG 0.647935 8_3:+39918643 Msa1287980:three_prime_UTR
GAACAGCAGTTACCTCTGAA+GGG 0.648159 8_3:-39915380 None:intergenic
TGATCGGAGGTGGAAGAAGG+CGG 0.650837 8_3:-39915314 None:intergenic
TTTGATTCCAATCTTCTCGG+AGG 0.652976 8_3:+39917376 Msa1287980:three_prime_UTR
GCGTGGTAAGACCTCCATGA+GGG 0.655193 8_3:-39915257 None:intergenic
AATCAATTCATGGATATACC+AGG 0.656383 8_3:+39918213 Msa1287980:three_prime_UTR
AAACATACACTAACATCATG+GGG 0.662611 8_3:-39919332 None:intergenic
GTTCTTAGAGAGGAAAGAGG+AGG 0.672475 8_3:-39915282 None:intergenic
GACGCAGCAGTCAAGCATGG+AGG 0.677668 8_3:+39917220 Msa1287980:three_prime_UTR
TCTCCGCATCTCCCTCATGG+AGG 0.691735 8_3:+39915246 Msa1287980:CDS
TTGGTAGATAGGTCTGTGGG+TGG 0.700617 8_3:+39919080 Msa1287980:three_prime_UTR
GGACCTATACAGATTGACGA+TGG 0.714675 8_3:+39918637 Msa1287980:three_prime_UTR
CCGATAGGGATATAGCACAC+AGG 0.721842 8_3:+39917903 Msa1287980:intron
GGCGTGGTAAGACCTCCATG+AGG 0.730085 8_3:-39915258 None:intergenic
AGGGAAGAAAGAATTCAGGG+TGG 0.792067 8_3:-39915361 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATGAATTTCATTATT+TGG + chr8_3:39915564-39915583 Msa1287980:intron 10.0%
!!! TTTTATGAATTTCATTATTT+GGG + chr8_3:39915565-39915584 Msa1287980:intron 10.0%
!!! ACAAAAAAAATACTTTTTTT+AGG - chr8_3:39915831-39915850 None:intergenic 10.0%
!! AATCAAATTAAATCAATTAA+TGG - chr8_3:39917055-39917074 None:intergenic 10.0%
!!! TTTTTATGAATTTCATTATT+TGG + chr8_3:39915564-39915583 Msa1287980:intron 10.0%
!!! TTTTATGAATTTCATTATTT+GGG + chr8_3:39915565-39915584 Msa1287980:intron 10.0%
!! TTTATGAATTTCATTATTTG+GGG + chr8_3:39915566-39915585 Msa1287980:intron 15.0%
!!! TTTTAGTTGTTACTTTTTTA+TGG + chr8_3:39916227-39916246 Msa1287980:intron 15.0%
!!! TTTAGTTGTTACTTTTTTAT+GGG + chr8_3:39916228-39916247 Msa1287980:intron 15.0%
!!! TGCTATCTTAAAAATTTTAT+CGG + chr8_3:39916573-39916592 Msa1287980:intron 15.0%
!! ATTTATTAAGTTTGAATAGA+AGG - chr8_3:39916897-39916916 None:intergenic 15.0%
!! ACAACAATAAACATAAAAAA+GGG - chr8_3:39915530-39915549 None:intergenic 15.0%
!! TTTATGAATTTCATTATTTG+GGG + chr8_3:39915566-39915585 Msa1287980:intron 15.0%
!!! AAAATTAGATTTTCCTAATT+TGG + chr8_3:39917602-39917621 Msa1287980:three_prime_UTR 15.0%
!!! AAATTAGATTTTCCTAATTT+GGG + chr8_3:39917603-39917622 Msa1287980:three_prime_UTR 15.0%
!! TTAAGAAAACAAATAAAACT+TGG + chr8_3:39918356-39918375 Msa1287980:intron 15.0%
!!! ATTTGATTCGTTTTTTGTTA+GGG + chr8_3:39915476-39915495 Msa1287980:intron 20.0%
!!! CTAGTTTGTTAAATGTTTTA+CGG + chr8_3:39915924-39915943 Msa1287980:intron 20.0%
!!! ATAAAACCAGAGTTTTAAAA+AGG - chr8_3:39916052-39916071 None:intergenic 20.0%
!!! TTTTTAAAACTCTGGTTTTA+TGG + chr8_3:39916051-39916070 Msa1287980:intron 20.0%
!!! TTATGGTTAAATGTTTTTTG+TGG + chr8_3:39916068-39916087 Msa1287980:intron 20.0%
!!! ATTTTAAACCATTATGATTG+AGG + chr8_3:39916096-39916115 Msa1287980:intron 20.0%
!! TTCAAAAACAACAGATAATT+AGG - chr8_3:39916326-39916345 None:intergenic 20.0%
!! AAACCAATAAGTAACTATAA+GGG - chr8_3:39916388-39916407 None:intergenic 20.0%
!!! ACTTTAAAAGACATGTATAA+AGG + chr8_3:39916418-39916437 Msa1287980:intron 20.0%
!!! AATAGTCTTGTTATTCATTT+AGG + chr8_3:39916478-39916497 Msa1287980:intron 20.0%
!! AATTATTCTATGTGTAGATA+AGG + chr8_3:39916853-39916872 Msa1287980:intron 20.0%
!! CAACAATAAACATAAAAAAG+GGG - chr8_3:39917273-39917292 None:intergenic 20.0%
!! CACAACAATAAACATAAAAA+AGG - chr8_3:39915531-39915550 None:intergenic 20.0%
!!! CAACATCAATCTAATTTTTT+AGG - chr8_3:39917543-39917562 None:intergenic 20.0%
!!! TAGAGCACTTTTTTTTTTAT+AGG + chr8_3:39917760-39917779 Msa1287980:three_prime_UTR 20.0%
!!! AGAGCACTTTTTTTTTTATA+GGG + chr8_3:39917761-39917780 Msa1287980:three_prime_UTR 20.0%
!!! TTTTTTATAGGGATAAAATG+TGG + chr8_3:39917772-39917791 Msa1287980:three_prime_UTR 20.0%
!! TATTATGTACTAAATAACCA+TGG - chr8_3:39918290-39918309 None:intergenic 20.0%
!! CAATTATTGATATAGCTATA+TGG - chr8_3:39918437-39918456 None:intergenic 20.0%
!!! TTTTTTATTAGAACTGATGT+TGG + chr8_3:39919352-39919371 Msa1287980:three_prime_UTR 20.0%
! ACAAAACGAACTAGAAATTT+GGG - chr8_3:39915124-39915143 None:intergenic 25.0%
!!! GATTTGATTCGTTTTTTGTT+AGG + chr8_3:39915475-39915494 Msa1287980:intron 25.0%
! ATGTTTATTGTTGTGTTTGA+AGG + chr8_3:39915536-39915555 Msa1287980:intron 25.0%
!! GTTTGAAGTAGATTTGAAAA+TGG + chr8_3:39915695-39915714 Msa1287980:intron 25.0%
!! ATCTTCTATTGTTTTCCTTT+TGG + chr8_3:39915732-39915751 Msa1287980:intron 25.0%
!! ATGTTAATTTTTGCGCTATT+TGG + chr8_3:39915786-39915805 Msa1287980:intron 25.0%
! AAAACATTTAACAAACTAGG+TGG - chr8_3:39915923-39915942 None:intergenic 25.0%
! CGTAAAACATTTAACAAACT+AGG - chr8_3:39915926-39915945 None:intergenic 25.0%
!! TTTGTTAAATGTTTTACGGA+AGG + chr8_3:39915928-39915947 Msa1287980:intron 25.0%
! GAATTATACCTCAATCATAA+TGG - chr8_3:39916107-39916126 None:intergenic 25.0%
! TTAGAAAACAACAGATGATA+AGG - chr8_3:39916262-39916281 None:intergenic 25.0%
!!! TACATAAATTGCCTTTTTCA+GGG + chr8_3:39916291-39916310 Msa1287980:intron 25.0%
! ATACCCTTATAGTTACTTAT+TGG + chr8_3:39916382-39916401 Msa1287980:intron 25.0%
! CAAACCAATAAGTAACTATA+AGG - chr8_3:39916389-39916408 None:intergenic 25.0%
! AAAAGACATGTATAAAGGAA+TGG + chr8_3:39916423-39916442 Msa1287980:intron 25.0%
!! AAGATAGCAATGAAGTATTA+TGG - chr8_3:39916562-39916581 None:intergenic 25.0%
! TAAAAAACTGCATGTTTAGT+TGG + chr8_3:39916652-39916671 Msa1287980:intron 25.0%
! TGGTTATTGAATTGTTTAGT+TGG + chr8_3:39916672-39916691 Msa1287980:intron 25.0%
!!! TTGAGCCAAAATACTTTTTT+AGG + chr8_3:39916696-39916715 Msa1287980:intron 25.0%
!!! TGAGCCAAAATACTTTTTTA+GGG + chr8_3:39916697-39916716 Msa1287980:intron 25.0%
! ACTAGAGGTAAATCATAAAA+TGG - chr8_3:39916789-39916808 None:intergenic 25.0%
! AGTTGCATATTATCTTACTT+TGG + chr8_3:39916942-39916961 Msa1287980:intron 25.0%
! GTTGCATATTATCTTACTTT+GGG + chr8_3:39916943-39916962 Msa1287980:intron 25.0%
! TTGCATATTATCTTACTTTG+GGG + chr8_3:39916944-39916963 Msa1287980:intron 25.0%
! TTTCAGCTGTTAAAAAGTTT+GGG + chr8_3:39917149-39917168 Msa1287980:CDS 25.0%
!!! CGTCATTTTTCTGATTTTTT+GGG - chr8_3:39917204-39917223 None:intergenic 25.0%
! AACATAAAAAAGGGGAAAAA+GGG - chr8_3:39917265-39917284 None:intergenic 25.0%
! AAACATAAAAAAGGGGAAAA+AGG - chr8_3:39917266-39917285 None:intergenic 25.0%
! ATGTTTATTGTTGTGTTTGA+AGG + chr8_3:39915536-39915555 Msa1287980:intron 25.0%
! CAAATATCAAATCCCAAATT+AGG - chr8_3:39917618-39917637 None:intergenic 25.0%
! TTTGATATTTGTAGCCATAA+AGG + chr8_3:39917627-39917646 Msa1287980:three_prime_UTR 25.0%
! TTGATATTTGTAGCCATAAA+GGG + chr8_3:39917628-39917647 Msa1287980:three_prime_UTR 25.0%
! TTAAACACAAAATCCCTTTA+TGG - chr8_3:39917644-39917663 None:intergenic 25.0%
! TATAATAGCACAAGTATCAT+AGG + chr8_3:39918310-39918329 Msa1287980:intron 25.0%
! AGTAATTATGTTCGAAAAAC+AGG - chr8_3:39918555-39918574 None:intergenic 25.0%
!!! ATGAAAAATTTGTTGACATC+AGG + chr8_3:39918612-39918631 Msa1287980:intron 25.0%
!!! ACCTTCTATATTGATTCTAA+TGG + chr8_3:39918712-39918731 Msa1287980:three_prime_UTR 25.0%
! TCCATTAGAATCAATATAGA+AGG - chr8_3:39918716-39918735 None:intergenic 25.0%
! TCAACAATTGGTTATTTGAT+TGG - chr8_3:39919192-39919211 None:intergenic 25.0%
! TCCTACAGATTACAATAATA+AGG - chr8_3:39919239-39919258 None:intergenic 25.0%
! TAAATCAGTGTTATCTTACA+AGG - chr8_3:39919288-39919307 None:intergenic 25.0%
! AAAACATACACTAACATCAT+GGG - chr8_3:39919336-39919355 None:intergenic 25.0%
! AAAAACATACACTAACATCA+TGG - chr8_3:39919337-39919356 None:intergenic 25.0%
CACAAAACGAACTAGAAATT+TGG - chr8_3:39915125-39915144 None:intergenic 30.0%
TGGGGATAATTTATGTGATT+AGG + chr8_3:39915584-39915603 Msa1287980:intron 30.0%
TCTACTTCAAACACACATAT+TGG - chr8_3:39915687-39915706 None:intergenic 30.0%
! ATATATGTCTTTTTCCGTTG+TGG + chr8_3:39915866-39915885 Msa1287980:intron 30.0%
AAACATTCATCACAGAAACT+CGG - chr8_3:39916129-39916148 None:intergenic 30.0%
TTCGATGACTAAATCAAAAC+TGG + chr8_3:39916164-39916183 Msa1287980:intron 30.0%
ATGACTAAATCAAAACTGGA+AGG + chr8_3:39916168-39916187 Msa1287980:intron 30.0%
TGACTAAATCAAAACTGGAA+GGG + chr8_3:39916169-39916188 Msa1287980:intron 30.0%
CTGAAAAAGGCAATTTATGT+AGG - chr8_3:39916292-39916311 None:intergenic 30.0%
! CTACATAAATTGCCTTTTTC+AGG + chr8_3:39916290-39916309 Msa1287980:intron 30.0%
!!! ACATAAATTGCCTTTTTCAG+GGG + chr8_3:39916292-39916311 Msa1287980:intron 30.0%
!!! TCCACCCTAAAAAAGTATTT+TGG - chr8_3:39916704-39916723 None:intergenic 30.0%
GATCAAATAATACAGACTAG+AGG - chr8_3:39916804-39916823 None:intergenic 30.0%
! ATAAGGCCAATCTATTCTTT+TGG + chr8_3:39916870-39916889 Msa1287980:intron 30.0%
! TAAGGCCAATCTATTCTTTT+GGG + chr8_3:39916871-39916890 Msa1287980:intron 30.0%
TGCATATTATCTTACTTTGG+GGG + chr8_3:39916945-39916964 Msa1287980:intron 30.0%
ATTGTGTGTATTCTATTCGT+TGG + chr8_3:39916987-39917006 Msa1287980:intron 30.0%
TTGTGTGTATTCTATTCGTT+GGG + chr8_3:39916988-39917007 Msa1287980:intron 30.0%
!! GATTTAATTTGATTGCATCC+AGG + chr8_3:39917061-39917080 Msa1287980:intron 30.0%
!!! TAATGCTGTTTTCTTTTGTG+TGG - chr8_3:39917108-39917127 None:intergenic 30.0%
GTTTCAGCTGTTAAAAAGTT+TGG + chr8_3:39917148-39917167 Msa1287980:CDS 30.0%
CTTCTCATAACATTTCTCTA+AGG - chr8_3:39917181-39917200 None:intergenic 30.0%
!!! GCGTCATTTTTCTGATTTTT+TGG - chr8_3:39917205-39917224 None:intergenic 30.0%
ACATAAAAAAGGGGAAAAAG+GGG - chr8_3:39917264-39917283 None:intergenic 30.0%
TGGGGATAATTTATGTGATT+AGG + chr8_3:39915584-39915603 Msa1287980:intron 30.0%
! ATGTGATTAGGTTTTTGCTT+TGG + chr8_3:39915596-39915615 Msa1287980:intron 30.0%
! GTTTGAAGTAGAATTGAAGA+TGG + chr8_3:39917439-39917458 Msa1287980:three_prime_UTR 30.0%
ATTGTTACTGTTGTGTTATG+TGG + chr8_3:39917700-39917719 Msa1287980:three_prime_UTR 30.0%
ATAGGGATAAAATGTGGTAT+AGG + chr8_3:39917778-39917797 Msa1287980:three_prime_UTR 30.0%
TAGGGATAAAATGTGGTATA+GGG + chr8_3:39917779-39917798 Msa1287980:three_prime_UTR 30.0%
!! AAACAAGTTTCAAGTTTCCT+AGG - chr8_3:39917961-39917980 None:intergenic 30.0%
! GAAACTTGTTTACTCAATGA+AGG + chr8_3:39917970-39917989 Msa1287980:three_prime_UTR 30.0%
TTGTTTACTCAATGAAGGAA+GGG + chr8_3:39917975-39917994 Msa1287980:three_prime_UTR 30.0%
AGCTTACTCAATATATCAAC+AGG + chr8_3:39917999-39918018 Msa1287980:three_prime_UTR 30.0%
! TGTGCTCAATTACCAATTTT+TGG + chr8_3:39918097-39918116 Msa1287980:intron 30.0%
TCTCTTGTTACACCAAAAAT+TGG - chr8_3:39918112-39918131 None:intergenic 30.0%
AATCAATTCATGGATATACC+AGG + chr8_3:39918213-39918232 Msa1287980:three_prime_UTR 30.0%
GTAGTATTCATCGATAGTTT+AGG + chr8_3:39918239-39918258 Msa1287980:intron 30.0%
TAGATTCTTTCAAACATCCA+TGG + chr8_3:39918270-39918289 Msa1287980:intron 30.0%
AAAACTTGGAATCTGTTAAG+AGG + chr8_3:39918370-39918389 Msa1287980:intron 30.0%
!! AAAATTTGTTGACATCAGGT+TGG + chr8_3:39918616-39918635 Msa1287980:intron 30.0%
AACGATCAACATAACATACA+GGG - chr8_3:39918921-39918940 None:intergenic 30.0%
TAACGATCAACATAACATAC+AGG - chr8_3:39918922-39918941 None:intergenic 30.0%
GTATGATATTGTGATACACA+TGG - chr8_3:39918947-39918966 None:intergenic 30.0%
TATCTCTTAGGTAAATTCCA+AGG - chr8_3:39919040-39919059 None:intergenic 30.0%
!! ACTCTTTGCTTTTATCTCTT+AGG - chr8_3:39919052-39919071 None:intergenic 30.0%
! AAGCAAAGAGTTTTCTGTAT+TGG + chr8_3:39919061-39919080 Msa1287980:three_prime_UTR 30.0%
!! AGTTTTCTGTATTGGTAGAT+AGG + chr8_3:39919069-39919088 Msa1287980:three_prime_UTR 30.0%
TCAGGAAAATTCTCAACAAT+TGG - chr8_3:39919204-39919223 None:intergenic 30.0%
ATAAGGCTCAACATAAAATC+AGG - chr8_3:39919222-39919241 None:intergenic 30.0%
! GCCTTATTATTGTAATCTGT+AGG + chr8_3:39919235-39919254 Msa1287980:three_prime_UTR 30.0%
TATTGTAATCTGTAGGATCT+TGG + chr8_3:39919242-39919261 Msa1287980:three_prime_UTR 30.0%
AAACATACACTAACATCATG+GGG - chr8_3:39919335-39919354 None:intergenic 30.0%
GAACTGATGTTGGAAATTTA+TGG + chr8_3:39919362-39919381 Msa1287980:three_prime_UTR 30.0%
TGATGTTGGAAATTTATGGA+AGG + chr8_3:39919366-39919385 Msa1287980:three_prime_UTR 30.0%
CATATTCTTCTTCGTCTTCT+TGG - chr8_3:39915195-39915214 None:intergenic 35.0%
AGACGAAGAAGAATATGTTG+AGG + chr8_3:39915198-39915217 Msa1287980:exon 35.0%
GACGAAGAAGAATATGTTGA+GGG + chr8_3:39915199-39915218 Msa1287980:exon 35.0%
TGAAGGGAAGAAAGAATTCA+GGG - chr8_3:39915367-39915386 None:intergenic 35.0%
!! TTAGGTTTTTGCTTTGAACG+CGG + chr8_3:39915602-39915621 Msa1287980:intron 35.0%
GGATTTGATTCCAATCTTCT+CGG + chr8_3:39915629-39915648 Msa1287980:intron 35.0%
! TCCTTTTGGACTTGTGAATA+AGG + chr8_3:39915746-39915765 Msa1287980:intron 35.0%
TCCTTATTCACAAGTCCAAA+AGG - chr8_3:39915750-39915769 None:intergenic 35.0%
GCGCAAAAATTAACATGCTT+TGG - chr8_3:39915782-39915801 None:intergenic 35.0%
TGAATCGTGGTTATCATGAT+CGG + chr8_3:39915954-39915973 Msa1287980:intron 35.0%
TTTCTTATATCTCCACAGTC+GGG - chr8_3:39915996-39916015 None:intergenic 35.0%
GTTTCTTATATCTCCACAGT+CGG - chr8_3:39915997-39916016 None:intergenic 35.0%
!!! CCAGAGTTTTAAAAAGGTCA+GGG - chr8_3:39916046-39916065 None:intergenic 35.0%
!!! ACCAGAGTTTTAAAAAGGTC+AGG - chr8_3:39916047-39916066 None:intergenic 35.0%
AGACATGTATAAAGGAATGG+AGG + chr8_3:39916426-39916445 Msa1287980:intron 35.0%
GACATGTATAAAGGAATGGA+GGG + chr8_3:39916427-39916446 Msa1287980:intron 35.0%
!!! GCCAAAATACTTTTTTAGGG+TGG + chr8_3:39916700-39916719 Msa1287980:intron 35.0%
! ATTATCTTACTTTGGGGGAT+CGG + chr8_3:39916950-39916969 Msa1287980:intron 35.0%
TTTAACAGCTGAAACAGTTG+CGG - chr8_3:39917143-39917162 None:intergenic 35.0%
CTGTTAAAAAGTTTGGGCTT+GGG + chr8_3:39917155-39917174 Msa1287980:CDS 35.0%
! TGATTAGGTTTTTGCTTTGG+AGG + chr8_3:39917343-39917362 Msa1287980:three_prime_UTR 35.0%
GGATTTGATTCCAATCTTCT+CGG + chr8_3:39915629-39915648 Msa1287980:intron 35.0%
ATATAAACCTCCGAGAAGAT+TGG - chr8_3:39917386-39917405 None:intergenic 35.0%
! GTTGCTATGTTGATTATCTC+TGG + chr8_3:39917559-39917578 Msa1287980:three_prime_UTR 35.0%
AAATGTGGTATAGGGATACT+TGG + chr8_3:39917787-39917806 Msa1287980:three_prime_UTR 35.0%
! CAGAGTGATACATTTGAAGT+AGG + chr8_3:39917935-39917954 Msa1287980:three_prime_UTR 35.0%
CTTGTTTACTCAATGAAGGA+AGG + chr8_3:39917974-39917993 Msa1287980:three_prime_UTR 35.0%
! GCATATATTTTTCGCCCTAA+TGG + chr8_3:39918021-39918040 Msa1287980:three_prime_UTR 35.0%
TGGGAATTGATGAACCATTA+GGG - chr8_3:39918038-39918057 None:intergenic 35.0%
ATGGGAATTGATGAACCATT+AGG - chr8_3:39918039-39918058 None:intergenic 35.0%
TCCATCAGCAAATCAATTCA+TGG + chr8_3:39918203-39918222 Msa1287980:three_prime_UTR 35.0%
!! TCCATGAATTGATTTGCTGA+TGG - chr8_3:39918207-39918226 None:intergenic 35.0%
AATTCATGGATATACCAGGT+AGG + chr8_3:39918217-39918236 Msa1287980:intron 35.0%
CTATATGGAGCTTTCAACAA+GGG - chr8_3:39918422-39918441 None:intergenic 35.0%
! TTCTTTTCCTTTGAACAGTC+TGG - chr8_3:39918485-39918504 None:intergenic 35.0%
ATGGATGTGATTTCATCGAA+CGG + chr8_3:39918731-39918750 Msa1287980:three_prime_UTR 35.0%
! ATGATGATGCATACTTGTAC+AGG + chr8_3:39918836-39918855 Msa1287980:intron 35.0%
TTCGAGACTATAGAAAAGAC+TGG + chr8_3:39918859-39918878 Msa1287980:three_prime_UTR 35.0%
CTATAGAAAAGACTGGAACT+TGG + chr8_3:39918866-39918885 Msa1287980:three_prime_UTR 35.0%
AATTGGAGCTAATGGTTCAT+AGG + chr8_3:39919123-39919142 Msa1287980:three_prime_UTR 35.0%
! TGAGAGCTTGTTTGTTCGTT+CGG - chr8_3:39915152-39915171 None:intergenic 40.0%
AATTCAGGGTGGATGGAAAA+GGG - chr8_3:39915353-39915372 None:intergenic 40.0%
AAGAAAGAATTCAGGGTGGA+TGG - chr8_3:39915360-39915379 None:intergenic 40.0%
CTGAAGGGAAGAAAGAATTC+AGG - chr8_3:39915368-39915387 None:intergenic 40.0%
GAATTCTTTCTTCCCTTCAG+AGG + chr8_3:39915368-39915387 Msa1287980:CDS 40.0%
!! TTTTTGCTTTGAACGCGGTT+TGG + chr8_3:39915607-39915626 Msa1287980:intron 40.0%
!! TTTTGCTTTGAACGCGGTTT+GGG + chr8_3:39915608-39915627 Msa1287980:intron 40.0%
TTTGATTCCAATCTTCTCGG+AGG + chr8_3:39915632-39915651 Msa1287980:intron 40.0%
ATATGAACCTCCGAGAAGAT+TGG - chr8_3:39915642-39915661 None:intergenic 40.0%
!!! TTACGGAAGGTTTTGAATCG+TGG + chr8_3:39915941-39915960 Msa1287980:intron 40.0%
ATTGTATAGAATCCCGACTG+TGG + chr8_3:39915981-39916000 Msa1287980:intron 40.0%
!!! CCCTGACCTTTTTAAAACTC+TGG + chr8_3:39916043-39916062 Msa1287980:intron 40.0%
GGAACAATTTCCCCTGAAAA+AGG - chr8_3:39916305-39916324 None:intergenic 40.0%
GAAGGCCCAAAAGAATAGAT+TGG - chr8_3:39916879-39916898 None:intergenic 40.0%
TTAACAGCTGAAACAGTTGC+GGG - chr8_3:39917142-39917161 None:intergenic 40.0%
GCTGTTAAAAAGTTTGGGCT+TGG + chr8_3:39917154-39917173 Msa1287980:CDS 40.0%
!!! TTAGGTTTTTGCTTTGGAGG+CGG + chr8_3:39917346-39917365 Msa1287980:three_prime_UTR 40.0%
TTTGATTCCAATCTTCTCGG+AGG + chr8_3:39915632-39915651 Msa1287980:intron 40.0%
CTATATTGTTGTCGCTGCTT+TGG + chr8_3:39917492-39917511 Msa1287980:three_prime_UTR 40.0%
ACTGTTGTGTTATGTGGTAC+TGG + chr8_3:39917706-39917725 Msa1287980:three_prime_UTR 40.0%
CTGTTGTGTTATGTGGTACT+GGG + chr8_3:39917707-39917726 Msa1287980:three_prime_UTR 40.0%
ATCACTAATCAGAGCTAACC+TGG - chr8_3:39917820-39917839 None:intergenic 40.0%
!! TTGCAACTGCTATTTCCGAT+AGG + chr8_3:39917888-39917907 Msa1287980:intron 40.0%
!! TGCAACTGCTATTTCCGATA+GGG + chr8_3:39917889-39917908 Msa1287980:intron 40.0%
! GATACATTTGAAGTAGGCCT+AGG + chr8_3:39917941-39917960 Msa1287980:three_prime_UTR 40.0%
! ACCTTCTCGTTGAAGTTGAT+GGG - chr8_3:39918057-39918076 None:intergenic 40.0%
TACCTTCTCGTTGAAGTTGA+TGG - chr8_3:39918058-39918077 None:intergenic 40.0%
ATCGATGAATACTACCTACC+TGG - chr8_3:39918234-39918253 None:intergenic 40.0%
GCTATATGGAGCTTTCAACA+AGG - chr8_3:39918423-39918442 None:intergenic 40.0%
ACTCCATCGTCAATCTGTAT+AGG - chr8_3:39918643-39918662 None:intergenic 40.0%
TATACAGATTGACGATGGAG+TGG + chr8_3:39918642-39918661 Msa1287980:three_prime_UTR 40.0%
ATACAGATTGACGATGGAGT+GGG + chr8_3:39918643-39918662 Msa1287980:three_prime_UTR 40.0%
TGGATGTGATTTCATCGAAC+GGG + chr8_3:39918732-39918751 Msa1287980:three_prime_UTR 40.0%
! TTCTTGTTTCAGATCGACCT+TGG + chr8_3:39919020-39919039 Msa1287980:intron 40.0%
! TGTATTGGTAGATAGGTCTG+TGG + chr8_3:39919076-39919095 Msa1287980:three_prime_UTR 40.0%
! GTATTGGTAGATAGGTCTGT+GGG + chr8_3:39919077-39919096 Msa1287980:three_prime_UTR 40.0%
CAATTGTCCATCTACGATAC+TGG - chr8_3:39919108-39919127 None:intergenic 40.0%
CAGTATCGTAGATGGACAAT+TGG + chr8_3:39919106-39919125 Msa1287980:three_prime_UTR 40.0%
AGATGGACAATTGGAGCTAA+TGG + chr8_3:39919115-39919134 Msa1287980:three_prime_UTR 40.0%
TTCTTCTTCGTCTTCTTGGC+TGG - chr8_3:39915191-39915210 None:intergenic 45.0%
GTTCTTAGAGAGGAAAGAGG+AGG - chr8_3:39915285-39915304 None:intergenic 45.0%
GAGGTTCTTAGAGAGGAAAG+AGG - chr8_3:39915288-39915307 None:intergenic 45.0%
ATTCAGGGTGGATGGAAAAG+GGG - chr8_3:39915352-39915371 None:intergenic 45.0%
GAATTCAGGGTGGATGGAAA+AGG - chr8_3:39915354-39915373 None:intergenic 45.0%
AGGGAAGAAAGAATTCAGGG+TGG - chr8_3:39915364-39915383 None:intergenic 45.0%
GAACAGCAGTTACCTCTGAA+GGG - chr8_3:39915383-39915402 None:intergenic 45.0%
AGAACAGCAGTTACCTCTGA+AGG - chr8_3:39915384-39915403 None:intergenic 45.0%
CGGAGGTTCATATGTTAGTG+TGG + chr8_3:39915649-39915668 Msa1287980:intron 45.0%
GTGCAGTTCTACAACCACAA+CGG - chr8_3:39915883-39915902 None:intergenic 45.0%
! AAGGTCAGGGAGCATGATTT+GGG - chr8_3:39916033-39916052 None:intergenic 45.0%
! AAAGGTCAGGGAGCATGATT+TGG - chr8_3:39916034-39916053 None:intergenic 45.0%
AGTGACTCAGTAGCAAAACC+TGG - chr8_3:39917082-39917101 None:intergenic 45.0%
GAAACAGTTGCGGGAATTTC+AGG - chr8_3:39917133-39917152 None:intergenic 45.0%
!!! TTTTTGCTTTGGAGGCGGTT+TGG + chr8_3:39917351-39917370 Msa1287980:three_prime_UTR 45.0%
!!! TTTTGCTTTGGAGGCGGTTT+GGG + chr8_3:39917352-39917371 Msa1287980:three_prime_UTR 45.0%
TTGGTCTGCAAGGTTATCTC+AGG + chr8_3:39917511-39917530 Msa1287980:three_prime_UTR 45.0%
CCTGTGTGCTATATCCCTAT+CGG - chr8_3:39917906-39917925 None:intergenic 45.0%
TCCCATCAACTTCAACGAGA+AGG + chr8_3:39918053-39918072 Msa1287980:three_prime_UTR 45.0%
!! TGATGGACTTCATGCACGAT+TGG - chr8_3:39918190-39918209 None:intergenic 45.0%
! TCTGTTAAGAGGCATGCAGT+AGG + chr8_3:39918381-39918400 Msa1287980:intron 45.0%
CAGACTACCAGACTGTTCAA+AGG + chr8_3:39918475-39918494 Msa1287980:intron 45.0%
GGACCTATACAGATTGACGA+TGG + chr8_3:39918637-39918656 Msa1287980:three_prime_UTR 45.0%
ATCGAACGGGTATGTCAAAC+AGG + chr8_3:39918745-39918764 Msa1287980:intron 45.0%
GAAGTGAATCAACCTGTTGC+TGG + chr8_3:39918888-39918907 Msa1287980:three_prime_UTR 45.0%
CAGGGTAATATTCCAGCAAC+AGG - chr8_3:39918903-39918922 None:intergenic 45.0%
CTTAGAGAGGAAAGAGGAGG+CGG - chr8_3:39915282-39915301 None:intergenic 50.0%
GTGGGATGAGGTTCTTAGAG+AGG - chr8_3:39915295-39915314 None:intergenic 50.0%
AATGACGCAGCAGTCAAGCA+TGG + chr8_3:39917217-39917236 Msa1287980:three_prime_UTR 50.0%
! GGGATACTTGGTGAACAACC+AGG + chr8_3:39917799-39917818 Msa1287980:three_prime_UTR 50.0%
CCGATAGGGATATAGCACAC+AGG + chr8_3:39917903-39917922 Msa1287980:intron 50.0%
AGGGATATAGCACACAGGTC+AGG + chr8_3:39917908-39917927 Msa1287980:intron 50.0%
GGGATATAGCACACAGGTCA+GGG + chr8_3:39917909-39917928 Msa1287980:intron 50.0%
! TCTCCTCTCACAGTTTTGCG+AGG + chr8_3:39918163-39918182 Msa1287980:three_prime_UTR 50.0%
TTGGTAGATAGGTCTGTGGG+TGG + chr8_3:39919080-39919099 Msa1287980:three_prime_UTR 50.0%
GGTGGTTCCAGTATCGTAGA+TGG + chr8_3:39919098-39919117 Msa1287980:three_prime_UTR 50.0%
AGACCTCCATGAGGGAGATG+CGG - chr8_3:39915252-39915271 None:intergenic 55.0%
GCGTGGTAAGACCTCCATGA+GGG - chr8_3:39915260-39915279 None:intergenic 55.0%
TGATCGGAGGTGGAAGAAGG+CGG - chr8_3:39915317-39915336 None:intergenic 55.0%
CGTTGATCGGAGGTGGAAGA+AGG - chr8_3:39915320-39915339 None:intergenic 55.0%
! AGATCTGCGTTGATCGGAGG+TGG - chr8_3:39915327-39915346 None:intergenic 55.0%
! GTCAGATCTGCGTTGATCGG+AGG - chr8_3:39915330-39915349 None:intergenic 55.0%
! GGGGTCAGATCTGCGTTGAT+CGG - chr8_3:39915333-39915352 None:intergenic 55.0%
ACGCAGCAGTCAAGCATGGA+GGG + chr8_3:39917221-39917240 Msa1287980:three_prime_UTR 55.0%
! TGTCGCTGCTTTGGTCTGCA+AGG + chr8_3:39917501-39917520 Msa1287980:three_prime_UTR 55.0%
GGTCCTCGCAAAACTGTGAG+AGG - chr8_3:39918169-39918188 None:intergenic 55.0%
CTCTCTCCGCATCTCCCTCA+TGG + chr8_3:39915243-39915262 Msa1287980:CDS 60.0%
TCTCCGCATCTCCCTCATGG+AGG + chr8_3:39915246-39915265 Msa1287980:CDS 60.0%
GGCGTGGTAAGACCTCCATG+AGG - chr8_3:39915261-39915280 None:intergenic 60.0%
TGGAAGAAGGCGGTGGGATG+AGG - chr8_3:39915307-39915326 None:intergenic 60.0%
GACGCAGCAGTCAAGCATGG+AGG + chr8_3:39917220-39917239 Msa1287980:three_prime_UTR 60.0%
AGAGGAAAGAGGAGGCGGCG+TGG - chr8_3:39915277-39915296 None:intergenic 65.0%
CGGAGGTGGAAGAAGGCGGT+GGG - chr8_3:39915313-39915332 None:intergenic 65.0%
TCGGAGGTGGAAGAAGGCGG+TGG - chr8_3:39915314-39915333 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 39915097 39919391 39915097 ID=Msa1287980;Name=Msa1287980
chr8_3 mRNA 39915097 39919391 39915097 ID=Msa1287980-mRNA-1;Parent=Msa1287980;Name=Msa1287980-mRNA-1;_AED=0.03;_eAED=0.03;_QI=115|1|1|1|0.71|0.62|8|1466|92
chr8_3 exon 39915097 39915389 39915097 ID=Msa1287980-mRNA-1:exon:11125;Parent=Msa1287980-mRNA-1
chr8_3 exon 39917083 39917820 39917083 ID=Msa1287980-mRNA-1:exon:11126;Parent=Msa1287980-mRNA-1
chr8_3 exon 39917910 39918074 39917910 ID=Msa1287980-mRNA-1:exon:11127;Parent=Msa1287980-mRNA-1
chr8_3 exon 39918163 39918234 39918163 ID=Msa1287980-mRNA-1:exon:11128;Parent=Msa1287980-mRNA-1
chr8_3 exon 39918478 39918525 39918478 ID=Msa1287980-mRNA-1:exon:11129;Parent=Msa1287980-mRNA-1
chr8_3 exon 39918634 39918753 39918634 ID=Msa1287980-mRNA-1:exon:11130;Parent=Msa1287980-mRNA-1
chr8_3 exon 39918858 39918921 39918858 ID=Msa1287980-mRNA-1:exon:11131;Parent=Msa1287980-mRNA-1
chr8_3 exon 39919032 39919391 39919032 ID=Msa1287980-mRNA-1:exon:11132;Parent=Msa1287980-mRNA-1
chr8_3 five_prime_UTR 39915097 39915211 39915097 ID=Msa1287980-mRNA-1:five_prime_utr;Parent=Msa1287980-mRNA-1
chr8_3 CDS 39915212 39915389 39915212 ID=Msa1287980-mRNA-1:cds;Parent=Msa1287980-mRNA-1
chr8_3 CDS 39917083 39917183 39917083 ID=Msa1287980-mRNA-1:cds;Parent=Msa1287980-mRNA-1
chr8_3 three_prime_UTR 39917184 39917820 39917184 ID=Msa1287980-mRNA-1:three_prime_utr;Parent=Msa1287980-mRNA-1
chr8_3 three_prime_UTR 39917910 39918074 39917910 ID=Msa1287980-mRNA-1:three_prime_utr;Parent=Msa1287980-mRNA-1
chr8_3 three_prime_UTR 39918163 39918234 39918163 ID=Msa1287980-mRNA-1:three_prime_utr;Parent=Msa1287980-mRNA-1
chr8_3 three_prime_UTR 39918478 39918525 39918478 ID=Msa1287980-mRNA-1:three_prime_utr;Parent=Msa1287980-mRNA-1
chr8_3 three_prime_UTR 39918634 39918753 39918634 ID=Msa1287980-mRNA-1:three_prime_utr;Parent=Msa1287980-mRNA-1
chr8_3 three_prime_UTR 39918858 39918921 39918858 ID=Msa1287980-mRNA-1:three_prime_utr;Parent=Msa1287980-mRNA-1
chr8_3 three_prime_UTR 39919032 39919391 39919032 ID=Msa1287980-mRNA-1:three_prime_utr;Parent=Msa1287980-mRNA-1
Gene Sequence

>Msa1287980

ATGTTGAGGGTTGCATCTAAGAAGCTTTCTTCTCTCTCCGCATCTCCCTCATGGAGGTCTTACCACGCCGCCTCCTCTTTCCTCTCTAAGAACCTCATCCCACCGCCTTCTTCCACCTCCGATCAACGCAGATCTGACCCCTTTTCCATCCACCCTGAATTCTTTCTTCCCTTCAGAGGTTTTGCTACTGAGTCACTGATCCACACAAAAGAAAACAGCATTATTCCTGAAATTCCCGCAACTGTTTCAGCTGTTAAAAAGTTTGGGCTTGGGCCTTAG
Protein sequence

>Msa1287980

MLRVASKKLSSLSASPSWRSYHAASSFLSKNLIPPPSSTSDQRRSDPFSIHPEFFLPFRGFATESLIHTKENSIIPEIPATVSAVKKFGLGP*