AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0927680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0927680 MtrunA17_Chr6g0485101 91.469 715 44 3 1 715 1 698 0.0 1313
Msa0927680 MtrunA17_Chr8g0390701 56.818 748 230 17 1 715 1 688 0.0 743
Msa0927680 MtrunA17_Chr6g0460621 50.000 238 102 5 16 239 15 249 3.21e-65 229
Msa0927680 MtrunA17_Chr1g0148531 29.226 349 140 8 66 344 1 312 8.85e-29 120
Msa0927680 MtrunA17_Chr8g0360731 28.000 150 89 4 10 147 14 156 5.22e-17 84.3
Msa0927680 MtrunA17_Chr2g0318391 26.994 163 109 3 8 167 12 167 2.45e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0927680 AT4G13350.1 48.027 583 221 11 1 569 1 515 1.29e-153 459
Msa0927680 AT4G13350.2 48.027 583 221 11 1 569 1 515 1.29e-153 459
Msa0927680 AT4G32630.2 32.483 745 350 29 5 714 1 627 7.85e-82 273
Msa0927680 AT4G32630.6 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0927680 AT4G32630.4 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0927680 AT4G32630.5 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0927680 AT4G32630.3 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0927680 AT4G32630.1 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0927680 AT1G08680.3 59.412 170 67 2 1 169 2 170 1.91e-64 225
Msa0927680 AT1G08680.5 59.412 170 67 2 1 169 2 170 2.32e-64 224
Msa0927680 AT1G08680.2 44.771 306 148 9 1 298 2 294 2.89e-64 226
Msa0927680 AT1G08680.4 44.771 306 148 9 1 298 2 294 2.90e-64 226
Msa0927680 AT1G08680.1 44.771 306 148 9 1 298 2 294 2.94e-64 226
Msa0927680 AT5G54310.1 28.221 163 102 7 10 167 14 166 3.74e-13 72.8
Msa0927680 AT4G21160.2 31.452 124 63 5 12 122 15 129 2.73e-11 66.2
Msa0927680 AT4G21160.3 31.452 124 63 5 12 122 15 129 2.73e-11 66.2
Msa0927680 AT4G21160.1 31.452 124 63 5 12 122 15 129 2.73e-11 66.2
Msa0927680 AT4G21160.4 31.452 124 63 5 12 122 15 129 2.73e-11 66.2

Find 297 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACCTGTTAGAGATATTT+TGG 0.113010 6_2:-72176662 Msa0927680:CDS
CTCTACTTGGCTTTCGTTAC+TGG 0.146357 6_2:+72175883 None:intergenic
CATACACTTGGGGCTTGATT+TGG 0.188678 6_2:+72174571 None:intergenic
ATACACTTGGGGCTTGATTT+GGG 0.205821 6_2:+72174572 None:intergenic
CAGGAGAGTTGAGGCATATC+AGG 0.233416 6_2:-72176938 Msa0927680:CDS
TTCTGAGTCGTGCTCTTTCA+TGG 0.256163 6_2:-72173055 Msa0927680:three_prime_UTR
AATATGTGTGCACAAATTTC+TGG 0.257954 6_2:-72178111 Msa0927680:CDS
GGAGTGGTTCCCGGCCTATC+AGG 0.277885 6_2:+72173491 None:intergenic
CCAGCAGCAGCTCCTAGTTT+TGG 0.290873 6_2:-72175516 Msa0927680:CDS
CTCTGGCTTGGAGGGTGCAT+TGG 0.292668 6_2:+72174258 None:intergenic
TACTTTCCTGCTCCAGTTCA+AGG 0.301141 6_2:-72174942 Msa0927680:CDS
CCACCCCTGCCATCCTTTCA+AGG 0.302420 6_2:-72174147 Msa0927680:CDS
CCGAATGGATTCCCTCCTTT+GGG 0.307754 6_2:+72173452 None:intergenic
TTAGAGCTGGGAGTGGTTCC+CGG 0.312806 6_2:+72173482 None:intergenic
GGTTAGAAATGTTGAAGTTC+TGG 0.319675 6_2:+72181625 None:intergenic
CTATCAGGCAGCTGCTGATT+TGG 0.325530 6_2:+72173506 None:intergenic
TTGAAGTTCTGGAAGGTTCT+TGG 0.333531 6_2:+72181636 None:intergenic
GAGAAAATGTAATACCTCTT+AGG 0.336552 6_2:-72176639 Msa0927680:CDS
CCCGAATGGATTCCCTCCTT+TGG 0.337927 6_2:+72173451 None:intergenic
AGGCAAGGAGTTGGGAATTT+CGG 0.339840 6_2:-72173560 Msa0927680:CDS
GGGTTTATATATGATGATTA+TGG 0.348003 6_2:+72181657 None:intergenic
AGTATCAGATGGAGATTATA+AGG 0.353912 6_2:-72176743 Msa0927680:CDS
TCTCCCAAAATATCTCTAAC+AGG 0.355400 6_2:+72176658 None:intergenic
TTGGTGCCAGTAATGTTAAC+AGG 0.360040 6_2:-72177231 Msa0927680:intron
ACTGTTGGAGCAACAGGTTC+AGG 0.363404 6_2:+72175815 None:intergenic
GGATTTGTGATGACCGGCTC+TGG 0.363823 6_2:-72173307 Msa0927680:three_prime_UTR
TTGAGGCACACTGGATTGTT+GGG 0.368269 6_2:+72175784 None:intergenic
GCCCAGGTCTCTAGCTCGTT+CGG 0.369926 6_2:+72176705 None:intergenic
TTTGGGGAAGGGGTTAGAGC+TGG 0.369937 6_2:+72173469 None:intergenic
TGAGGAACTGTTGGAGCAAC+AGG 0.372048 6_2:+72175809 None:intergenic
CTGCCTAATGTACCACCTTC+AGG 0.373574 6_2:-72174120 Msa0927680:CDS
GGATTTCCTGACTGCAAAAC+AGG 0.377480 6_2:+72175761 None:intergenic
TGAAGTTCTGGAAGGTTCTT+GGG 0.383875 6_2:+72181637 None:intergenic
GAAATCCCAGTGATGACAAT+TGG 0.385158 6_2:-72175745 Msa0927680:CDS
CAGTTAATACATCTCCGATT+TGG 0.387443 6_2:+72181255 None:intergenic
CTAGGAGCTGCTGCTGGAAT+AGG 0.389666 6_2:+72175522 None:intergenic
TCTGGCTTGGAGGGTGCATT+GGG 0.389848 6_2:+72174259 None:intergenic
GGGAGTGATGGTGGTACATT+AGG 0.391076 6_2:+72174279 None:intergenic
CAAATCAGCAGCTGCCTGAT+AGG 0.391546 6_2:-72173505 Msa0927680:CDS
AAGATTCCGACACGGACAAT+TGG 0.392823 6_2:+72175645 None:intergenic
CCCATTTGCCAACCTTGAAC+TGG 0.394548 6_2:+72174930 None:intergenic
GATCAAGAAAGTAGGCAATA+TGG 0.399904 6_2:-72176829 Msa0927680:CDS
GTTTGTTAAGCATGTTTATG+AGG 0.401277 6_2:-72177200 Msa0927680:CDS
ATGTATTAACTGTAATAGTT+TGG 0.402848 6_2:-72181244 Msa0927680:intron
CATTGTCCTACATTATTATG+AGG 0.408827 6_2:+72175444 None:intergenic
AACCGTGCAGTCTTCAACCC+TGG 0.409273 6_2:-72174193 Msa0927680:CDS
ACAATATACTATCTTGGATA+AGG 0.410533 6_2:-72173228 Msa0927680:three_prime_UTR
CCTTCCATGTCTTCCTTGCA+CGG 0.412348 6_2:-72174309 Msa0927680:CDS
AGATAGAGAGATTGAATGAA+GGG 0.413186 6_2:-72173182 Msa0927680:three_prime_UTR
GATCGGCATCAAAATCAATA+AGG 0.413195 6_2:+72175837 None:intergenic
TGTAAACTGTTTATTCCTAT+AGG 0.414631 6_2:-72173259 Msa0927680:three_prime_UTR
GTTGAGGCACACTGGATTGT+TGG 0.415038 6_2:+72175783 None:intergenic
CCCAGGTCTCTAGCTCGTTC+GGG 0.418011 6_2:+72176706 None:intergenic
ATGATGATTGAAATTGCGTT+TGG 0.419385 6_2:-72181386 Msa0927680:five_prime_UTR
CCAAAGGAGGGAATCCATTC+GGG 0.420807 6_2:-72173451 Msa0927680:CDS
GTACAAACACATGTAAGTTT+CGG 0.424020 6_2:-72173371 Msa0927680:three_prime_UTR
TGTGTATCACCTTGGACTCC+TGG 0.424442 6_2:+72175608 None:intergenic
CCAGTTCAAGGTTGGCAAAT+GGG 0.424788 6_2:-72174930 Msa0927680:CDS
GGATTCCCTCCTTTGGGGAA+GGG 0.425243 6_2:+72173458 None:intergenic
GACACACAGGAACGTCGTTA+TGG 0.426530 6_2:-72176889 Msa0927680:CDS
GTCCTCCAGTTGTCAATGAT+TGG 0.426864 6_2:-72176783 Msa0927680:CDS
GCAAGTACTTACCTGCTGTC+AGG 0.428298 6_2:+72177312 None:intergenic
ATGCCTGAAGGTGGTACATT+AGG 0.431901 6_2:+72174117 None:intergenic
CAATATACTATCTTGGATAA+GGG 0.431965 6_2:-72173227 Msa0927680:three_prime_UTR
CCCAAAGGAGGGAATCCATT+CGG 0.433525 6_2:-72173452 Msa0927680:CDS
TTGGCAAATGGGTCCTCCGC+AGG 0.434161 6_2:-72174919 Msa0927680:CDS
CTGTTAAAAGCCTCATTAGC+AGG 0.435777 6_2:+72175147 None:intergenic
TTGGGGAAGGGGTTAGAGCT+GGG 0.436834 6_2:+72173470 None:intergenic
CTACTTTCTTGATCATATCC+AGG 0.438353 6_2:+72176838 None:intergenic
GATTCCCTCCTTTGGGGAAG+GGG 0.439278 6_2:+72173459 None:intergenic
TAGATAGAGAGATTGAATGA+AGG 0.439631 6_2:-72173183 Msa0927680:three_prime_UTR
GGAACTGAGGGAAACATGTT+CGG 0.441681 6_2:-72173539 Msa0927680:CDS
GTTTCGGTTTCTATTGTTTG+TGG 0.443066 6_2:-72173355 Msa0927680:three_prime_UTR
AAGACGATTCCTATGAAAAC+AGG 0.449938 6_2:-72176957 Msa0927680:CDS
AGAAGCCCAATTGTCATCAC+TGG 0.452119 6_2:+72175739 None:intergenic
GGAGGGTGCATTGGGAGTGA+TGG 0.452418 6_2:+72174267 None:intergenic
GCATGTGGCATTGGTGCATT+CGG 0.453125 6_2:+72175189 None:intergenic
GTAATACCTCTTAGGATAAG+TGG 0.454550 6_2:-72176631 Msa0927680:CDS
GGAAGTTCTGTTCTTCCACT+TGG 0.456507 6_2:+72175090 None:intergenic
TGACGATGGGGTTGGAGTCC+AGG 0.457193 6_2:+72174059 None:intergenic
TGCAATGAACTGCTCTGGCT+TGG 0.457749 6_2:+72174246 None:intergenic
TGTTGGGCTTGAGGAACTGT+TGG 0.457958 6_2:+72175800 None:intergenic
TATGAGGATAGGAGATTCAC+TGG 0.458069 6_2:-72177184 Msa0927680:CDS
TCCAGTTCAAGGTTGGCAAA+TGG 0.459544 6_2:-72174931 Msa0927680:CDS
AATGAACTGCTCTGGCTTGG+AGG 0.462667 6_2:+72174249 None:intergenic
ATAGGAGATTCACTGGAGAT+AGG 0.463488 6_2:-72177177 Msa0927680:CDS
TACACTTGGGGCTTGATTTG+GGG 0.463639 6_2:+72174573 None:intergenic
TGCCAACCTTGAACTGGAGC+AGG 0.464842 6_2:+72174936 None:intergenic
GGATTTAAATTTGAGGTGCT+TGG 0.465186 6_2:+72175686 None:intergenic
TGGATTCCCTCCTTTGGGGA+AGG 0.465352 6_2:+72173457 None:intergenic
TCATAATAATGTAGGACAAT+GGG 0.466865 6_2:-72175442 Msa0927680:CDS
CAATGTGCAGGCAAGGAGTT+GGG 0.467253 6_2:-72173568 Msa0927680:intron
GTTGGAGTCCAGGCATGGGA+TGG 0.467652 6_2:+72174069 None:intergenic
CGACGCCAATCATTGACAAC+TGG 0.467673 6_2:+72176778 None:intergenic
AAGAAAGAAAGAGAGAGAAA+CGG 0.467763 6_2:+72181707 None:intergenic
TAGGCAATCCATCCCATGCC+TGG 0.469752 6_2:-72174077 Msa0927680:CDS
ATTATGGTGAAGAGTGAAAA+CGG 0.469794 6_2:+72181673 None:intergenic
TCAGCAGCTGCCTGATAGGC+CGG 0.471517 6_2:-72173501 Msa0927680:CDS
AGATTCCGACACGGACAATT+GGG 0.472985 6_2:+72175646 None:intergenic
AAGAAGTTGTTGTTAGAGAT+GGG 0.474534 6_2:-72181339 Msa0927680:exon
GGGGAGACAATATACTATCT+TGG 0.475390 6_2:-72173234 Msa0927680:three_prime_UTR
TCTCAAATTTAATCTCTACT+TGG 0.475894 6_2:+72175870 None:intergenic
CGGTTTCTATTGTTTGTGGA+TGG 0.479058 6_2:-72173351 Msa0927680:three_prime_UTR
ACTTCAAGAAGGAGGAAATC+AGG 0.479603 6_2:-72177487 Msa0927680:intron
TTCAAGCGGATTTAAATTTG+AGG 0.480362 6_2:+72175679 None:intergenic
TGATGGTATGCATGTGGCAT+TGG 0.480583 6_2:+72175180 None:intergenic
GCCACATTATTATATTGCAT+TGG 0.481046 6_2:+72174891 None:intergenic
GAAGGGGTTAGAGCTGGGAG+TGG 0.481281 6_2:+72173475 None:intergenic
TCTTGGATAAGGGGAGTTTG+AGG 0.483587 6_2:-72173217 Msa0927680:three_prime_UTR
ATGAACTGCTCTGGCTTGGA+GGG 0.485297 6_2:+72174250 None:intergenic
AATGGATTTGTTGACCTTGA+CGG 0.485427 6_2:+72174616 None:intergenic
ACCTTCTGTACCCACAGGAC+AGG 0.486237 6_2:-72175217 Msa0927680:CDS
ATGCATGCAATGAACTGCTC+TGG 0.489391 6_2:+72174241 None:intergenic
AACTGCATCCTCTGGCAGCT+TGG 0.489875 6_2:-72175909 Msa0927680:CDS
CTGAAGGTGGTACATTAGGC+AGG 0.490324 6_2:+72174121 None:intergenic
ATTGACAACTGGAGGACGAC+CGG 0.490377 6_2:+72176789 None:intergenic
TCTTTACCTTCTCATGCTCC+AGG 0.491077 6_2:-72175626 Msa0927680:CDS
TACATTATTATGAGGTGATA+CGG 0.491099 6_2:+72175452 None:intergenic
GGGTGGTGCTGTAAATAGTC+AGG 0.491868 6_2:-72175355 Msa0927680:intron
TGCCTCAAAGCCTGCTAATG+AGG 0.492851 6_2:-72175157 Msa0927680:CDS
TCACACGATGTGTAAATTCA+CGG 0.492952 6_2:+72177553 None:intergenic
GTCATACGCTGGGCAGCAAA+TGG 0.493340 6_2:-72173921 Msa0927680:CDS
AAATCCCAGTGATGACAATT+GGG 0.494998 6_2:-72175744 Msa0927680:CDS
AGAGAAATTTACCTTGGCAT+TGG 0.497729 6_2:+72173887 None:intergenic
AACTGTTTATTCCTATAGGA+GGG 0.499191 6_2:-72173255 Msa0927680:three_prime_UTR
AGCCTCATTAGCAGGCTTTG+AGG 0.499841 6_2:+72175155 None:intergenic
TCCTGTGTGTCTTCGTATGG+AGG 0.503139 6_2:+72176901 None:intergenic
TTAAGCATGTTTATGAGGAT+AGG 0.505517 6_2:-72177195 Msa0927680:CDS
AATCTACTGTTACAAATACA+TGG 0.505680 6_2:+72173109 None:intergenic
AATTGTTGACTAGCAGAAGC+AGG 0.505821 6_2:+72175390 None:intergenic
CCTTGAAAGGATGGCAGGGG+TGG 0.506197 6_2:+72174147 None:intergenic
TCGTGTGAAATCAGTTTCAA+TGG 0.506647 6_2:-72177538 Msa0927680:CDS
CCAAAACTAGGAGCTGCTGC+TGG 0.507856 6_2:+72175516 None:intergenic
TGGTTGCGGATGCTGCAAAC+TGG 0.508220 6_2:+72175419 None:intergenic
TGGGATGGATTGCCTAGGTT+CGG 0.509902 6_2:+72174084 None:intergenic
AGTCCAGGTGGAAGAAGTCC+TGG 0.510458 6_2:-72176856 Msa0927680:CDS
CAAGTACTTACCTGCTGTCA+GGG 0.511056 6_2:+72177313 None:intergenic
AAATTTGTGCACACATATTG+TGG 0.512763 6_2:+72178115 None:intergenic
TACTTTCAGGGTCATACGCT+GGG 0.514743 6_2:-72173931 Msa0927680:intron
TCAATGTGCAGGCAAGGAGT+TGG 0.515383 6_2:-72173569 Msa0927680:intron
ATGGGGTTGGAGTCCAGGCA+TGG 0.516624 6_2:+72174064 None:intergenic
TTTGTTTGCACTAATTGTAG+TGG 0.518672 6_2:-72178085 Msa0927680:CDS
AAACTGTTTATTCCTATAGG+AGG 0.519443 6_2:-72173256 Msa0927680:three_prime_UTR
CGTTCCTGTGTGTCTTCGTA+TGG 0.519529 6_2:+72176898 None:intergenic
GATGGATTGCCTAGGTTCGG+AGG 0.521926 6_2:+72174087 None:intergenic
AGAAGATGAAGAAGAAGAAA+CGG 0.522489 6_2:+72181604 None:intergenic
TGGGGTTGGAGTCCAGGCAT+GGG 0.524458 6_2:+72174065 None:intergenic
GGGAACCTTGAAAGGATGGC+AGG 0.524803 6_2:+72174142 None:intergenic
CGCACCGTGCAAGGAAGACA+TGG 0.526086 6_2:+72174305 None:intergenic
TAATAAGAAACAACGACTGA+AGG 0.528841 6_2:+72173147 None:intergenic
TCCTCTCGGTGGTTTGTCAG+AGG 0.529596 6_2:+72177153 None:intergenic
GAAGAAGTTGTTGTTAGAGA+TGG 0.529920 6_2:-72181340 Msa0927680:exon
TGTTTACTGCTGACATCGAA+TGG 0.529956 6_2:+72174598 None:intergenic
TTTCAGAGAACTGCATCCTC+TGG 0.530588 6_2:-72175917 Msa0927680:intron
GGGTGCATTGGGAGTGATGG+TGG 0.532284 6_2:+72174270 None:intergenic
ACACTGGATTGTTGGGCTTG+AGG 0.532649 6_2:+72175791 None:intergenic
GGTTTAACTTCTACAGCAGA+AGG 0.534195 6_2:+72175111 None:intergenic
TAGCAGGCTTTGAGGCATGA+TGG 0.534756 6_2:+72175163 None:intergenic
AGGGGTGGAGTCCATGCATG+TGG 0.538337 6_2:+72174162 None:intergenic
CCTTCTGTACCCACAGGACA+GGG 0.538600 6_2:-72175216 Msa0927680:CDS
TTCCTGCTCCAGTTCAAGGT+TGG 0.540598 6_2:-72174938 Msa0927680:CDS
GGCGATTATAAGAGAAGTCC+CGG 0.541192 6_2:-72176808 Msa0927680:CDS
GGATGGCACTGAAGTGCCAC+TGG 0.541437 6_2:+72175473 None:intergenic
ATTAGGCAGGGAACCTTGAA+AGG 0.541766 6_2:+72174134 None:intergenic
TGTTGTTAGAGATGGGGACT+CGG 0.542007 6_2:-72181332 Msa0927680:exon
CAGCAGCTGCCTGATAGGCC+GGG 0.542449 6_2:-72173500 Msa0927680:CDS
AGGAACGTCGTTATGGTGAC+AGG 0.542766 6_2:-72176882 Msa0927680:CDS
CTGTTTATTCCTATAGGAGG+GGG 0.543235 6_2:-72173253 Msa0927680:three_prime_UTR
GAAGCAGGGAACGTTGGTTG+CGG 0.544995 6_2:+72175405 None:intergenic
GTTGGGAATTTCGGAACTGA+GGG 0.545099 6_2:-72173551 Msa0927680:CDS
CGGGTGGGCTTGAAGAGCCC+AGG 0.546386 6_2:+72176689 None:intergenic
GGCAGGGAACCTTGAAAGGA+TGG 0.546497 6_2:+72174138 None:intergenic
TAACAGTAGATTGAGAGTAA+TGG 0.546744 6_2:-72173098 Msa0927680:three_prime_UTR
CCTGACTGCAAAACAGGTTG+AGG 0.547283 6_2:+72175767 None:intergenic
AATTCTTTACATTACCCGAA+TGG 0.547762 6_2:+72173437 None:intergenic
GATAGAGAGATTGAATGAAG+GGG 0.547981 6_2:-72173181 Msa0927680:three_prime_UTR
CTTGACGGCTGTGAATAACT+TGG 0.548241 6_2:+72174631 None:intergenic
ACCGTGCAGTCTTCAACCCT+GGG 0.549066 6_2:-72174192 Msa0927680:CDS
AATGAAGGATTTGTGATGAC+CGG 0.549674 6_2:-72173313 Msa0927680:three_prime_UTR
AGAGCAGTTCATTGCATGCA+TGG 0.549789 6_2:-72174239 Msa0927680:CDS
TCTCATGCTCCAGGAGTCCA+AGG 0.550042 6_2:-72175617 Msa0927680:intron
GCAATTCTTTCCCTGACAGC+AGG 0.550264 6_2:-72177323 Msa0927680:intron
TGAAGACTGCACGGTTCCTA+CGG 0.553012 6_2:+72174200 None:intergenic
CTGGATATGATCAAGAAAGT+AGG 0.553339 6_2:-72176837 Msa0927680:CDS
CCTGTGTGTCTTCGTATGGA+GGG 0.554844 6_2:+72176902 None:intergenic
TTTGTCCCAATTGTCCGTGT+CGG 0.555220 6_2:-72175651 Msa0927680:CDS
GTATCACCTCATAATAATGT+AGG 0.555607 6_2:-72175450 Msa0927680:CDS
ATTCGGATGCCCCTGTCCTG+TGG 0.557545 6_2:+72175206 None:intergenic
ATTAGGCAACGCACCGTGCA+AGG 0.558361 6_2:+72174296 None:intergenic
TGGGTTATCCACCACATGCA+TGG 0.559865 6_2:-72174173 Msa0927680:CDS
CTCATAATAATGTAGGACAA+TGG 0.560712 6_2:-72175443 Msa0927680:CDS
AACTTACATGTGTTTGTACA+CGG 0.562698 6_2:+72173375 None:intergenic
TTCGGATGCCCCTGTCCTGT+GGG 0.563942 6_2:+72175207 None:intergenic
TCTCTAACAGGTCGGACCAC+GGG 0.565901 6_2:+72176670 None:intergenic
GTTCCTACGGTAGGCAGTGG+TGG 0.566137 6_2:+72174213 None:intergenic
CAAAACAGGTTGAGGCACAC+TGG 0.567944 6_2:+72175775 None:intergenic
ATAGAGAGATTGAATGAAGG+GGG 0.568072 6_2:-72173180 Msa0927680:three_prime_UTR
ATGCATGTGGTGGATAACCC+AGG 0.569423 6_2:+72174175 None:intergenic
TTGACAACTGGAGGACGACC+GGG 0.570980 6_2:+72176790 None:intergenic
ATGGATTGCCTAGGTTCGGA+GGG 0.571131 6_2:+72174088 None:intergenic
AAACATGCTTAACAAACTCT+CGG 0.571606 6_2:+72177206 None:intergenic
TCTAACCCCTTCCCCAAAGG+AGG 0.572129 6_2:-72173464 Msa0927680:CDS
ATACTTTCAGGGTCATACGC+TGG 0.572536 6_2:-72173932 Msa0927680:intron
GCATATGATGACGATGGGGT+TGG 0.573061 6_2:+72174051 None:intergenic
AAGTTACAAATGCATAATGA+AGG 0.574078 6_2:-72173328 Msa0927680:three_prime_UTR
CTGTGTCAGTGATGAAGCAT+CGG 0.574879 6_2:+72176579 None:intergenic
TGGCAAATGGGTCCTCCGCA+GGG 0.576406 6_2:-72174918 Msa0927680:CDS
GGGCTCTTCAAGCCCACCCG+TGG 0.576424 6_2:-72176686 Msa0927680:CDS
GATTTGTGATGACCGGCTCT+GGG 0.577411 6_2:-72173306 Msa0927680:three_prime_UTR
AATATACTATCTTGGATAAG+GGG 0.577936 6_2:-72173226 Msa0927680:three_prime_UTR
TCAACAATTTCCACCGTCAG+TGG 0.578286 6_2:-72175376 Msa0927680:CDS
GCTGAGAAATTGCCAAAACT+AGG 0.579045 6_2:+72175504 None:intergenic
AGGAGAGTTGAGGCATATCA+GGG 0.582512 6_2:-72176937 Msa0927680:CDS
ATTACGCACCCTCCGAACCT+AGG 0.582738 6_2:-72174096 Msa0927680:CDS
AATCTCCATCTGATACTCTA+CGG 0.582978 6_2:+72176749 None:intergenic
GAACTGGAGCAGGAAAGTAC+TGG 0.583420 6_2:+72174946 None:intergenic
ATTTCCTCCTTCTTGAAGTG+CGG 0.583644 6_2:+72177491 None:intergenic
AGGCATGGGATGGATTGCCT+AGG 0.584344 6_2:+72174079 None:intergenic
ACGGTTCCTACGGTAGGCAG+TGG 0.584624 6_2:+72174210 None:intergenic
AGAAATGTTGAAGTTCTGGA+AGG 0.584790 6_2:+72181629 None:intergenic
CTGATGCATATGATGACGAT+GGG 0.584853 6_2:+72174046 None:intergenic
ACTGTTTATTCCTATAGGAG+GGG 0.584994 6_2:-72173254 Msa0927680:three_prime_UTR
ATCTCTAACAGGTCGGACCA+CGG 0.585179 6_2:+72176669 None:intergenic
TTTCCGCTGTTTGGTTTGGG+GGG 0.588613 6_2:+72176607 None:intergenic
GAAGACCGTAGAGTATCAGA+TGG 0.589229 6_2:-72176754 Msa0927680:CDS
CGCCAATCATTGACAACTGG+AGG 0.591446 6_2:+72176781 None:intergenic
GGCTGTGAATAACTTGGCAC+AGG 0.592606 6_2:+72174637 None:intergenic
AATAAGAAACAACGACTGAA+GGG 0.593061 6_2:+72173148 None:intergenic
CGAATGGATTCCCTCCTTTG+GGG 0.593184 6_2:+72173453 None:intergenic
TGGACTCCTGGAGCATGAGA+AGG 0.593576 6_2:+72175620 None:intergenic
GGAACCTTGAAAGGATGGCA+GGG 0.595041 6_2:+72174143 None:intergenic
GGCACTGAAGTGCCACTGGG+TGG 0.595804 6_2:+72175477 None:intergenic
CCCGAACGAGCTAGAGACCT+GGG 0.598543 6_2:-72176706 Msa0927680:CDS
AGCTCTAACCCCTTCCCCAA+AGG 0.598694 6_2:-72173467 Msa0927680:CDS
TATGGTGACAGGTCTAGTCC+AGG 0.598747 6_2:-72176871 Msa0927680:CDS
GCTGTAGAAGTTAAACCAAG+TGG 0.599496 6_2:-72175105 Msa0927680:CDS
TCCAATGCAATATAATAATG+TGG 0.602071 6_2:-72174892 Msa0927680:CDS
GGTGGAGTCCATGCATGTGG+TGG 0.602942 6_2:+72174165 None:intergenic
TAACAGGTCGGACCACGGGT+GGG 0.604829 6_2:+72176674 None:intergenic
AATCTTACGACCTTTCCTCT+CGG 0.609041 6_2:+72177139 None:intergenic
GGAGGGTGCGTAATGCCTGA+AGG 0.609235 6_2:+72174105 None:intergenic
TCCCGAACGAGCTAGAGACC+TGG 0.613069 6_2:-72176707 Msa0927680:CDS
TATCCAGGACTTCTTCCACC+TGG 0.614393 6_2:+72176853 None:intergenic
ATCTACTGTTACAAATACAT+GGG 0.614768 6_2:+72173110 None:intergenic
TGCATTGGAAAGCCCTGCGG+AGG 0.614805 6_2:+72174906 None:intergenic
GTAATGTAAAGAATTATCCA+TGG 0.614944 6_2:-72173429 Msa0927680:exon
CTAACAGGTCGGACCACGGG+TGG 0.615242 6_2:+72176673 None:intergenic
GAAGTTACCGCACTTCAAGA+AGG 0.615478 6_2:-72177498 Msa0927680:CDS
CCAAAATATCTCTAACAGGT+CGG 0.617155 6_2:+72176662 None:intergenic
TTCTCAGCTTTCCCACCCAG+TGG 0.617961 6_2:-72175489 Msa0927680:CDS
CGATGCTTCATCACTGACAC+AGG 0.618098 6_2:-72176578 Msa0927680:intron
CTAGCAGAAGCAGGGAACGT+TGG 0.618799 6_2:+72175399 None:intergenic
AGTTGGGAATTTCGGAACTG+AGG 0.619777 6_2:-72173552 Msa0927680:CDS
CTTACGACCTTTCCTCTCGG+TGG 0.622626 6_2:+72177142 None:intergenic
GGTGAAGAGTGAAAACGGAA+AGG 0.622706 6_2:+72181678 None:intergenic
AGAAGTTGTTGTTAGAGATG+GGG 0.624985 6_2:-72181338 Msa0927680:exon
TGGAGCAACAGGTTCAGGAT+CGG 0.626425 6_2:+72175820 None:intergenic
TGACAAACCACCGAGAGGAA+AGG 0.627098 6_2:-72177149 Msa0927680:CDS
GAAGCCCAATTGTCATCACT+GGG 0.627573 6_2:+72175740 None:intergenic
CATGCACCTTCTGTACCCAC+AGG 0.628811 6_2:-72175222 Msa0927680:CDS
CAAGTTATTCACAGCCGTCA+AGG 0.628835 6_2:-72174630 Msa0927680:CDS
CAACAATTTCCACCGTCAGT+GGG 0.629584 6_2:-72175375 Msa0927680:CDS
TCATATGCATCAGTCCCACC+AGG 0.629975 6_2:-72174036 Msa0927680:intron
CTAACCCCTTCCCCAAAGGA+GGG 0.631904 6_2:-72173463 Msa0927680:CDS
CAACTAATATACCAATGCCA+AGG 0.633465 6_2:-72173898 Msa0927680:intron
ATCAGATGGAGATTATAAGG+TGG 0.635684 6_2:-72176740 Msa0927680:CDS
TGAAGGTGGTACATTAGGCA+GGG 0.636868 6_2:+72174122 None:intergenic
CTATGAAAACAGGAGAGTTG+AGG 0.640259 6_2:-72176947 Msa0927680:CDS
GAACCTTGAAAGGATGGCAG+GGG 0.640950 6_2:+72174144 None:intergenic
TGGGACAAAACAGATTCAAG+CGG 0.641329 6_2:+72175665 None:intergenic
CCCTCCATACGAAGACACAC+AGG 0.642212 6_2:-72176902 Msa0927680:CDS
ACCCAGGGTTGAAGACTGCA+CGG 0.643062 6_2:+72174191 None:intergenic
TTGAAAGTCACATACACTTG+GGG 0.645670 6_2:+72174561 None:intergenic
CAATTTCCACCGTCAGTGGG+TGG 0.648109 6_2:-72175372 Msa0927680:CDS
CCGTGCAAGGAAGACATGGA+AGG 0.650622 6_2:+72174309 None:intergenic
TTATTATGAGGTGATACGGA+TGG 0.654263 6_2:+72175456 None:intergenic
ATTGTTGACTAGCAGAAGCA+GGG 0.663307 6_2:+72175391 None:intergenic
ACAGGATAAACATACCTGGT+GGG 0.664986 6_2:+72174022 None:intergenic
GGTACAGAAGGTGCATGCAA+TGG 0.666830 6_2:+72175228 None:intergenic
ACTGGATACCAAGCTGCCAG+AGG 0.668169 6_2:+72175901 None:intergenic
GTTACCGCACTTCAAGAAGG+AGG 0.668810 6_2:-72177495 Msa0927680:CDS
TTTACAGCACCACCCACTGA+CGG 0.672082 6_2:+72175363 None:intergenic
AATCCACCACTGCCTACCGT+AGG 0.677678 6_2:-72174216 Msa0927680:CDS
GGTGACAGGTCTAGTCCAGG+TGG 0.685795 6_2:-72176868 Msa0927680:CDS
GATGGCACTGAAGTGCCACT+GGG 0.689606 6_2:+72175474 None:intergenic
ACAGCACCACCCACTGACGG+TGG 0.689920 6_2:+72175366 None:intergenic
AATGCAATATAATAATGTGG+CGG 0.690651 6_2:-72174889 Msa0927680:intron
GCACTGAAGTGCCACTGGGT+GGG 0.693382 6_2:+72175478 None:intergenic
ACTGATGCATATGATGACGA+TGG 0.699854 6_2:+72174045 None:intergenic
TATTGCATTGGAAAGCCCTG+CGG 0.701173 6_2:+72174903 None:intergenic
TGCATGTGGTGGATAACCCA+GGG 0.705185 6_2:+72174176 None:intergenic
ACCTCTGACAAACCACCGAG+AGG 0.706606 6_2:-72177154 Msa0927680:CDS
GAGGCATGATGGTATGCATG+TGG 0.707104 6_2:+72175174 None:intergenic
CTTCTGTACCCACAGGACAG+GGG 0.715786 6_2:-72175215 Msa0927680:CDS
AGAGTTGAGGCATATCAGGG+AGG 0.741370 6_2:-72176934 Msa0927680:CDS
AGAAGGTAAAGATTCCGACA+CGG 0.756226 6_2:+72175637 None:intergenic
TGATGCATATGATGACGATG+GGG 0.769784 6_2:+72174047 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTAATTTTTTTATAGTT+TGG + chr6_2:72174882-72174901 None:intergenic 10.0%
!!! AGATTTTTATATTAGATTTT+GGG - chr6_2:72175907-72175926 Msa0927680:CDS 10.0%
!! AAAGAAAATAATTAATGTAA+CGG + chr6_2:72176531-72176550 None:intergenic 10.0%
!!! AACTTTTTATTAAATAGAAT+AGG + chr6_2:72178281-72178300 None:intergenic 10.0%
!! ATTAAACAGTAAATTAAAAA+CGG + chr6_2:72178573-72178592 None:intergenic 10.0%
!!! TTCTTTTTAATTAAAAAGAA+AGG + chr6_2:72179924-72179943 None:intergenic 10.0%
!!! TTGTTTCTTATTAAATTTTT+GGG - chr6_2:72181545-72181564 Msa0927680:intron 10.0%
!! AAATGAATTACATTAGATTA+TGG - chr6_2:72173496-72173515 Msa0927680:CDS 15.0%
!!! AAAATTGCTATTTTTTTGTT+GGG + chr6_2:72174043-72174062 None:intergenic 15.0%
!!! TTGCTATTTTTTAAAGATAA+GGG + chr6_2:72174099-72174118 None:intergenic 15.0%
!!! ATTGCTATTTTTTAAAGATA+AGG + chr6_2:72174100-72174119 None:intergenic 15.0%
!!! AAATTGCTATTTTTTTTTGT+TGG - chr6_2:72174189-72174208 Msa0927680:CDS 15.0%
!!! AATTGCTATTTTTTTTTGTT+GGG - chr6_2:72174190-72174209 Msa0927680:CDS 15.0%
!! TTGTAAAAATAAGTTATGAT+AGG - chr6_2:72175724-72175743 Msa0927680:CDS 15.0%
!!! GAGATTTTTATATTAGATTT+TGG - chr6_2:72175906-72175925 Msa0927680:CDS 15.0%
!!! ATAAGATTTTCTTATTAGTT+AGG - chr6_2:72176104-72176123 Msa0927680:intron 15.0%
!!! TAAGATTTTCTTATTAGTTA+GGG - chr6_2:72176105-72176124 Msa0927680:intron 15.0%
!!! TTAAAATTGGATGTTATTTA+TGG - chr6_2:72176137-72176156 Msa0927680:intron 15.0%
!!! TAGATTTTATTTCAAAGATA+AGG - chr6_2:72176206-72176225 Msa0927680:intron 15.0%
!! TCAAATTTATCTCTTTATTA+AGG + chr6_2:72176456-72176475 None:intergenic 15.0%
!!! ATTTTCTTTTATACTTTTGA+AGG - chr6_2:72176542-72176561 Msa0927680:intron 15.0%
!!! TTTTCTTTTATACTTTTGAA+GGG - chr6_2:72176543-72176562 Msa0927680:intron 15.0%
!!! AAGAGATTTATTTTAAAGAA+TGG - chr6_2:72177326-72177345 Msa0927680:CDS 15.0%
!!! AGAGATTTATTTTAAAGAAT+GGG - chr6_2:72177327-72177346 Msa0927680:CDS 15.0%
!! TTATGATTAATAATCATAGA+GGG - chr6_2:72179898-72179917 Msa0927680:intron 15.0%
!!! TTGTGTTTTATATGAATAAA+GGG + chr6_2:72180964-72180983 None:intergenic 15.0%
!!! ATTGTGTTTTATATGAATAA+AGG + chr6_2:72180965-72180984 None:intergenic 15.0%
!!! TAAAATTGATGATAATAGAT+TGG - chr6_2:72181053-72181072 Msa0927680:intron 15.0%
!!! GTTGTTTCTTATTAAATTTT+TGG - chr6_2:72181544-72181563 Msa0927680:intron 15.0%
!! AAAAATTGAAATGAAATGAC+GGG + chr6_2:72172945-72172964 None:intergenic 20.0%
!! GAAAAATTGAAATGAAATGA+CGG + chr6_2:72172946-72172965 None:intergenic 20.0%
!! ATGTATTAACTGTAATAGTT+TGG - chr6_2:72173438-72173457 Msa0927680:exon 20.0%
!! ATTACGTTAAAATAGATTCT+AGG - chr6_2:72173998-72174017 Msa0927680:intron 20.0%
!!! AAATTGCTATTTTTTTGTTG+GGG + chr6_2:72174042-72174061 None:intergenic 20.0%
!!! CAAAATTGCTATTTTTTTGT+TGG + chr6_2:72174044-72174063 None:intergenic 20.0%
!!! CAACAAAAAAATAGCAATTT+TGG - chr6_2:72174042-72174061 Msa0927680:CDS 20.0%
!!! TGCTTTTTTTTAAAGATAGA+GGG + chr6_2:72174068-72174087 None:intergenic 20.0%
!!! TCTTTAAAAAAAAGCACTTT+TGG - chr6_2:72174072-72174091 Msa0927680:CDS 20.0%
!!! TGCTATTTTTTAAAGATAAG+GGG + chr6_2:72174098-72174117 None:intergenic 20.0%
!!! ATTGCTATTTTTTTTTGTTG+GGG - chr6_2:72174191-72174210 Msa0927680:CDS 20.0%
!! TTGAATGAAGAAAATGAATT+AGG - chr6_2:72174401-72174420 Msa0927680:intron 20.0%
!! TGAATGAAGAAAATGAATTA+GGG - chr6_2:72174402-72174421 Msa0927680:intron 20.0%
!!! TAATTGTTATTACAATTAGC+TGG - chr6_2:72174428-72174447 Msa0927680:intron 20.0%
!! ATTGAATGAGAAAAATGAAT+TGG - chr6_2:72173837-72173856 Msa0927680:intron 20.0%
!!! TATTTTAATAAGTAGTTCAC+TGG - chr6_2:72175767-72175786 Msa0927680:CDS 20.0%
!!! ATTTTAATAAGTAGTTCACT+GGG - chr6_2:72175768-72175787 Msa0927680:CDS 20.0%
!!! AAGATTTTCTTATTAGTTAG+GGG - chr6_2:72176106-72176125 Msa0927680:intron 20.0%
!!! GTTGTGTGATATTTTTATTT+AGG - chr6_2:72176170-72176189 Msa0927680:intron 20.0%
!! ATACATAATATGCATAATTG+AGG + chr6_2:72176260-72176279 None:intergenic 20.0%
!!! TACATTTTAAAATGGCAATA+TGG + chr6_2:72178155-72178174 None:intergenic 20.0%
!! ATAAAAAGTTGAATTTCAGA+TGG - chr6_2:72178291-72178310 Msa0927680:intron 20.0%
!!! TGGGATATTTTATTTATGAA+TGG - chr6_2:72178413-72178432 Msa0927680:intron 20.0%
!! GTAAAATATTGTTTAGCTAA+TGG - chr6_2:72179371-72179390 Msa0927680:intron 20.0%
!!! ATTATTAATCATAAGGTGTT+TGG + chr6_2:72179892-72179911 None:intergenic 20.0%
!! CTCTATGATTATTAATCATA+AGG + chr6_2:72179899-72179918 None:intergenic 20.0%
!! CTTATGATTAATAATCATAG+AGG - chr6_2:72179897-72179916 Msa0927680:intron 20.0%
!! ACAAATTAAAAACATGCATT+TGG + chr6_2:72179971-72179990 None:intergenic 20.0%
!!! AAATGCATGTTTTTAATTTG+TGG - chr6_2:72179970-72179989 Msa0927680:intron 20.0%
!!! ACATGATTATTTTAATGTTG+TGG - chr6_2:72181687-72181706 Msa0927680:five_prime_UTR 20.0%
! GGGTTTATATATGATGATTA+TGG + chr6_2:72173028-72173047 None:intergenic 25.0%
!!! TTTTAAAGCTTGAACCAAAT+CGG - chr6_2:72173413-72173432 Msa0927680:three_prime_UTR 25.0%
! ACATAATTCAATGTAATCAC+AGG + chr6_2:72173684-72173703 None:intergenic 25.0%
!!! GTGCTTTTTTTTAAAGATAG+AGG + chr6_2:72174069-72174088 None:intergenic 25.0%
!!! TTGCTATTTTTTTTTGTTGG+GGG - chr6_2:72174192-72174211 Msa0927680:CDS 25.0%
!!! CTTTTAAAAACTTGCGATTT+TGG + chr6_2:72174219-72174238 None:intergenic 25.0%
!!! ATCGCAAGTTTTTAAAAGTT+AGG - chr6_2:72174221-72174240 Msa0927680:CDS 25.0%
!!! TCGCAAGTTTTTAAAAGTTA+GGG - chr6_2:72174222-72174241 Msa0927680:CDS 25.0%
! TTAGCTGGATTAATATATAG+TGG - chr6_2:72174443-72174462 Msa0927680:intron 25.0%
! AGTTCAATTAGTTAGTTAGT+TGG + chr6_2:72174484-72174503 None:intergenic 25.0%
! TTAGTGTCATGATTAGAAAA+AGG - chr6_2:72174727-72174746 Msa0927680:intron 25.0%
! TCAATTAGCTGAATATATAG+TGG - chr6_2:72175373-72175392 Msa0927680:CDS 25.0%
! AATGTTCAACCATTTACAAA+TGG + chr6_2:72175616-72175635 None:intergenic 25.0%
!! TTTTAATAAGTAGTTCACTG+GGG - chr6_2:72175769-72175788 Msa0927680:CDS 25.0%
!!! GTCTATGGTCTTTTTTATTT+AGG - chr6_2:72175827-72175846 Msa0927680:CDS 25.0%
!!! CTTTTTTATTTAGGCGTAAA+TGG - chr6_2:72175836-72175855 Msa0927680:CDS 25.0%
! TATTTCAAAGATAAGGTCAT+TGG - chr6_2:72176213-72176232 Msa0927680:intron 25.0%
! ATTTCAAAGATAAGGTCATT+GGG - chr6_2:72176214-72176233 Msa0927680:intron 25.0%
! TATTTCATTTCAATCTTCAC+AGG - chr6_2:72176301-72176320 Msa0927680:intron 25.0%
! AGTTATTAACCTTGTGATTA+TGG + chr6_2:72176382-72176401 None:intergenic 25.0%
!! TCTGTTTGAATTCTTTTCAT+AGG - chr6_2:72176477-72176496 Msa0927680:intron 25.0%
!!! ATTTGTTTCTAATCCATACT+TGG - chr6_2:72176763-72176782 Msa0927680:CDS 25.0%
!!! TTTTGTAGTGTTGTTTGTAA+TGG - chr6_2:72176874-72176893 Msa0927680:CDS 25.0%
! AAGCAGAATGAAAAGAAATA+TGG + chr6_2:72177250-72177269 None:intergenic 25.0%
! ATCATTCTGATTGTCATATT+TGG - chr6_2:72177432-72177451 Msa0927680:intron 25.0%
! TTTCTTAAAAAAGTGAATCC+TGG + chr6_2:72177576-72177595 None:intergenic 25.0%
!!! ATAATGATAGCATTAGCTTT+TGG - chr6_2:72178393-72178412 Msa0927680:intron 25.0%
!!! TAATGATAGCATTAGCTTTT+GGG - chr6_2:72178394-72178413 Msa0927680:intron 25.0%
! TAAATAATGAATCAACCTCA+CGG + chr6_2:72178465-72178484 None:intergenic 25.0%
!! ATGTTTTCAGTTATTCCTTT+GGG - chr6_2:72178516-72178535 Msa0927680:intron 25.0%
!!! TTATGTTTTCTTTTAAGACG+TGG - chr6_2:72178615-72178634 Msa0927680:intron 25.0%
!! CATTTGTCATTTACTTTGTT+TGG - chr6_2:72178643-72178662 Msa0927680:intron 25.0%
! TCTCAAATTTAATCTCTACT+TGG + chr6_2:72178815-72178834 None:intergenic 25.0%
! TACATTATTATGAGGTGATA+CGG + chr6_2:72179233-72179252 None:intergenic 25.0%
! TCATAATAATGTAGGACAAT+GGG - chr6_2:72179240-72179259 Msa0927680:intron 25.0%
!! ATTTTACATGACAAGTTCAT+TGG + chr6_2:72179358-72179377 None:intergenic 25.0%
! TCCAATGCAATATAATAATG+TGG - chr6_2:72179790-72179809 Msa0927680:intron 25.0%
! AATGCAATATAATAATGTGG+CGG - chr6_2:72179793-72179812 Msa0927680:intron 25.0%
! ATGTGACTTTCAATGATTTA+TGG - chr6_2:72180131-72180150 Msa0927680:intron 25.0%
!!! TTTTTTTACATGCGATTCAT+TGG - chr6_2:72180313-72180332 Msa0927680:intron 25.0%
! ATTAACTGACGAATATTAAC+AGG + chr6_2:72180681-72180700 None:intergenic 25.0%
! GTAATGTAAAGAATTATCCA+TGG - chr6_2:72181253-72181272 Msa0927680:CDS 25.0%
! GTTTGAATTTACAAAAACCA+TGG + chr6_2:72181273-72181292 None:intergenic 25.0%
! AAGTTACAAATGCATAATGA+AGG - chr6_2:72181354-72181373 Msa0927680:five_prime_UTR 25.0%
! TGTAAACTGTTTATTCCTAT+AGG - chr6_2:72181423-72181442 Msa0927680:five_prime_UTR 25.0%
! ACAATATACTATCTTGGATA+AGG - chr6_2:72181454-72181473 Msa0927680:intron 25.0%
! CAATATACTATCTTGGATAA+GGG - chr6_2:72181455-72181474 Msa0927680:intron 25.0%
! AATATACTATCTTGGATAAG+GGG - chr6_2:72181456-72181475 Msa0927680:intron 25.0%
! ATCTACTGTTACAAATACAT+GGG + chr6_2:72181575-72181594 None:intergenic 25.0%
! AATCTACTGTTACAAATACA+TGG + chr6_2:72181576-72181595 None:intergenic 25.0%
!! TAATGGTGTCTTCATATTTT+TGG - chr6_2:72181601-72181620 Msa0927680:five_prime_UTR 25.0%
AAGAAAGAAAGAGAGAGAAA+CGG + chr6_2:72172978-72172997 None:intergenic 30.0%
ATTATGGTGAAGAGTGAAAA+CGG + chr6_2:72173012-72173031 None:intergenic 30.0%
AGAAGATGAAGAAGAAGAAA+CGG + chr6_2:72173081-72173100 None:intergenic 30.0%
ATGATGATTGAAATTGCGTT+TGG - chr6_2:72173296-72173315 Msa0927680:three_prime_UTR 30.0%
! AAGAAGTTGTTGTTAGAGAT+GGG - chr6_2:72173343-72173362 Msa0927680:three_prime_UTR 30.0%
TGGTATATTTGTGTTGAATG+AGG - chr6_2:72173516-72173535 Msa0927680:CDS 30.0%
GCTGAATATATTGTAGTAGT+TGG - chr6_2:72173580-72173599 Msa0927680:intron 30.0%
TGTTTGTTTATGTGCTTCAT+AGG - chr6_2:72173765-72173784 Msa0927680:intron 30.0%
! CTTACACAGTTGAAATTTTG+CGG - chr6_2:72173919-72173938 Msa0927680:CDS 30.0%
AAAACATTGCAAAACTGCAA+AGG + chr6_2:72174152-72174171 None:intergenic 30.0%
! TTGCAATGTTTTGTAAAGCT+AGG - chr6_2:72174160-72174179 Msa0927680:CDS 30.0%
! TGCAATGTTTTGTAAAGCTA+GGG - chr6_2:72174161-72174180 Msa0927680:CDS 30.0%
!! CGCAAGTTTTTAAAAGTTAG+GGG - chr6_2:72174223-72174242 Msa0927680:CDS 30.0%
!! GCAAGTTTTTAAAAGTTAGG+GGG - chr6_2:72174224-72174243 Msa0927680:CDS 30.0%
!! ATCTAGCTTAAATGCACTTT+TGG + chr6_2:72174250-72174269 None:intergenic 30.0%
!! AAAATAACTAAGAAGCATCG+AGG - chr6_2:72174511-72174530 Msa0927680:intron 30.0%
TAGTATCACACATAACACAT+TGG + chr6_2:72174687-72174706 None:intergenic 30.0%
GTAAAGAATCAGAGAAGATA+TGG - chr6_2:72175015-72175034 Msa0927680:intron 30.0%
TGCAAAATATTGTGCAATAG+CGG + chr6_2:72175239-72175258 None:intergenic 30.0%
! AGTGTTTAAAGTCAATGAGT+TGG + chr6_2:72175447-72175466 None:intergenic 30.0%
TTGACTTTAAACACTCTCTT+AGG - chr6_2:72175452-72175471 Msa0927680:CDS 30.0%
ATAGTCTGTCCATTTGTAAA+TGG - chr6_2:72175604-72175623 Msa0927680:intron 30.0%
TTACAAGACTATCTCATATC+AGG + chr6_2:72175710-72175729 None:intergenic 30.0%
ATAAGTTATGATAGGTCCAT+AGG - chr6_2:72175732-72175751 Msa0927680:CDS 30.0%
AATAAGCCAAAAACAACCTA+TGG + chr6_2:72175751-72175770 None:intergenic 30.0%
! AGGCGTAAATGGTTTAAAAT+TGG - chr6_2:72175847-72175866 Msa0927680:CDS 30.0%
! ACCCTTTTATATCATGCATT+CGG - chr6_2:72175935-72175954 Msa0927680:intron 30.0%
ACCGAATGCATGATATAAAA+GGG + chr6_2:72175939-72175958 None:intergenic 30.0%
AACCGAATGCATGATATAAA+AGG + chr6_2:72175940-72175959 None:intergenic 30.0%
TCTTATTAGTTAGGGGTAAA+TGG - chr6_2:72176113-72176132 Msa0927680:intron 30.0%
! AGGGGTAAATGGTTTAAAAT+TGG - chr6_2:72176124-72176143 Msa0927680:intron 30.0%
! ATTGGATGTTATTTATGGAC+AGG - chr6_2:72176142-72176161 Msa0927680:intron 30.0%
TTTCAAAGATAAGGTCATTG+GGG - chr6_2:72176215-72176234 Msa0927680:intron 30.0%
AAATTTGTGCACACATATTG+TGG + chr6_2:72176570-72176589 None:intergenic 30.0%
AATATGTGTGCACAAATTTC+TGG - chr6_2:72176571-72176590 Msa0927680:intron 30.0%
TTTGTTTGCACTAATTGTAG+TGG - chr6_2:72176597-72176616 Msa0927680:CDS 30.0%
TGTATTCAACTCAAATCACA+GGG + chr6_2:72176680-72176699 None:intergenic 30.0%
ATGTATTCAACTCAAATCAC+AGG + chr6_2:72176681-72176700 None:intergenic 30.0%
! AATACATGTTTCAGAGTACT+TGG - chr6_2:72176694-72176713 Msa0927680:CDS 30.0%
CAAAAAATCAGTAATACTGC+TGG + chr6_2:72176733-72176752 None:intergenic 30.0%
TCTGCAACTATACATGAAAA+CGG + chr6_2:72177400-72177419 None:intergenic 30.0%
AAACATGCTTAACAAACTCT+CGG + chr6_2:72177479-72177498 None:intergenic 30.0%
! GTTTGTTAAGCATGTTTATG+AGG - chr6_2:72177482-72177501 Msa0927680:intron 30.0%
TTAAGCATGTTTATGAGGAT+AGG - chr6_2:72177487-72177506 Msa0927680:intron 30.0%
TTAAAAAAGTGAATCCTGGA+GGG + chr6_2:72177572-72177591 None:intergenic 30.0%
AGAACAGACTAAGTAAGAAT+TGG + chr6_2:72177677-72177696 None:intergenic 30.0%
AGTATCAGATGGAGATTATA+AGG - chr6_2:72177939-72177958 Msa0927680:intron 30.0%
GAGAAAATGTAATACCTCTT+AGG - chr6_2:72178043-72178062 Msa0927680:intron 30.0%
! GATGTTTTCAGTTATTCCTT+TGG - chr6_2:72178515-72178534 Msa0927680:intron 30.0%
! TTCAAGCGGATTTAAATTTG+AGG + chr6_2:72179006-72179025 None:intergenic 30.0%
TTACAATATGTGTATCACCT+TGG + chr6_2:72179085-72179104 None:intergenic 30.0%
AGGTGATACACATATTGTAA+TGG - chr6_2:72179085-72179104 Msa0927680:intron 30.0%
GTATCACCTCATAATAATGT+AGG - chr6_2:72179232-72179251 Msa0927680:intron 30.0%
CATTGTCCTACATTATTATG+AGG + chr6_2:72179241-72179260 None:intergenic 30.0%
CTCATAATAATGTAGGACAA+TGG - chr6_2:72179239-72179258 Msa0927680:intron 30.0%
GTATTAATTTCACTCTGTTC+TGG - chr6_2:72179418-72179437 Msa0927680:intron 30.0%
CTAATTGTTAGCCAAACAAT+AGG + chr6_2:72179681-72179700 None:intergenic 30.0%
GCCACATTATTATATTGCAT+TGG + chr6_2:72179794-72179813 None:intergenic 30.0%
ATTGAAAGTCACATACACTT+GGG + chr6_2:72180125-72180144 None:intergenic 30.0%
AATGCAAGATGCTAACTTTA+TGG + chr6_2:72180187-72180206 None:intergenic 30.0%
! TCACAGTATATTGTTTCTCT+TGG - chr6_2:72180341-72180360 Msa0927680:intron 30.0%
ATTAACAGGATAAACATACC+TGG + chr6_2:72180667-72180686 None:intergenic 30.0%
!! TGAAAGTATTAACATGGTTC+AGG + chr6_2:72180739-72180758 None:intergenic 30.0%
TGAACCATGTTAATACTTTC+AGG - chr6_2:72180738-72180757 Msa0927680:intron 30.0%
GAACCATGTTAATACTTTCA+GGG - chr6_2:72180739-72180758 Msa0927680:intron 30.0%
GATTGAAGAGAAATTTACCT+TGG + chr6_2:72180804-72180823 None:intergenic 30.0%
ATGTATGGGAAATTAGATGA+AGG + chr6_2:72180908-72180927 None:intergenic 30.0%
ATCGCAATATTTCAAAAGCT+AGG + chr6_2:72181006-72181025 None:intergenic 30.0%
!!! TAGCTTTTGAAATATTGCGA+TGG - chr6_2:72181005-72181024 Msa0927680:intron 30.0%
!!! AGCTTTTGAAATATTGCGAT+GGG - chr6_2:72181006-72181025 Msa0927680:intron 30.0%
AAGATATTAACTCAATGTGC+AGG - chr6_2:72181102-72181121 Msa0927680:intron 30.0%
AATTCTTTACATTACCCGAA+TGG + chr6_2:72181248-72181267 None:intergenic 30.0%
AACTTACATGTGTTTGTACA+CGG + chr6_2:72181310-72181329 None:intergenic 30.0%
GTACAAACACATGTAAGTTT+CGG - chr6_2:72181311-72181330 Msa0927680:CDS 30.0%
GGTCGAAGTGAAAAATATTT+CGG - chr6_2:72181397-72181416 Msa0927680:five_prime_UTR 30.0%
AAACTGTTTATTCCTATAGG+AGG - chr6_2:72181426-72181445 Msa0927680:five_prime_UTR 30.0%
AACTGTTTATTCCTATAGGA+GGG - chr6_2:72181427-72181446 Msa0927680:five_prime_UTR 30.0%
TAGATAGAGAGATTGAATGA+AGG - chr6_2:72181499-72181518 Msa0927680:intron 30.0%
AGATAGAGAGATTGAATGAA+GGG - chr6_2:72181500-72181519 Msa0927680:intron 30.0%
AATAAGAAACAACGACTGAA+GGG + chr6_2:72181537-72181556 None:intergenic 30.0%
TAATAAGAAACAACGACTGA+AGG + chr6_2:72181538-72181557 None:intergenic 30.0%
TAACAGTAGATTGAGAGTAA+TGG - chr6_2:72181584-72181603 Msa0927680:intron 30.0%
!! AGAAATGTTGAAGTTCTGGA+AGG + chr6_2:72173056-72173075 None:intergenic 35.0%
GGTTAGAAATGTTGAAGTTC+TGG + chr6_2:72173060-72173079 None:intergenic 35.0%
! GAAGAAGTTGTTGTTAGAGA+TGG - chr6_2:72173342-72173361 Msa0927680:three_prime_UTR 35.0%
! AGAAGTTGTTGTTAGAGATG+GGG - chr6_2:72173344-72173363 Msa0927680:three_prime_UTR 35.0%
CAGTTAATACATCTCCGATT+TGG + chr6_2:72173430-72173449 None:intergenic 35.0%
TTCAATGTAATCACAGGTGT+CGG + chr6_2:72173678-72173697 None:intergenic 35.0%
! GCAATGTTTTGTAAAGCTAG+GGG - chr6_2:72174162-72174181 Msa0927680:CDS 35.0%
! CAATGTTTTGTAAAGCTAGG+GGG - chr6_2:72174163-72174182 Msa0927680:CDS 35.0%
AGTTTGGCTAATTCAGTAGT+TGG + chr6_2:72174866-72174885 None:intergenic 35.0%
AAATGCATCTGCGATTCAAT+TGG + chr6_2:72174915-72174934 None:intergenic 35.0%
! TCAAATGTAGAAGCTAGCTT+AGG - chr6_2:72174988-72175007 Msa0927680:intron 35.0%
TTGCACTAAATAGCGTATCA+CGG - chr6_2:72175254-72175273 Msa0927680:intron 35.0%
! TTTTCTCATTCGATCAGTGT+TGG + chr6_2:72175331-72175350 None:intergenic 35.0%
CACTCTCTTAGGTAATAGAT+TGG - chr6_2:72175463-72175482 Msa0927680:CDS 35.0%
TGAATTGCAACTAGCTAACT+TGG - chr6_2:72175525-72175544 Msa0927680:CDS 35.0%
TACAAATGGACAGACTATGT+CGG + chr6_2:72175602-72175621 None:intergenic 35.0%
TCAGGAGATAAGTTCAAATG+AGG + chr6_2:72175692-72175711 None:intergenic 35.0%
!! ATAGGTCCATAGGTTGTTTT+TGG - chr6_2:72175742-72175761 Msa0927680:CDS 35.0%
AAAAGACCATAGACACGTTT+GGG + chr6_2:72175821-72175840 None:intergenic 35.0%
AAAAAGACCATAGACACGTT+TGG + chr6_2:72175822-72175841 None:intergenic 35.0%
TATATCATGCATTCGGTTAG+TGG - chr6_2:72175942-72175961 Msa0927680:intron 35.0%
!! TATCGTCCTCATTTTTGTAG+TGG - chr6_2:72175986-72176005 Msa0927680:intron 35.0%
!! ATCGTCCTCATTTTTGTAGT+GGG - chr6_2:72175987-72176006 Msa0927680:intron 35.0%
!!! ATTTTTGTAGTGGGCAACTT+GGG - chr6_2:72175996-72176015 Msa0927680:intron 35.0%
! ATTACGAGCAGTGCTTTAAA+AGG + chr6_2:72176086-72176105 None:intergenic 35.0%
TTATGTATCATCGTTGCTTG+AGG - chr6_2:72176272-72176291 Msa0927680:intron 35.0%
! TTGTGATTATGGTAGTGTAC+AGG + chr6_2:72176371-72176390 None:intergenic 35.0%
TGTACACTACCATAATCACA+AGG - chr6_2:72176370-72176389 Msa0927680:intron 35.0%
TTCCAATGGAATCTAGAGAA+TGG + chr6_2:72176424-72176443 None:intergenic 35.0%
CTAGATTCCATTGGAAAAAC+AGG - chr6_2:72176428-72176447 Msa0927680:intron 35.0%
!! TAAGGATCCTGTTTTTCCAA+TGG + chr6_2:72176438-72176457 None:intergenic 35.0%
AACAGAAGTAAGATTTGCGT+AGG + chr6_2:72176923-72176942 None:intergenic 35.0%
TACGCAAATCTTACTTCTGT+TGG - chr6_2:72176922-72176941 Msa0927680:CDS 35.0%
!!! CATGAGTTTTGGAGAAAAGT+GGG + chr6_2:72177089-72177108 None:intergenic 35.0%
! CACACAAAAACCATGAGTTT+TGG + chr6_2:72177100-72177119 None:intergenic 35.0%
TCACACGATGTGTAAATTCA+CGG + chr6_2:72177132-72177151 None:intergenic 35.0%
TCGTGTGAAATCAGTTTCAA+TGG - chr6_2:72177144-72177163 Msa0927680:intron 35.0%
CTTAAAAAAGTGAATCCTGG+AGG + chr6_2:72177573-72177592 None:intergenic 35.0%
AAGACGATTCCTATGAAAAC+AGG - chr6_2:72177725-72177744 Msa0927680:intron 35.0%
CTACTTTCTTGATCATATCC+AGG + chr6_2:72177847-72177866 None:intergenic 35.0%
CTGGATATGATCAAGAAAGT+AGG - chr6_2:72177845-72177864 Msa0927680:intron 35.0%
GATCAAGAAAGTAGGCAATA+TGG - chr6_2:72177853-72177872 Msa0927680:intron 35.0%
AATCTCCATCTGATACTCTA+CGG + chr6_2:72177936-72177955 None:intergenic 35.0%
ATCAGATGGAGATTATAAGG+TGG - chr6_2:72177942-72177961 Msa0927680:intron 35.0%
CCAAAATATCTCTAACAGGT+CGG + chr6_2:72178023-72178042 None:intergenic 35.0%
! CGACCTGTTAGAGATATTTT+GGG - chr6_2:72178021-72178040 Msa0927680:intron 35.0%
TCTCCCAAAATATCTCTAAC+AGG + chr6_2:72178027-72178046 None:intergenic 35.0%
GTAATACCTCTTAGGATAAG+TGG - chr6_2:72178051-72178070 Msa0927680:intron 35.0%
ATAGAATAGGCCATTATGAG+TGG + chr6_2:72178268-72178287 None:intergenic 35.0%
TCACGGAAAAGATTAAGACT+CGG + chr6_2:72178448-72178467 None:intergenic 35.0%
GATCGGCATCAAAATCAATA+AGG + chr6_2:72178848-72178867 None:intergenic 35.0%
AAATCCCAGTGATGACAATT+GGG - chr6_2:72178938-72178957 Msa0927680:intron 35.0%
!! TTCTTTTGATGTTGCTTCTG+AGG - chr6_2:72178962-72178981 Msa0927680:intron 35.0%
! GGATTTAAATTTGAGGTGCT+TGG + chr6_2:72178999-72179018 None:intergenic 35.0%
TTATTATGAGGTGATACGGA+TGG + chr6_2:72179229-72179248 None:intergenic 35.0%
TAAGTAGTCACGATTACTTC+AGG + chr6_2:72179616-72179635 None:intergenic 35.0%
ACTTGCATATGCCTATTGTT+TGG - chr6_2:72179667-72179686 Msa0927680:intron 35.0%
GGCTAACAATTAGTTGTGAT+TGG - chr6_2:72179688-72179707 Msa0927680:intron 35.0%
ATCTGGTAAGCTAATCATTC+TGG + chr6_2:72179831-72179850 None:intergenic 35.0%
AAACGCATACTAAGACAATC+TGG + chr6_2:72179848-72179867 None:intergenic 35.0%
AGATTGTCTTAGTATGCGTT+TGG - chr6_2:72179847-72179866 Msa0927680:intron 35.0%
!! AATGGATTTGTTGACCTTGA+CGG + chr6_2:72180069-72180088 None:intergenic 35.0%
TTGAAAGTCACATACACTTG+GGG + chr6_2:72180124-72180143 None:intergenic 35.0%
CATTGAAAGTCACATACACT+TGG + chr6_2:72180126-72180145 None:intergenic 35.0%
! GTTCCAACCTTTTCAATGAT+GGG + chr6_2:72180274-72180293 None:intergenic 35.0%
! TGTTCCAACCTTTTCAATGA+TGG + chr6_2:72180275-72180294 None:intergenic 35.0%
CTGATAAAAAGCAAACGACT+AGG + chr6_2:72180713-72180732 None:intergenic 35.0%
!! TGACCCTGAAAGTATTAACA+TGG + chr6_2:72180745-72180764 None:intergenic 35.0%
CAACTAATATACCAATGCCA+AGG - chr6_2:72180784-72180803 Msa0927680:intron 35.0%
AGAGAAATTTACCTTGGCAT+TGG + chr6_2:72180798-72180817 None:intergenic 35.0%
CTTCTTCGAAACTCGTATTT+GGG - chr6_2:72180876-72180895 Msa0927680:intron 35.0%
TAGCATGAACTTCAATGATG+CGG - chr6_2:72180934-72180953 Msa0927680:intron 35.0%
GTTTCGGTTTCTATTGTTTG+TGG - chr6_2:72181327-72181346 Msa0927680:exon 35.0%
AATGAAGGATTTGTGATGAC+CGG - chr6_2:72181369-72181388 Msa0927680:five_prime_UTR 35.0%
ACTGTTTATTCCTATAGGAG+GGG - chr6_2:72181428-72181447 Msa0927680:five_prime_UTR 35.0%
GATAGAGAGATTGAATGAAG+GGG - chr6_2:72181501-72181520 Msa0927680:intron 35.0%
ATAGAGAGATTGAATGAAGG+GGG - chr6_2:72181502-72181521 Msa0927680:intron 35.0%
!! TGAAGTTCTGGAAGGTTCTT+GGG + chr6_2:72173048-72173067 None:intergenic 40.0%
!! TTGAAGTTCTGGAAGGTTCT+TGG + chr6_2:72173049-72173068 None:intergenic 40.0%
GCACAGACACTTATGATTGA+AGG - chr6_2:72173617-72173636 Msa0927680:intron 40.0%
! TTATGATTGAAGGTGCATCC+TGG - chr6_2:72173627-72173646 Msa0927680:intron 40.0%
GTGACGTGTCTAATAATTGG+GGG + chr6_2:72174128-72174147 None:intergenic 40.0%
CGTGACGTGTCTAATAATTG+GGG + chr6_2:72174129-72174148 None:intergenic 40.0%
GCGTGACGTGTCTAATAATT+GGG + chr6_2:72174130-72174149 None:intergenic 40.0%
AATCTCGTCTCTGATTCTCT+AGG + chr6_2:72174646-72174665 None:intergenic 40.0%
GAATGCAGTGTTGTCAATTG+CGG - chr6_2:72175152-72175171 Msa0927680:CDS 40.0%
TGTTCAAATCCGCTATGCAA+CGG - chr6_2:72175194-72175213 Msa0927680:CDS 40.0%
TTGTGCAATAGCGGCTATAT+TGG + chr6_2:72175230-72175249 None:intergenic 40.0%
TTGGTAAATAGCGGCTATAG+TGG + chr6_2:72175312-72175331 None:intergenic 40.0%
!! CGATCAGTGTTGGTAAATAG+CGG + chr6_2:72175321-72175340 None:intergenic 40.0%
CTAGCTAACTTGGTAGAATG+TGG - chr6_2:72175535-72175554 Msa0927680:intron 40.0%
ACGGGAGCAATCATATCATA+TGG + chr6_2:72175564-72175583 None:intergenic 40.0%
TCGGTTTCACATTGCATGAA+CGG + chr6_2:72175583-72175602 None:intergenic 40.0%
AATGGTTGAACATTAGAGCG+TGG - chr6_2:72175622-72175641 Msa0927680:CDS 40.0%
ATGGTTGAACATTAGAGCGT+GGG - chr6_2:72175623-72175642 Msa0927680:CDS 40.0%
TCTATTCCCAAACGTGTCTA+TGG - chr6_2:72175812-72175831 Msa0927680:CDS 40.0%
TTAGTGGTTAGCAAGGTGAT+AGG - chr6_2:72175958-72175977 Msa0927680:intron 40.0%
AGTTGCCCACTACAAAAATG+AGG + chr6_2:72175995-72176014 None:intergenic 40.0%
!!! CATTTTTGTAGTGGGCAACT+TGG - chr6_2:72175995-72176014 Msa0927680:intron 40.0%
!!! TTTTTGTAGTGGGCAACTTG+GGG - chr6_2:72175997-72176016 Msa0927680:intron 40.0%
! TTATGGTAGTGTACAGGCTA+CGG + chr6_2:72176365-72176384 None:intergenic 40.0%
AATCTAGAGAATGGTGCAAC+AGG + chr6_2:72176415-72176434 None:intergenic 40.0%
CACCATTCTCTAGATTCCAT+TGG - chr6_2:72176419-72176438 Msa0927680:intron 40.0%
! ACATGTTTCAGAGTACTTGG+TGG - chr6_2:72176697-72176716 Msa0927680:CDS 40.0%
GTAATACTGCTGGATAAAGC+AGG + chr6_2:72176723-72176742 None:intergenic 40.0%
!!! CCATGAGTTTTGGAGAAAAG+TGG + chr6_2:72177090-72177109 None:intergenic 40.0%
!! CCACTTTTCTCCAAAACTCA+TGG - chr6_2:72177087-72177106 Msa0927680:intron 40.0%
ATTTCCTCCTTCTTGAAGTG+CGG + chr6_2:72177194-72177213 None:intergenic 40.0%
ACTTCAAGAAGGAGGAAATC+AGG - chr6_2:72177195-72177214 Msa0927680:CDS 40.0%
!! TTGGTGCCAGTAATGTTAAC+AGG - chr6_2:72177451-72177470 Msa0927680:intron 40.0%
TATGAGGATAGGAGATTCAC+TGG - chr6_2:72177498-72177517 Msa0927680:CDS 40.0%
ATAGGAGATTCACTGGAGAT+AGG - chr6_2:72177505-72177524 Msa0927680:CDS 40.0%
AATCTTACGACCTTTCCTCT+CGG + chr6_2:72177546-72177565 None:intergenic 40.0%
! TCTTGTGTTGTGTGTTGTTC+AGG - chr6_2:72177696-72177715 Msa0927680:intron 40.0%
! CTTGTGTTGTGTGTTGTTCA+GGG - chr6_2:72177697-72177716 Msa0927680:intron 40.0%
! CTCAACTCTCCTGTTTTCAT+AGG + chr6_2:72177737-72177756 None:intergenic 40.0%
CTATGAAAACAGGAGAGTTG+AGG - chr6_2:72177735-72177754 Msa0927680:intron 40.0%
! CCGACCTGTTAGAGATATTT+TGG - chr6_2:72178020-72178039 Msa0927680:intron 40.0%
GTTCTAATACCGTGTCATGA+AGG + chr6_2:72178211-72178230 None:intergenic 40.0%
TCTGTCTTTGCCACTCATAA+TGG - chr6_2:72178255-72178274 Msa0927680:intron 40.0%
CACGGAAAAGATTAAGACTC+GGG + chr6_2:72178447-72178466 None:intergenic 40.0%
! GAGTCTTAATCTTTTCCGTG+AGG - chr6_2:72178447-72178466 Msa0927680:intron 40.0%
GAAACATCTCTAATGCCCAA+AGG + chr6_2:72178534-72178553 None:intergenic 40.0%
GAAATCCCAGTGATGACAAT+TGG - chr6_2:72178937-72178956 Msa0927680:intron 40.0%
TGGGACAAAACAGATTCAAG+CGG + chr6_2:72179020-72179039 None:intergenic 40.0%
AGAAGGTAAAGATTCCGACA+CGG + chr6_2:72179048-72179067 None:intergenic 40.0%
! GACTCATCTGTTTTATCTGC+AGG - chr6_2:72179136-72179155 Msa0927680:intron 40.0%
GCTGAGAAATTGCCAAAACT+AGG + chr6_2:72179181-72179200 None:intergenic 40.0%
! ATTGTTGACTAGCAGAAGCA+GGG + chr6_2:72179294-72179313 None:intergenic 40.0%
! AATTGTTGACTAGCAGAAGC+AGG + chr6_2:72179295-72179314 None:intergenic 40.0%
GTGCTGTAAATAGTCAGGTT+TGG - chr6_2:72179332-72179351 Msa0927680:intron 40.0%
CTGTTAAAAGCCTCATTAGC+AGG + chr6_2:72179538-72179557 None:intergenic 40.0%
! GGTTTAACTTCTACAGCAGA+AGG + chr6_2:72179574-72179593 None:intergenic 40.0%
GCTGTAGAAGTTAAACCAAG+TGG - chr6_2:72179577-72179596 Msa0927680:intron 40.0%
CAATTAGTTGTGATTGGTGC+AGG - chr6_2:72179694-72179713 Msa0927680:intron 40.0%
TGTTTACTGCTGACATCGAA+TGG + chr6_2:72180087-72180106 None:intergenic 40.0%
ATACACTTGGGGCTTGATTT+GGG + chr6_2:72180113-72180132 None:intergenic 40.0%
ATGCTCTCCCATCATTGAAA+AGG - chr6_2:72180264-72180283 Msa0927680:intron 40.0%
TCTCCCATCATTGAAAAGGT+TGG - chr6_2:72180268-72180287 Msa0927680:intron 40.0%
! TGATGCATATGATGACGATG+GGG + chr6_2:72180638-72180657 None:intergenic 40.0%
! CTGATGCATATGATGACGAT+GGG + chr6_2:72180639-72180658 None:intergenic 40.0%
! ACTGATGCATATGATGACGA+TGG + chr6_2:72180640-72180659 None:intergenic 40.0%
ACAGGATAAACATACCTGGT+GGG + chr6_2:72180663-72180682 None:intergenic 40.0%
AACAGGATAAACATACCTGG+TGG + chr6_2:72180664-72180683 None:intergenic 40.0%
TAAGCTTAAACAGCATGCAC+AGG + chr6_2:72180843-72180862 None:intergenic 40.0%
GCTTCTTCGAAACTCGTATT+TGG - chr6_2:72180875-72180894 Msa0927680:intron 40.0%
TCATGCTATGCAGCATGTAT+GGG + chr6_2:72180922-72180941 None:intergenic 40.0%
TTCATGCTATGCAGCATGTA+TGG + chr6_2:72180923-72180942 None:intergenic 40.0%
ATTAACTCAATGTGCAGGCA+AGG - chr6_2:72181107-72181126 Msa0927680:intron 40.0%
CGGTTTCTATTGTTTGTGGA+TGG - chr6_2:72181331-72181350 Msa0927680:exon 40.0%
CTGTTTATTCCTATAGGAGG+GGG - chr6_2:72181429-72181448 Msa0927680:intron 40.0%
GGGGAGACAATATACTATCT+TGG - chr6_2:72181448-72181467 Msa0927680:intron 40.0%
GGTGAAGAGTGAAAACGGAA+AGG + chr6_2:72173007-72173026 None:intergenic 45.0%
TGTTGTTAGAGATGGGGACT+CGG - chr6_2:72173350-72173369 Msa0927680:three_prime_UTR 45.0%
GGCGTGACGTGTCTAATAAT+TGG + chr6_2:72174131-72174150 None:intergenic 45.0%
CGGTTTCACATTGCATGAAC+GGG + chr6_2:72175582-72175601 None:intergenic 45.0%
TGGTTGAACATTAGAGCGTG+GGG - chr6_2:72175624-72175643 Msa0927680:CDS 45.0%
AAGTAGTTCACTGGGGTAAG+TGG - chr6_2:72175776-72175795 Msa0927680:CDS 45.0%
CATTCGGTTAGTGGTTAGCA+AGG - chr6_2:72175951-72175970 Msa0927680:intron 45.0%
! TAAGGTCATTGGGGTGTTTG+AGG - chr6_2:72176224-72176243 Msa0927680:intron 45.0%
CATGTGCAAACTGCCAAGTA+TGG + chr6_2:72176779-72176798 None:intergenic 45.0%
AGTTTGCACATGTCTTGCTG+AGG - chr6_2:72176787-72176806 Msa0927680:CDS 45.0%
GAGAAAAGTGGGCAGTTGAA+AGG + chr6_2:72177078-72177097 None:intergenic 45.0%
GAAGTTACCGCACTTCAAGA+AGG - chr6_2:72177184-72177203 Msa0927680:CDS 45.0%
!! GGCACGAGTTTTAGCACAAA+AGG + chr6_2:72177229-72177248 None:intergenic 45.0%
CAAGTACTTACCTGCTGTCA+GGG + chr6_2:72177372-72177391 None:intergenic 45.0%
TCGGAGCCTGTTAACATTAC+TGG + chr6_2:72177460-72177479 None:intergenic 45.0%
! GTCGTAAGATTTTACCCTCC+AGG - chr6_2:72177555-72177574 Msa0927680:CDS 45.0%
AGGAGAGTTGAGGCATATCA+GGG - chr6_2:72177745-72177764 Msa0927680:intron 45.0%
GGCGATTATAAGAGAAGTCC+CGG - chr6_2:72177874-72177893 Msa0927680:intron 45.0%
GTCCTCCAGTTGTCAATGAT+TGG - chr6_2:72177899-72177918 Msa0927680:intron 45.0%
! GAAGACCGTAGAGTATCAGA+TGG - chr6_2:72177928-72177947 Msa0927680:intron 45.0%
!!! TTTTCCGCTGTTTGGTTTGG+GGG + chr6_2:72178079-72178098 None:intergenic 45.0%
!!! CTTTTCCGCTGTTTGGTTTG+GGG + chr6_2:72178080-72178099 None:intergenic 45.0%
!! GCTTTTCCGCTGTTTGGTTT+GGG + chr6_2:72178081-72178100 None:intergenic 45.0%
! AGCTTTTCCGCTGTTTGGTT+TGG + chr6_2:72178082-72178101 None:intergenic 45.0%
CTGTGTCAGTGATGAAGCAT+CGG + chr6_2:72178106-72178125 None:intergenic 45.0%
TGTGTTCAGCCTTCATGACA+CGG - chr6_2:72178199-72178218 Msa0927680:intron 45.0%
AACTCAGCCACCTCACTAAA+GGG + chr6_2:72178702-72178721 None:intergenic 45.0%
TTTCAGAGAACTGCATCCTC+TGG - chr6_2:72178765-72178784 Msa0927680:intron 45.0%
! CTCTACTTGGCTTTCGTTAC+TGG + chr6_2:72178802-72178821 None:intergenic 45.0%
TTGAGGCACACTGGATTGTT+GGG + chr6_2:72178901-72178920 None:intergenic 45.0%
GGATTTCCTGACTGCAAAAC+AGG + chr6_2:72178924-72178943 None:intergenic 45.0%
GAAGCCCAATTGTCATCACT+GGG + chr6_2:72178945-72178964 None:intergenic 45.0%
AGAAGCCCAATTGTCATCAC+TGG + chr6_2:72178946-72178965 None:intergenic 45.0%
TTTGTCCCAATTGTCCGTGT+CGG - chr6_2:72179031-72179050 Msa0927680:intron 45.0%
AGATTCCGACACGGACAATT+GGG + chr6_2:72179039-72179058 None:intergenic 45.0%
AAGATTCCGACACGGACAAT+TGG + chr6_2:72179040-72179059 None:intergenic 45.0%
TCTTTACCTTCTCATGCTCC+AGG - chr6_2:72179056-72179075 Msa0927680:intron 45.0%
TCAACAATTTCCACCGTCAG+TGG - chr6_2:72179306-72179325 Msa0927680:intron 45.0%
CAACAATTTCCACCGTCAGT+GGG - chr6_2:72179307-72179326 Msa0927680:intron 45.0%
TGATGGTATGCATGTGGCAT+TGG + chr6_2:72179505-72179524 None:intergenic 45.0%
GGAAGTTCTGTTCTTCCACT+TGG + chr6_2:72179595-72179614 None:intergenic 45.0%
TACTTTCCTGCTCCAGTTCA+AGG - chr6_2:72179740-72179759 Msa0927680:intron 45.0%
TCCAGTTCAAGGTTGGCAAA+TGG - chr6_2:72179751-72179770 Msa0927680:intron 45.0%
CCAGTTCAAGGTTGGCAAAT+GGG - chr6_2:72179752-72179771 Msa0927680:intron 45.0%
TATTGCATTGGAAAGCCCTG+CGG + chr6_2:72179782-72179801 None:intergenic 45.0%
CTTGACGGCTGTGAATAACT+TGG + chr6_2:72180054-72180073 None:intergenic 45.0%
CAAGTTATTCACAGCCGTCA+AGG - chr6_2:72180052-72180071 Msa0927680:intron 45.0%
! TACACTTGGGGCTTGATTTG+GGG + chr6_2:72180112-72180131 None:intergenic 45.0%
CATACACTTGGGGCTTGATT+TGG + chr6_2:72180114-72180133 None:intergenic 45.0%
ATGCATGCAATGAACTGCTC+TGG + chr6_2:72180444-72180463 None:intergenic 45.0%
AGAGCAGTTCATTGCATGCA+TGG - chr6_2:72180443-72180462 Msa0927680:intron 45.0%
ATTAGGCAGGGAACCTTGAA+AGG + chr6_2:72180551-72180570 None:intergenic 45.0%
TGAAGGTGGTACATTAGGCA+GGG + chr6_2:72180563-72180582 None:intergenic 45.0%
ATGCCTGAAGGTGGTACATT+AGG + chr6_2:72180568-72180587 None:intergenic 45.0%
ATACTTTCAGGGTCATACGC+TGG - chr6_2:72180750-72180769 Msa0927680:intron 45.0%
TACTTTCAGGGTCATACGCT+GGG - chr6_2:72180751-72180770 Msa0927680:intron 45.0%
AGGCAAGGAGTTGGGAATTT+CGG - chr6_2:72181122-72181141 Msa0927680:intron 45.0%
AGTTGGGAATTTCGGAACTG+AGG - chr6_2:72181130-72181149 Msa0927680:intron 45.0%
GTTGGGAATTTCGGAACTGA+GGG - chr6_2:72181131-72181150 Msa0927680:intron 45.0%
GGAACTGAGGGAAACATGTT+CGG - chr6_2:72181143-72181162 Msa0927680:intron 45.0%
ATATTGTCTCCCCCTCCTAT+AGG + chr6_2:72181441-72181460 None:intergenic 45.0%
TCTTGGATAAGGGGAGTTTG+AGG - chr6_2:72181465-72181484 Msa0927680:intron 45.0%
TTCTGAGTCGTGCTCTTTCA+TGG - chr6_2:72181627-72181646 Msa0927680:five_prime_UTR 45.0%
!!! TTTTATATTACATTTTAAAA+TGG + chr6_2:72178163-72178182 None:intergenic 5.0%
!! GTAATCACAGGTGTCGGTCT+TGG + chr6_2:72173672-72173691 None:intergenic 50.0%
GCTATAGCACCGTTGCATAG+CGG + chr6_2:72175206-72175225 None:intergenic 50.0%
TGAACATTAGAGCGTGGGGT+TGG - chr6_2:72175628-72175647 Msa0927680:CDS 50.0%
AGAATGGTGCAACAGGTGCT+GGG + chr6_2:72176408-72176427 None:intergenic 50.0%
GTTACCGCACTTCAAGAAGG+AGG - chr6_2:72177187-72177206 Msa0927680:CDS 50.0%
GCAATTCTTTCCCTGACAGC+AGG - chr6_2:72177359-72177378 Msa0927680:CDS 50.0%
GCAAGTACTTACCTGCTGTC+AGG + chr6_2:72177373-72177392 None:intergenic 50.0%
TGACAAACCACCGAGAGGAA+AGG - chr6_2:72177533-72177552 Msa0927680:CDS 50.0%
CAGGAGAGTTGAGGCATATC+AGG - chr6_2:72177744-72177763 Msa0927680:intron 50.0%
AGAGTTGAGGCATATCAGGG+AGG - chr6_2:72177748-72177767 Msa0927680:intron 50.0%
CCTGTGTGTCTTCGTATGGA+GGG + chr6_2:72177783-72177802 None:intergenic 50.0%
TCCTGTGTGTCTTCGTATGG+AGG + chr6_2:72177784-72177803 None:intergenic 50.0%
CGTTCCTGTGTGTCTTCGTA+TGG + chr6_2:72177787-72177806 None:intergenic 50.0%
GACACACAGGAACGTCGTTA+TGG - chr6_2:72177793-72177812 Msa0927680:intron 50.0%
AGGAACGTCGTTATGGTGAC+AGG - chr6_2:72177800-72177819 Msa0927680:intron 50.0%
TATGGTGACAGGTCTAGTCC+AGG - chr6_2:72177811-72177830 Msa0927680:intron 50.0%
TATCCAGGACTTCTTCCACC+TGG + chr6_2:72177832-72177851 None:intergenic 50.0%
ATTGACAACTGGAGGACGAC+CGG + chr6_2:72177896-72177915 None:intergenic 50.0%
CGCCAATCATTGACAACTGG+AGG + chr6_2:72177904-72177923 None:intergenic 50.0%
CGACGCCAATCATTGACAAC+TGG + chr6_2:72177907-72177926 None:intergenic 50.0%
ATCTCTAACAGGTCGGACCA+CGG + chr6_2:72178016-72178035 None:intergenic 50.0%
!! TTTCCGCTGTTTGGTTTGGG+GGG + chr6_2:72178078-72178097 None:intergenic 50.0%
CGATGCTTCATCACTGACAC+AGG - chr6_2:72178104-72178123 Msa0927680:CDS 50.0%
! AGCATGTCGGCATTGAAGCA+TGG + chr6_2:72178333-72178352 None:intergenic 50.0%
ATGCCGACATGCTCTTCTTG+AGG - chr6_2:72178340-72178359 Msa0927680:intron 50.0%
TGCCGACATGCTCTTCTTGA+GGG - chr6_2:72178341-72178360 Msa0927680:intron 50.0%
! CTCCCTCAAGAAGAGCATGT+CGG + chr6_2:72178346-72178365 None:intergenic 50.0%
TCTCATCTCCCCCTTTAGTG+AGG - chr6_2:72178689-72178708 Msa0927680:intron 50.0%
ACTCAGCCACCTCACTAAAG+GGG + chr6_2:72178701-72178720 None:intergenic 50.0%
CAACTCAGCCACCTCACTAA+AGG + chr6_2:72178703-72178722 None:intergenic 50.0%
TGGAGCAACAGGTTCAGGAT+CGG + chr6_2:72178865-72178884 None:intergenic 50.0%
ACTGTTGGAGCAACAGGTTC+AGG + chr6_2:72178870-72178889 None:intergenic 50.0%
TGAGGAACTGTTGGAGCAAC+AGG + chr6_2:72178876-72178895 None:intergenic 50.0%
TGTTGGGCTTGAGGAACTGT+TGG + chr6_2:72178885-72178904 None:intergenic 50.0%
ACACTGGATTGTTGGGCTTG+AGG + chr6_2:72178894-72178913 None:intergenic 50.0%
GTTGAGGCACACTGGATTGT+TGG + chr6_2:72178902-72178921 None:intergenic 50.0%
! CAAAACAGGTTGAGGCACAC+TGG + chr6_2:72178910-72178929 None:intergenic 50.0%
CCTGACTGCAAAACAGGTTG+AGG + chr6_2:72178918-72178937 None:intergenic 50.0%
! CCTCAACCTGTTTTGCAGTC+AGG - chr6_2:72178915-72178934 Msa0927680:intron 50.0%
TGTGTATCACCTTGGACTCC+TGG + chr6_2:72179077-72179096 None:intergenic 50.0%
TTTACAGCACCACCCACTGA+CGG + chr6_2:72179322-72179341 None:intergenic 50.0%
!! GGGTGGTGCTGTAAATAGTC+AGG - chr6_2:72179327-72179346 Msa0927680:intron 50.0%
! GGTACAGAAGGTGCATGCAA+TGG + chr6_2:72179457-72179476 None:intergenic 50.0%
!! GCATGTGGCATTGGTGCATT+CGG + chr6_2:72179496-72179515 None:intergenic 50.0%
GAGGCATGATGGTATGCATG+TGG + chr6_2:72179511-72179530 None:intergenic 50.0%
!! TAGCAGGCTTTGAGGCATGA+TGG + chr6_2:72179522-72179541 None:intergenic 50.0%
TGCCTCAAAGCCTGCTAATG+AGG - chr6_2:72179525-72179544 Msa0927680:intron 50.0%
AGCCTCATTAGCAGGCTTTG+AGG + chr6_2:72179530-72179549 None:intergenic 50.0%
! GAACTGGAGCAGGAAAGTAC+TGG + chr6_2:72179739-72179758 None:intergenic 50.0%
TTCCTGCTCCAGTTCAAGGT+TGG - chr6_2:72179744-72179763 Msa0927680:intron 50.0%
CCCATTTGCCAACCTTGAAC+TGG + chr6_2:72179755-72179774 None:intergenic 50.0%
GGCTGTGAATAACTTGGCAC+AGG + chr6_2:72180048-72180067 None:intergenic 50.0%
CCTTCCATGTCTTCCTTGCA+CGG - chr6_2:72180373-72180392 Msa0927680:intron 50.0%
!! GGGAGTGATGGTGGTACATT+AGG + chr6_2:72180406-72180425 None:intergenic 50.0%
!! ATGAACTGCTCTGGCTTGGA+GGG + chr6_2:72180435-72180454 None:intergenic 50.0%
!! AATGAACTGCTCTGGCTTGG+AGG + chr6_2:72180436-72180455 None:intergenic 50.0%
TGCAATGAACTGCTCTGGCT+TGG + chr6_2:72180439-72180458 None:intergenic 50.0%
TGAAGACTGCACGGTTCCTA+CGG + chr6_2:72180485-72180504 None:intergenic 50.0%
!! TGCATGTGGTGGATAACCCA+GGG + chr6_2:72180509-72180528 None:intergenic 50.0%
!! ATGCATGTGGTGGATAACCC+AGG + chr6_2:72180510-72180529 None:intergenic 50.0%
TGGGTTATCCACCACATGCA+TGG - chr6_2:72180509-72180528 Msa0927680:intron 50.0%
GAACCTTGAAAGGATGGCAG+GGG + chr6_2:72180541-72180560 None:intergenic 50.0%
GGAACCTTGAAAGGATGGCA+GGG + chr6_2:72180542-72180561 None:intergenic 50.0%
CTGAAGGTGGTACATTAGGC+AGG + chr6_2:72180564-72180583 None:intergenic 50.0%
CTGCCTAATGTACCACCTTC+AGG - chr6_2:72180562-72180581 Msa0927680:intron 50.0%
! ATGGATTGCCTAGGTTCGGA+GGG + chr6_2:72180597-72180616 None:intergenic 50.0%
!! TGGGATGGATTGCCTAGGTT+CGG + chr6_2:72180601-72180620 None:intergenic 50.0%
! GCATATGATGACGATGGGGT+TGG + chr6_2:72180634-72180653 None:intergenic 50.0%
TCATATGCATCAGTCCCACC+AGG - chr6_2:72180646-72180665 Msa0927680:intron 50.0%
TCAATGTGCAGGCAAGGAGT+TGG - chr6_2:72181113-72181132 Msa0927680:intron 50.0%
CAATGTGCAGGCAAGGAGTT+GGG - chr6_2:72181114-72181133 Msa0927680:intron 50.0%
! CTATCAGGCAGCTGCTGATT+TGG + chr6_2:72181179-72181198 None:intergenic 50.0%
CAAATCAGCAGCTGCCTGAT+AGG - chr6_2:72181177-72181196 Msa0927680:intron 50.0%
! CGAATGGATTCCCTCCTTTG+GGG + chr6_2:72181232-72181251 None:intergenic 50.0%
! CCGAATGGATTCCCTCCTTT+GGG + chr6_2:72181233-72181252 None:intergenic 50.0%
CCCAAAGGAGGGAATCCATT+CGG - chr6_2:72181230-72181249 Msa0927680:intron 50.0%
CCAAAGGAGGGAATCCATTC+GGG - chr6_2:72181231-72181250 Msa0927680:intron 50.0%
! GATTTGTGATGACCGGCTCT+GGG - chr6_2:72181376-72181395 Msa0927680:five_prime_UTR 50.0%
! TTTTCACTTCGACCCAGAGC+CGG + chr6_2:72181391-72181410 None:intergenic 50.0%
CATGACACCTGTCAGACACC+AGG + chr6_2:72173648-72173667 None:intergenic 55.0%
TCTTACGAGCGTGCGATTCG+AGG - chr6_2:72173947-72173966 Msa0927680:intron 55.0%
GTGGGCAACTTGGGGCTTAT+CGG - chr6_2:72176005-72176024 Msa0927680:intron 55.0%
GAGAATGGTGCAACAGGTGC+TGG + chr6_2:72176409-72176428 None:intergenic 55.0%
ACCTCTGACAAACCACCGAG+AGG - chr6_2:72177528-72177547 Msa0927680:CDS 55.0%
! TCCTCTCGGTGGTTTGTCAG+AGG + chr6_2:72177532-72177551 None:intergenic 55.0%
CTTACGACCTTTCCTCTCGG+TGG + chr6_2:72177543-72177562 None:intergenic 55.0%
CCCTCCATACGAAGACACAC+AGG - chr6_2:72177780-72177799 Msa0927680:intron 55.0%
AGTCCAGGTGGAAGAAGTCC+TGG - chr6_2:72177826-72177845 Msa0927680:intron 55.0%
TTGACAACTGGAGGACGACC+GGG + chr6_2:72177895-72177914 None:intergenic 55.0%
TCTCTAACAGGTCGGACCAC+GGG + chr6_2:72178015-72178034 None:intergenic 55.0%
GGGGGTCCACTTATCCTAAG+AGG + chr6_2:72178060-72178079 None:intergenic 55.0%
! TCGGCAGCTTTTCCGCTGTT+TGG + chr6_2:72178087-72178106 None:intergenic 55.0%
CATCTCCCCCTTTAGTGAGG+TGG - chr6_2:72178692-72178711 Msa0927680:intron 55.0%
CTCAGCCACCTCACTAAAGG+GGG + chr6_2:72178700-72178719 None:intergenic 55.0%
AACTGCATCCTCTGGCAGCT+TGG - chr6_2:72178773-72178792 Msa0927680:intron 55.0%
ACTGGATACCAAGCTGCCAG+AGG + chr6_2:72178784-72178803 None:intergenic 55.0%
TGGACTCCTGGAGCATGAGA+AGG + chr6_2:72179065-72179084 None:intergenic 55.0%
TCTCATGCTCCAGGAGTCCA+AGG - chr6_2:72179065-72179084 Msa0927680:intron 55.0%
CTAGGAGCTGCTGCTGGAAT+AGG + chr6_2:72179163-72179182 None:intergenic 55.0%
CCAAAACTAGGAGCTGCTGC+TGG + chr6_2:72179169-72179188 None:intergenic 55.0%
! CCAGCAGCAGCTCCTAGTTT+TGG - chr6_2:72179166-72179185 Msa0927680:intron 55.0%
TTCTCAGCTTTCCCACCCAG+TGG - chr6_2:72179193-72179212 Msa0927680:intron 55.0%
! GATGGCACTGAAGTGCCACT+GGG + chr6_2:72179211-72179230 None:intergenic 55.0%
TGGTTGCGGATGCTGCAAAC+TGG + chr6_2:72179266-72179285 None:intergenic 55.0%
! GAAGCAGGGAACGTTGGTTG+CGG + chr6_2:72179280-72179299 None:intergenic 55.0%
CTAGCAGAAGCAGGGAACGT+TGG + chr6_2:72179286-72179305 None:intergenic 55.0%
CAATTTCCACCGTCAGTGGG+TGG - chr6_2:72179310-72179329 Msa0927680:intron 55.0%
CATGCACCTTCTGTACCCAC+AGG - chr6_2:72179460-72179479 Msa0927680:intron 55.0%
ACCTTCTGTACCCACAGGAC+AGG - chr6_2:72179465-72179484 Msa0927680:intron 55.0%
CCTTCTGTACCCACAGGACA+GGG - chr6_2:72179466-72179485 Msa0927680:intron 55.0%
CTTCTGTACCCACAGGACAG+GGG - chr6_2:72179467-72179486 Msa0927680:intron 55.0%
TGCCAACCTTGAACTGGAGC+AGG + chr6_2:72179749-72179768 None:intergenic 55.0%
CCGTGCAAGGAAGACATGGA+AGG + chr6_2:72180376-72180395 None:intergenic 55.0%
ATTAGGCAACGCACCGTGCA+AGG + chr6_2:72180389-72180408 None:intergenic 55.0%
!! TCTGGCTTGGAGGGTGCATT+GGG + chr6_2:72180426-72180445 None:intergenic 55.0%
AATCCACCACTGCCTACCGT+AGG - chr6_2:72180466-72180485 Msa0927680:intron 55.0%
AACCGTGCAGTCTTCAACCC+TGG - chr6_2:72180489-72180508 Msa0927680:intron 55.0%
ACCGTGCAGTCTTCAACCCT+GGG - chr6_2:72180490-72180509 Msa0927680:intron 55.0%
ACCCAGGGTTGAAGACTGCA+CGG + chr6_2:72180494-72180513 None:intergenic 55.0%
GGGAACCTTGAAAGGATGGC+AGG + chr6_2:72180543-72180562 None:intergenic 55.0%
GGCAGGGAACCTTGAAAGGA+TGG + chr6_2:72180547-72180566 None:intergenic 55.0%
ATTACGCACCCTCCGAACCT+AGG - chr6_2:72180586-72180605 Msa0927680:intron 55.0%
!! GATGGATTGCCTAGGTTCGG+AGG + chr6_2:72180598-72180617 None:intergenic 55.0%
!! AGGCATGGGATGGATTGCCT+AGG + chr6_2:72180606-72180625 None:intergenic 55.0%
TAGGCAATCCATCCCATGCC+TGG - chr6_2:72180605-72180624 Msa0927680:intron 55.0%
GTCATACGCTGGGCAGCAAA+TGG - chr6_2:72180761-72180780 Msa0927680:intron 55.0%
TTAGAGCTGGGAGTGGTTCC+CGG + chr6_2:72181203-72181222 None:intergenic 55.0%
TTGGGGAAGGGGTTAGAGCT+GGG + chr6_2:72181215-72181234 None:intergenic 55.0%
TTTGGGGAAGGGGTTAGAGC+TGG + chr6_2:72181216-72181235 None:intergenic 55.0%
! AGCTCTAACCCCTTCCCCAA+AGG - chr6_2:72181215-72181234 Msa0927680:intron 55.0%
TCTAACCCCTTCCCCAAAGG+AGG - chr6_2:72181218-72181237 Msa0927680:intron 55.0%
CTAACCCCTTCCCCAAAGGA+GGG - chr6_2:72181219-72181238 Msa0927680:intron 55.0%
! GATTCCCTCCTTTGGGGAAG+GGG + chr6_2:72181226-72181245 None:intergenic 55.0%
! GGATTCCCTCCTTTGGGGAA+GGG + chr6_2:72181227-72181246 None:intergenic 55.0%
! TGGATTCCCTCCTTTGGGGA+AGG + chr6_2:72181228-72181247 None:intergenic 55.0%
! CCCGAATGGATTCCCTCCTT+TGG + chr6_2:72181234-72181253 None:intergenic 55.0%
! GGATTTGTGATGACCGGCTC+TGG - chr6_2:72181375-72181394 Msa0927680:five_prime_UTR 55.0%
GGTGCATCCTGGTGTCTGAC+AGG - chr6_2:72173638-72173657 Msa0927680:intron 60.0%
GGTGACAGGTCTAGTCCAGG+TGG - chr6_2:72177814-72177833 Msa0927680:intron 60.0%
TCCCGAACGAGCTAGAGACC+TGG - chr6_2:72177975-72177994 Msa0927680:intron 60.0%
! CCCAGGTCTCTAGCTCGTTC+GGG + chr6_2:72177979-72177998 None:intergenic 60.0%
CCCGAACGAGCTAGAGACCT+GGG - chr6_2:72177976-72177995 Msa0927680:intron 60.0%
! GCCCAGGTCTCTAGCTCGTT+CGG + chr6_2:72177980-72177999 None:intergenic 60.0%
TAACAGGTCGGACCACGGGT+GGG + chr6_2:72178011-72178030 None:intergenic 60.0%
GGACCCCCCAAACCAAACAG+CGG - chr6_2:72178072-72178091 Msa0927680:intron 60.0%
! GCACTGAAGTGCCACTGGGT+GGG + chr6_2:72179207-72179226 None:intergenic 60.0%
! GGATGGCACTGAAGTGCCAC+TGG + chr6_2:72179212-72179231 None:intergenic 60.0%
CCCTGTCCTGTGGGTACAGA+AGG + chr6_2:72179469-72179488 None:intergenic 60.0%
TTCGGATGCCCCTGTCCTGT+GGG + chr6_2:72179478-72179497 None:intergenic 60.0%
ATTCGGATGCCCCTGTCCTG+TGG + chr6_2:72179479-72179498 None:intergenic 60.0%
TTGGCAAATGGGTCCTCCGC+AGG - chr6_2:72179763-72179782 Msa0927680:intron 60.0%
TGGCAAATGGGTCCTCCGCA+GGG - chr6_2:72179764-72179783 Msa0927680:intron 60.0%
TGCATTGGAAAGCCCTGCGG+AGG + chr6_2:72179779-72179798 None:intergenic 60.0%
CGCACCGTGCAAGGAAGACA+TGG + chr6_2:72180380-72180399 None:intergenic 60.0%
GGGTGCATTGGGAGTGATGG+TGG + chr6_2:72180415-72180434 None:intergenic 60.0%
! GGAGGGTGCATTGGGAGTGA+TGG + chr6_2:72180418-72180437 None:intergenic 60.0%
!! CTCTGGCTTGGAGGGTGCAT+TGG + chr6_2:72180427-72180446 None:intergenic 60.0%
GTTCCTACGGTAGGCAGTGG+TGG + chr6_2:72180472-72180491 None:intergenic 60.0%
ACGGTTCCTACGGTAGGCAG+TGG + chr6_2:72180475-72180494 None:intergenic 60.0%
GACTGCACGGTTCCTACGGT+AGG + chr6_2:72180481-72180500 None:intergenic 60.0%
GGTGGAGTCCATGCATGTGG+TGG + chr6_2:72180520-72180539 None:intergenic 60.0%
AGGGGTGGAGTCCATGCATG+TGG + chr6_2:72180523-72180542 None:intergenic 60.0%
CCTTGAAAGGATGGCAGGGG+TGG + chr6_2:72180538-72180557 None:intergenic 60.0%
CCACCCCTGCCATCCTTTCA+AGG - chr6_2:72180535-72180554 Msa0927680:intron 60.0%
GGGTGCGTAATGCCTGAAGG+TGG + chr6_2:72180577-72180596 None:intergenic 60.0%
! GGAGGGTGCGTAATGCCTGA+AGG + chr6_2:72180580-72180599 None:intergenic 60.0%
GTTGGAGTCCAGGCATGGGA+TGG + chr6_2:72180616-72180635 None:intergenic 60.0%
TGGGGTTGGAGTCCAGGCAT+GGG + chr6_2:72180620-72180639 None:intergenic 60.0%
ATGGGGTTGGAGTCCAGGCA+TGG + chr6_2:72180621-72180640 None:intergenic 60.0%
TGACGATGGGGTTGGAGTCC+AGG + chr6_2:72180626-72180645 None:intergenic 60.0%
TCAGCAGCTGCCTGATAGGC+CGG - chr6_2:72181181-72181200 Msa0927680:intron 60.0%
GAAGGGGTTAGAGCTGGGAG+TGG + chr6_2:72181210-72181229 None:intergenic 60.0%
CTAACAGGTCGGACCACGGG+TGG + chr6_2:72178012-72178031 None:intergenic 65.0%
! GGCACTGAAGTGCCACTGGG+TGG + chr6_2:72179208-72179227 None:intergenic 65.0%
ACAGCACCACCCACTGACGG+TGG + chr6_2:72179319-72179338 None:intergenic 65.0%
CAGCAGCTGCCTGATAGGCC+GGG - chr6_2:72181182-72181201 Msa0927680:intron 65.0%
GGAGTGGTTCCCGGCCTATC+AGG + chr6_2:72181194-72181213 None:intergenic 65.0%
! CGGGTGGGCTTGAAGAGCCC+AGG + chr6_2:72177996-72178015 None:intergenic 70.0%
GGGCTCTTCAAGCCCACCCG+TGG - chr6_2:72177996-72178015 Msa0927680:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 72172942 72181762 72172942 ID=Msa0927680;Name=Msa0927680
chr6_2 mRNA 72172942 72181762 72172942 ID=Msa0927680-mRNA-1;Parent=Msa0927680;Name=Msa0927680-mRNA-1;_AED=0.05;_eAED=0.05;_QI=267|0.92|0.93|1|0.85|0.8|15|506|715
chr6_2 exon 72172942 72173580 72172942 ID=Msa0927680-mRNA-1:exon:12202;Parent=Msa0927680-mRNA-1
chr6_2 exon 72173899 72173944 72173899 ID=Msa0927680-mRNA-1:exon:12201;Parent=Msa0927680-mRNA-1
chr6_2 exon 72174037 72174334 72174037 ID=Msa0927680-mRNA-1:exon:12200;Parent=Msa0927680-mRNA-1
chr6_2 exon 72174576 72174659 72174576 ID=Msa0927680-mRNA-1:exon:12199;Parent=Msa0927680-mRNA-1
chr6_2 exon 72174890 72174988 72174890 ID=Msa0927680-mRNA-1:exon:12198;Parent=Msa0927680-mRNA-1
chr6_2 exon 72175086 72175250 72175086 ID=Msa0927680-mRNA-1:exon:12197;Parent=Msa0927680-mRNA-1
chr6_2 exon 72175356 72175546 72175356 ID=Msa0927680-mRNA-1:exon:12196;Parent=Msa0927680-mRNA-1
chr6_2 exon 72175618 72175933 72175618 ID=Msa0927680-mRNA-1:exon:12195;Parent=Msa0927680-mRNA-1
chr6_2 exon 72176579 72176986 72176579 ID=Msa0927680-mRNA-1:exon:12194;Parent=Msa0927680-mRNA-1
chr6_2 exon 72177147 72177243 72177147 ID=Msa0927680-mRNA-1:exon:12193;Parent=Msa0927680-mRNA-1
chr6_2 exon 72177324 72177385 72177324 ID=Msa0927680-mRNA-1:exon:12192;Parent=Msa0927680-mRNA-1
chr6_2 exon 72177488 72177575 72177488 ID=Msa0927680-mRNA-1:exon:12191;Parent=Msa0927680-mRNA-1
chr6_2 exon 72178079 72178140 72178079 ID=Msa0927680-mRNA-1:exon:12190;Parent=Msa0927680-mRNA-1
chr6_2 exon 72181245 72181447 72181245 ID=Msa0927680-mRNA-1:exon:12189;Parent=Msa0927680-mRNA-1
chr6_2 exon 72181600 72181762 72181600 ID=Msa0927680-mRNA-1:exon:12188;Parent=Msa0927680-mRNA-1
chr6_2 five_prime_UTR 72181600 72181762 72181600 ID=Msa0927680-mRNA-1:five_prime_utr;Parent=Msa0927680-mRNA-1
chr6_2 five_prime_UTR 72181344 72181447 72181344 ID=Msa0927680-mRNA-1:five_prime_utr;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72181245 72181343 72181245 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72178079 72178140 72178079 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72177488 72177575 72177488 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72177324 72177385 72177324 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72177147 72177243 72177147 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72176579 72176986 72176579 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72175618 72175933 72175618 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72175356 72175546 72175356 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72175086 72175250 72175086 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72174890 72174988 72174890 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72174576 72174659 72174576 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72174037 72174334 72174037 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72173899 72173944 72173899 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 CDS 72173448 72173580 72173448 ID=Msa0927680-mRNA-1:cds;Parent=Msa0927680-mRNA-1
chr6_2 three_prime_UTR 72172942 72173447 72172942 ID=Msa0927680-mRNA-1:three_prime_utr;Parent=Msa0927680-mRNA-1
Gene Sequence

>Msa0927680

ATGGGGACTCGGTTTAAAGAAGATGAGAGAAACGAACGCGCGATTCGAACTCTTTTAAAGCTTGAACCAAATCGGAGATGTATTAACTGTAATAGTTTGGGACCACAATATGTGTGCACAAATTTCTGGACTTTTGTTTGCACTAATTGTAGTGGAATACACCGTGAATTTACACATCGTGTGAAATCAGTTTCAATGGCTAAATTTGCTTCGCAAGAAGTTACCGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAGATTTATTTTAAAGAATGGGATGCACAACGCAATTCTTTCCCTGACAGCAGTAATGTTAACAGGCTCCGAGAGTTTGTTAAGCATGTTTATGAGGATAGGAGATTCACTGGAGATAGGACCTCTGACAAACCACCGAGAGGAAAGGTCGGTGACAAAGACGATTCCTATGAAAACAGGAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCTCCATACGAAGACACACAGGAACGTCGTTATGGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGCGATTATAAGAGAAGTCCCGGTCGTCCTCCAGTTGTCAATGATTGGCGTCGTGAAGACCGTAGAGTATCAGATGGAGATTATAAGGTGGAAAGTCAATCTCCCGAACGAGCTAGAGACCTGGGCTCTTCAAGCCCACCCGTGGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTAATACCTCTTAGGATAAGTGGACCCCCCAAACCAAACAGCGGAAAAGCTGCCGATGCTTCATCACTGACACAGAGAACTGCATCCTCTGGCAGCTTGGTATCCAGTAACGAAAGCCAAGTAGAGATTAAATTTGAGACTACTAAGAGCCTTATTGATTTTGATGCCGATCCTGAACCTGTTGCTCCAACAGTTCCTCAAGCCCAACAATCCAGTGTGCCTCAACCTGTTTTGCAGTCAGGAAATCCCAGTGATGACAATTGGGCTTCTTTTGATGTTGCTTCTGAGGCAAAAGCAAATCCAAGCACCTCAAATTTAAATCCGCTTGAATCTGTTTTGTCCCAATTGTCCGTGTCGGAATCTTTACCTTCTCATGCTCCAGGAGTCCAAGGACCTATTCCAGCAGCAGCTCCTAGTTTTGGCAATTTCTCAGCTTTCCCACCCAGTGGCACTTCAGTGCCATCCGTATCACCTCATAATAATGTAGGACAATGGGCCAGTTTGCAGCATCCGCAACCAACGTTCCCTGCTTCTGCTAGTCAACAATTTCCACCGTCAGTGGGTGGTGCTGTAAATAGTCAGCCATTGCATGCACCTTCTGTACCCACAGGACAGGGGCATCCGAATGCACCAATGCCACATGCATACCATCATGCCTCAAAGCCTGCTAATGAGGCTTTTAACAGTGTTGTTTCTCAACCTTCTGCTGTAGAAGTTAAACCAAGTGGAAGAACAGAACTTCCTGAAGATCTGTTCACTGTAAAACACCAGTACTTTCCTGCTCCAGTTCAAGGTTGGCAAATGGGTCCTCCGCAGGGCTTTCCAATGCAATATAATAATGTGGCGCCTGTGCCAAGTTATTCACAGCCGTCAAGGTCAACAAATCCATTCGATGTCAGCAGTAAACAAACCCCAAATCAAGCCCCAAGTTTTCCTTCCATGTCTTCCTTGCACGGTGCGTTGCCTAATGTACCACCATCACTCCCAATGCACCCTCCAAGCCAGAGCAGTTCATTGCATGCATGGAATCCACCACTGCCTACCGTAGGAACCGTGCAGTCTTCAACCCTGGGTTATCCACCACATGCATGGACTCCACCCCTGCCATCCTTTCAAGGTTCCCTGCCTAATGTACCACCTTCAGGCATTACGCACCCTCCGAACCTAGGCAATCCATCCCATGCCTGGACTCCAACCCCATCGTCATCATATGCATCAGTCCCACCAGGGTCATACGCTGGGCAGCAAATGGCAACTAATATACCAATGCCAAGGCAAGGAGTTGGGAATTTCGGAACTGAGGGAAACATGTTCGGCTTGTCAAATCCAAATCAGCAGCTGCCTGATAGGCCGGGAACCACTCCCAGCTCTAACCCCTTCCCCAAAGGAGGGAATCCATTCGGGTAA
Protein sequence

>Msa0927680

MGTRFKEDERNERAIRTLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFASQEVTALQEGGNQRAKEIYFKEWDAQRNSFPDSSNVNRLREFVKHVYEDRRFTGDRTSDKPPRGKVGDKDDSYENRRVEAYQGGSKSPPYEDTQERRYGDRSSPGGRSPGYDQESRQYGDYKRSPGRPPVVNDWRREDRRVSDGDYKVESQSPERARDLGSSSPPVVRPVRDILGENVIPLRISGPPKPNSGKAADASSLTQRTASSGSLVSSNESQVEIKFETTKSLIDFDADPEPVAPTVPQAQQSSVPQPVLQSGNPSDDNWASFDVASEAKANPSTSNLNPLESVLSQLSVSESLPSHAPGVQGPIPAAAPSFGNFSAFPPSGTSVPSVSPHNNVGQWASLQHPQPTFPASASQQFPPSVGGAVNSQPLHAPSVPTGQGHPNAPMPHAYHHASKPANEAFNSVVSQPSAVEVKPSGRTELPEDLFTVKHQYFPAPVQGWQMGPPQGFPMQYNNVAPVPSYSQPSRSTNPFDVSSKQTPNQAPSFPSMSSLHGALPNVPPSLPMHPPSQSSSLHAWNPPLPTVGTVQSSTLGYPPHAWTPPLPSFQGSLPNVPPSGITHPPNLGNPSHAWTPTPSSSYASVPPGSYAGQQMATNIPMPRQGVGNFGTEGNMFGLSNPNQQLPDRPGTTPSSNPFPKGGNPFG*