AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0960150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0960150 MtrunA17_Chr6g0485101 91.469 715 44 3 1 715 1 698 0.0 1313
Msa0960150 MtrunA17_Chr8g0390701 56.818 748 230 17 1 715 1 688 0.0 743
Msa0960150 MtrunA17_Chr6g0460621 50.000 238 102 5 16 239 15 249 3.21e-65 229
Msa0960150 MtrunA17_Chr1g0148531 29.226 349 140 8 66 344 1 312 8.85e-29 120
Msa0960150 MtrunA17_Chr8g0360731 28.000 150 89 4 10 147 14 156 5.22e-17 84.3
Msa0960150 MtrunA17_Chr2g0318391 26.994 163 109 3 8 167 12 167 2.45e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0960150 AT4G13350.1 48.027 583 221 11 1 569 1 515 1.29e-153 459
Msa0960150 AT4G13350.2 48.027 583 221 11 1 569 1 515 1.29e-153 459
Msa0960150 AT4G32630.2 32.483 745 350 29 5 714 1 627 7.85e-82 273
Msa0960150 AT4G32630.6 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0960150 AT4G32630.4 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0960150 AT4G32630.5 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0960150 AT4G32630.3 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0960150 AT4G32630.1 32.392 744 351 29 5 714 1 626 1.99e-81 271
Msa0960150 AT1G08680.3 59.412 170 67 2 1 169 2 170 1.91e-64 225
Msa0960150 AT1G08680.5 59.412 170 67 2 1 169 2 170 2.32e-64 224
Msa0960150 AT1G08680.2 44.771 306 148 9 1 298 2 294 2.89e-64 226
Msa0960150 AT1G08680.4 44.771 306 148 9 1 298 2 294 2.90e-64 226
Msa0960150 AT1G08680.1 44.771 306 148 9 1 298 2 294 2.94e-64 226
Msa0960150 AT5G54310.1 28.221 163 102 7 10 167 14 166 3.74e-13 72.8
Msa0960150 AT4G21160.2 31.452 124 63 5 12 122 15 129 2.73e-11 66.2
Msa0960150 AT4G21160.3 31.452 124 63 5 12 122 15 129 2.73e-11 66.2
Msa0960150 AT4G21160.1 31.452 124 63 5 12 122 15 129 2.73e-11 66.2
Msa0960150 AT4G21160.4 31.452 124 63 5 12 122 15 129 2.73e-11 66.2

Find 297 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACCTGTTAGAGATATTT+TGG 0.113010 6_3:+79185364 Msa0960150:CDS
CTCTACTTGGCTTTCGTTAC+TGG 0.146357 6_3:-79186143 None:intergenic
CATACACTTGGGGCTTGATT+TGG 0.188678 6_3:-79187455 None:intergenic
ATACACTTGGGGCTTGATTT+GGG 0.205821 6_3:-79187454 None:intergenic
CAGGAGAGTTGAGGCATATC+AGG 0.233416 6_3:+79185088 Msa0960150:CDS
TTCTGAGTCGTGCTCTTTCA+TGG 0.256163 6_3:+79188971 Msa0960150:three_prime_UTR
AATATGTGTGCACAAATTTC+TGG 0.257954 6_3:+79183915 Msa0960150:CDS
GGAGTGGTTCCCGGCCTATC+AGG 0.277885 6_3:-79188535 None:intergenic
CCAGCAGCAGCTCCTAGTTT+TGG 0.290873 6_3:+79186510 Msa0960150:CDS
CTCTGGCTTGGAGGGTGCAT+TGG 0.292668 6_3:-79187768 None:intergenic
TACTTTCCTGCTCCAGTTCA+AGG 0.301141 6_3:+79187084 Msa0960150:CDS
CCACCCCTGCCATCCTTTCA+AGG 0.302420 6_3:+79187879 Msa0960150:CDS
CCGAATGGATTCCCTCCTTT+GGG 0.307754 6_3:-79188574 None:intergenic
TTAGAGCTGGGAGTGGTTCC+CGG 0.312806 6_3:-79188544 None:intergenic
GGTTAGAAATGTTGAAGTTC+TGG 0.319675 6_3:-79180401 None:intergenic
CTATCAGGCAGCTGCTGATT+TGG 0.325530 6_3:-79188520 None:intergenic
TTGAAGTTCTGGAAGGTTCT+TGG 0.333531 6_3:-79180390 None:intergenic
GAGAAAATGTAATACCTCTT+AGG 0.336552 6_3:+79185387 Msa0960150:CDS
CCCGAATGGATTCCCTCCTT+TGG 0.337927 6_3:-79188575 None:intergenic
AGGCAAGGAGTTGGGAATTT+CGG 0.339840 6_3:+79188466 Msa0960150:intron
GGGTTTATATATGATGATTA+TGG 0.348003 6_3:-79180369 None:intergenic
AGTATCAGATGGAGATTATA+AGG 0.353912 6_3:+79185283 Msa0960150:CDS
TCTCCCAAAATATCTCTAAC+AGG 0.355400 6_3:-79185368 None:intergenic
TTGGTGCCAGTAATGTTAAC+AGG 0.360040 6_3:+79184795 Msa0960150:intron
ACTGTTGGAGCAACAGGTTC+AGG 0.363404 6_3:-79186211 None:intergenic
GGATTTGTGATGACCGGCTC+TGG 0.363823 6_3:+79188719 Msa0960150:three_prime_UTR
TTGAGGCACACTGGATTGTT+GGG 0.368269 6_3:-79186242 None:intergenic
GCCCAGGTCTCTAGCTCGTT+CGG 0.369926 6_3:-79185321 None:intergenic
TTTGGGGAAGGGGTTAGAGC+TGG 0.369937 6_3:-79188557 None:intergenic
TGAGGAACTGTTGGAGCAAC+AGG 0.372048 6_3:-79186217 None:intergenic
CTGCCTAATGTACCACCTTC+AGG 0.373574 6_3:+79187906 Msa0960150:CDS
GGATTTCCTGACTGCAAAAC+AGG 0.377480 6_3:-79186265 None:intergenic
TGAAGTTCTGGAAGGTTCTT+GGG 0.383875 6_3:-79180389 None:intergenic
GAAATCCCAGTGATGACAAT+TGG 0.385158 6_3:+79186281 Msa0960150:CDS
CAGTTAATACATCTCCGATT+TGG 0.387443 6_3:-79180771 None:intergenic
CTAGGAGCTGCTGCTGGAAT+AGG 0.389666 6_3:-79186504 None:intergenic
TCTGGCTTGGAGGGTGCATT+GGG 0.389848 6_3:-79187767 None:intergenic
GGGAGTGATGGTGGTACATT+AGG 0.391076 6_3:-79187747 None:intergenic
CAAATCAGCAGCTGCCTGAT+AGG 0.391546 6_3:+79188521 Msa0960150:CDS
AAGATTCCGACACGGACAAT+TGG 0.392823 6_3:-79186381 None:intergenic
CCCATTTGCCAACCTTGAAC+TGG 0.394548 6_3:-79187096 None:intergenic
GATCAAGAAAGTAGGCAATA+TGG 0.399904 6_3:+79185197 Msa0960150:CDS
GTTTGTTAAGCATGTTTATG+AGG 0.401277 6_3:+79184826 Msa0960150:CDS
ATGTATTAACTGTAATAGTT+TGG 0.402848 6_3:+79180782 Msa0960150:CDS
CATTGTCCTACATTATTATG+AGG 0.408827 6_3:-79186582 None:intergenic
AACCGTGCAGTCTTCAACCC+TGG 0.409273 6_3:+79187833 Msa0960150:CDS
ACAATATACTATCTTGGATA+AGG 0.410533 6_3:+79188798 Msa0960150:three_prime_UTR
CCTTCCATGTCTTCCTTGCA+CGG 0.412348 6_3:+79187717 Msa0960150:CDS
AGATAGAGAGATTGAATGAA+GGG 0.413186 6_3:+79188844 Msa0960150:three_prime_UTR
GATCGGCATCAAAATCAATA+AGG 0.413195 6_3:-79186189 None:intergenic
TGTAAACTGTTTATTCCTAT+AGG 0.414631 6_3:+79188767 Msa0960150:three_prime_UTR
GTTGAGGCACACTGGATTGT+TGG 0.415038 6_3:-79186243 None:intergenic
CCCAGGTCTCTAGCTCGTTC+GGG 0.418011 6_3:-79185320 None:intergenic
ATGATGATTGAAATTGCGTT+TGG 0.419385 6_3:+79180640 Msa0960150:five_prime_UTR
CCAAAGGAGGGAATCCATTC+GGG 0.420807 6_3:+79188575 Msa0960150:CDS
GTACAAACACATGTAAGTTT+CGG 0.424020 6_3:+79188655 Msa0960150:three_prime_UTR
TGTGTATCACCTTGGACTCC+TGG 0.424442 6_3:-79186418 None:intergenic
CCAGTTCAAGGTTGGCAAAT+GGG 0.424788 6_3:+79187096 Msa0960150:CDS
GGATTCCCTCCTTTGGGGAA+GGG 0.425243 6_3:-79188568 None:intergenic
GACACACAGGAACGTCGTTA+TGG 0.426530 6_3:+79185137 Msa0960150:CDS
GTCCTCCAGTTGTCAATGAT+TGG 0.426864 6_3:+79185243 Msa0960150:CDS
GCAAGTACTTACCTGCTGTC+AGG 0.428298 6_3:-79184714 None:intergenic
ATGCCTGAAGGTGGTACATT+AGG 0.431901 6_3:-79187909 None:intergenic
CAATATACTATCTTGGATAA+GGG 0.431965 6_3:+79188799 Msa0960150:three_prime_UTR
CCCAAAGGAGGGAATCCATT+CGG 0.433525 6_3:+79188574 Msa0960150:CDS
TTGGCAAATGGGTCCTCCGC+AGG 0.434161 6_3:+79187107 Msa0960150:CDS
CTGTTAAAAGCCTCATTAGC+AGG 0.435777 6_3:-79186879 None:intergenic
TTGGGGAAGGGGTTAGAGCT+GGG 0.436834 6_3:-79188556 None:intergenic
CTACTTTCTTGATCATATCC+AGG 0.438353 6_3:-79185188 None:intergenic
GATTCCCTCCTTTGGGGAAG+GGG 0.439278 6_3:-79188567 None:intergenic
TAGATAGAGAGATTGAATGA+AGG 0.439631 6_3:+79188843 Msa0960150:three_prime_UTR
GGAACTGAGGGAAACATGTT+CGG 0.441681 6_3:+79188487 Msa0960150:CDS
GTTTCGGTTTCTATTGTTTG+TGG 0.443066 6_3:+79188671 Msa0960150:three_prime_UTR
AAGACGATTCCTATGAAAAC+AGG 0.449938 6_3:+79185069 Msa0960150:CDS
AGAAGCCCAATTGTCATCAC+TGG 0.452119 6_3:-79186287 None:intergenic
GGAGGGTGCATTGGGAGTGA+TGG 0.452418 6_3:-79187759 None:intergenic
GCATGTGGCATTGGTGCATT+CGG 0.453125 6_3:-79186837 None:intergenic
GTAATACCTCTTAGGATAAG+TGG 0.454550 6_3:+79185395 Msa0960150:CDS
GGAAGTTCTGTTCTTCCACT+TGG 0.456507 6_3:-79186936 None:intergenic
TGACGATGGGGTTGGAGTCC+AGG 0.457193 6_3:-79187967 None:intergenic
TGCAATGAACTGCTCTGGCT+TGG 0.457749 6_3:-79187780 None:intergenic
TGTTGGGCTTGAGGAACTGT+TGG 0.457958 6_3:-79186226 None:intergenic
TATGAGGATAGGAGATTCAC+TGG 0.458069 6_3:+79184842 Msa0960150:CDS
TCCAGTTCAAGGTTGGCAAA+TGG 0.459544 6_3:+79187095 Msa0960150:CDS
AATGAACTGCTCTGGCTTGG+AGG 0.462667 6_3:-79187777 None:intergenic
ATAGGAGATTCACTGGAGAT+AGG 0.463488 6_3:+79184849 Msa0960150:CDS
TACACTTGGGGCTTGATTTG+GGG 0.463639 6_3:-79187453 None:intergenic
TGCCAACCTTGAACTGGAGC+AGG 0.464842 6_3:-79187090 None:intergenic
GGATTTAAATTTGAGGTGCT+TGG 0.465186 6_3:-79186340 None:intergenic
TGGATTCCCTCCTTTGGGGA+AGG 0.465352 6_3:-79188569 None:intergenic
TCATAATAATGTAGGACAAT+GGG 0.466865 6_3:+79186584 Msa0960150:CDS
CAATGTGCAGGCAAGGAGTT+GGG 0.467253 6_3:+79188458 Msa0960150:intron
GTTGGAGTCCAGGCATGGGA+TGG 0.467652 6_3:-79187957 None:intergenic
CGACGCCAATCATTGACAAC+TGG 0.467673 6_3:-79185248 None:intergenic
AAGAAAGAAAGAGAGAGAAA+CGG 0.467763 6_3:-79180319 None:intergenic
TAGGCAATCCATCCCATGCC+TGG 0.469752 6_3:+79187949 Msa0960150:CDS
ATTATGGTGAAGAGTGAAAA+CGG 0.469794 6_3:-79180353 None:intergenic
TCAGCAGCTGCCTGATAGGC+CGG 0.471517 6_3:+79188525 Msa0960150:CDS
AGATTCCGACACGGACAATT+GGG 0.472985 6_3:-79186380 None:intergenic
AAGAAGTTGTTGTTAGAGAT+GGG 0.474534 6_3:+79180687 Msa0960150:exon
GGGGAGACAATATACTATCT+TGG 0.475390 6_3:+79188792 Msa0960150:three_prime_UTR
TCTCAAATTTAATCTCTACT+TGG 0.475894 6_3:-79186156 None:intergenic
CGGTTTCTATTGTTTGTGGA+TGG 0.479058 6_3:+79188675 Msa0960150:three_prime_UTR
ACTTCAAGAAGGAGGAAATC+AGG 0.479603 6_3:+79184539 Msa0960150:CDS
TTCAAGCGGATTTAAATTTG+AGG 0.480362 6_3:-79186347 None:intergenic
TGATGGTATGCATGTGGCAT+TGG 0.480583 6_3:-79186846 None:intergenic
GCCACATTATTATATTGCAT+TGG 0.481046 6_3:-79187135 None:intergenic
GAAGGGGTTAGAGCTGGGAG+TGG 0.481281 6_3:-79188551 None:intergenic
TCTTGGATAAGGGGAGTTTG+AGG 0.483587 6_3:+79188809 Msa0960150:three_prime_UTR
ATGAACTGCTCTGGCTTGGA+GGG 0.485297 6_3:-79187776 None:intergenic
AATGGATTTGTTGACCTTGA+CGG 0.485427 6_3:-79187410 None:intergenic
ACCTTCTGTACCCACAGGAC+AGG 0.486237 6_3:+79186809 Msa0960150:CDS
ATGCATGCAATGAACTGCTC+TGG 0.489391 6_3:-79187785 None:intergenic
AACTGCATCCTCTGGCAGCT+TGG 0.489875 6_3:+79186117 Msa0960150:CDS
CTGAAGGTGGTACATTAGGC+AGG 0.490324 6_3:-79187905 None:intergenic
ATTGACAACTGGAGGACGAC+CGG 0.490377 6_3:-79185237 None:intergenic
TCTTTACCTTCTCATGCTCC+AGG 0.491077 6_3:+79186400 Msa0960150:CDS
TACATTATTATGAGGTGATA+CGG 0.491099 6_3:-79186574 None:intergenic
GGGTGGTGCTGTAAATAGTC+AGG 0.491868 6_3:+79186671 Msa0960150:CDS
TGCCTCAAAGCCTGCTAATG+AGG 0.492851 6_3:+79186869 Msa0960150:CDS
TCACACGATGTGTAAATTCA+CGG 0.492952 6_3:-79184473 None:intergenic
GTCATACGCTGGGCAGCAAA+TGG 0.493340 6_3:+79188105 Msa0960150:CDS
AAATCCCAGTGATGACAATT+GGG 0.494998 6_3:+79186282 Msa0960150:CDS
AGAGAAATTTACCTTGGCAT+TGG 0.497729 6_3:-79188139 None:intergenic
AACTGTTTATTCCTATAGGA+GGG 0.499191 6_3:+79188771 Msa0960150:three_prime_UTR
AGCCTCATTAGCAGGCTTTG+AGG 0.499841 6_3:-79186871 None:intergenic
TCCTGTGTGTCTTCGTATGG+AGG 0.503139 6_3:-79185125 None:intergenic
TTAAGCATGTTTATGAGGAT+AGG 0.505517 6_3:+79184831 Msa0960150:CDS
AATCTACTGTTACAAATACA+TGG 0.505680 6_3:-79188917 None:intergenic
AATTGTTGACTAGCAGAAGC+AGG 0.505821 6_3:-79186636 None:intergenic
CCTTGAAAGGATGGCAGGGG+TGG 0.506197 6_3:-79187879 None:intergenic
TCGTGTGAAATCAGTTTCAA+TGG 0.506647 6_3:+79184488 Msa0960150:CDS
CCAAAACTAGGAGCTGCTGC+TGG 0.507856 6_3:-79186510 None:intergenic
TGGTTGCGGATGCTGCAAAC+TGG 0.508220 6_3:-79186607 None:intergenic
TGGGATGGATTGCCTAGGTT+CGG 0.509902 6_3:-79187942 None:intergenic
AGTCCAGGTGGAAGAAGTCC+TGG 0.510458 6_3:+79185170 Msa0960150:CDS
CAAGTACTTACCTGCTGTCA+GGG 0.511056 6_3:-79184713 None:intergenic
AAATTTGTGCACACATATTG+TGG 0.512763 6_3:-79183911 None:intergenic
TACTTTCAGGGTCATACGCT+GGG 0.514743 6_3:+79188095 Msa0960150:intron
TCAATGTGCAGGCAAGGAGT+TGG 0.515383 6_3:+79188457 Msa0960150:intron
ATGGGGTTGGAGTCCAGGCA+TGG 0.516624 6_3:-79187962 None:intergenic
TTTGTTTGCACTAATTGTAG+TGG 0.518672 6_3:+79183941 Msa0960150:CDS
AAACTGTTTATTCCTATAGG+AGG 0.519443 6_3:+79188770 Msa0960150:three_prime_UTR
CGTTCCTGTGTGTCTTCGTA+TGG 0.519529 6_3:-79185128 None:intergenic
GATGGATTGCCTAGGTTCGG+AGG 0.521926 6_3:-79187939 None:intergenic
AGAAGATGAAGAAGAAGAAA+CGG 0.522489 6_3:-79180422 None:intergenic
TGGGGTTGGAGTCCAGGCAT+GGG 0.524458 6_3:-79187961 None:intergenic
GGGAACCTTGAAAGGATGGC+AGG 0.524803 6_3:-79187884 None:intergenic
CGCACCGTGCAAGGAAGACA+TGG 0.526086 6_3:-79187721 None:intergenic
TAATAAGAAACAACGACTGA+AGG 0.528841 6_3:-79188879 None:intergenic
TCCTCTCGGTGGTTTGTCAG+AGG 0.529596 6_3:-79184873 None:intergenic
GAAGAAGTTGTTGTTAGAGA+TGG 0.529920 6_3:+79180686 Msa0960150:exon
TGTTTACTGCTGACATCGAA+TGG 0.529956 6_3:-79187428 None:intergenic
TTTCAGAGAACTGCATCCTC+TGG 0.530588 6_3:+79186109 Msa0960150:intron
GGGTGCATTGGGAGTGATGG+TGG 0.532284 6_3:-79187756 None:intergenic
ACACTGGATTGTTGGGCTTG+AGG 0.532649 6_3:-79186235 None:intergenic
GGTTTAACTTCTACAGCAGA+AGG 0.534195 6_3:-79186915 None:intergenic
TAGCAGGCTTTGAGGCATGA+TGG 0.534756 6_3:-79186863 None:intergenic
AGGGGTGGAGTCCATGCATG+TGG 0.538337 6_3:-79187864 None:intergenic
CCTTCTGTACCCACAGGACA+GGG 0.538600 6_3:+79186810 Msa0960150:CDS
TTCCTGCTCCAGTTCAAGGT+TGG 0.540598 6_3:+79187088 Msa0960150:CDS
GGCGATTATAAGAGAAGTCC+CGG 0.541192 6_3:+79185218 Msa0960150:CDS
GGATGGCACTGAAGTGCCAC+TGG 0.541437 6_3:-79186553 None:intergenic
ATTAGGCAGGGAACCTTGAA+AGG 0.541766 6_3:-79187892 None:intergenic
TGTTGTTAGAGATGGGGACT+CGG 0.542007 6_3:+79180694 Msa0960150:exon
CAGCAGCTGCCTGATAGGCC+GGG 0.542449 6_3:+79188526 Msa0960150:CDS
AGGAACGTCGTTATGGTGAC+AGG 0.542766 6_3:+79185144 Msa0960150:CDS
CTGTTTATTCCTATAGGAGG+GGG 0.543235 6_3:+79188773 Msa0960150:three_prime_UTR
GAAGCAGGGAACGTTGGTTG+CGG 0.544995 6_3:-79186621 None:intergenic
GTTGGGAATTTCGGAACTGA+GGG 0.545099 6_3:+79188475 Msa0960150:CDS
CGGGTGGGCTTGAAGAGCCC+AGG 0.546386 6_3:-79185337 None:intergenic
GGCAGGGAACCTTGAAAGGA+TGG 0.546497 6_3:-79187888 None:intergenic
TAACAGTAGATTGAGAGTAA+TGG 0.546744 6_3:+79188928 Msa0960150:three_prime_UTR
CCTGACTGCAAAACAGGTTG+AGG 0.547283 6_3:-79186259 None:intergenic
AATTCTTTACATTACCCGAA+TGG 0.547762 6_3:-79188589 None:intergenic
GATAGAGAGATTGAATGAAG+GGG 0.547981 6_3:+79188845 Msa0960150:three_prime_UTR
CTTGACGGCTGTGAATAACT+TGG 0.548241 6_3:-79187395 None:intergenic
ACCGTGCAGTCTTCAACCCT+GGG 0.549066 6_3:+79187834 Msa0960150:CDS
AATGAAGGATTTGTGATGAC+CGG 0.549674 6_3:+79188713 Msa0960150:three_prime_UTR
AGAGCAGTTCATTGCATGCA+TGG 0.549789 6_3:+79187787 Msa0960150:CDS
TCTCATGCTCCAGGAGTCCA+AGG 0.550042 6_3:+79186409 Msa0960150:CDS
GCAATTCTTTCCCTGACAGC+AGG 0.550264 6_3:+79184703 Msa0960150:CDS
TGAAGACTGCACGGTTCCTA+CGG 0.553012 6_3:-79187826 None:intergenic
CTGGATATGATCAAGAAAGT+AGG 0.553339 6_3:+79185189 Msa0960150:CDS
CCTGTGTGTCTTCGTATGGA+GGG 0.554844 6_3:-79185124 None:intergenic
TTTGTCCCAATTGTCCGTGT+CGG 0.555220 6_3:+79186375 Msa0960150:CDS
GTATCACCTCATAATAATGT+AGG 0.555607 6_3:+79186576 Msa0960150:CDS
ATTCGGATGCCCCTGTCCTG+TGG 0.557545 6_3:-79186820 None:intergenic
ATTAGGCAACGCACCGTGCA+AGG 0.558361 6_3:-79187730 None:intergenic
TGGGTTATCCACCACATGCA+TGG 0.559865 6_3:+79187853 Msa0960150:CDS
CTCATAATAATGTAGGACAA+TGG 0.560712 6_3:+79186583 Msa0960150:CDS
AACTTACATGTGTTTGTACA+CGG 0.562698 6_3:-79188651 None:intergenic
TTCGGATGCCCCTGTCCTGT+GGG 0.563942 6_3:-79186819 None:intergenic
TCTCTAACAGGTCGGACCAC+GGG 0.565901 6_3:-79185356 None:intergenic
GTTCCTACGGTAGGCAGTGG+TGG 0.566137 6_3:-79187813 None:intergenic
CAAAACAGGTTGAGGCACAC+TGG 0.567944 6_3:-79186251 None:intergenic
ATAGAGAGATTGAATGAAGG+GGG 0.568072 6_3:+79188846 Msa0960150:three_prime_UTR
ATGCATGTGGTGGATAACCC+AGG 0.569423 6_3:-79187851 None:intergenic
TTGACAACTGGAGGACGACC+GGG 0.570980 6_3:-79185236 None:intergenic
ATGGATTGCCTAGGTTCGGA+GGG 0.571131 6_3:-79187938 None:intergenic
AAACATGCTTAACAAACTCT+CGG 0.571606 6_3:-79184820 None:intergenic
TCTAACCCCTTCCCCAAAGG+AGG 0.572129 6_3:+79188562 Msa0960150:CDS
ATACTTTCAGGGTCATACGC+TGG 0.572536 6_3:+79188094 Msa0960150:intron
GCATATGATGACGATGGGGT+TGG 0.573061 6_3:-79187975 None:intergenic
AAGTTACAAATGCATAATGA+AGG 0.574078 6_3:+79188698 Msa0960150:three_prime_UTR
CTGTGTCAGTGATGAAGCAT+CGG 0.574879 6_3:-79185447 None:intergenic
TGGCAAATGGGTCCTCCGCA+GGG 0.576406 6_3:+79187108 Msa0960150:CDS
GGGCTCTTCAAGCCCACCCG+TGG 0.576424 6_3:+79185340 Msa0960150:CDS
GATTTGTGATGACCGGCTCT+GGG 0.577411 6_3:+79188720 Msa0960150:three_prime_UTR
AATATACTATCTTGGATAAG+GGG 0.577936 6_3:+79188800 Msa0960150:three_prime_UTR
TCAACAATTTCCACCGTCAG+TGG 0.578286 6_3:+79186650 Msa0960150:CDS
GCTGAGAAATTGCCAAAACT+AGG 0.579045 6_3:-79186522 None:intergenic
AGGAGAGTTGAGGCATATCA+GGG 0.582512 6_3:+79185089 Msa0960150:CDS
ATTACGCACCCTCCGAACCT+AGG 0.582738 6_3:+79187930 Msa0960150:CDS
AATCTCCATCTGATACTCTA+CGG 0.582978 6_3:-79185277 None:intergenic
GAACTGGAGCAGGAAAGTAC+TGG 0.583420 6_3:-79187080 None:intergenic
ATTTCCTCCTTCTTGAAGTG+CGG 0.583644 6_3:-79184535 None:intergenic
AGGCATGGGATGGATTGCCT+AGG 0.584344 6_3:-79187947 None:intergenic
ACGGTTCCTACGGTAGGCAG+TGG 0.584624 6_3:-79187816 None:intergenic
AGAAATGTTGAAGTTCTGGA+AGG 0.584790 6_3:-79180397 None:intergenic
CTGATGCATATGATGACGAT+GGG 0.584853 6_3:-79187980 None:intergenic
ACTGTTTATTCCTATAGGAG+GGG 0.584994 6_3:+79188772 Msa0960150:three_prime_UTR
ATCTCTAACAGGTCGGACCA+CGG 0.585179 6_3:-79185357 None:intergenic
TTTCCGCTGTTTGGTTTGGG+GGG 0.588613 6_3:-79185419 None:intergenic
GAAGACCGTAGAGTATCAGA+TGG 0.589229 6_3:+79185272 Msa0960150:CDS
CGCCAATCATTGACAACTGG+AGG 0.591446 6_3:-79185245 None:intergenic
GGCTGTGAATAACTTGGCAC+AGG 0.592606 6_3:-79187389 None:intergenic
AATAAGAAACAACGACTGAA+GGG 0.593061 6_3:-79188878 None:intergenic
CGAATGGATTCCCTCCTTTG+GGG 0.593184 6_3:-79188573 None:intergenic
TGGACTCCTGGAGCATGAGA+AGG 0.593576 6_3:-79186406 None:intergenic
GGAACCTTGAAAGGATGGCA+GGG 0.595041 6_3:-79187883 None:intergenic
GGCACTGAAGTGCCACTGGG+TGG 0.595804 6_3:-79186549 None:intergenic
CCCGAACGAGCTAGAGACCT+GGG 0.598543 6_3:+79185320 Msa0960150:CDS
AGCTCTAACCCCTTCCCCAA+AGG 0.598694 6_3:+79188559 Msa0960150:CDS
TATGGTGACAGGTCTAGTCC+AGG 0.598747 6_3:+79185155 Msa0960150:CDS
GCTGTAGAAGTTAAACCAAG+TGG 0.599496 6_3:+79186921 Msa0960150:CDS
TCCAATGCAATATAATAATG+TGG 0.602071 6_3:+79187134 Msa0960150:CDS
GGTGGAGTCCATGCATGTGG+TGG 0.602942 6_3:-79187861 None:intergenic
TAACAGGTCGGACCACGGGT+GGG 0.604829 6_3:-79185352 None:intergenic
AATCTTACGACCTTTCCTCT+CGG 0.609041 6_3:-79184887 None:intergenic
GGAGGGTGCGTAATGCCTGA+AGG 0.609235 6_3:-79187921 None:intergenic
TCCCGAACGAGCTAGAGACC+TGG 0.613069 6_3:+79185319 Msa0960150:CDS
TATCCAGGACTTCTTCCACC+TGG 0.614393 6_3:-79185173 None:intergenic
ATCTACTGTTACAAATACAT+GGG 0.614768 6_3:-79188916 None:intergenic
TGCATTGGAAAGCCCTGCGG+AGG 0.614805 6_3:-79187120 None:intergenic
GTAATGTAAAGAATTATCCA+TGG 0.614944 6_3:+79188597 Msa0960150:exon
CTAACAGGTCGGACCACGGG+TGG 0.615242 6_3:-79185353 None:intergenic
GAAGTTACCGCACTTCAAGA+AGG 0.615478 6_3:+79184528 Msa0960150:CDS
CCAAAATATCTCTAACAGGT+CGG 0.617155 6_3:-79185364 None:intergenic
TTCTCAGCTTTCCCACCCAG+TGG 0.617961 6_3:+79186537 Msa0960150:CDS
CGATGCTTCATCACTGACAC+AGG 0.618098 6_3:+79185448 Msa0960150:CDS
CTAGCAGAAGCAGGGAACGT+TGG 0.618799 6_3:-79186627 None:intergenic
AGTTGGGAATTTCGGAACTG+AGG 0.619777 6_3:+79188474 Msa0960150:CDS
CTTACGACCTTTCCTCTCGG+TGG 0.622626 6_3:-79184884 None:intergenic
GGTGAAGAGTGAAAACGGAA+AGG 0.622706 6_3:-79180348 None:intergenic
AGAAGTTGTTGTTAGAGATG+GGG 0.624985 6_3:+79180688 Msa0960150:exon
TGGAGCAACAGGTTCAGGAT+CGG 0.626425 6_3:-79186206 None:intergenic
TGACAAACCACCGAGAGGAA+AGG 0.627098 6_3:+79184877 Msa0960150:CDS
GAAGCCCAATTGTCATCACT+GGG 0.627573 6_3:-79186286 None:intergenic
CATGCACCTTCTGTACCCAC+AGG 0.628811 6_3:+79186804 Msa0960150:CDS
CAAGTTATTCACAGCCGTCA+AGG 0.628835 6_3:+79187396 Msa0960150:CDS
CAACAATTTCCACCGTCAGT+GGG 0.629584 6_3:+79186651 Msa0960150:CDS
TCATATGCATCAGTCCCACC+AGG 0.629975 6_3:+79187990 Msa0960150:CDS
CTAACCCCTTCCCCAAAGGA+GGG 0.631904 6_3:+79188563 Msa0960150:CDS
CAACTAATATACCAATGCCA+AGG 0.633465 6_3:+79188128 Msa0960150:CDS
ATCAGATGGAGATTATAAGG+TGG 0.635684 6_3:+79185286 Msa0960150:CDS
TGAAGGTGGTACATTAGGCA+GGG 0.636868 6_3:-79187904 None:intergenic
CTATGAAAACAGGAGAGTTG+AGG 0.640259 6_3:+79185079 Msa0960150:CDS
GAACCTTGAAAGGATGGCAG+GGG 0.640950 6_3:-79187882 None:intergenic
TGGGACAAAACAGATTCAAG+CGG 0.641329 6_3:-79186361 None:intergenic
CCCTCCATACGAAGACACAC+AGG 0.642212 6_3:+79185124 Msa0960150:CDS
ACCCAGGGTTGAAGACTGCA+CGG 0.643062 6_3:-79187835 None:intergenic
TTGAAAGTCACATACACTTG+GGG 0.645670 6_3:-79187465 None:intergenic
CAATTTCCACCGTCAGTGGG+TGG 0.648109 6_3:+79186654 Msa0960150:CDS
CCGTGCAAGGAAGACATGGA+AGG 0.650622 6_3:-79187717 None:intergenic
TTATTATGAGGTGATACGGA+TGG 0.654263 6_3:-79186570 None:intergenic
ATTGTTGACTAGCAGAAGCA+GGG 0.663307 6_3:-79186635 None:intergenic
ACAGGATAAACATACCTGGT+GGG 0.664986 6_3:-79188004 None:intergenic
GGTACAGAAGGTGCATGCAA+TGG 0.666830 6_3:-79186798 None:intergenic
ACTGGATACCAAGCTGCCAG+AGG 0.668169 6_3:-79186125 None:intergenic
GTTACCGCACTTCAAGAAGG+AGG 0.668810 6_3:+79184531 Msa0960150:CDS
TTTACAGCACCACCCACTGA+CGG 0.672082 6_3:-79186663 None:intergenic
AATCCACCACTGCCTACCGT+AGG 0.677678 6_3:+79187810 Msa0960150:CDS
GGTGACAGGTCTAGTCCAGG+TGG 0.685795 6_3:+79185158 Msa0960150:CDS
GATGGCACTGAAGTGCCACT+GGG 0.689606 6_3:-79186552 None:intergenic
ACAGCACCACCCACTGACGG+TGG 0.689920 6_3:-79186660 None:intergenic
AATGCAATATAATAATGTGG+CGG 0.690651 6_3:+79187137 Msa0960150:CDS
GCACTGAAGTGCCACTGGGT+GGG 0.693382 6_3:-79186548 None:intergenic
ACTGATGCATATGATGACGA+TGG 0.699854 6_3:-79187981 None:intergenic
TATTGCATTGGAAAGCCCTG+CGG 0.701173 6_3:-79187123 None:intergenic
TGCATGTGGTGGATAACCCA+GGG 0.705185 6_3:-79187850 None:intergenic
ACCTCTGACAAACCACCGAG+AGG 0.706606 6_3:+79184872 Msa0960150:CDS
GAGGCATGATGGTATGCATG+TGG 0.707104 6_3:-79186852 None:intergenic
CTTCTGTACCCACAGGACAG+GGG 0.715786 6_3:+79186811 Msa0960150:CDS
AGAGTTGAGGCATATCAGGG+AGG 0.741370 6_3:+79185092 Msa0960150:CDS
AGAAGGTAAAGATTCCGACA+CGG 0.756226 6_3:-79186389 None:intergenic
TGATGCATATGATGACGATG+GGG 0.769784 6_3:-79187979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTAATTTTTTTATAGTT+TGG - chr6_3:79182226-79182245 None:intergenic 10.0%
!!! AGATTTTTATATTAGATTTT+GGG + chr6_3:79183251-79183270 Msa0960150:intron 10.0%
!! AAAGAAAATAATTAATGTAA+CGG - chr6_3:79183875-79183894 None:intergenic 10.0%
!!! AACTTTTTATTAAATAGAAT+AGG - chr6_3:79185625-79185644 None:intergenic 10.0%
!! ATTAAACAGTAAATTAAAAA+CGG - chr6_3:79185917-79185936 None:intergenic 10.0%
!!! TTCTTTTTAATTAAAAAGAA+AGG - chr6_3:79187268-79187287 None:intergenic 10.0%
!!! TTGTTTCTTATTAAATTTTT+GGG + chr6_3:79188889-79188908 Msa0960150:three_prime_UTR 10.0%
!! AAATGAATTACATTAGATTA+TGG + chr6_3:79180840-79180859 Msa0960150:intron 15.0%
!!! AAAATTGCTATTTTTTTGTT+GGG - chr6_3:79181387-79181406 None:intergenic 15.0%
!!! TTGCTATTTTTTAAAGATAA+GGG - chr6_3:79181443-79181462 None:intergenic 15.0%
!!! ATTGCTATTTTTTAAAGATA+AGG - chr6_3:79181444-79181463 None:intergenic 15.0%
!!! AAATTGCTATTTTTTTTTGT+TGG + chr6_3:79181533-79181552 Msa0960150:intron 15.0%
!!! AATTGCTATTTTTTTTTGTT+GGG + chr6_3:79181534-79181553 Msa0960150:intron 15.0%
!! TTGTAAAAATAAGTTATGAT+AGG + chr6_3:79183068-79183087 Msa0960150:intron 15.0%
!!! GAGATTTTTATATTAGATTT+TGG + chr6_3:79183250-79183269 Msa0960150:intron 15.0%
!!! ATAAGATTTTCTTATTAGTT+AGG + chr6_3:79183448-79183467 Msa0960150:intron 15.0%
!!! TAAGATTTTCTTATTAGTTA+GGG + chr6_3:79183449-79183468 Msa0960150:intron 15.0%
!!! TTAAAATTGGATGTTATTTA+TGG + chr6_3:79183481-79183500 Msa0960150:intron 15.0%
!!! TAGATTTTATTTCAAAGATA+AGG + chr6_3:79183550-79183569 Msa0960150:intron 15.0%
!! TCAAATTTATCTCTTTATTA+AGG - chr6_3:79183800-79183819 None:intergenic 15.0%
!!! ATTTTCTTTTATACTTTTGA+AGG + chr6_3:79183886-79183905 Msa0960150:intron 15.0%
!!! TTTTCTTTTATACTTTTGAA+GGG + chr6_3:79183887-79183906 Msa0960150:intron 15.0%
!!! AAGAGATTTATTTTAAAGAA+TGG + chr6_3:79184670-79184689 Msa0960150:CDS 15.0%
!!! AGAGATTTATTTTAAAGAAT+GGG + chr6_3:79184671-79184690 Msa0960150:CDS 15.0%
!! TTATGATTAATAATCATAGA+GGG + chr6_3:79187242-79187261 Msa0960150:intron 15.0%
!!! TTGTGTTTTATATGAATAAA+GGG - chr6_3:79188308-79188327 None:intergenic 15.0%
!!! ATTGTGTTTTATATGAATAA+AGG - chr6_3:79188309-79188328 None:intergenic 15.0%
!!! TAAAATTGATGATAATAGAT+TGG + chr6_3:79188397-79188416 Msa0960150:intron 15.0%
!!! GTTGTTTCTTATTAAATTTT+TGG + chr6_3:79188888-79188907 Msa0960150:three_prime_UTR 15.0%
!! AAAAATTGAAATGAAATGAC+GGG - chr6_3:79180289-79180308 None:intergenic 20.0%
!! GAAAAATTGAAATGAAATGA+CGG - chr6_3:79180290-79180309 None:intergenic 20.0%
!! ATGTATTAACTGTAATAGTT+TGG + chr6_3:79180782-79180801 Msa0960150:CDS 20.0%
!! ATTACGTTAAAATAGATTCT+AGG + chr6_3:79181342-79181361 Msa0960150:intron 20.0%
!!! AAATTGCTATTTTTTTGTTG+GGG - chr6_3:79181386-79181405 None:intergenic 20.0%
!!! CAAAATTGCTATTTTTTTGT+TGG - chr6_3:79181388-79181407 None:intergenic 20.0%
!!! CAACAAAAAAATAGCAATTT+TGG + chr6_3:79181386-79181405 Msa0960150:intron 20.0%
!!! TGCTTTTTTTTAAAGATAGA+GGG - chr6_3:79181412-79181431 None:intergenic 20.0%
!!! TCTTTAAAAAAAAGCACTTT+TGG + chr6_3:79181416-79181435 Msa0960150:intron 20.0%
!!! TGCTATTTTTTAAAGATAAG+GGG - chr6_3:79181442-79181461 None:intergenic 20.0%
!!! ATTGCTATTTTTTTTTGTTG+GGG + chr6_3:79181535-79181554 Msa0960150:intron 20.0%
!! TTGAATGAAGAAAATGAATT+AGG + chr6_3:79181745-79181764 Msa0960150:intron 20.0%
!! TGAATGAAGAAAATGAATTA+GGG + chr6_3:79181746-79181765 Msa0960150:intron 20.0%
!!! TAATTGTTATTACAATTAGC+TGG + chr6_3:79181772-79181791 Msa0960150:intron 20.0%
!! ATTGAATGAGAAAAATGAAT+TGG + chr6_3:79181181-79181200 Msa0960150:intron 20.0%
!!! TATTTTAATAAGTAGTTCAC+TGG + chr6_3:79183111-79183130 Msa0960150:intron 20.0%
!!! ATTTTAATAAGTAGTTCACT+GGG + chr6_3:79183112-79183131 Msa0960150:intron 20.0%
!!! AAGATTTTCTTATTAGTTAG+GGG + chr6_3:79183450-79183469 Msa0960150:intron 20.0%
!!! GTTGTGTGATATTTTTATTT+AGG + chr6_3:79183514-79183533 Msa0960150:intron 20.0%
!! ATACATAATATGCATAATTG+AGG - chr6_3:79183604-79183623 None:intergenic 20.0%
!!! TACATTTTAAAATGGCAATA+TGG - chr6_3:79185499-79185518 None:intergenic 20.0%
!! ATAAAAAGTTGAATTTCAGA+TGG + chr6_3:79185635-79185654 Msa0960150:intron 20.0%
!!! TGGGATATTTTATTTATGAA+TGG + chr6_3:79185757-79185776 Msa0960150:intron 20.0%
!! GTAAAATATTGTTTAGCTAA+TGG + chr6_3:79186715-79186734 Msa0960150:intron 20.0%
!!! ATTATTAATCATAAGGTGTT+TGG - chr6_3:79187236-79187255 None:intergenic 20.0%
!! CTCTATGATTATTAATCATA+AGG - chr6_3:79187243-79187262 None:intergenic 20.0%
!! CTTATGATTAATAATCATAG+AGG + chr6_3:79187241-79187260 Msa0960150:intron 20.0%
!! ACAAATTAAAAACATGCATT+TGG - chr6_3:79187315-79187334 None:intergenic 20.0%
!!! AAATGCATGTTTTTAATTTG+TGG + chr6_3:79187314-79187333 Msa0960150:intron 20.0%
!!! ACATGATTATTTTAATGTTG+TGG + chr6_3:79189031-79189050 Msa0960150:three_prime_UTR 20.0%
! GGGTTTATATATGATGATTA+TGG - chr6_3:79180372-79180391 None:intergenic 25.0%
!!! TTTTAAAGCTTGAACCAAAT+CGG + chr6_3:79180757-79180776 Msa0960150:CDS 25.0%
! ACATAATTCAATGTAATCAC+AGG - chr6_3:79181028-79181047 None:intergenic 25.0%
!!! GTGCTTTTTTTTAAAGATAG+AGG - chr6_3:79181413-79181432 None:intergenic 25.0%
!!! TTGCTATTTTTTTTTGTTGG+GGG + chr6_3:79181536-79181555 Msa0960150:intron 25.0%
!!! CTTTTAAAAACTTGCGATTT+TGG - chr6_3:79181563-79181582 None:intergenic 25.0%
!!! ATCGCAAGTTTTTAAAAGTT+AGG + chr6_3:79181565-79181584 Msa0960150:intron 25.0%
!!! TCGCAAGTTTTTAAAAGTTA+GGG + chr6_3:79181566-79181585 Msa0960150:intron 25.0%
! TTAGCTGGATTAATATATAG+TGG + chr6_3:79181787-79181806 Msa0960150:intron 25.0%
! AGTTCAATTAGTTAGTTAGT+TGG - chr6_3:79181828-79181847 None:intergenic 25.0%
! TTAGTGTCATGATTAGAAAA+AGG + chr6_3:79182071-79182090 Msa0960150:intron 25.0%
! TCAATTAGCTGAATATATAG+TGG + chr6_3:79182717-79182736 Msa0960150:intron 25.0%
! AATGTTCAACCATTTACAAA+TGG - chr6_3:79182960-79182979 None:intergenic 25.0%
!! TTTTAATAAGTAGTTCACTG+GGG + chr6_3:79183113-79183132 Msa0960150:intron 25.0%
!!! GTCTATGGTCTTTTTTATTT+AGG + chr6_3:79183171-79183190 Msa0960150:intron 25.0%
!!! CTTTTTTATTTAGGCGTAAA+TGG + chr6_3:79183180-79183199 Msa0960150:intron 25.0%
! TATTTCAAAGATAAGGTCAT+TGG + chr6_3:79183557-79183576 Msa0960150:intron 25.0%
! ATTTCAAAGATAAGGTCATT+GGG + chr6_3:79183558-79183577 Msa0960150:intron 25.0%
! TATTTCATTTCAATCTTCAC+AGG + chr6_3:79183645-79183664 Msa0960150:intron 25.0%
! AGTTATTAACCTTGTGATTA+TGG - chr6_3:79183726-79183745 None:intergenic 25.0%
!! TCTGTTTGAATTCTTTTCAT+AGG + chr6_3:79183821-79183840 Msa0960150:intron 25.0%
!!! ATTTGTTTCTAATCCATACT+TGG + chr6_3:79184107-79184126 Msa0960150:intron 25.0%
!!! TTTTGTAGTGTTGTTTGTAA+TGG + chr6_3:79184218-79184237 Msa0960150:intron 25.0%
! AAGCAGAATGAAAAGAAATA+TGG - chr6_3:79184594-79184613 None:intergenic 25.0%
! ATCATTCTGATTGTCATATT+TGG + chr6_3:79184776-79184795 Msa0960150:intron 25.0%
! TTTCTTAAAAAAGTGAATCC+TGG - chr6_3:79184920-79184939 None:intergenic 25.0%
!!! ATAATGATAGCATTAGCTTT+TGG + chr6_3:79185737-79185756 Msa0960150:intron 25.0%
!!! TAATGATAGCATTAGCTTTT+GGG + chr6_3:79185738-79185757 Msa0960150:intron 25.0%
! TAAATAATGAATCAACCTCA+CGG - chr6_3:79185809-79185828 None:intergenic 25.0%
!! ATGTTTTCAGTTATTCCTTT+GGG + chr6_3:79185860-79185879 Msa0960150:intron 25.0%
!!! TTATGTTTTCTTTTAAGACG+TGG + chr6_3:79185959-79185978 Msa0960150:intron 25.0%
!! CATTTGTCATTTACTTTGTT+TGG + chr6_3:79185987-79186006 Msa0960150:intron 25.0%
! TCTCAAATTTAATCTCTACT+TGG - chr6_3:79186159-79186178 None:intergenic 25.0%
! TACATTATTATGAGGTGATA+CGG - chr6_3:79186577-79186596 None:intergenic 25.0%
! TCATAATAATGTAGGACAAT+GGG + chr6_3:79186584-79186603 Msa0960150:CDS 25.0%
!! ATTTTACATGACAAGTTCAT+TGG - chr6_3:79186702-79186721 None:intergenic 25.0%
! TCCAATGCAATATAATAATG+TGG + chr6_3:79187134-79187153 Msa0960150:CDS 25.0%
! AATGCAATATAATAATGTGG+CGG + chr6_3:79187137-79187156 Msa0960150:CDS 25.0%
! ATGTGACTTTCAATGATTTA+TGG + chr6_3:79187475-79187494 Msa0960150:intron 25.0%
!!! TTTTTTTACATGCGATTCAT+TGG + chr6_3:79187657-79187676 Msa0960150:intron 25.0%
! ATTAACTGACGAATATTAAC+AGG - chr6_3:79188025-79188044 None:intergenic 25.0%
! GTAATGTAAAGAATTATCCA+TGG + chr6_3:79188597-79188616 Msa0960150:exon 25.0%
! GTTTGAATTTACAAAAACCA+TGG - chr6_3:79188617-79188636 None:intergenic 25.0%
! AAGTTACAAATGCATAATGA+AGG + chr6_3:79188698-79188717 Msa0960150:three_prime_UTR 25.0%
! TGTAAACTGTTTATTCCTAT+AGG + chr6_3:79188767-79188786 Msa0960150:three_prime_UTR 25.0%
! ACAATATACTATCTTGGATA+AGG + chr6_3:79188798-79188817 Msa0960150:three_prime_UTR 25.0%
! CAATATACTATCTTGGATAA+GGG + chr6_3:79188799-79188818 Msa0960150:three_prime_UTR 25.0%
! AATATACTATCTTGGATAAG+GGG + chr6_3:79188800-79188819 Msa0960150:three_prime_UTR 25.0%
! ATCTACTGTTACAAATACAT+GGG - chr6_3:79188919-79188938 None:intergenic 25.0%
! AATCTACTGTTACAAATACA+TGG - chr6_3:79188920-79188939 None:intergenic 25.0%
!! TAATGGTGTCTTCATATTTT+TGG + chr6_3:79188945-79188964 Msa0960150:three_prime_UTR 25.0%
AAGAAAGAAAGAGAGAGAAA+CGG - chr6_3:79180322-79180341 None:intergenic 30.0%
ATTATGGTGAAGAGTGAAAA+CGG - chr6_3:79180356-79180375 None:intergenic 30.0%
AGAAGATGAAGAAGAAGAAA+CGG - chr6_3:79180425-79180444 None:intergenic 30.0%
ATGATGATTGAAATTGCGTT+TGG + chr6_3:79180640-79180659 Msa0960150:five_prime_UTR 30.0%
! AAGAAGTTGTTGTTAGAGAT+GGG + chr6_3:79180687-79180706 Msa0960150:exon 30.0%
TGGTATATTTGTGTTGAATG+AGG + chr6_3:79180860-79180879 Msa0960150:intron 30.0%
GCTGAATATATTGTAGTAGT+TGG + chr6_3:79180924-79180943 Msa0960150:intron 30.0%
TGTTTGTTTATGTGCTTCAT+AGG + chr6_3:79181109-79181128 Msa0960150:intron 30.0%
! CTTACACAGTTGAAATTTTG+CGG + chr6_3:79181263-79181282 Msa0960150:intron 30.0%
AAAACATTGCAAAACTGCAA+AGG - chr6_3:79181496-79181515 None:intergenic 30.0%
! TTGCAATGTTTTGTAAAGCT+AGG + chr6_3:79181504-79181523 Msa0960150:intron 30.0%
! TGCAATGTTTTGTAAAGCTA+GGG + chr6_3:79181505-79181524 Msa0960150:intron 30.0%
!! CGCAAGTTTTTAAAAGTTAG+GGG + chr6_3:79181567-79181586 Msa0960150:intron 30.0%
!! GCAAGTTTTTAAAAGTTAGG+GGG + chr6_3:79181568-79181587 Msa0960150:intron 30.0%
!! ATCTAGCTTAAATGCACTTT+TGG - chr6_3:79181594-79181613 None:intergenic 30.0%
!! AAAATAACTAAGAAGCATCG+AGG + chr6_3:79181855-79181874 Msa0960150:intron 30.0%
TAGTATCACACATAACACAT+TGG - chr6_3:79182031-79182050 None:intergenic 30.0%
GTAAAGAATCAGAGAAGATA+TGG + chr6_3:79182359-79182378 Msa0960150:intron 30.0%
TGCAAAATATTGTGCAATAG+CGG - chr6_3:79182583-79182602 None:intergenic 30.0%
! AGTGTTTAAAGTCAATGAGT+TGG - chr6_3:79182791-79182810 None:intergenic 30.0%
TTGACTTTAAACACTCTCTT+AGG + chr6_3:79182796-79182815 Msa0960150:intron 30.0%
ATAGTCTGTCCATTTGTAAA+TGG + chr6_3:79182948-79182967 Msa0960150:intron 30.0%
TTACAAGACTATCTCATATC+AGG - chr6_3:79183054-79183073 None:intergenic 30.0%
ATAAGTTATGATAGGTCCAT+AGG + chr6_3:79183076-79183095 Msa0960150:intron 30.0%
AATAAGCCAAAAACAACCTA+TGG - chr6_3:79183095-79183114 None:intergenic 30.0%
! AGGCGTAAATGGTTTAAAAT+TGG + chr6_3:79183191-79183210 Msa0960150:intron 30.0%
! ACCCTTTTATATCATGCATT+CGG + chr6_3:79183279-79183298 Msa0960150:intron 30.0%
ACCGAATGCATGATATAAAA+GGG - chr6_3:79183283-79183302 None:intergenic 30.0%
AACCGAATGCATGATATAAA+AGG - chr6_3:79183284-79183303 None:intergenic 30.0%
TCTTATTAGTTAGGGGTAAA+TGG + chr6_3:79183457-79183476 Msa0960150:intron 30.0%
! AGGGGTAAATGGTTTAAAAT+TGG + chr6_3:79183468-79183487 Msa0960150:intron 30.0%
! ATTGGATGTTATTTATGGAC+AGG + chr6_3:79183486-79183505 Msa0960150:intron 30.0%
TTTCAAAGATAAGGTCATTG+GGG + chr6_3:79183559-79183578 Msa0960150:intron 30.0%
AAATTTGTGCACACATATTG+TGG - chr6_3:79183914-79183933 None:intergenic 30.0%
AATATGTGTGCACAAATTTC+TGG + chr6_3:79183915-79183934 Msa0960150:CDS 30.0%
TTTGTTTGCACTAATTGTAG+TGG + chr6_3:79183941-79183960 Msa0960150:CDS 30.0%
TGTATTCAACTCAAATCACA+GGG - chr6_3:79184024-79184043 None:intergenic 30.0%
ATGTATTCAACTCAAATCAC+AGG - chr6_3:79184025-79184044 None:intergenic 30.0%
! AATACATGTTTCAGAGTACT+TGG + chr6_3:79184038-79184057 Msa0960150:intron 30.0%
CAAAAAATCAGTAATACTGC+TGG - chr6_3:79184077-79184096 None:intergenic 30.0%
TCTGCAACTATACATGAAAA+CGG - chr6_3:79184744-79184763 None:intergenic 30.0%
AAACATGCTTAACAAACTCT+CGG - chr6_3:79184823-79184842 None:intergenic 30.0%
! GTTTGTTAAGCATGTTTATG+AGG + chr6_3:79184826-79184845 Msa0960150:CDS 30.0%
TTAAGCATGTTTATGAGGAT+AGG + chr6_3:79184831-79184850 Msa0960150:CDS 30.0%
TTAAAAAAGTGAATCCTGGA+GGG - chr6_3:79184916-79184935 None:intergenic 30.0%
AGAACAGACTAAGTAAGAAT+TGG - chr6_3:79185021-79185040 None:intergenic 30.0%
AGTATCAGATGGAGATTATA+AGG + chr6_3:79185283-79185302 Msa0960150:CDS 30.0%
GAGAAAATGTAATACCTCTT+AGG + chr6_3:79185387-79185406 Msa0960150:CDS 30.0%
! GATGTTTTCAGTTATTCCTT+TGG + chr6_3:79185859-79185878 Msa0960150:intron 30.0%
! TTCAAGCGGATTTAAATTTG+AGG - chr6_3:79186350-79186369 None:intergenic 30.0%
TTACAATATGTGTATCACCT+TGG - chr6_3:79186429-79186448 None:intergenic 30.0%
AGGTGATACACATATTGTAA+TGG + chr6_3:79186429-79186448 Msa0960150:intron 30.0%
GTATCACCTCATAATAATGT+AGG + chr6_3:79186576-79186595 Msa0960150:CDS 30.0%
CATTGTCCTACATTATTATG+AGG - chr6_3:79186585-79186604 None:intergenic 30.0%
CTCATAATAATGTAGGACAA+TGG + chr6_3:79186583-79186602 Msa0960150:CDS 30.0%
GTATTAATTTCACTCTGTTC+TGG + chr6_3:79186762-79186781 Msa0960150:intron 30.0%
CTAATTGTTAGCCAAACAAT+AGG - chr6_3:79187025-79187044 None:intergenic 30.0%
GCCACATTATTATATTGCAT+TGG - chr6_3:79187138-79187157 None:intergenic 30.0%
ATTGAAAGTCACATACACTT+GGG - chr6_3:79187469-79187488 None:intergenic 30.0%
AATGCAAGATGCTAACTTTA+TGG - chr6_3:79187531-79187550 None:intergenic 30.0%
! TCACAGTATATTGTTTCTCT+TGG + chr6_3:79187685-79187704 Msa0960150:intron 30.0%
ATTAACAGGATAAACATACC+TGG - chr6_3:79188011-79188030 None:intergenic 30.0%
!! TGAAAGTATTAACATGGTTC+AGG - chr6_3:79188083-79188102 None:intergenic 30.0%
TGAACCATGTTAATACTTTC+AGG + chr6_3:79188082-79188101 Msa0960150:intron 30.0%
GAACCATGTTAATACTTTCA+GGG + chr6_3:79188083-79188102 Msa0960150:intron 30.0%
GATTGAAGAGAAATTTACCT+TGG - chr6_3:79188148-79188167 None:intergenic 30.0%
ATGTATGGGAAATTAGATGA+AGG - chr6_3:79188252-79188271 None:intergenic 30.0%
ATCGCAATATTTCAAAAGCT+AGG - chr6_3:79188350-79188369 None:intergenic 30.0%
!!! TAGCTTTTGAAATATTGCGA+TGG + chr6_3:79188349-79188368 Msa0960150:intron 30.0%
!!! AGCTTTTGAAATATTGCGAT+GGG + chr6_3:79188350-79188369 Msa0960150:intron 30.0%
AAGATATTAACTCAATGTGC+AGG + chr6_3:79188446-79188465 Msa0960150:intron 30.0%
AATTCTTTACATTACCCGAA+TGG - chr6_3:79188592-79188611 None:intergenic 30.0%
AACTTACATGTGTTTGTACA+CGG - chr6_3:79188654-79188673 None:intergenic 30.0%
GTACAAACACATGTAAGTTT+CGG + chr6_3:79188655-79188674 Msa0960150:three_prime_UTR 30.0%
GGTCGAAGTGAAAAATATTT+CGG + chr6_3:79188741-79188760 Msa0960150:three_prime_UTR 30.0%
AAACTGTTTATTCCTATAGG+AGG + chr6_3:79188770-79188789 Msa0960150:three_prime_UTR 30.0%
AACTGTTTATTCCTATAGGA+GGG + chr6_3:79188771-79188790 Msa0960150:three_prime_UTR 30.0%
TAGATAGAGAGATTGAATGA+AGG + chr6_3:79188843-79188862 Msa0960150:three_prime_UTR 30.0%
AGATAGAGAGATTGAATGAA+GGG + chr6_3:79188844-79188863 Msa0960150:three_prime_UTR 30.0%
AATAAGAAACAACGACTGAA+GGG - chr6_3:79188881-79188900 None:intergenic 30.0%
TAATAAGAAACAACGACTGA+AGG - chr6_3:79188882-79188901 None:intergenic 30.0%
TAACAGTAGATTGAGAGTAA+TGG + chr6_3:79188928-79188947 Msa0960150:three_prime_UTR 30.0%
!! AGAAATGTTGAAGTTCTGGA+AGG - chr6_3:79180400-79180419 None:intergenic 35.0%
GGTTAGAAATGTTGAAGTTC+TGG - chr6_3:79180404-79180423 None:intergenic 35.0%
! GAAGAAGTTGTTGTTAGAGA+TGG + chr6_3:79180686-79180705 Msa0960150:exon 35.0%
! AGAAGTTGTTGTTAGAGATG+GGG + chr6_3:79180688-79180707 Msa0960150:exon 35.0%
CAGTTAATACATCTCCGATT+TGG - chr6_3:79180774-79180793 None:intergenic 35.0%
TTCAATGTAATCACAGGTGT+CGG - chr6_3:79181022-79181041 None:intergenic 35.0%
! GCAATGTTTTGTAAAGCTAG+GGG + chr6_3:79181506-79181525 Msa0960150:intron 35.0%
! CAATGTTTTGTAAAGCTAGG+GGG + chr6_3:79181507-79181526 Msa0960150:intron 35.0%
AGTTTGGCTAATTCAGTAGT+TGG - chr6_3:79182210-79182229 None:intergenic 35.0%
AAATGCATCTGCGATTCAAT+TGG - chr6_3:79182259-79182278 None:intergenic 35.0%
! TCAAATGTAGAAGCTAGCTT+AGG + chr6_3:79182332-79182351 Msa0960150:intron 35.0%
TTGCACTAAATAGCGTATCA+CGG + chr6_3:79182598-79182617 Msa0960150:intron 35.0%
! TTTTCTCATTCGATCAGTGT+TGG - chr6_3:79182675-79182694 None:intergenic 35.0%
CACTCTCTTAGGTAATAGAT+TGG + chr6_3:79182807-79182826 Msa0960150:intron 35.0%
TGAATTGCAACTAGCTAACT+TGG + chr6_3:79182869-79182888 Msa0960150:intron 35.0%
TACAAATGGACAGACTATGT+CGG - chr6_3:79182946-79182965 None:intergenic 35.0%
TCAGGAGATAAGTTCAAATG+AGG - chr6_3:79183036-79183055 None:intergenic 35.0%
!! ATAGGTCCATAGGTTGTTTT+TGG + chr6_3:79183086-79183105 Msa0960150:intron 35.0%
AAAAGACCATAGACACGTTT+GGG - chr6_3:79183165-79183184 None:intergenic 35.0%
AAAAAGACCATAGACACGTT+TGG - chr6_3:79183166-79183185 None:intergenic 35.0%
TATATCATGCATTCGGTTAG+TGG + chr6_3:79183286-79183305 Msa0960150:intron 35.0%
!! TATCGTCCTCATTTTTGTAG+TGG + chr6_3:79183330-79183349 Msa0960150:intron 35.0%
!! ATCGTCCTCATTTTTGTAGT+GGG + chr6_3:79183331-79183350 Msa0960150:intron 35.0%
!!! ATTTTTGTAGTGGGCAACTT+GGG + chr6_3:79183340-79183359 Msa0960150:intron 35.0%
! ATTACGAGCAGTGCTTTAAA+AGG - chr6_3:79183430-79183449 None:intergenic 35.0%
TTATGTATCATCGTTGCTTG+AGG + chr6_3:79183616-79183635 Msa0960150:intron 35.0%
! TTGTGATTATGGTAGTGTAC+AGG - chr6_3:79183715-79183734 None:intergenic 35.0%
TGTACACTACCATAATCACA+AGG + chr6_3:79183714-79183733 Msa0960150:intron 35.0%
TTCCAATGGAATCTAGAGAA+TGG - chr6_3:79183768-79183787 None:intergenic 35.0%
CTAGATTCCATTGGAAAAAC+AGG + chr6_3:79183772-79183791 Msa0960150:intron 35.0%
!! TAAGGATCCTGTTTTTCCAA+TGG - chr6_3:79183782-79183801 None:intergenic 35.0%
AACAGAAGTAAGATTTGCGT+AGG - chr6_3:79184267-79184286 None:intergenic 35.0%
TACGCAAATCTTACTTCTGT+TGG + chr6_3:79184266-79184285 Msa0960150:intron 35.0%
!!! CATGAGTTTTGGAGAAAAGT+GGG - chr6_3:79184433-79184452 None:intergenic 35.0%
! CACACAAAAACCATGAGTTT+TGG - chr6_3:79184444-79184463 None:intergenic 35.0%
TCACACGATGTGTAAATTCA+CGG - chr6_3:79184476-79184495 None:intergenic 35.0%
TCGTGTGAAATCAGTTTCAA+TGG + chr6_3:79184488-79184507 Msa0960150:CDS 35.0%
CTTAAAAAAGTGAATCCTGG+AGG - chr6_3:79184917-79184936 None:intergenic 35.0%
AAGACGATTCCTATGAAAAC+AGG + chr6_3:79185069-79185088 Msa0960150:CDS 35.0%
CTACTTTCTTGATCATATCC+AGG - chr6_3:79185191-79185210 None:intergenic 35.0%
CTGGATATGATCAAGAAAGT+AGG + chr6_3:79185189-79185208 Msa0960150:CDS 35.0%
GATCAAGAAAGTAGGCAATA+TGG + chr6_3:79185197-79185216 Msa0960150:CDS 35.0%
AATCTCCATCTGATACTCTA+CGG - chr6_3:79185280-79185299 None:intergenic 35.0%
ATCAGATGGAGATTATAAGG+TGG + chr6_3:79185286-79185305 Msa0960150:CDS 35.0%
CCAAAATATCTCTAACAGGT+CGG - chr6_3:79185367-79185386 None:intergenic 35.0%
! CGACCTGTTAGAGATATTTT+GGG + chr6_3:79185365-79185384 Msa0960150:CDS 35.0%
TCTCCCAAAATATCTCTAAC+AGG - chr6_3:79185371-79185390 None:intergenic 35.0%
GTAATACCTCTTAGGATAAG+TGG + chr6_3:79185395-79185414 Msa0960150:CDS 35.0%
ATAGAATAGGCCATTATGAG+TGG - chr6_3:79185612-79185631 None:intergenic 35.0%
TCACGGAAAAGATTAAGACT+CGG - chr6_3:79185792-79185811 None:intergenic 35.0%
GATCGGCATCAAAATCAATA+AGG - chr6_3:79186192-79186211 None:intergenic 35.0%
AAATCCCAGTGATGACAATT+GGG + chr6_3:79186282-79186301 Msa0960150:CDS 35.0%
!! TTCTTTTGATGTTGCTTCTG+AGG + chr6_3:79186306-79186325 Msa0960150:CDS 35.0%
! GGATTTAAATTTGAGGTGCT+TGG - chr6_3:79186343-79186362 None:intergenic 35.0%
TTATTATGAGGTGATACGGA+TGG - chr6_3:79186573-79186592 None:intergenic 35.0%
TAAGTAGTCACGATTACTTC+AGG - chr6_3:79186960-79186979 None:intergenic 35.0%
ACTTGCATATGCCTATTGTT+TGG + chr6_3:79187011-79187030 Msa0960150:intron 35.0%
GGCTAACAATTAGTTGTGAT+TGG + chr6_3:79187032-79187051 Msa0960150:intron 35.0%
ATCTGGTAAGCTAATCATTC+TGG - chr6_3:79187175-79187194 None:intergenic 35.0%
AAACGCATACTAAGACAATC+TGG - chr6_3:79187192-79187211 None:intergenic 35.0%
AGATTGTCTTAGTATGCGTT+TGG + chr6_3:79187191-79187210 Msa0960150:intron 35.0%
!! AATGGATTTGTTGACCTTGA+CGG - chr6_3:79187413-79187432 None:intergenic 35.0%
TTGAAAGTCACATACACTTG+GGG - chr6_3:79187468-79187487 None:intergenic 35.0%
CATTGAAAGTCACATACACT+TGG - chr6_3:79187470-79187489 None:intergenic 35.0%
! GTTCCAACCTTTTCAATGAT+GGG - chr6_3:79187618-79187637 None:intergenic 35.0%
! TGTTCCAACCTTTTCAATGA+TGG - chr6_3:79187619-79187638 None:intergenic 35.0%
CTGATAAAAAGCAAACGACT+AGG - chr6_3:79188057-79188076 None:intergenic 35.0%
!! TGACCCTGAAAGTATTAACA+TGG - chr6_3:79188089-79188108 None:intergenic 35.0%
CAACTAATATACCAATGCCA+AGG + chr6_3:79188128-79188147 Msa0960150:CDS 35.0%
AGAGAAATTTACCTTGGCAT+TGG - chr6_3:79188142-79188161 None:intergenic 35.0%
CTTCTTCGAAACTCGTATTT+GGG + chr6_3:79188220-79188239 Msa0960150:intron 35.0%
TAGCATGAACTTCAATGATG+CGG + chr6_3:79188278-79188297 Msa0960150:intron 35.0%
GTTTCGGTTTCTATTGTTTG+TGG + chr6_3:79188671-79188690 Msa0960150:three_prime_UTR 35.0%
AATGAAGGATTTGTGATGAC+CGG + chr6_3:79188713-79188732 Msa0960150:three_prime_UTR 35.0%
ACTGTTTATTCCTATAGGAG+GGG + chr6_3:79188772-79188791 Msa0960150:three_prime_UTR 35.0%
GATAGAGAGATTGAATGAAG+GGG + chr6_3:79188845-79188864 Msa0960150:three_prime_UTR 35.0%
ATAGAGAGATTGAATGAAGG+GGG + chr6_3:79188846-79188865 Msa0960150:three_prime_UTR 35.0%
!! TGAAGTTCTGGAAGGTTCTT+GGG - chr6_3:79180392-79180411 None:intergenic 40.0%
!! TTGAAGTTCTGGAAGGTTCT+TGG - chr6_3:79180393-79180412 None:intergenic 40.0%
GCACAGACACTTATGATTGA+AGG + chr6_3:79180961-79180980 Msa0960150:intron 40.0%
! TTATGATTGAAGGTGCATCC+TGG + chr6_3:79180971-79180990 Msa0960150:intron 40.0%
GTGACGTGTCTAATAATTGG+GGG - chr6_3:79181472-79181491 None:intergenic 40.0%
CGTGACGTGTCTAATAATTG+GGG - chr6_3:79181473-79181492 None:intergenic 40.0%
GCGTGACGTGTCTAATAATT+GGG - chr6_3:79181474-79181493 None:intergenic 40.0%
AATCTCGTCTCTGATTCTCT+AGG - chr6_3:79181990-79182009 None:intergenic 40.0%
GAATGCAGTGTTGTCAATTG+CGG + chr6_3:79182496-79182515 Msa0960150:intron 40.0%
TGTTCAAATCCGCTATGCAA+CGG + chr6_3:79182538-79182557 Msa0960150:intron 40.0%
TTGTGCAATAGCGGCTATAT+TGG - chr6_3:79182574-79182593 None:intergenic 40.0%
TTGGTAAATAGCGGCTATAG+TGG - chr6_3:79182656-79182675 None:intergenic 40.0%
!! CGATCAGTGTTGGTAAATAG+CGG - chr6_3:79182665-79182684 None:intergenic 40.0%
CTAGCTAACTTGGTAGAATG+TGG + chr6_3:79182879-79182898 Msa0960150:intron 40.0%
ACGGGAGCAATCATATCATA+TGG - chr6_3:79182908-79182927 None:intergenic 40.0%
TCGGTTTCACATTGCATGAA+CGG - chr6_3:79182927-79182946 None:intergenic 40.0%
AATGGTTGAACATTAGAGCG+TGG + chr6_3:79182966-79182985 Msa0960150:intron 40.0%
ATGGTTGAACATTAGAGCGT+GGG + chr6_3:79182967-79182986 Msa0960150:intron 40.0%
TCTATTCCCAAACGTGTCTA+TGG + chr6_3:79183156-79183175 Msa0960150:intron 40.0%
TTAGTGGTTAGCAAGGTGAT+AGG + chr6_3:79183302-79183321 Msa0960150:intron 40.0%
AGTTGCCCACTACAAAAATG+AGG - chr6_3:79183339-79183358 None:intergenic 40.0%
!!! CATTTTTGTAGTGGGCAACT+TGG + chr6_3:79183339-79183358 Msa0960150:intron 40.0%
!!! TTTTTGTAGTGGGCAACTTG+GGG + chr6_3:79183341-79183360 Msa0960150:intron 40.0%
! TTATGGTAGTGTACAGGCTA+CGG - chr6_3:79183709-79183728 None:intergenic 40.0%
AATCTAGAGAATGGTGCAAC+AGG - chr6_3:79183759-79183778 None:intergenic 40.0%
CACCATTCTCTAGATTCCAT+TGG + chr6_3:79183763-79183782 Msa0960150:intron 40.0%
! ACATGTTTCAGAGTACTTGG+TGG + chr6_3:79184041-79184060 Msa0960150:intron 40.0%
GTAATACTGCTGGATAAAGC+AGG - chr6_3:79184067-79184086 None:intergenic 40.0%
!!! CCATGAGTTTTGGAGAAAAG+TGG - chr6_3:79184434-79184453 None:intergenic 40.0%
!! CCACTTTTCTCCAAAACTCA+TGG + chr6_3:79184431-79184450 Msa0960150:intron 40.0%
ATTTCCTCCTTCTTGAAGTG+CGG - chr6_3:79184538-79184557 None:intergenic 40.0%
ACTTCAAGAAGGAGGAAATC+AGG + chr6_3:79184539-79184558 Msa0960150:CDS 40.0%
!! TTGGTGCCAGTAATGTTAAC+AGG + chr6_3:79184795-79184814 Msa0960150:intron 40.0%
TATGAGGATAGGAGATTCAC+TGG + chr6_3:79184842-79184861 Msa0960150:CDS 40.0%
ATAGGAGATTCACTGGAGAT+AGG + chr6_3:79184849-79184868 Msa0960150:CDS 40.0%
AATCTTACGACCTTTCCTCT+CGG - chr6_3:79184890-79184909 None:intergenic 40.0%
! TCTTGTGTTGTGTGTTGTTC+AGG + chr6_3:79185040-79185059 Msa0960150:intron 40.0%
! CTTGTGTTGTGTGTTGTTCA+GGG + chr6_3:79185041-79185060 Msa0960150:intron 40.0%
! CTCAACTCTCCTGTTTTCAT+AGG - chr6_3:79185081-79185100 None:intergenic 40.0%
CTATGAAAACAGGAGAGTTG+AGG + chr6_3:79185079-79185098 Msa0960150:CDS 40.0%
! CCGACCTGTTAGAGATATTT+TGG + chr6_3:79185364-79185383 Msa0960150:CDS 40.0%
GTTCTAATACCGTGTCATGA+AGG - chr6_3:79185555-79185574 None:intergenic 40.0%
TCTGTCTTTGCCACTCATAA+TGG + chr6_3:79185599-79185618 Msa0960150:intron 40.0%
CACGGAAAAGATTAAGACTC+GGG - chr6_3:79185791-79185810 None:intergenic 40.0%
! GAGTCTTAATCTTTTCCGTG+AGG + chr6_3:79185791-79185810 Msa0960150:intron 40.0%
GAAACATCTCTAATGCCCAA+AGG - chr6_3:79185878-79185897 None:intergenic 40.0%
GAAATCCCAGTGATGACAAT+TGG + chr6_3:79186281-79186300 Msa0960150:CDS 40.0%
TGGGACAAAACAGATTCAAG+CGG - chr6_3:79186364-79186383 None:intergenic 40.0%
AGAAGGTAAAGATTCCGACA+CGG - chr6_3:79186392-79186411 None:intergenic 40.0%
! GACTCATCTGTTTTATCTGC+AGG + chr6_3:79186480-79186499 Msa0960150:intron 40.0%
GCTGAGAAATTGCCAAAACT+AGG - chr6_3:79186525-79186544 None:intergenic 40.0%
! ATTGTTGACTAGCAGAAGCA+GGG - chr6_3:79186638-79186657 None:intergenic 40.0%
! AATTGTTGACTAGCAGAAGC+AGG - chr6_3:79186639-79186658 None:intergenic 40.0%
GTGCTGTAAATAGTCAGGTT+TGG + chr6_3:79186676-79186695 Msa0960150:intron 40.0%
CTGTTAAAAGCCTCATTAGC+AGG - chr6_3:79186882-79186901 None:intergenic 40.0%
! GGTTTAACTTCTACAGCAGA+AGG - chr6_3:79186918-79186937 None:intergenic 40.0%
GCTGTAGAAGTTAAACCAAG+TGG + chr6_3:79186921-79186940 Msa0960150:CDS 40.0%
CAATTAGTTGTGATTGGTGC+AGG + chr6_3:79187038-79187057 Msa0960150:intron 40.0%
TGTTTACTGCTGACATCGAA+TGG - chr6_3:79187431-79187450 None:intergenic 40.0%
ATACACTTGGGGCTTGATTT+GGG - chr6_3:79187457-79187476 None:intergenic 40.0%
ATGCTCTCCCATCATTGAAA+AGG + chr6_3:79187608-79187627 Msa0960150:intron 40.0%
TCTCCCATCATTGAAAAGGT+TGG + chr6_3:79187612-79187631 Msa0960150:intron 40.0%
! TGATGCATATGATGACGATG+GGG - chr6_3:79187982-79188001 None:intergenic 40.0%
! CTGATGCATATGATGACGAT+GGG - chr6_3:79187983-79188002 None:intergenic 40.0%
! ACTGATGCATATGATGACGA+TGG - chr6_3:79187984-79188003 None:intergenic 40.0%
ACAGGATAAACATACCTGGT+GGG - chr6_3:79188007-79188026 None:intergenic 40.0%
AACAGGATAAACATACCTGG+TGG - chr6_3:79188008-79188027 None:intergenic 40.0%
TAAGCTTAAACAGCATGCAC+AGG - chr6_3:79188187-79188206 None:intergenic 40.0%
GCTTCTTCGAAACTCGTATT+TGG + chr6_3:79188219-79188238 Msa0960150:intron 40.0%
TCATGCTATGCAGCATGTAT+GGG - chr6_3:79188266-79188285 None:intergenic 40.0%
TTCATGCTATGCAGCATGTA+TGG - chr6_3:79188267-79188286 None:intergenic 40.0%
ATTAACTCAATGTGCAGGCA+AGG + chr6_3:79188451-79188470 Msa0960150:intron 40.0%
CGGTTTCTATTGTTTGTGGA+TGG + chr6_3:79188675-79188694 Msa0960150:three_prime_UTR 40.0%
CTGTTTATTCCTATAGGAGG+GGG + chr6_3:79188773-79188792 Msa0960150:three_prime_UTR 40.0%
GGGGAGACAATATACTATCT+TGG + chr6_3:79188792-79188811 Msa0960150:three_prime_UTR 40.0%
GGTGAAGAGTGAAAACGGAA+AGG - chr6_3:79180351-79180370 None:intergenic 45.0%
TGTTGTTAGAGATGGGGACT+CGG + chr6_3:79180694-79180713 Msa0960150:exon 45.0%
GGCGTGACGTGTCTAATAAT+TGG - chr6_3:79181475-79181494 None:intergenic 45.0%
CGGTTTCACATTGCATGAAC+GGG - chr6_3:79182926-79182945 None:intergenic 45.0%
TGGTTGAACATTAGAGCGTG+GGG + chr6_3:79182968-79182987 Msa0960150:intron 45.0%
AAGTAGTTCACTGGGGTAAG+TGG + chr6_3:79183120-79183139 Msa0960150:intron 45.0%
CATTCGGTTAGTGGTTAGCA+AGG + chr6_3:79183295-79183314 Msa0960150:intron 45.0%
! TAAGGTCATTGGGGTGTTTG+AGG + chr6_3:79183568-79183587 Msa0960150:intron 45.0%
CATGTGCAAACTGCCAAGTA+TGG - chr6_3:79184123-79184142 None:intergenic 45.0%
AGTTTGCACATGTCTTGCTG+AGG + chr6_3:79184131-79184150 Msa0960150:intron 45.0%
GAGAAAAGTGGGCAGTTGAA+AGG - chr6_3:79184422-79184441 None:intergenic 45.0%
GAAGTTACCGCACTTCAAGA+AGG + chr6_3:79184528-79184547 Msa0960150:CDS 45.0%
!! GGCACGAGTTTTAGCACAAA+AGG - chr6_3:79184573-79184592 None:intergenic 45.0%
CAAGTACTTACCTGCTGTCA+GGG - chr6_3:79184716-79184735 None:intergenic 45.0%
TCGGAGCCTGTTAACATTAC+TGG - chr6_3:79184804-79184823 None:intergenic 45.0%
! GTCGTAAGATTTTACCCTCC+AGG + chr6_3:79184899-79184918 Msa0960150:intron 45.0%
AGGAGAGTTGAGGCATATCA+GGG + chr6_3:79185089-79185108 Msa0960150:CDS 45.0%
GGCGATTATAAGAGAAGTCC+CGG + chr6_3:79185218-79185237 Msa0960150:CDS 45.0%
GTCCTCCAGTTGTCAATGAT+TGG + chr6_3:79185243-79185262 Msa0960150:CDS 45.0%
! GAAGACCGTAGAGTATCAGA+TGG + chr6_3:79185272-79185291 Msa0960150:CDS 45.0%
!!! TTTTCCGCTGTTTGGTTTGG+GGG - chr6_3:79185423-79185442 None:intergenic 45.0%
!!! CTTTTCCGCTGTTTGGTTTG+GGG - chr6_3:79185424-79185443 None:intergenic 45.0%
!! GCTTTTCCGCTGTTTGGTTT+GGG - chr6_3:79185425-79185444 None:intergenic 45.0%
! AGCTTTTCCGCTGTTTGGTT+TGG - chr6_3:79185426-79185445 None:intergenic 45.0%
CTGTGTCAGTGATGAAGCAT+CGG - chr6_3:79185450-79185469 None:intergenic 45.0%
TGTGTTCAGCCTTCATGACA+CGG + chr6_3:79185543-79185562 Msa0960150:intron 45.0%
AACTCAGCCACCTCACTAAA+GGG - chr6_3:79186046-79186065 None:intergenic 45.0%
TTTCAGAGAACTGCATCCTC+TGG + chr6_3:79186109-79186128 Msa0960150:intron 45.0%
! CTCTACTTGGCTTTCGTTAC+TGG - chr6_3:79186146-79186165 None:intergenic 45.0%
TTGAGGCACACTGGATTGTT+GGG - chr6_3:79186245-79186264 None:intergenic 45.0%
GGATTTCCTGACTGCAAAAC+AGG - chr6_3:79186268-79186287 None:intergenic 45.0%
GAAGCCCAATTGTCATCACT+GGG - chr6_3:79186289-79186308 None:intergenic 45.0%
AGAAGCCCAATTGTCATCAC+TGG - chr6_3:79186290-79186309 None:intergenic 45.0%
TTTGTCCCAATTGTCCGTGT+CGG + chr6_3:79186375-79186394 Msa0960150:CDS 45.0%
AGATTCCGACACGGACAATT+GGG - chr6_3:79186383-79186402 None:intergenic 45.0%
AAGATTCCGACACGGACAAT+TGG - chr6_3:79186384-79186403 None:intergenic 45.0%
TCTTTACCTTCTCATGCTCC+AGG + chr6_3:79186400-79186419 Msa0960150:CDS 45.0%
TCAACAATTTCCACCGTCAG+TGG + chr6_3:79186650-79186669 Msa0960150:CDS 45.0%
CAACAATTTCCACCGTCAGT+GGG + chr6_3:79186651-79186670 Msa0960150:CDS 45.0%
TGATGGTATGCATGTGGCAT+TGG - chr6_3:79186849-79186868 None:intergenic 45.0%
GGAAGTTCTGTTCTTCCACT+TGG - chr6_3:79186939-79186958 None:intergenic 45.0%
TACTTTCCTGCTCCAGTTCA+AGG + chr6_3:79187084-79187103 Msa0960150:CDS 45.0%
TCCAGTTCAAGGTTGGCAAA+TGG + chr6_3:79187095-79187114 Msa0960150:CDS 45.0%
CCAGTTCAAGGTTGGCAAAT+GGG + chr6_3:79187096-79187115 Msa0960150:CDS 45.0%
TATTGCATTGGAAAGCCCTG+CGG - chr6_3:79187126-79187145 None:intergenic 45.0%
CTTGACGGCTGTGAATAACT+TGG - chr6_3:79187398-79187417 None:intergenic 45.0%
CAAGTTATTCACAGCCGTCA+AGG + chr6_3:79187396-79187415 Msa0960150:CDS 45.0%
! TACACTTGGGGCTTGATTTG+GGG - chr6_3:79187456-79187475 None:intergenic 45.0%
CATACACTTGGGGCTTGATT+TGG - chr6_3:79187458-79187477 None:intergenic 45.0%
ATGCATGCAATGAACTGCTC+TGG - chr6_3:79187788-79187807 None:intergenic 45.0%
AGAGCAGTTCATTGCATGCA+TGG + chr6_3:79187787-79187806 Msa0960150:CDS 45.0%
ATTAGGCAGGGAACCTTGAA+AGG - chr6_3:79187895-79187914 None:intergenic 45.0%
TGAAGGTGGTACATTAGGCA+GGG - chr6_3:79187907-79187926 None:intergenic 45.0%
ATGCCTGAAGGTGGTACATT+AGG - chr6_3:79187912-79187931 None:intergenic 45.0%
ATACTTTCAGGGTCATACGC+TGG + chr6_3:79188094-79188113 Msa0960150:intron 45.0%
TACTTTCAGGGTCATACGCT+GGG + chr6_3:79188095-79188114 Msa0960150:intron 45.0%
AGGCAAGGAGTTGGGAATTT+CGG + chr6_3:79188466-79188485 Msa0960150:intron 45.0%
AGTTGGGAATTTCGGAACTG+AGG + chr6_3:79188474-79188493 Msa0960150:CDS 45.0%
GTTGGGAATTTCGGAACTGA+GGG + chr6_3:79188475-79188494 Msa0960150:CDS 45.0%
GGAACTGAGGGAAACATGTT+CGG + chr6_3:79188487-79188506 Msa0960150:CDS 45.0%
ATATTGTCTCCCCCTCCTAT+AGG - chr6_3:79188785-79188804 None:intergenic 45.0%
TCTTGGATAAGGGGAGTTTG+AGG + chr6_3:79188809-79188828 Msa0960150:three_prime_UTR 45.0%
TTCTGAGTCGTGCTCTTTCA+TGG + chr6_3:79188971-79188990 Msa0960150:three_prime_UTR 45.0%
!!! TTTTATATTACATTTTAAAA+TGG - chr6_3:79185507-79185526 None:intergenic 5.0%
!! GTAATCACAGGTGTCGGTCT+TGG - chr6_3:79181016-79181035 None:intergenic 50.0%
GCTATAGCACCGTTGCATAG+CGG - chr6_3:79182550-79182569 None:intergenic 50.0%
TGAACATTAGAGCGTGGGGT+TGG + chr6_3:79182972-79182991 Msa0960150:intron 50.0%
AGAATGGTGCAACAGGTGCT+GGG - chr6_3:79183752-79183771 None:intergenic 50.0%
GTTACCGCACTTCAAGAAGG+AGG + chr6_3:79184531-79184550 Msa0960150:CDS 50.0%
GCAATTCTTTCCCTGACAGC+AGG + chr6_3:79184703-79184722 Msa0960150:CDS 50.0%
GCAAGTACTTACCTGCTGTC+AGG - chr6_3:79184717-79184736 None:intergenic 50.0%
TGACAAACCACCGAGAGGAA+AGG + chr6_3:79184877-79184896 Msa0960150:CDS 50.0%
CAGGAGAGTTGAGGCATATC+AGG + chr6_3:79185088-79185107 Msa0960150:CDS 50.0%
AGAGTTGAGGCATATCAGGG+AGG + chr6_3:79185092-79185111 Msa0960150:CDS 50.0%
CCTGTGTGTCTTCGTATGGA+GGG - chr6_3:79185127-79185146 None:intergenic 50.0%
TCCTGTGTGTCTTCGTATGG+AGG - chr6_3:79185128-79185147 None:intergenic 50.0%
CGTTCCTGTGTGTCTTCGTA+TGG - chr6_3:79185131-79185150 None:intergenic 50.0%
GACACACAGGAACGTCGTTA+TGG + chr6_3:79185137-79185156 Msa0960150:CDS 50.0%
AGGAACGTCGTTATGGTGAC+AGG + chr6_3:79185144-79185163 Msa0960150:CDS 50.0%
TATGGTGACAGGTCTAGTCC+AGG + chr6_3:79185155-79185174 Msa0960150:CDS 50.0%
TATCCAGGACTTCTTCCACC+TGG - chr6_3:79185176-79185195 None:intergenic 50.0%
ATTGACAACTGGAGGACGAC+CGG - chr6_3:79185240-79185259 None:intergenic 50.0%
CGCCAATCATTGACAACTGG+AGG - chr6_3:79185248-79185267 None:intergenic 50.0%
CGACGCCAATCATTGACAAC+TGG - chr6_3:79185251-79185270 None:intergenic 50.0%
ATCTCTAACAGGTCGGACCA+CGG - chr6_3:79185360-79185379 None:intergenic 50.0%
!! TTTCCGCTGTTTGGTTTGGG+GGG - chr6_3:79185422-79185441 None:intergenic 50.0%
CGATGCTTCATCACTGACAC+AGG + chr6_3:79185448-79185467 Msa0960150:CDS 50.0%
! AGCATGTCGGCATTGAAGCA+TGG - chr6_3:79185677-79185696 None:intergenic 50.0%
ATGCCGACATGCTCTTCTTG+AGG + chr6_3:79185684-79185703 Msa0960150:intron 50.0%
TGCCGACATGCTCTTCTTGA+GGG + chr6_3:79185685-79185704 Msa0960150:intron 50.0%
! CTCCCTCAAGAAGAGCATGT+CGG - chr6_3:79185690-79185709 None:intergenic 50.0%
TCTCATCTCCCCCTTTAGTG+AGG + chr6_3:79186033-79186052 Msa0960150:intron 50.0%
ACTCAGCCACCTCACTAAAG+GGG - chr6_3:79186045-79186064 None:intergenic 50.0%
CAACTCAGCCACCTCACTAA+AGG - chr6_3:79186047-79186066 None:intergenic 50.0%
TGGAGCAACAGGTTCAGGAT+CGG - chr6_3:79186209-79186228 None:intergenic 50.0%
ACTGTTGGAGCAACAGGTTC+AGG - chr6_3:79186214-79186233 None:intergenic 50.0%
TGAGGAACTGTTGGAGCAAC+AGG - chr6_3:79186220-79186239 None:intergenic 50.0%
TGTTGGGCTTGAGGAACTGT+TGG - chr6_3:79186229-79186248 None:intergenic 50.0%
ACACTGGATTGTTGGGCTTG+AGG - chr6_3:79186238-79186257 None:intergenic 50.0%
GTTGAGGCACACTGGATTGT+TGG - chr6_3:79186246-79186265 None:intergenic 50.0%
! CAAAACAGGTTGAGGCACAC+TGG - chr6_3:79186254-79186273 None:intergenic 50.0%
CCTGACTGCAAAACAGGTTG+AGG - chr6_3:79186262-79186281 None:intergenic 50.0%
! CCTCAACCTGTTTTGCAGTC+AGG + chr6_3:79186259-79186278 Msa0960150:CDS 50.0%
TGTGTATCACCTTGGACTCC+TGG - chr6_3:79186421-79186440 None:intergenic 50.0%
TTTACAGCACCACCCACTGA+CGG - chr6_3:79186666-79186685 None:intergenic 50.0%
!! GGGTGGTGCTGTAAATAGTC+AGG + chr6_3:79186671-79186690 Msa0960150:CDS 50.0%
! GGTACAGAAGGTGCATGCAA+TGG - chr6_3:79186801-79186820 None:intergenic 50.0%
!! GCATGTGGCATTGGTGCATT+CGG - chr6_3:79186840-79186859 None:intergenic 50.0%
GAGGCATGATGGTATGCATG+TGG - chr6_3:79186855-79186874 None:intergenic 50.0%
!! TAGCAGGCTTTGAGGCATGA+TGG - chr6_3:79186866-79186885 None:intergenic 50.0%
TGCCTCAAAGCCTGCTAATG+AGG + chr6_3:79186869-79186888 Msa0960150:CDS 50.0%
AGCCTCATTAGCAGGCTTTG+AGG - chr6_3:79186874-79186893 None:intergenic 50.0%
! GAACTGGAGCAGGAAAGTAC+TGG - chr6_3:79187083-79187102 None:intergenic 50.0%
TTCCTGCTCCAGTTCAAGGT+TGG + chr6_3:79187088-79187107 Msa0960150:CDS 50.0%
CCCATTTGCCAACCTTGAAC+TGG - chr6_3:79187099-79187118 None:intergenic 50.0%
GGCTGTGAATAACTTGGCAC+AGG - chr6_3:79187392-79187411 None:intergenic 50.0%
CCTTCCATGTCTTCCTTGCA+CGG + chr6_3:79187717-79187736 Msa0960150:CDS 50.0%
!! GGGAGTGATGGTGGTACATT+AGG - chr6_3:79187750-79187769 None:intergenic 50.0%
!! ATGAACTGCTCTGGCTTGGA+GGG - chr6_3:79187779-79187798 None:intergenic 50.0%
!! AATGAACTGCTCTGGCTTGG+AGG - chr6_3:79187780-79187799 None:intergenic 50.0%
TGCAATGAACTGCTCTGGCT+TGG - chr6_3:79187783-79187802 None:intergenic 50.0%
TGAAGACTGCACGGTTCCTA+CGG - chr6_3:79187829-79187848 None:intergenic 50.0%
!! TGCATGTGGTGGATAACCCA+GGG - chr6_3:79187853-79187872 None:intergenic 50.0%
!! ATGCATGTGGTGGATAACCC+AGG - chr6_3:79187854-79187873 None:intergenic 50.0%
TGGGTTATCCACCACATGCA+TGG + chr6_3:79187853-79187872 Msa0960150:CDS 50.0%
GAACCTTGAAAGGATGGCAG+GGG - chr6_3:79187885-79187904 None:intergenic 50.0%
GGAACCTTGAAAGGATGGCA+GGG - chr6_3:79187886-79187905 None:intergenic 50.0%
CTGAAGGTGGTACATTAGGC+AGG - chr6_3:79187908-79187927 None:intergenic 50.0%
CTGCCTAATGTACCACCTTC+AGG + chr6_3:79187906-79187925 Msa0960150:CDS 50.0%
! ATGGATTGCCTAGGTTCGGA+GGG - chr6_3:79187941-79187960 None:intergenic 50.0%
!! TGGGATGGATTGCCTAGGTT+CGG - chr6_3:79187945-79187964 None:intergenic 50.0%
! GCATATGATGACGATGGGGT+TGG - chr6_3:79187978-79187997 None:intergenic 50.0%
TCATATGCATCAGTCCCACC+AGG + chr6_3:79187990-79188009 Msa0960150:CDS 50.0%
TCAATGTGCAGGCAAGGAGT+TGG + chr6_3:79188457-79188476 Msa0960150:intron 50.0%
CAATGTGCAGGCAAGGAGTT+GGG + chr6_3:79188458-79188477 Msa0960150:intron 50.0%
! CTATCAGGCAGCTGCTGATT+TGG - chr6_3:79188523-79188542 None:intergenic 50.0%
CAAATCAGCAGCTGCCTGAT+AGG + chr6_3:79188521-79188540 Msa0960150:CDS 50.0%
! CGAATGGATTCCCTCCTTTG+GGG - chr6_3:79188576-79188595 None:intergenic 50.0%
! CCGAATGGATTCCCTCCTTT+GGG - chr6_3:79188577-79188596 None:intergenic 50.0%
CCCAAAGGAGGGAATCCATT+CGG + chr6_3:79188574-79188593 Msa0960150:CDS 50.0%
CCAAAGGAGGGAATCCATTC+GGG + chr6_3:79188575-79188594 Msa0960150:CDS 50.0%
! GATTTGTGATGACCGGCTCT+GGG + chr6_3:79188720-79188739 Msa0960150:three_prime_UTR 50.0%
! TTTTCACTTCGACCCAGAGC+CGG - chr6_3:79188735-79188754 None:intergenic 50.0%
CATGACACCTGTCAGACACC+AGG - chr6_3:79180992-79181011 None:intergenic 55.0%
TCTTACGAGCGTGCGATTCG+AGG + chr6_3:79181291-79181310 Msa0960150:intron 55.0%
GTGGGCAACTTGGGGCTTAT+CGG + chr6_3:79183349-79183368 Msa0960150:intron 55.0%
GAGAATGGTGCAACAGGTGC+TGG - chr6_3:79183753-79183772 None:intergenic 55.0%
ACCTCTGACAAACCACCGAG+AGG + chr6_3:79184872-79184891 Msa0960150:CDS 55.0%
! TCCTCTCGGTGGTTTGTCAG+AGG - chr6_3:79184876-79184895 None:intergenic 55.0%
CTTACGACCTTTCCTCTCGG+TGG - chr6_3:79184887-79184906 None:intergenic 55.0%
CCCTCCATACGAAGACACAC+AGG + chr6_3:79185124-79185143 Msa0960150:CDS 55.0%
AGTCCAGGTGGAAGAAGTCC+TGG + chr6_3:79185170-79185189 Msa0960150:CDS 55.0%
TTGACAACTGGAGGACGACC+GGG - chr6_3:79185239-79185258 None:intergenic 55.0%
TCTCTAACAGGTCGGACCAC+GGG - chr6_3:79185359-79185378 None:intergenic 55.0%
GGGGGTCCACTTATCCTAAG+AGG - chr6_3:79185404-79185423 None:intergenic 55.0%
! TCGGCAGCTTTTCCGCTGTT+TGG - chr6_3:79185431-79185450 None:intergenic 55.0%
CATCTCCCCCTTTAGTGAGG+TGG + chr6_3:79186036-79186055 Msa0960150:intron 55.0%
CTCAGCCACCTCACTAAAGG+GGG - chr6_3:79186044-79186063 None:intergenic 55.0%
AACTGCATCCTCTGGCAGCT+TGG + chr6_3:79186117-79186136 Msa0960150:CDS 55.0%
ACTGGATACCAAGCTGCCAG+AGG - chr6_3:79186128-79186147 None:intergenic 55.0%
TGGACTCCTGGAGCATGAGA+AGG - chr6_3:79186409-79186428 None:intergenic 55.0%
TCTCATGCTCCAGGAGTCCA+AGG + chr6_3:79186409-79186428 Msa0960150:CDS 55.0%
CTAGGAGCTGCTGCTGGAAT+AGG - chr6_3:79186507-79186526 None:intergenic 55.0%
CCAAAACTAGGAGCTGCTGC+TGG - chr6_3:79186513-79186532 None:intergenic 55.0%
! CCAGCAGCAGCTCCTAGTTT+TGG + chr6_3:79186510-79186529 Msa0960150:CDS 55.0%
TTCTCAGCTTTCCCACCCAG+TGG + chr6_3:79186537-79186556 Msa0960150:CDS 55.0%
! GATGGCACTGAAGTGCCACT+GGG - chr6_3:79186555-79186574 None:intergenic 55.0%
TGGTTGCGGATGCTGCAAAC+TGG - chr6_3:79186610-79186629 None:intergenic 55.0%
! GAAGCAGGGAACGTTGGTTG+CGG - chr6_3:79186624-79186643 None:intergenic 55.0%
CTAGCAGAAGCAGGGAACGT+TGG - chr6_3:79186630-79186649 None:intergenic 55.0%
CAATTTCCACCGTCAGTGGG+TGG + chr6_3:79186654-79186673 Msa0960150:CDS 55.0%
CATGCACCTTCTGTACCCAC+AGG + chr6_3:79186804-79186823 Msa0960150:CDS 55.0%
ACCTTCTGTACCCACAGGAC+AGG + chr6_3:79186809-79186828 Msa0960150:CDS 55.0%
CCTTCTGTACCCACAGGACA+GGG + chr6_3:79186810-79186829 Msa0960150:CDS 55.0%
CTTCTGTACCCACAGGACAG+GGG + chr6_3:79186811-79186830 Msa0960150:CDS 55.0%
TGCCAACCTTGAACTGGAGC+AGG - chr6_3:79187093-79187112 None:intergenic 55.0%
CCGTGCAAGGAAGACATGGA+AGG - chr6_3:79187720-79187739 None:intergenic 55.0%
ATTAGGCAACGCACCGTGCA+AGG - chr6_3:79187733-79187752 None:intergenic 55.0%
!! TCTGGCTTGGAGGGTGCATT+GGG - chr6_3:79187770-79187789 None:intergenic 55.0%
AATCCACCACTGCCTACCGT+AGG + chr6_3:79187810-79187829 Msa0960150:CDS 55.0%
AACCGTGCAGTCTTCAACCC+TGG + chr6_3:79187833-79187852 Msa0960150:CDS 55.0%
ACCGTGCAGTCTTCAACCCT+GGG + chr6_3:79187834-79187853 Msa0960150:CDS 55.0%
ACCCAGGGTTGAAGACTGCA+CGG - chr6_3:79187838-79187857 None:intergenic 55.0%
GGGAACCTTGAAAGGATGGC+AGG - chr6_3:79187887-79187906 None:intergenic 55.0%
GGCAGGGAACCTTGAAAGGA+TGG - chr6_3:79187891-79187910 None:intergenic 55.0%
ATTACGCACCCTCCGAACCT+AGG + chr6_3:79187930-79187949 Msa0960150:CDS 55.0%
!! GATGGATTGCCTAGGTTCGG+AGG - chr6_3:79187942-79187961 None:intergenic 55.0%
!! AGGCATGGGATGGATTGCCT+AGG - chr6_3:79187950-79187969 None:intergenic 55.0%
TAGGCAATCCATCCCATGCC+TGG + chr6_3:79187949-79187968 Msa0960150:CDS 55.0%
GTCATACGCTGGGCAGCAAA+TGG + chr6_3:79188105-79188124 Msa0960150:CDS 55.0%
TTAGAGCTGGGAGTGGTTCC+CGG - chr6_3:79188547-79188566 None:intergenic 55.0%
TTGGGGAAGGGGTTAGAGCT+GGG - chr6_3:79188559-79188578 None:intergenic 55.0%
TTTGGGGAAGGGGTTAGAGC+TGG - chr6_3:79188560-79188579 None:intergenic 55.0%
! AGCTCTAACCCCTTCCCCAA+AGG + chr6_3:79188559-79188578 Msa0960150:CDS 55.0%
TCTAACCCCTTCCCCAAAGG+AGG + chr6_3:79188562-79188581 Msa0960150:CDS 55.0%
CTAACCCCTTCCCCAAAGGA+GGG + chr6_3:79188563-79188582 Msa0960150:CDS 55.0%
! GATTCCCTCCTTTGGGGAAG+GGG - chr6_3:79188570-79188589 None:intergenic 55.0%
! GGATTCCCTCCTTTGGGGAA+GGG - chr6_3:79188571-79188590 None:intergenic 55.0%
! TGGATTCCCTCCTTTGGGGA+AGG - chr6_3:79188572-79188591 None:intergenic 55.0%
! CCCGAATGGATTCCCTCCTT+TGG - chr6_3:79188578-79188597 None:intergenic 55.0%
! GGATTTGTGATGACCGGCTC+TGG + chr6_3:79188719-79188738 Msa0960150:three_prime_UTR 55.0%
GGTGCATCCTGGTGTCTGAC+AGG + chr6_3:79180982-79181001 Msa0960150:intron 60.0%
GGTGACAGGTCTAGTCCAGG+TGG + chr6_3:79185158-79185177 Msa0960150:CDS 60.0%
TCCCGAACGAGCTAGAGACC+TGG + chr6_3:79185319-79185338 Msa0960150:CDS 60.0%
! CCCAGGTCTCTAGCTCGTTC+GGG - chr6_3:79185323-79185342 None:intergenic 60.0%
CCCGAACGAGCTAGAGACCT+GGG + chr6_3:79185320-79185339 Msa0960150:CDS 60.0%
! GCCCAGGTCTCTAGCTCGTT+CGG - chr6_3:79185324-79185343 None:intergenic 60.0%
TAACAGGTCGGACCACGGGT+GGG - chr6_3:79185355-79185374 None:intergenic 60.0%
GGACCCCCCAAACCAAACAG+CGG + chr6_3:79185416-79185435 Msa0960150:CDS 60.0%
! GCACTGAAGTGCCACTGGGT+GGG - chr6_3:79186551-79186570 None:intergenic 60.0%
! GGATGGCACTGAAGTGCCAC+TGG - chr6_3:79186556-79186575 None:intergenic 60.0%
CCCTGTCCTGTGGGTACAGA+AGG - chr6_3:79186813-79186832 None:intergenic 60.0%
TTCGGATGCCCCTGTCCTGT+GGG - chr6_3:79186822-79186841 None:intergenic 60.0%
ATTCGGATGCCCCTGTCCTG+TGG - chr6_3:79186823-79186842 None:intergenic 60.0%
TTGGCAAATGGGTCCTCCGC+AGG + chr6_3:79187107-79187126 Msa0960150:CDS 60.0%
TGGCAAATGGGTCCTCCGCA+GGG + chr6_3:79187108-79187127 Msa0960150:CDS 60.0%
TGCATTGGAAAGCCCTGCGG+AGG - chr6_3:79187123-79187142 None:intergenic 60.0%
CGCACCGTGCAAGGAAGACA+TGG - chr6_3:79187724-79187743 None:intergenic 60.0%
GGGTGCATTGGGAGTGATGG+TGG - chr6_3:79187759-79187778 None:intergenic 60.0%
! GGAGGGTGCATTGGGAGTGA+TGG - chr6_3:79187762-79187781 None:intergenic 60.0%
!! CTCTGGCTTGGAGGGTGCAT+TGG - chr6_3:79187771-79187790 None:intergenic 60.0%
GTTCCTACGGTAGGCAGTGG+TGG - chr6_3:79187816-79187835 None:intergenic 60.0%
ACGGTTCCTACGGTAGGCAG+TGG - chr6_3:79187819-79187838 None:intergenic 60.0%
GACTGCACGGTTCCTACGGT+AGG - chr6_3:79187825-79187844 None:intergenic 60.0%
GGTGGAGTCCATGCATGTGG+TGG - chr6_3:79187864-79187883 None:intergenic 60.0%
AGGGGTGGAGTCCATGCATG+TGG - chr6_3:79187867-79187886 None:intergenic 60.0%
CCTTGAAAGGATGGCAGGGG+TGG - chr6_3:79187882-79187901 None:intergenic 60.0%
CCACCCCTGCCATCCTTTCA+AGG + chr6_3:79187879-79187898 Msa0960150:CDS 60.0%
GGGTGCGTAATGCCTGAAGG+TGG - chr6_3:79187921-79187940 None:intergenic 60.0%
! GGAGGGTGCGTAATGCCTGA+AGG - chr6_3:79187924-79187943 None:intergenic 60.0%
GTTGGAGTCCAGGCATGGGA+TGG - chr6_3:79187960-79187979 None:intergenic 60.0%
TGGGGTTGGAGTCCAGGCAT+GGG - chr6_3:79187964-79187983 None:intergenic 60.0%
ATGGGGTTGGAGTCCAGGCA+TGG - chr6_3:79187965-79187984 None:intergenic 60.0%
TGACGATGGGGTTGGAGTCC+AGG - chr6_3:79187970-79187989 None:intergenic 60.0%
TCAGCAGCTGCCTGATAGGC+CGG + chr6_3:79188525-79188544 Msa0960150:CDS 60.0%
GAAGGGGTTAGAGCTGGGAG+TGG - chr6_3:79188554-79188573 None:intergenic 60.0%
CTAACAGGTCGGACCACGGG+TGG - chr6_3:79185356-79185375 None:intergenic 65.0%
! GGCACTGAAGTGCCACTGGG+TGG - chr6_3:79186552-79186571 None:intergenic 65.0%
ACAGCACCACCCACTGACGG+TGG - chr6_3:79186663-79186682 None:intergenic 65.0%
CAGCAGCTGCCTGATAGGCC+GGG + chr6_3:79188526-79188545 Msa0960150:CDS 65.0%
GGAGTGGTTCCCGGCCTATC+AGG - chr6_3:79188538-79188557 None:intergenic 65.0%
! CGGGTGGGCTTGAAGAGCCC+AGG - chr6_3:79185340-79185359 None:intergenic 70.0%
GGGCTCTTCAAGCCCACCCG+TGG + chr6_3:79185340-79185359 Msa0960150:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 79180286 79189106 79180286 ID=Msa0960150;Name=Msa0960150
chr6_3 mRNA 79180286 79189106 79180286 ID=Msa0960150-mRNA-1;Parent=Msa0960150;Name=Msa0960150-mRNA-1;_AED=0.05;_eAED=0.05;_QI=267|0.92|0.93|1|0.78|0.66|15|506|715
chr6_3 exon 79180286 79180448 79180286 ID=Msa0960150-mRNA-1:exon:14036;Parent=Msa0960150-mRNA-1
chr6_3 exon 79180601 79180803 79180601 ID=Msa0960150-mRNA-1:exon:14037;Parent=Msa0960150-mRNA-1
chr6_3 exon 79183908 79183969 79183908 ID=Msa0960150-mRNA-1:exon:14038;Parent=Msa0960150-mRNA-1
chr6_3 exon 79184473 79184560 79184473 ID=Msa0960150-mRNA-1:exon:14039;Parent=Msa0960150-mRNA-1
chr6_3 exon 79184663 79184724 79184663 ID=Msa0960150-mRNA-1:exon:14040;Parent=Msa0960150-mRNA-1
chr6_3 exon 79184805 79184901 79184805 ID=Msa0960150-mRNA-1:exon:14041;Parent=Msa0960150-mRNA-1
chr6_3 exon 79185062 79185469 79185062 ID=Msa0960150-mRNA-1:exon:14042;Parent=Msa0960150-mRNA-1
chr6_3 exon 79186115 79186430 79186115 ID=Msa0960150-mRNA-1:exon:14043;Parent=Msa0960150-mRNA-1
chr6_3 exon 79186502 79186692 79186502 ID=Msa0960150-mRNA-1:exon:14044;Parent=Msa0960150-mRNA-1
chr6_3 exon 79186798 79186962 79186798 ID=Msa0960150-mRNA-1:exon:14045;Parent=Msa0960150-mRNA-1
chr6_3 exon 79187060 79187158 79187060 ID=Msa0960150-mRNA-1:exon:14046;Parent=Msa0960150-mRNA-1
chr6_3 exon 79187389 79187472 79187389 ID=Msa0960150-mRNA-1:exon:14047;Parent=Msa0960150-mRNA-1
chr6_3 exon 79187714 79188011 79187714 ID=Msa0960150-mRNA-1:exon:14048;Parent=Msa0960150-mRNA-1
chr6_3 exon 79188104 79188149 79188104 ID=Msa0960150-mRNA-1:exon:14049;Parent=Msa0960150-mRNA-1
chr6_3 exon 79188468 79189106 79188468 ID=Msa0960150-mRNA-1:exon:14050;Parent=Msa0960150-mRNA-1
chr6_3 five_prime_UTR 79180286 79180448 79180286 ID=Msa0960150-mRNA-1:five_prime_utr;Parent=Msa0960150-mRNA-1
chr6_3 five_prime_UTR 79180601 79180704 79180601 ID=Msa0960150-mRNA-1:five_prime_utr;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79180705 79180803 79180705 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79183908 79183969 79183908 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79184473 79184560 79184473 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79184663 79184724 79184663 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79184805 79184901 79184805 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79185062 79185469 79185062 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79186115 79186430 79186115 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79186502 79186692 79186502 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79186798 79186962 79186798 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79187060 79187158 79187060 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79187389 79187472 79187389 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79187714 79188011 79187714 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79188104 79188149 79188104 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 CDS 79188468 79188600 79188468 ID=Msa0960150-mRNA-1:cds;Parent=Msa0960150-mRNA-1
chr6_3 three_prime_UTR 79188601 79189106 79188601 ID=Msa0960150-mRNA-1:three_prime_utr;Parent=Msa0960150-mRNA-1
Gene Sequence

>Msa0960150

ATGGGGACTCGGTTTAAAGAAGATGAGAGAAACGAACGCGCGATTCGAACTCTTTTAAAGCTTGAACCAAATCGGAGATGTATTAACTGTAATAGTTTGGGACCACAATATGTGTGCACAAATTTCTGGACTTTTGTTTGCACTAATTGTAGTGGAATACACCGTGAATTTACACATCGTGTGAAATCAGTTTCAATGGCTAAATTTGCTTCGCAAGAAGTTACCGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAGATTTATTTTAAAGAATGGGATGCACAACGCAATTCTTTCCCTGACAGCAGTAATGTTAACAGGCTCCGAGAGTTTGTTAAGCATGTTTATGAGGATAGGAGATTCACTGGAGATAGGACCTCTGACAAACCACCGAGAGGAAAGGTCGGTGACAAAGACGATTCCTATGAAAACAGGAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCTCCATACGAAGACACACAGGAACGTCGTTATGGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGCGATTATAAGAGAAGTCCCGGTCGTCCTCCAGTTGTCAATGATTGGCGTCGTGAAGACCGTAGAGTATCAGATGGAGATTATAAGGTGGAAAGTCAATCTCCCGAACGAGCTAGAGACCTGGGCTCTTCAAGCCCACCCGTGGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTAATACCTCTTAGGATAAGTGGACCCCCCAAACCAAACAGCGGAAAAGCTGCCGATGCTTCATCACTGACACAGAGAACTGCATCCTCTGGCAGCTTGGTATCCAGTAACGAAAGCCAAGTAGAGATTAAATTTGAGACTACTAAGAGCCTTATTGATTTTGATGCCGATCCTGAACCTGTTGCTCCAACAGTTCCTCAAGCCCAACAATCCAGTGTGCCTCAACCTGTTTTGCAGTCAGGAAATCCCAGTGATGACAATTGGGCTTCTTTTGATGTTGCTTCTGAGGCAAAAGCAAATCCAAGCACCTCAAATTTAAATCCGCTTGAATCTGTTTTGTCCCAATTGTCCGTGTCGGAATCTTTACCTTCTCATGCTCCAGGAGTCCAAGGACCTATTCCAGCAGCAGCTCCTAGTTTTGGCAATTTCTCAGCTTTCCCACCCAGTGGCACTTCAGTGCCATCCGTATCACCTCATAATAATGTAGGACAATGGGCCAGTTTGCAGCATCCGCAACCAACGTTCCCTGCTTCTGCTAGTCAACAATTTCCACCGTCAGTGGGTGGTGCTGTAAATAGTCAGCCATTGCATGCACCTTCTGTACCCACAGGACAGGGGCATCCGAATGCACCAATGCCACATGCATACCATCATGCCTCAAAGCCTGCTAATGAGGCTTTTAACAGTGTTGTTTCTCAACCTTCTGCTGTAGAAGTTAAACCAAGTGGAAGAACAGAACTTCCTGAAGATCTGTTCACTGTAAAACACCAGTACTTTCCTGCTCCAGTTCAAGGTTGGCAAATGGGTCCTCCGCAGGGCTTTCCAATGCAATATAATAATGTGGCGCCTGTGCCAAGTTATTCACAGCCGTCAAGGTCAACAAATCCATTCGATGTCAGCAGTAAACAAACCCCAAATCAAGCCCCAAGTTTTCCTTCCATGTCTTCCTTGCACGGTGCGTTGCCTAATGTACCACCATCACTCCCAATGCACCCTCCAAGCCAGAGCAGTTCATTGCATGCATGGAATCCACCACTGCCTACCGTAGGAACCGTGCAGTCTTCAACCCTGGGTTATCCACCACATGCATGGACTCCACCCCTGCCATCCTTTCAAGGTTCCCTGCCTAATGTACCACCTTCAGGCATTACGCACCCTCCGAACCTAGGCAATCCATCCCATGCCTGGACTCCAACCCCATCGTCATCATATGCATCAGTCCCACCAGGGTCATACGCTGGGCAGCAAATGGCAACTAATATACCAATGCCAAGGCAAGGAGTTGGGAATTTCGGAACTGAGGGAAACATGTTCGGCTTGTCAAATCCAAATCAGCAGCTGCCTGATAGGCCGGGAACCACTCCCAGCTCTAACCCCTTCCCCAAAGGAGGGAATCCATTCGGGTAA
Protein sequence

>Msa0960150

MGTRFKEDERNERAIRTLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFASQEVTALQEGGNQRAKEIYFKEWDAQRNSFPDSSNVNRLREFVKHVYEDRRFTGDRTSDKPPRGKVGDKDDSYENRRVEAYQGGSKSPPYEDTQERRYGDRSSPGGRSPGYDQESRQYGDYKRSPGRPPVVNDWRREDRRVSDGDYKVESQSPERARDLGSSSPPVVRPVRDILGENVIPLRISGPPKPNSGKAADASSLTQRTASSGSLVSSNESQVEIKFETTKSLIDFDADPEPVAPTVPQAQQSSVPQPVLQSGNPSDDNWASFDVASEAKANPSTSNLNPLESVLSQLSVSESLPSHAPGVQGPIPAAAPSFGNFSAFPPSGTSVPSVSPHNNVGQWASLQHPQPTFPASASQQFPPSVGGAVNSQPLHAPSVPTGQGHPNAPMPHAYHHASKPANEAFNSVVSQPSAVEVKPSGRTELPEDLFTVKHQYFPAPVQGWQMGPPQGFPMQYNNVAPVPSYSQPSRSTNPFDVSSKQTPNQAPSFPSMSSLHGALPNVPPSLPMHPPSQSSSLHAWNPPLPTVGTVQSSTLGYPPHAWTPPLPSFQGSLPNVPPSGITHPPNLGNPSHAWTPTPSSSYASVPPGSYAGQQMATNIPMPRQGVGNFGTEGNMFGLSNPNQQLPDRPGTTPSSNPFPKGGNPFG*