AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0928520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928520 MtrunA17_Chr6g0486611 99.762 421 1 0 1 421 1 421 0.0 875
Msa0928520 MtrunA17_Chr8g0390211 80.476 420 79 3 1 419 1 418 0.0 699
Msa0928520 MtrunA17_Chr4g0071031 72.973 333 89 1 1 333 1 332 0.0 519
Msa0928520 MtrunA17_Chr3g0140071 64.286 406 135 4 1 398 1 404 0.0 517
Msa0928520 MtrunA17_Chr2g0329981 63.246 419 138 7 1 411 1 411 0.0 516
Msa0928520 MtrunA17_Chr1g0166821 75.625 320 75 2 1 317 2 321 0.0 516
Msa0928520 MtrunA17_Chr1g0183631 76.299 308 73 0 1 308 1 308 1.21e-176 504
Msa0928520 MtrunA17_Chr8g0342821 59.333 450 159 9 1 440 1 436 1.69e-176 504
Msa0928520 MtrunA17_Chr1g0187571 72.812 320 84 2 1 317 2 321 1.53e-174 499
Msa0928520 MtrunA17_Chr1g0146151 70.948 327 94 1 1 327 1 326 5.59e-174 496
Msa0928520 MtrunA17_Chr7g0261501 76.094 297 71 0 1 297 1 297 3.67e-172 493
Msa0928520 MtrunA17_Chr2g0299661 73.579 299 79 0 1 299 1 299 6.34e-169 485
Msa0928520 MtrunA17_Chr1g0167261 69.000 300 91 1 1 298 2 301 3.47e-152 438
Msa0928520 MtrunA17_Chr7g0214531 36.268 284 164 5 9 278 37 317 2.57e-54 192
Msa0928520 MtrunA17_Chr1g0213321 37.818 275 157 6 9 273 119 389 8.58e-53 189
Msa0928520 MtrunA17_Chr1g0146301 36.996 273 161 5 9 273 124 393 6.94e-52 187
Msa0928520 MtrunA17_Chr7g0253211 36.879 282 160 6 9 276 324 601 5.20e-51 186
Msa0928520 MtrunA17_Chr3g0140431 36.264 273 163 5 9 273 38 307 5.57e-51 183
Msa0928520 MtrunA17_Chr8g0340491 34.043 282 164 6 9 273 128 404 3.35e-46 171
Msa0928520 MtrunA17_Chr7g0245031 26.050 238 158 5 3 236 142 365 6.73e-13 70.9
Msa0928520 MtrunA17_Chr5g0428981 25.000 288 151 9 2 249 756 1018 2.37e-12 69.7
Msa0928520 MtrunA17_Chr4g0018201 25.091 275 147 8 2 236 752 1007 2.80e-12 69.7
Msa0928520 MtrunA17_Chr8g0387671 31.132 212 128 8 9 213 66 266 3.70e-12 68.6
Msa0928520 MtrunA17_Chr1g0205931 26.818 220 134 8 8 213 54 260 1.92e-11 66.6
Msa0928520 MtrunA17_Chr7g0272841 26.364 220 135 7 8 213 67 273 2.46e-11 66.2
Msa0928520 MtrunA17_Chr5g0397101 29.384 211 133 6 9 213 67 267 2.77e-11 65.9
Msa0928520 MtrunA17_Chr4g0075541 29.412 170 103 4 100 269 185 337 3.08e-11 65.1
Msa0928520 MtrunA17_Chr4g0059951 30.968 155 100 4 5 153 69 222 3.42e-11 65.5
Msa0928520 MtrunA17_Chr6g0455651 27.652 264 164 9 15 267 122 369 5.70e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928520 AT4G28880.3 71.395 423 103 6 1 416 1 412 0.0 615
Msa0928520 AT4G28880.2 71.395 423 103 6 1 416 1 412 0.0 615
Msa0928520 AT4G28880.1 71.395 423 103 6 1 416 1 412 0.0 615
Msa0928520 AT4G28880.4 71.395 423 103 6 1 416 1 412 0.0 615
Msa0928520 AT4G28860.1 71.801 422 102 7 1 416 1 411 0.0 605
Msa0928520 AT4G28860.2 79.339 363 68 3 1 358 1 361 0.0 600
Msa0928520 AT4G26100.1 72.000 325 90 1 1 325 1 324 2.00e-177 506
Msa0928520 AT5G57015.1 65.574 366 120 3 1 363 1 363 1.01e-175 501
Msa0928520 AT1G72710.1 69.275 345 103 3 1 345 1 342 7.92e-175 500
Msa0928520 AT2G19470.1 68.343 338 97 3 1 329 1 337 5.57e-174 497
Msa0928520 AT1G03930.1 75.084 297 74 0 1 297 1 297 2.01e-172 494
Msa0928520 AT4G28540.1 75.503 298 73 0 1 298 5 302 2.53e-172 494
Msa0928520 AT5G44100.1 69.394 330 90 1 1 319 1 330 8.73e-172 493
Msa0928520 AT5G44100.2 69.394 330 90 1 1 319 1 330 8.73e-172 493
Msa0928520 AT3G23340.1 66.572 353 111 3 1 346 1 353 1.72e-171 491
Msa0928520 AT5G43320.1 57.666 437 155 8 1 414 1 430 7.67e-168 483
Msa0928520 AT4G14340.1 71.474 312 88 1 1 312 7 317 5.09e-167 480
Msa0928520 AT1G04440.1 55.730 445 157 7 1 413 1 437 8.83e-167 480
Msa0928520 AT4G14340.2 71.474 312 88 1 1 312 7 317 1.10e-166 476
Msa0928520 AT5G43320.2 73.737 297 78 0 1 297 1 297 5.41e-166 474
Msa0928520 AT5G43320.3 73.737 297 78 0 1 297 1 297 5.41e-166 474
Msa0928520 AT3G23340.2 63.456 353 108 4 1 346 1 339 1.26e-158 457
Msa0928520 AT4G08800.1 62.585 294 78 2 1 294 1 262 3.30e-133 387
Msa0928520 AT2G25760.2 38.214 280 158 4 9 273 107 386 2.29e-55 197
Msa0928520 AT3G03940.1 37.809 283 158 6 9 277 140 418 1.36e-53 192
Msa0928520 AT2G25760.1 37.857 280 156 5 9 273 107 383 3.06e-53 191
Msa0928520 AT5G18190.2 36.842 285 162 6 9 279 130 410 1.89e-52 189
Msa0928520 AT5G18190.1 36.842 285 162 6 9 279 130 410 1.89e-52 189
Msa0928520 AT3G13670.1 35.211 284 167 5 9 278 137 417 6.32e-52 187
Msa0928520 AT3G23000.1 30.303 231 140 9 3 224 19 237 2.08e-12 69.3
Msa0928520 AT1G54960.1 27.064 218 136 7 8 213 67 273 4.63e-12 68.9
Msa0928520 AT1G54960.2 27.064 218 136 7 8 213 67 273 4.63e-12 68.9
Msa0928520 AT3G06030.1 26.147 218 138 7 8 213 67 273 1.29e-11 67.4
Msa0928520 AT3G08720.1 24.370 238 160 6 4 236 134 356 1.60e-11 67.0
Msa0928520 AT3G08720.3 24.370 238 160 6 4 236 134 356 1.60e-11 67.0
Msa0928520 AT3G08720.4 24.370 238 160 6 4 236 134 356 1.60e-11 67.0
Msa0928520 AT3G08720.2 24.370 238 160 6 4 236 134 356 1.60e-11 67.0
Msa0928520 AT3G08730.1 23.790 248 169 6 4 246 128 360 2.20e-11 66.6
Msa0928520 AT3G08730.2 23.790 248 169 6 4 246 128 360 2.20e-11 66.6
Msa0928520 AT2G41860.1 27.907 215 139 6 5 213 50 254 2.31e-11 66.6
Msa0928520 AT2G46700.1 26.267 217 142 4 6 213 140 347 2.54e-11 66.6
Msa0928520 AT3G50530.1 27.064 218 139 7 6 213 145 352 2.99e-11 66.2
Msa0928520 AT1G09000.2 27.189 217 135 7 9 213 69 274 3.55e-11 66.2
Msa0928520 AT2G41860.2 27.907 215 139 6 5 213 50 254 3.71e-11 65.9
Msa0928520 AT1G09000.1 27.189 217 135 7 9 213 69 274 4.05e-11 65.9
Msa0928520 AT3G17850.1 24.199 281 166 9 2 246 875 1144 7.27e-11 65.5
Msa0928520 AT3G20410.2 27.511 229 145 7 9 230 91 305 8.02e-11 64.7
Msa0928520 AT3G20410.1 27.511 229 145 7 9 230 91 305 8.02e-11 64.7
Msa0928520 AT3G49370.1 28.571 217 133 7 8 213 141 346 8.69e-11 64.7
Msa0928520 AT2G17890.1 25.352 213 143 5 8 213 107 310 9.96e-11 64.7

Find 161 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTATATGTAATTGATTT+TGG 0.199306 6_2:+74040800 Msa0928520:intron
ATTCTTGAGGCGCCTATTTC+GGG 0.201735 6_2:+74041641 Msa0928520:CDS
AAACATGGAGCTGCATATTA+TGG 0.224614 6_2:+74043062 Msa0928520:CDS
TGCTCCCTTGCCCATGTCTA+TGG 0.233929 6_2:-74042827 None:intergenic
GATTCTTGAGGCGCCTATTT+CGG 0.235818 6_2:+74041640 Msa0928520:CDS
TTTGATCAGCGACCTGATTA+TGG 0.244829 6_2:+74041618 Msa0928520:CDS
CAAAGACTATTGCATTTATA+TGG 0.246156 6_2:+74044171 Msa0928520:CDS
GAGCAAATAACTCCCGAAAT+AGG 0.299908 6_2:-74041653 None:intergenic
GCTTCTTTGTCGCAGCCTTT+AGG 0.310608 6_2:-74041404 None:intergenic
AGAATGCACATACTCTATTC+TGG 0.314521 6_2:-74040586 None:intergenic
ACAAAGCCGCCGGGATGATT+TGG 0.324631 6_2:+74041213 Msa0928520:CDS
TCAGACAATGCCACTTCTTC+TGG 0.327429 6_2:+74042481 Msa0928520:CDS
AATTTGATTATGTATTTGAT+TGG 0.332820 6_2:+74042152 Msa0928520:CDS
TTGGGCTTGCAAAACGATAT+CGG 0.336257 6_2:+74040819 Msa0928520:CDS
TACCGCCTGATGATTTAAAC+TGG 0.353819 6_2:-74042513 None:intergenic
TCAAAAGAGTGTGAAGTAGA+AGG 0.355419 6_2:-74042753 None:intergenic
GGAAGACAATGTGCTTGTTA+TGG 0.374985 6_2:+74040294 Msa0928520:CDS
AAGTTCCAGTTTAAATCATC+AGG 0.379006 6_2:+74042508 Msa0928520:CDS
TTTCATTCTTTAACCCATAT+AGG 0.385366 6_2:-74044237 None:intergenic
GCAAGCTGCAATACTCATCT+TGG 0.385425 6_2:+74041099 Msa0928520:CDS
TTGAAAAGGAGAAAGAATTC+AGG 0.399931 6_2:+74044369 Msa0928520:three_prime_UTR
AACATGGAGCTGCATATTAT+GGG 0.410482 6_2:+74043063 Msa0928520:CDS
GAGCAGATGCTTACCTCAAT+AGG 0.413610 6_2:-74041465 None:intergenic
GCGCGATTGTTGCTCGCTAC+AGG 0.419541 6_2:-74042313 None:intergenic
CGCCTCAAGAATCCATAATC+AGG 0.420387 6_2:-74041630 None:intergenic
TATTTGTGTTTAGTCTTCCT+TGG 0.421304 6_2:+74041376 Msa0928520:intron
TGTGCTTGTTATGGATTTGT+TGG 0.425675 6_2:+74040303 Msa0928520:CDS
TAGAAAGTTCAAAACCTGTA+TGG 0.426001 6_2:-74040866 None:intergenic
GGGCAAGGGAGCAGTAAAAT+TGG 0.426700 6_2:+74042837 Msa0928520:CDS
ATCGGTGATAAATTCAAGTT+AGG 0.432066 6_2:+74038758 Msa0928520:CDS
CCGTCAATGCGGATAATACT+AGG 0.432268 6_2:+74044595 Msa0928520:three_prime_UTR
CGGGATGATTTGGAGTCTCT+TGG 0.432361 6_2:+74041223 Msa0928520:CDS
CCTCAAAACTGTCTTGATGT+TGG 0.434362 6_2:+74040372 Msa0928520:CDS
TGGGCTTGCAAAACGATATC+GGG 0.435539 6_2:+74040820 Msa0928520:CDS
TGGGATGTGGCGATTGGTTG+TGG 0.437079 6_2:-74040846 None:intergenic
AATCTGATCAAGAAGATTCC+TGG 0.443340 6_2:+74043030 Msa0928520:CDS
GTGCTTGTTATGGATTTGTT+GGG 0.443410 6_2:+74040304 Msa0928520:CDS
CGAGTAATATCTCAGATTCA+TGG 0.446754 6_2:+74038727 Msa0928520:exon
CACCACTCCATCTTATGCTT+GGG 0.449410 6_2:-74040264 None:intergenic
TCCATGTTTGTATGCATGCC+AGG 0.454740 6_2:-74043048 None:intergenic
TTGAAGAATATTATAGAGCT+TGG 0.455654 6_2:-74039681 None:intergenic
ATAGAGTATGTGCATTCTAA+AGG 0.458276 6_2:+74040591 Msa0928520:CDS
CTTGATGTTGGCTGATCAAA+TGG 0.461622 6_2:+74040384 Msa0928520:CDS
ATTTCGGTCCTCAAGGGTTG+AGG 0.463188 6_2:-74044491 None:intergenic
AGTAGCCACCGCAATGGAAA+AGG 0.463846 6_2:-74038654 None:intergenic
TACTTACGGATATGTGAGGC+TGG 0.464438 6_2:-74042213 None:intergenic
GGTTTGCAGCTTCAGTGGAC+GGG 0.465996 6_2:-74042806 None:intergenic
TCATGAAAGATGGAAATATG+AGG 0.469388 6_2:+74044421 Msa0928520:three_prime_UTR
TCTTCCTTGGCAAAACCTAA+AGG 0.473527 6_2:+74041389 Msa0928520:CDS
ACATTCATCCGACTACTTGA+AGG 0.474841 6_2:-74042861 None:intergenic
GAATTCAACACGCGGACGGA+TGG 0.475714 6_2:-74038614 None:intergenic
CCTCCATAGGGATATAAAAC+CGG 0.477649 6_2:+74040617 Msa0928520:CDS
TTGGCTTCTGAGAATCCTCT+TGG 0.479686 6_2:+74042541 Msa0928520:CDS
ATTCTAAAGGGTTCCTCCAT+AGG 0.479961 6_2:+74040604 Msa0928520:CDS
TGCAATACTCATCTTGGGAT+TGG 0.480350 6_2:+74041105 Msa0928520:CDS
TCTGTTGTGTTGCAGGAGAC+TGG 0.481529 6_2:+74039626 Msa0928520:intron
CCTAGTATTATCCGCATTGA+CGG 0.483380 6_2:-74044595 None:intergenic
CAAGCTGCAATACTCATCTT+GGG 0.484146 6_2:+74041100 Msa0928520:CDS
AAGCTCTATAATATTCTTCA+AGG 0.485336 6_2:+74039683 Msa0928520:CDS
AGTGGACGGGGAAGGCTTCA+AGG 0.487112 6_2:-74042793 None:intergenic
CTAGTATTATCCGCATTGAC+GGG 0.487663 6_2:-74044594 None:intergenic
TCAAGAAGCACCAACCTTGT+TGG 0.492609 6_2:-74042357 None:intergenic
TAGCACATTTGTAGTCTCCA+TGG 0.492735 6_2:-74043108 None:intergenic
CTAAATCATATCTCTTCATA+CGG 0.493172 6_2:+74044296 Msa0928520:three_prime_UTR
TAAGATGGAGTGGTGTAGAC+GGG 0.495163 6_2:+74040272 Msa0928520:CDS
ACACCACTCCATCTTATGCT+TGG 0.495604 6_2:-74040265 None:intergenic
TTGTTGGTTATCAATATCCA+TGG 0.497091 6_2:-74042341 None:intergenic
TGGTTTGCAGCTTCAGTGGA+CGG 0.501913 6_2:-74042807 None:intergenic
TTGTTGCTCGCTACAGGAAC+CGG 0.502364 6_2:-74042307 None:intergenic
ATGTAGAGTAAATGACATCT+AGG 0.503049 6_2:+74044261 Msa0928520:CDS
TAGAGTATGTGCATTCTAAA+GGG 0.503360 6_2:+74040592 Msa0928520:CDS
AATTCTTATTTCGGTCCTCA+AGG 0.504557 6_2:-74044498 None:intergenic
TGCGGATAATACTAGGTCAC+CGG 0.506596 6_2:+74044602 Msa0928520:three_prime_UTR
AATGTCCACATCCATTGAAA+AGG 0.507973 6_2:+74044355 Msa0928520:three_prime_UTR
ACTTGGTCGGAAGGCAAACC+TGG 0.509382 6_2:+74040656 Msa0928520:CDS
AGGTCAAGGAATGGCAGTAA+TGG 0.510065 6_2:-74041596 None:intergenic
AAGTAGGAAGCAAACTCTAC+AGG 0.514433 6_2:-74041573 None:intergenic
AACTAAAATCTCAATGTCAC+AGG 0.515231 6_2:-74044569 None:intergenic
GAGGATCATACGTATGAAGA+AGG 0.518930 6_2:-74044472 None:intergenic
GAAAGTATCAACTCCTATTG+AGG 0.519371 6_2:+74041452 Msa0928520:CDS
TTAGGACGCAAGATCGGAAG+TGG 0.521534 6_2:+74038776 Msa0928520:CDS
TTCTAAAGGGTTCCTCCATA+GGG 0.522924 6_2:+74040605 Msa0928520:CDS
CATGAAAGATGGAAATATGA+GGG 0.523975 6_2:+74044422 Msa0928520:three_prime_UTR
AAGATCGGAAGTGGATCCTT+CGG 0.526716 6_2:+74038785 Msa0928520:CDS
AGAAAGTTCAAAACCTGTAT+GGG 0.527700 6_2:-74040865 None:intergenic
CGGGAGTTATTTGCTCGAGA+AGG 0.530876 6_2:+74041660 Msa0928520:CDS
GTGGTATCCCAAGCATAAGA+TGG 0.531050 6_2:+74040257 Msa0928520:CDS
TCAACACGCGGACGGATGGA+CGG 0.532198 6_2:-74038610 None:intergenic
ATGGTGGAGATCATGAAAGA+TGG 0.532717 6_2:+74044411 Msa0928520:three_prime_UTR
CAAAAGAGTGTGAAGTAGAA+GGG 0.533732 6_2:-74042752 None:intergenic
CCAATCGCCACATCCCATAC+AGG 0.535975 6_2:+74040852 Msa0928520:CDS
CAACAATCGCGCAATGCCCA+TGG 0.539155 6_2:+74042324 Msa0928520:CDS
GCAGCTTCAGTGGACGGGGA+AGG 0.539511 6_2:-74042801 None:intergenic
GATAACTTTCTCATGGGACT+TGG 0.540360 6_2:+74040639 Msa0928520:CDS
TAAATCATATCTCTTCATAC+GGG 0.541253 6_2:+74044297 Msa0928520:three_prime_UTR
ATGGATCCTCTCGTGTCATG+AGG 0.549642 6_2:+74044323 Msa0928520:three_prime_UTR
TCCTTCGGTGAAATCTATCT+CGG 0.549980 6_2:+74038800 Msa0928520:CDS
TTCAAGTTAGGACGCAAGAT+CGG 0.551617 6_2:+74038770 Msa0928520:CDS
TTCAAAACCTGTATGGGATG+TGG 0.553955 6_2:-74040859 None:intergenic
AGCACATTTGTAGTCTCCAT+GGG 0.555457 6_2:-74043107 None:intergenic
TTTGTTGGGCCCTAGTCTTG+AGG 0.561115 6_2:+74040318 Msa0928520:CDS
AAACCGGATAACTTTCTCAT+GGG 0.561522 6_2:+74040633 Msa0928520:CDS
GGAATGGCAGTAATGGAAGT+AGG 0.562052 6_2:-74041589 None:intergenic
AAATGAATTCAACACGCGGA+CGG 0.563130 6_2:-74038618 None:intergenic
GAAGAGAGTAGCCACCGCAA+TGG 0.564031 6_2:-74038660 None:intergenic
TCTCATGGGACTTGGTCGGA+AGG 0.565028 6_2:+74040647 Msa0928520:CDS
TCTATGGTTTGCAGCTTCAG+TGG 0.565590 6_2:-74042811 None:intergenic
AGATTCATGGATCGAATCAT+CGG 0.566316 6_2:+74038740 Msa0928520:exon
ATAAGATGGAGTGGTGTAGA+CGG 0.572946 6_2:+74040271 Msa0928520:CDS
ATAATCAGGTCGCTGATCAA+AGG 0.572957 6_2:-74041616 None:intergenic
AAAACCGGATAACTTTCTCA+TGG 0.575825 6_2:+74040632 Msa0928520:CDS
CGACTTACATTCTTGCCAAG+AGG 0.576982 6_2:-74042556 None:intergenic
AGTCCCATGAGAAAGTTATC+CGG 0.577140 6_2:-74040636 None:intergenic
GAACTTAACACCAGAAGAAG+TGG 0.579002 6_2:-74042491 None:intergenic
GTTTGCAGCTTCAGTGGACG+GGG 0.581631 6_2:-74042805 None:intergenic
TTGGCTTCATAAAGCAATTG+TGG 0.582787 6_2:-74039662 None:intergenic
ATTCTTATTTCGGTCCTCAA+GGG 0.584402 6_2:-74044497 None:intergenic
TGGATCCTCTCGTGTCATGA+GGG 0.590161 6_2:+74044324 Msa0928520:three_prime_UTR
ACTTTCTCATGGGACTTGGT+CGG 0.592057 6_2:+74040643 Msa0928520:CDS
ATTTGTAGAACAAAGCCGCC+GGG 0.602617 6_2:+74041204 Msa0928520:intron
CCTGTATGGGATGTGGCGAT+TGG 0.602796 6_2:-74040852 None:intergenic
AGGATCATACGTATGAAGAA+GGG 0.603612 6_2:-74044471 None:intergenic
TGTTGGTTATCAATATCCAT+GGG 0.604040 6_2:-74042340 None:intergenic
AAATTGGTCCTTCAAGTAGT+CGG 0.607497 6_2:+74042853 Msa0928520:CDS
TCCTGGCATGCATACAAACA+TGG 0.608264 6_2:+74043047 Msa0928520:CDS
GCAAACCATAGACATGGGCA+AGG 0.612790 6_2:+74042822 Msa0928520:CDS
GAGACTACAAATGTGCTACA+AGG 0.614976 6_2:+74043113 Msa0928520:CDS
AGGTCGCTGATCAAAGGTCA+AGG 0.616222 6_2:-74041610 None:intergenic
GCGGATAATACTAGGTCACC+GGG 0.617014 6_2:+74044603 Msa0928520:three_prime_UTR
ATCATATCTCTTCATACGGG+GGG 0.619166 6_2:+74044300 Msa0928520:three_prime_UTR
ATCCCAAGCATAAGATGGAG+TGG 0.620505 6_2:+74040262 Msa0928520:CDS
ACCGAGATAGATTTCACCGA+AGG 0.620573 6_2:-74038801 None:intergenic
GAAGCTGCAAACCATAGACA+TGG 0.621666 6_2:+74042816 Msa0928520:CDS
CAAGAGACTCCAAATCATCC+CGG 0.622494 6_2:-74041222 None:intergenic
GGATCATACGTATGAAGAAG+GGG 0.627513 6_2:-74044470 None:intergenic
TTCCAGTTTAAATCATCAGG+CGG 0.630569 6_2:+74042511 Msa0928520:CDS
AATCATATCTCTTCATACGG+GGG 0.631842 6_2:+74044299 Msa0928520:three_prime_UTR
ACTTACGGATATGTGAGGCT+GGG 0.634330 6_2:-74042212 None:intergenic
CTCTATAATATTCTTCAAGG+AGG 0.636528 6_2:+74039686 Msa0928520:CDS
GCTGATCAAAGGTCAAGGAA+TGG 0.636963 6_2:-74041605 None:intergenic
CCGGATGGAGTATAAGTAAG+GGG 0.641887 6_2:+74038542 None:intergenic
TATTTGTAGAACAAAGCCGC+CGG 0.642128 6_2:+74041203 Msa0928520:intron
CGTATGATCCTCAACCCTTG+AGG 0.643071 6_2:+74044483 Msa0928520:three_prime_UTR
CTTGACAGCAACGATCTCGA+AGG 0.646641 6_2:-74038950 None:intergenic
ACAAGAACTAGCACAAGACC+CGG 0.647326 6_2:-74044621 None:intergenic
TAGTATTATCCGCATTGACG+GGG 0.650990 6_2:-74044593 None:intergenic
ACATGGAGCTGCATATTATG+GGG 0.661231 6_2:+74043064 Msa0928520:CDS
AAGATGGAGTGGTGTAGACG+GGG 0.662328 6_2:+74040273 Msa0928520:CDS
AAATCATATCTCTTCATACG+GGG 0.663424 6_2:+74044298 Msa0928520:three_prime_UTR
GACCTGATTATGGATTCTTG+AGG 0.667363 6_2:+74041628 Msa0928520:CDS
AATATACTTACGGATATGTG+AGG 0.673155 6_2:-74042217 None:intergenic
AAGCTGCAAACCATAGACAT+GGG 0.682595 6_2:+74042817 Msa0928520:CDS
GCTTGCAAGTGATCTGCCCA+TGG 0.682712 6_2:+74043091 Msa0928520:CDS
CAAACCATAGACATGGGCAA+GGG 0.684149 6_2:+74042823 Msa0928520:CDS
TAGAGTAAATGACATCTAGG+TGG 0.693050 6_2:+74044264 Msa0928520:exon
CGGATGGAGTATAAGTAAGG+GGG 0.699759 6_2:+74038543 None:intergenic
GAATGCCATACCTTCCTCTG+AGG 0.704652 6_2:-74041264 None:intergenic
ATAGACCCTCATGACACGAG+AGG 0.706477 6_2:-74044329 None:intergenic
ATGGATATTGATAACCAACA+AGG 0.718739 6_2:+74042343 Msa0928520:CDS
GAGACTCCAAATCATCCCGG+CGG 0.750112 6_2:-74041219 None:intergenic
AATGAAATGAATTCAACACG+CGG 0.778440 6_2:-74038622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTAATT+TGG + chr6_2:74040553-74040572 Msa0928520:intron 0.0%
!!! TTTTTTTTTTTTTTTAATTT+GGG + chr6_2:74040554-74040573 Msa0928520:intron 0.0%
!! AAATATGAAAATTAAAGAAT+TGG - chr6_2:74038990-74039009 None:intergenic 10.0%
!!! ATTCATTAAGTATTAATTTT+GGG - chr6_2:74041033-74041052 None:intergenic 10.0%
!!! AATTCATTAAGTATTAATTT+TGG - chr6_2:74041034-74041053 None:intergenic 10.0%
!! AAAAAAATATTGATGTTAAT+TGG + chr6_2:74041985-74042004 Msa0928520:intron 10.0%
!! AAAAAATATTGATGTTAATT+GGG + chr6_2:74041986-74042005 Msa0928520:intron 10.0%
!!! TTATTATTTTTGTAGATTTT+TGG + chr6_2:74042717-74042736 Msa0928520:intron 10.0%
!!! AAAAAATTTGTTTAGCTTAT+TGG + chr6_2:74039157-74039176 Msa0928520:intron 15.0%
!! AATTTGATTATGTATTTGAT+TGG + chr6_2:74042152-74042171 Msa0928520:CDS 15.0%
!! ATAAACAACAGATTAAAATT+TGG - chr6_2:74042701-74042720 None:intergenic 15.0%
!!! TTGTAGATAATTTTCAAATA+TGG + chr6_2:74043253-74043272 Msa0928520:intron 15.0%
!!! AAAAAAAAAGTGAGTTTTAA+TGG + chr6_2:74044392-74044411 Msa0928520:three_prime_UTR 15.0%
!!! ATCAAAAACAATTCTTATTT+CGG - chr6_2:74044510-74044529 None:intergenic 15.0%
!!! AAATTTGTTGAAAGTATGTT+TGG - chr6_2:74039263-74039282 None:intergenic 20.0%
!! ATGAGTCAAACAATAAATTT+CGG - chr6_2:74039419-74039438 None:intergenic 20.0%
!! ACAACAATGAAAATAATGAA+AGG - chr6_2:74039728-74039747 None:intergenic 20.0%
!!! TTTCATTATTTTCATTGTTG+TGG + chr6_2:74039727-74039746 Msa0928520:intron 20.0%
!!! TTCATTATTTTCATTGTTGT+GGG + chr6_2:74039728-74039747 Msa0928520:intron 20.0%
!!! TCCCTAAAAATTGTATTTTT+AGG + chr6_2:74039833-74039852 Msa0928520:intron 20.0%
!!! CCCTAAAAATACAATTTTTA+GGG - chr6_2:74039837-74039856 None:intergenic 20.0%
!!! CCCTAAAAATTGTATTTTTA+GGG + chr6_2:74039834-74039853 Msa0928520:intron 20.0%
!!! TCCCTAAAAATACAATTTTT+AGG - chr6_2:74039838-74039857 None:intergenic 20.0%
!!! GATTTTTGTTTAATTAATGC+AGG + chr6_2:74040235-74040254 Msa0928520:intron 20.0%
!!! AGGTATATGTAATTGATTTT+GGG + chr6_2:74040801-74040820 Msa0928520:intron 20.0%
!! TAAAGTGAATGAATTAACAA+CGG - chr6_2:74040902-74040921 None:intergenic 20.0%
!!! TTAATTTTGGGTATTTCTAA+GGG - chr6_2:74041021-74041040 None:intergenic 20.0%
!!! ATTAATTTTGGGTATTTCTA+AGG - chr6_2:74041022-74041041 None:intergenic 20.0%
!!! TTAATGAATTTTACAACACA+GGG + chr6_2:74041044-74041063 Msa0928520:intron 20.0%
!!! TTTTTGTATGAATGATGTTT+AGG - chr6_2:74041963-74041982 None:intergenic 20.0%
!!! ATTAATATTTTCAGATGCAT+TGG - chr6_2:74042272-74042291 None:intergenic 20.0%
!! TTATACAGAACAACAAAATA+TGG - chr6_2:74042384-74042403 None:intergenic 20.0%
!!! TTGATAATATTACAAATTGC+AGG + chr6_2:74043402-74043421 Msa0928520:intron 20.0%
!! CCTAAAGTTTAAATATTAAG+AGG - chr6_2:74043782-74043801 None:intergenic 20.0%
!! CCTCTTAATATTTAAACTTT+AGG + chr6_2:74043779-74043798 Msa0928520:intron 20.0%
!!! GGTTTAAATCTTGTTATTAA+AGG + chr6_2:74043800-74043819 Msa0928520:intron 20.0%
!!! TATTAAAGGAACATTTTCAA+AGG + chr6_2:74043814-74043833 Msa0928520:intron 20.0%
!! AATGACAATACAAATTAATC+TGG - chr6_2:74043972-74043991 None:intergenic 20.0%
!!! TTAATTTGTATTGTCATTCT+TGG + chr6_2:74043974-74043993 Msa0928520:intron 20.0%
!!! TAATTTGTATTGTCATTCTT+GGG + chr6_2:74043975-74043994 Msa0928520:intron 20.0%
!!! CTCTTTTTTTCTAATCTATA+TGG + chr6_2:74044132-74044151 Msa0928520:CDS 20.0%
!!! ATTTCCTTTTTTAACCTATA+TGG + chr6_2:74044223-74044242 Msa0928520:CDS 20.0%
!!! TTTCCTTTTTTAACCTATAT+GGG + chr6_2:74044224-74044243 Msa0928520:CDS 20.0%
!!! TTTTTGATCATAATGTTTGT+TGG + chr6_2:74044522-74044541 Msa0928520:three_prime_UTR 20.0%
! ATGAGAATTTGATTGATTGA+AGG - chr6_2:74038832-74038851 None:intergenic 25.0%
! TTAGTGTATGTTTGATATCA+CGG + chr6_2:74039051-74039070 Msa0928520:intron 25.0%
!! ACTAAAACCAAAAGTATGTT+TGG - chr6_2:74039583-74039602 None:intergenic 25.0%
! TTGAAGAATATTATAGAGCT+TGG - chr6_2:74039684-74039703 None:intergenic 25.0%
! AAGCTCTATAATATTCTTCA+AGG + chr6_2:74039683-74039702 Msa0928520:CDS 25.0%
!!! TCCTCTAAAATGTCAAATAT+CGG - chr6_2:74039891-74039910 None:intergenic 25.0%
! TCATTTCTCTTGGATTAAAT+AGG + chr6_2:74039926-74039945 Msa0928520:intron 25.0%
!! TTGCTATTGTTATTGTTGTT+GGG + chr6_2:74040194-74040213 Msa0928520:intron 25.0%
! TGGGATTTAATTGAAAATGT+TGG + chr6_2:74040213-74040232 Msa0928520:intron 25.0%
!!! TTTTGTTTAATTAATGCAGG+TGG + chr6_2:74040238-74040257 Msa0928520:intron 25.0%
! AACAGTCAATTCTAAATGTA+GGG - chr6_2:74040710-74040729 None:intergenic 25.0%
!!! CAGGTATATGTAATTGATTT+TGG + chr6_2:74040800-74040819 Msa0928520:intron 25.0%
!! CTTAATGAATTTTACAACAC+AGG + chr6_2:74041043-74041062 Msa0928520:intron 25.0%
! GACTAAACACAAATATTTAG+TGG - chr6_2:74041371-74041390 None:intergenic 25.0%
! ACAATGATTAATGCTTATAC+AGG + chr6_2:74042433-74042452 Msa0928520:intron 25.0%
! CAATGATTAATGCTTATACA+GGG + chr6_2:74042434-74042453 Msa0928520:intron 25.0%
!! TTCACAAGTTTGAAACATAA+AGG - chr6_2:74042659-74042678 None:intergenic 25.0%
! TGCTAAATAAATGCTGAATA+TGG + chr6_2:74042899-74042918 Msa0928520:intron 25.0%
! TTATATTGTGCTATGTTTCT+AGG + chr6_2:74043003-74043022 Msa0928520:intron 25.0%
! TGTAAAATTAATGTGTGATG+TGG + chr6_2:74043307-74043326 Msa0928520:intron 25.0%
! TTGTGAAGAAACCATTATTT+CGG - chr6_2:74043673-74043692 None:intergenic 25.0%
!!! TCAAACATTTCTTGATTTGT+AGG + chr6_2:74043927-74043946 Msa0928520:intron 25.0%
! ATTTGCAATTAGATTTACAC+AGG - chr6_2:74044070-74044089 None:intergenic 25.0%
!!! TTTACATTTGTTTCTTTTGC+AGG + chr6_2:74044108-74044127 Msa0928520:intron 25.0%
!! TTTTCTAATCTATATGGCAA+TGG + chr6_2:74044138-74044157 Msa0928520:CDS 25.0%
! CAAAGACTATTGCATTTATA+TGG + chr6_2:74044171-74044190 Msa0928520:CDS 25.0%
! CCAAAAAGAAAAAATGTAGA+TGG - chr6_2:74044200-74044219 None:intergenic 25.0%
!!! CCATCTACATTTTTTCTTTT+TGG + chr6_2:74044197-74044216 Msa0928520:CDS 25.0%
!!! TCTACATTTTTTCTTTTTGG+AGG + chr6_2:74044200-74044219 Msa0928520:CDS 25.0%
! TAACCCATATAGGTTAAAAA+AGG - chr6_2:74044230-74044249 None:intergenic 25.0%
! TTTCATTCTTTAACCCATAT+AGG - chr6_2:74044240-74044259 None:intergenic 25.0%
! CTAAATCATATCTCTTCATA+CGG + chr6_2:74044296-74044315 Msa0928520:three_prime_UTR 25.0%
! TAAATCATATCTCTTCATAC+GGG + chr6_2:74044297-74044316 Msa0928520:three_prime_UTR 25.0%
!!! AAAAAAGTGAGTTTTAATGG+TGG + chr6_2:74044395-74044414 Msa0928520:three_prime_UTR 25.0%
AATGAAATGAATTCAACACG+CGG - chr6_2:74038625-74038644 None:intergenic 30.0%
! ATAGTTTTCCTTTTCCATTG+CGG + chr6_2:74038646-74038665 Msa0928520:five_prime_UTR 30.0%
! ATCGGTGATAAATTCAAGTT+AGG + chr6_2:74038758-74038777 Msa0928520:CDS 30.0%
GATACCAAACATACTTTCAA+TGG + chr6_2:74039129-74039148 Msa0928520:intron 30.0%
! TAAGCCATTGAAAGTATGTT+TGG - chr6_2:74039136-74039155 None:intergenic 30.0%
! TATTGGCATGTTTTGTATCA+TGG + chr6_2:74039174-74039193 Msa0928520:intron 30.0%
AAGTATGTTTGGTATCACTA+TGG - chr6_2:74039252-74039271 None:intergenic 30.0%
! TTTTGACGTGTTTATTGTTC+TGG + chr6_2:74039348-74039367 Msa0928520:intron 30.0%
! TGTGATACCAAACATACTTT+TGG + chr6_2:74039573-74039592 Msa0928520:intron 30.0%
CTCTATAATATTCTTCAAGG+AGG + chr6_2:74039686-74039705 Msa0928520:CDS 30.0%
!!! GGATATTTTAGTTTCTGTCA+AGG + chr6_2:74039855-74039874 Msa0928520:intron 30.0%
! TCCGATATTTGACATTTTAG+AGG + chr6_2:74039887-74039906 Msa0928520:intron 30.0%
! TCGACATTTTTCATTTCTCT+TGG + chr6_2:74039916-74039935 Msa0928520:intron 30.0%
AATGTTGTCAATTGCAGATT+GGG - chr6_2:74040123-74040142 None:intergenic 30.0%
!! CTTGCTATTGTTATTGTTGT+TGG + chr6_2:74040193-74040212 Msa0928520:intron 30.0%
ACTGACTAAAAAACATCACA+AGG - chr6_2:74040444-74040463 None:intergenic 30.0%
ATAGAGTATGTGCATTCTAA+AGG + chr6_2:74040591-74040610 Msa0928520:CDS 30.0%
TAGAGTATGTGCATTCTAAA+GGG + chr6_2:74040592-74040611 Msa0928520:CDS 30.0%
GAACAGTCAATTCTAAATGT+AGG - chr6_2:74040711-74040730 None:intergenic 30.0%
AGAAAGTTCAAAACCTGTAT+GGG - chr6_2:74040868-74040887 None:intergenic 30.0%
TAGAAAGTTCAAAACCTGTA+TGG - chr6_2:74040869-74040888 None:intergenic 30.0%
!! GAATTAACAACGGATTACAA+TGG - chr6_2:74040892-74040911 None:intergenic 30.0%
TTCAACATTAACATCAAACC+CGG - chr6_2:74040945-74040964 None:intergenic 30.0%
! TGCAATTTGTTTGATGTGAA+GGG - chr6_2:74041154-74041173 None:intergenic 30.0%
! TTGCAATTTGTTTGATGTGA+AGG - chr6_2:74041155-74041174 None:intergenic 30.0%
GGCATTCTTATCTAGTTATT+TGG + chr6_2:74041280-74041299 Msa0928520:intron 30.0%
ATACTTATGTTGCTCTCAAT+AGG - chr6_2:74041331-74041350 None:intergenic 30.0%
! TATTTGTGTTTAGTCTTCCT+TGG + chr6_2:74041376-74041395 Msa0928520:intron 30.0%
TTGTATGAATGATGTTTAGG+TGG - chr6_2:74041960-74041979 None:intergenic 30.0%
! AATATGAATTTTGCGTATGG+AGG - chr6_2:74042039-74042058 None:intergenic 30.0%
! CAGAATATGAATTTTGCGTA+TGG - chr6_2:74042042-74042061 None:intergenic 30.0%
GCAAAATTCATATTCTGTTG+TGG + chr6_2:74042045-74042064 Msa0928520:intron 30.0%
AATATACTTACGGATATGTG+AGG - chr6_2:74042220-74042239 None:intergenic 30.0%
CACACACACAAATATACTTA+CGG - chr6_2:74042230-74042249 None:intergenic 30.0%
ATATTTGTGTGTGTGTAGAT+TGG + chr6_2:74042235-74042254 Msa0928520:intron 30.0%
TATTTGTGTGTGTGTAGATT+GGG + chr6_2:74042236-74042255 Msa0928520:intron 30.0%
! TAATTTTGTCATATTGCAGC+CGG + chr6_2:74042288-74042307 Msa0928520:intron 30.0%
! TGTTGGTTATCAATATCCAT+GGG - chr6_2:74042343-74042362 None:intergenic 30.0%
! TTGTTGGTTATCAATATCCA+TGG - chr6_2:74042344-74042363 None:intergenic 30.0%
! ATGGATATTGATAACCAACA+AGG + chr6_2:74042343-74042362 Msa0928520:CDS 30.0%
! ATATTGATAACCAACAAGGT+TGG + chr6_2:74042347-74042366 Msa0928520:intron 30.0%
AAGTTCCAGTTTAAATCATC+AGG + chr6_2:74042508-74042527 Msa0928520:CDS 30.0%
! TGCTGAATATGGTAATTTTC+TGG + chr6_2:74042910-74042929 Msa0928520:intron 30.0%
TGAGTACTATTGTCTATGTA+TGG + chr6_2:74042956-74042975 Msa0928520:intron 30.0%
! ATTTCTTAGCTCATCTTTTG+AGG + chr6_2:74043143-74043162 Msa0928520:intron 30.0%
CTATGTCACCACTTATTATA+CGG - chr6_2:74043367-74043386 None:intergenic 30.0%
TAATAAGTGGTGACATAGTT+TGG + chr6_2:74043369-74043388 Msa0928520:intron 30.0%
TGAATCATCAATCCATGAAA+TGG + chr6_2:74043568-74043587 Msa0928520:intron 30.0%
TGAATCAGATGCAAAAGTTT+CGG + chr6_2:74043636-74043655 Msa0928520:intron 30.0%
TGTGAAGAAACCATTATTTC+GGG - chr6_2:74043672-74043691 None:intergenic 30.0%
! ACAAACATCAAAGGTAGTTT+TGG + chr6_2:74043689-74043708 Msa0928520:intron 30.0%
TTAAACCACAATCGAATGTT+TGG - chr6_2:74043734-74043753 None:intergenic 30.0%
!!! GTTTTATTTCAATGTGACCA+AGG + chr6_2:74044015-74044034 Msa0928520:intron 30.0%
ATGTAGAGTAAATGACATCT+AGG + chr6_2:74044261-74044280 Msa0928520:CDS 30.0%
AAATCATATCTCTTCATACG+GGG + chr6_2:74044298-74044317 Msa0928520:three_prime_UTR 30.0%
! GAATTCTTTCTCCTTTTCAA+TGG - chr6_2:74044369-74044388 None:intergenic 30.0%
TTGAAAAGGAGAAAGAATTC+AGG + chr6_2:74044369-74044388 Msa0928520:three_prime_UTR 30.0%
TCATGAAAGATGGAAATATG+AGG + chr6_2:74044421-74044440 Msa0928520:three_prime_UTR 30.0%
CATGAAAGATGGAAATATGA+GGG + chr6_2:74044422-74044441 Msa0928520:three_prime_UTR 30.0%
AACTAAAATCTCAATGTCAC+AGG - chr6_2:74044572-74044591 None:intergenic 30.0%
CGAGTAATATCTCAGATTCA+TGG + chr6_2:74038727-74038746 Msa0928520:exon 35.0%
AGATTCATGGATCGAATCAT+CGG + chr6_2:74038740-74038759 Msa0928520:exon 35.0%
AAAGTATGTTTGGTATCACC+GGG - chr6_2:74039126-74039145 None:intergenic 35.0%
! GAAAGTATGTTTGGTATCAC+CGG - chr6_2:74039127-74039146 None:intergenic 35.0%
TCATGGTTCACTATGATTCT+TGG - chr6_2:74039208-74039227 None:intergenic 35.0%
! GTGAACTACATTGATTAGCA+TGG + chr6_2:74039525-74039544 Msa0928520:intron 35.0%
! TTGATTTTCTGTTGTGTTGC+AGG + chr6_2:74039619-74039638 Msa0928520:intron 35.0%
TTGGCTTCATAAAGCAATTG+TGG - chr6_2:74039665-74039684 None:intergenic 35.0%
AGGTGTTCATGTATTTACTC+AGG + chr6_2:74039946-74039965 Msa0928520:intron 35.0%
CAATGTTGTCAATTGCAGAT+TGG - chr6_2:74040124-74040143 None:intergenic 35.0%
!! TGTGCTTGTTATGGATTTGT+TGG + chr6_2:74040303-74040322 Msa0928520:CDS 35.0%
!! GTGCTTGTTATGGATTTGTT+GGG + chr6_2:74040304-74040323 Msa0928520:CDS 35.0%
CAAAAAGATCCTCAAGACTA+GGG - chr6_2:74040330-74040349 None:intergenic 35.0%
ACAAAAAGATCCTCAAGACT+AGG - chr6_2:74040331-74040350 None:intergenic 35.0%
!! GAGGATCTTTTTGTTTACTG+TGG + chr6_2:74040337-74040356 Msa0928520:CDS 35.0%
!! CAACATCAAGACAGTTTTGA+GGG - chr6_2:74040374-74040393 None:intergenic 35.0%
GCACAAATGACATATACTCT+GGG - chr6_2:74040467-74040486 None:intergenic 35.0%
AGAATGCACATACTCTATTC+TGG - chr6_2:74040589-74040608 None:intergenic 35.0%
!! TATCCGGTTTTATATCCCTA+TGG - chr6_2:74040623-74040642 None:intergenic 35.0%
AAAACCGGATAACTTTCTCA+TGG + chr6_2:74040632-74040651 Msa0928520:CDS 35.0%
AAACCGGATAACTTTCTCAT+GGG + chr6_2:74040633-74040652 Msa0928520:CDS 35.0%
AAACTGTATATTCACTCACC+AGG - chr6_2:74040677-74040696 None:intergenic 35.0%
AAACCCGGTAAAAAAAAGAG+GGG - chr6_2:74040930-74040949 None:intergenic 35.0%
CAAACCCGGTAAAAAAAAGA+GGG - chr6_2:74040931-74040950 None:intergenic 35.0%
TCAAACCCGGTAAAAAAAAG+AGG - chr6_2:74040932-74040951 None:intergenic 35.0%
AGGGAGAACAAAAACTTAAC+AGG + chr6_2:74041063-74041082 Msa0928520:intron 35.0%
GGGAGAACAAAAACTTAACA+GGG + chr6_2:74041064-74041083 Msa0928520:intron 35.0%
!! GAAAGTATCAACTCCTATTG+AGG + chr6_2:74041452-74041471 Msa0928520:CDS 35.0%
!!! ACTTGTCTGTTGTTTTGTGT+AGG + chr6_2:74041533-74041552 Msa0928520:intron 35.0%
!! TGTGATTTAGGCTTTGAACA+TGG - chr6_2:74041756-74041775 None:intergenic 35.0%
TATTCCATTCCACAAAGATG+TGG + chr6_2:74041816-74041835 Msa0928520:intron 35.0%
ATTCCATTCCACAAAGATGT+GGG + chr6_2:74041817-74041836 Msa0928520:intron 35.0%
TCATAAACCAGAAATGAGTG+GGG - chr6_2:74042123-74042142 None:intergenic 35.0%
GTCATAAACCAGAAATGAGT+GGG - chr6_2:74042124-74042143 None:intergenic 35.0%
TGTCATAAACCAGAAATGAG+TGG - chr6_2:74042125-74042144 None:intergenic 35.0%
!! ACTCATTTCTGGTTTATGAC+AGG + chr6_2:74042124-74042143 Msa0928520:intron 35.0%
ATTTGTGTGTGTGTAGATTG+GGG + chr6_2:74042237-74042256 Msa0928520:intron 35.0%
TTCCAGTTTAAATCATCAGG+CGG + chr6_2:74042511-74042530 Msa0928520:CDS 35.0%
ATCATCAGGCGGTAAAAATT+TGG + chr6_2:74042522-74042541 Msa0928520:CDS 35.0%
AGAATGTAAGTCGTCTTACA+TGG + chr6_2:74042566-74042585 Msa0928520:intron 35.0%
TCGTCTTACATGGAGTAAAA+AGG + chr6_2:74042576-74042595 Msa0928520:intron 35.0%
! CAAAAGAGTGTGAAGTAGAA+GGG - chr6_2:74042755-74042774 None:intergenic 35.0%
! TCAAAAGAGTGTGAAGTAGA+AGG - chr6_2:74042756-74042775 None:intergenic 35.0%
!!! ACTCTTTTGAAGCATCAAGA+AGG + chr6_2:74042766-74042785 Msa0928520:CDS 35.0%
AAATTGGTCCTTCAAGTAGT+CGG + chr6_2:74042853-74042872 Msa0928520:CDS 35.0%
ACATAGCACAATATAAGCAG+TGG - chr6_2:74042999-74043018 None:intergenic 35.0%
AATCTGATCAAGAAGATTCC+TGG + chr6_2:74043030-74043049 Msa0928520:CDS 35.0%
AAACATGGAGCTGCATATTA+TGG + chr6_2:74043062-74043081 Msa0928520:CDS 35.0%
AACATGGAGCTGCATATTAT+GGG + chr6_2:74043063-74043082 Msa0928520:CDS 35.0%
GGAAAATGAGCAACATAAAC+TGG - chr6_2:74043169-74043188 None:intergenic 35.0%
AATCATTTGCAGTCACCTTA+GGG - chr6_2:74043192-74043211 None:intergenic 35.0%
GTATAAAATACAGACTGCAC+AGG + chr6_2:74043217-74043236 Msa0928520:intron 35.0%
GATTTGTGCCGTATAATAAG+TGG + chr6_2:74043356-74043375 Msa0928520:intron 35.0%
! GGTCATACATTCTGAAAACA+AGG - chr6_2:74043612-74043631 None:intergenic 35.0%
! CTTTTGCATCTGATTCATTG+TGG - chr6_2:74043633-74043652 None:intergenic 35.0%
GGTTTCTTCACAAACATCAA+AGG + chr6_2:74043680-74043699 Msa0928520:intron 35.0%
!!! AACATCAAAGGTAGTTTTGG+TGG + chr6_2:74043692-74043711 Msa0928520:intron 35.0%
TAGAGTAAATGACATCTAGG+TGG + chr6_2:74044264-74044283 Msa0928520:exon 35.0%
AATCATATCTCTTCATACGG+GGG + chr6_2:74044299-74044318 Msa0928520:three_prime_UTR 35.0%
AATGTCCACATCCATTGAAA+AGG + chr6_2:74044355-74044374 Msa0928520:three_prime_UTR 35.0%
! TTTCTCCTTTTCAATGGATG+TGG - chr6_2:74044363-74044382 None:intergenic 35.0%
AGGATCATACGTATGAAGAA+GGG - chr6_2:74044474-74044493 None:intergenic 35.0%
! ATTCTTATTTCGGTCCTCAA+GGG - chr6_2:74044500-74044519 None:intergenic 35.0%
! AATTCTTATTTCGGTCCTCA+AGG - chr6_2:74044501-74044520 None:intergenic 35.0%
AAATGAATTCAACACGCGGA+CGG - chr6_2:74038621-74038640 None:intergenic 40.0%
! TTCAAGTTAGGACGCAAGAT+CGG + chr6_2:74038770-74038789 Msa0928520:CDS 40.0%
TCCTTCGGTGAAATCTATCT+CGG + chr6_2:74038800-74038819 Msa0928520:CDS 40.0%
TGTACGAGATACTGTGATTC+TGG + chr6_2:74039094-74039113 Msa0928520:intron 40.0%
AAGTATGTTTGGTATCACCG+GGG - chr6_2:74039125-74039144 None:intergenic 40.0%
ACCATGAGATACTGTGATTC+TGG + chr6_2:74039221-74039240 Msa0928520:intron 40.0%
TTGTTACCGCAATGCATGTT+TGG + chr6_2:74039476-74039495 Msa0928520:intron 40.0%
TTTAGGGACAATTGAGACGT+TGG - chr6_2:74039821-74039840 None:intergenic 40.0%
TTGTCAAGTATCCGCTATAG+TGG + chr6_2:74039971-74039990 Msa0928520:intron 40.0%
ATAAGATGGAGTGGTGTAGA+CGG + chr6_2:74040271-74040290 Msa0928520:CDS 40.0%
! GGAAGACAATGTGCTTGTTA+TGG + chr6_2:74040294-74040313 Msa0928520:CDS 40.0%
! CCAACATCAAGACAGTTTTG+AGG - chr6_2:74040375-74040394 None:intergenic 40.0%
CCTCAAAACTGTCTTGATGT+TGG + chr6_2:74040372-74040391 Msa0928520:CDS 40.0%
! CTTGATGTTGGCTGATCAAA+TGG + chr6_2:74040384-74040403 Msa0928520:CDS 40.0%
TACGAAAGCCGGAACTAAAA+GGG - chr6_2:74040420-74040439 None:intergenic 40.0%
GGCACAAATGACATATACTC+TGG - chr6_2:74040468-74040487 None:intergenic 40.0%
ATAACCACATGACAAGACAG+TGG - chr6_2:74040489-74040508 None:intergenic 40.0%
! CGGGAAGTGTGCAATTATAA+AGG + chr6_2:74040518-74040537 Msa0928520:intron 40.0%
! ATTCTAAAGGGTTCCTCCAT+AGG + chr6_2:74040604-74040623 Msa0928520:CDS 40.0%
! TTCTAAAGGGTTCCTCCATA+GGG + chr6_2:74040605-74040624 Msa0928520:CDS 40.0%
CCTCCATAGGGATATAAAAC+CGG + chr6_2:74040617-74040636 Msa0928520:CDS 40.0%
AGTCCCATGAGAAAGTTATC+CGG - chr6_2:74040639-74040658 None:intergenic 40.0%
GATAACTTTCTCATGGGACT+TGG + chr6_2:74040639-74040658 Msa0928520:CDS 40.0%
TCGATGAAACAACTAGCTCA+AGG - chr6_2:74040742-74040761 None:intergenic 40.0%
TTGGGCTTGCAAAACGATAT+CGG + chr6_2:74040819-74040838 Msa0928520:CDS 40.0%
TTCAAAACCTGTATGGGATG+TGG - chr6_2:74040862-74040881 None:intergenic 40.0%
!!! TTCCCCCCTCTTTTTTTTAC+CGG + chr6_2:74040923-74040942 Msa0928520:intron 40.0%
AACCCGGTAAAAAAAAGAGG+GGG - chr6_2:74040929-74040948 None:intergenic 40.0%
CAAGCTGCAATACTCATCTT+GGG + chr6_2:74041100-74041119 Msa0928520:CDS 40.0%
TGCAATACTCATCTTGGGAT+TGG + chr6_2:74041105-74041124 Msa0928520:CDS 40.0%
TATTTGTAGAACAAAGCCGC+CGG + chr6_2:74041203-74041222 Msa0928520:intron 40.0%
! TTTTGTACTTCCTCAGAGGA+AGG + chr6_2:74041254-74041273 Msa0928520:CDS 40.0%
TCTTCCTTGGCAAAACCTAA+AGG + chr6_2:74041389-74041408 Msa0928520:CDS 40.0%
AAGTAGGAAGCAAACTCTAC+AGG - chr6_2:74041576-74041595 None:intergenic 40.0%
ATAATCAGGTCGCTGATCAA+AGG - chr6_2:74041619-74041638 None:intergenic 40.0%
TTTGATCAGCGACCTGATTA+TGG + chr6_2:74041618-74041637 Msa0928520:CDS 40.0%
GACCTGATTATGGATTCTTG+AGG + chr6_2:74041628-74041647 Msa0928520:CDS 40.0%
GAGCAAATAACTCCCGAAAT+AGG - chr6_2:74041656-74041675 None:intergenic 40.0%
!! CATTCGTTGGCTTGTGATTT+AGG - chr6_2:74041768-74041787 None:intergenic 40.0%
AATCACAAGCCAACGAATGT+TGG + chr6_2:74041769-74041788 Msa0928520:intron 40.0%
!! GAATGTTGGTTCAGTTGGTA+TGG + chr6_2:74041783-74041802 Msa0928520:intron 40.0%
CACTATCAGAGTCCTCAAAT+CGG - chr6_2:74041857-74041876 None:intergenic 40.0%
GATTTGAGGACTCTGATAGT+GGG + chr6_2:74041856-74041875 Msa0928520:intron 40.0%
CATAACCCATATTAAGCCTG+CGG + chr6_2:74041926-74041945 Msa0928520:intron 40.0%
ATAACCCATATTAAGCCTGC+GGG + chr6_2:74041927-74041946 Msa0928520:intron 40.0%
! TGAGTGGGGATGTTACATTT+TGG - chr6_2:74042109-74042128 None:intergenic 40.0%
GAACTTAACACCAGAAGAAG+TGG - chr6_2:74042494-74042513 None:intergenic 40.0%
TACCGCCTGATGATTTAAAC+TGG - chr6_2:74042516-74042535 None:intergenic 40.0%
AAGCTGCAAACCATAGACAT+GGG + chr6_2:74042817-74042836 Msa0928520:CDS 40.0%
ACATTCATCCGACTACTTGA+AGG - chr6_2:74042864-74042883 None:intergenic 40.0%
CAGTGGTCAATGATATGAGT+GGG - chr6_2:74042982-74043001 None:intergenic 40.0%
ACATGGAGCTGCATATTATG+GGG + chr6_2:74043064-74043083 Msa0928520:CDS 40.0%
AGCACATTTGTAGTCTCCAT+GGG - chr6_2:74043110-74043129 None:intergenic 40.0%
TAGCACATTTGTAGTCTCCA+TGG - chr6_2:74043111-74043130 None:intergenic 40.0%
GAGACTACAAATGTGCTACA+AGG + chr6_2:74043113-74043132 Msa0928520:CDS 40.0%
ATCATTTGCAGTCACCTTAG+GGG - chr6_2:74043191-74043210 None:intergenic 40.0%
CAATCATTTGCAGTCACCTT+AGG - chr6_2:74043193-74043212 None:intergenic 40.0%
GGTGACTGCAAATGATTGTT+TGG + chr6_2:74043195-74043214 Msa0928520:intron 40.0%
TATACGGCACAAATCACAAG+TGG - chr6_2:74043351-74043370 None:intergenic 40.0%
AAGTGCACTGTATCTTATGC+AGG - chr6_2:74043520-74043539 None:intergenic 40.0%
ACAAGCTGCTTACCATTTCA+TGG - chr6_2:74043583-74043602 None:intergenic 40.0%
TGAAATGGTAAGCAGCTTGT+CGG + chr6_2:74043583-74043602 Msa0928520:intron 40.0%
! TGTGGTTTAACGTTAGTCTG+AGG + chr6_2:74043744-74043763 Msa0928520:intron 40.0%
ATTTCAATGTGACCAAGGTG+TGG + chr6_2:74044020-74044039 Msa0928520:intron 40.0%
ATCATATCTCTTCATACGGG+GGG + chr6_2:74044300-74044319 Msa0928520:three_prime_UTR 40.0%
! ATGGTGGAGATCATGAAAGA+TGG + chr6_2:74044411-74044430 Msa0928520:three_prime_UTR 40.0%
GGATCATACGTATGAAGAAG+GGG - chr6_2:74044473-74044492 None:intergenic 40.0%
GAGGATCATACGTATGAAGA+AGG - chr6_2:74044475-74044494 None:intergenic 40.0%
!!! TTTTAGTTTCCCCGTCAATG+CGG + chr6_2:74044584-74044603 Msa0928520:three_prime_UTR 40.0%
! TAGTATTATCCGCATTGACG+GGG - chr6_2:74044596-74044615 None:intergenic 40.0%
! CTAGTATTATCCGCATTGAC+GGG - chr6_2:74044597-74044616 None:intergenic 40.0%
CCTAGTATTATCCGCATTGA+CGG - chr6_2:74044598-74044617 None:intergenic 40.0%
! GTTTTCCTTTTCCATTGCGG+TGG + chr6_2:74038649-74038668 Msa0928520:five_prime_UTR 45.0%
AAGATCGGAAGTGGATCCTT+CGG + chr6_2:74038785-74038804 Msa0928520:CDS 45.0%
ACCGAGATAGATTTCACCGA+AGG - chr6_2:74038804-74038823 None:intergenic 45.0%
GCCAGAATCACAGTATCTCA+TGG - chr6_2:74039225-74039244 None:intergenic 45.0%
CTGACACCAAACATGCATTG+CGG - chr6_2:74039485-74039504 None:intergenic 45.0%
!! TATAGTGGTGCTATAGCGCT+GGG + chr6_2:74040003-74040022 Msa0928520:intron 45.0%
GTGGTATCCCAAGCATAAGA+TGG + chr6_2:74040257-74040276 Msa0928520:CDS 45.0%
ATCCCAAGCATAAGATGGAG+TGG + chr6_2:74040262-74040281 Msa0928520:CDS 45.0%
CACCACTCCATCTTATGCTT+GGG - chr6_2:74040267-74040286 None:intergenic 45.0%
ACACCACTCCATCTTATGCT+TGG - chr6_2:74040268-74040287 None:intergenic 45.0%
TAAGATGGAGTGGTGTAGAC+GGG + chr6_2:74040272-74040291 Msa0928520:CDS 45.0%
AAGCCGGAACTAAAAGGGAT+GGG - chr6_2:74040415-74040434 None:intergenic 45.0%
AAAGCCGGAACTAAAAGGGA+TGG - chr6_2:74040416-74040435 None:intergenic 45.0%
CTACGAAAGCCGGAACTAAA+AGG - chr6_2:74040421-74040440 None:intergenic 45.0%
CATGTGGTTATGATGCCAAG+CGG + chr6_2:74040498-74040517 Msa0928520:intron 45.0%
ATGTGGTTATGATGCCAAGC+GGG + chr6_2:74040499-74040518 Msa0928520:intron 45.0%
ATAATTGCACACTTCCCGCT+TGG - chr6_2:74040516-74040535 None:intergenic 45.0%
!! CCGGTTTTATATCCCTATGG+AGG - chr6_2:74040620-74040639 None:intergenic 45.0%
! ACTTTCTCATGGGACTTGGT+CGG + chr6_2:74040643-74040662 Msa0928520:CDS 45.0%
CAACTAGCTCAAGGAATGAC+AGG - chr6_2:74040733-74040752 None:intergenic 45.0%
TGGGCTTGCAAAACGATATC+GGG + chr6_2:74040820-74040839 Msa0928520:CDS 45.0%
!!! TCCCCCCTCTTTTTTTTACC+GGG + chr6_2:74040924-74040943 Msa0928520:intron 45.0%
ACCCGGTAAAAAAAAGAGGG+GGG - chr6_2:74040928-74040947 None:intergenic 45.0%
GATGAGAAGAGCAGAGGTAA+AGG - chr6_2:74040999-74041018 None:intergenic 45.0%
GCAAGCTGCAATACTCATCT+TGG + chr6_2:74041099-74041118 Msa0928520:CDS 45.0%
ATTTGTAGAACAAAGCCGCC+GGG + chr6_2:74041204-74041223 Msa0928520:intron 45.0%
CAAGAGACTCCAAATCATCC+CGG - chr6_2:74041225-74041244 None:intergenic 45.0%
! GTGCTTTTGTACTTCCTCAG+AGG + chr6_2:74041250-74041269 Msa0928520:CDS 45.0%
TACTTCCTCAGAGGAAGGTA+TGG + chr6_2:74041259-74041278 Msa0928520:intron 45.0%
GAGCAGATGCTTACCTCAAT+AGG - chr6_2:74041468-74041487 None:intergenic 45.0%
! GGAATGGCAGTAATGGAAGT+AGG - chr6_2:74041592-74041611 None:intergenic 45.0%
AGGTCAAGGAATGGCAGTAA+TGG - chr6_2:74041599-74041618 None:intergenic 45.0%
GCTGATCAAAGGTCAAGGAA+TGG - chr6_2:74041608-74041627 None:intergenic 45.0%
CGCCTCAAGAATCCATAATC+AGG - chr6_2:74041633-74041652 None:intergenic 45.0%
! GATTCTTGAGGCGCCTATTT+CGG + chr6_2:74041640-74041659 Msa0928520:CDS 45.0%
! ATTCTTGAGGCGCCTATTTC+GGG + chr6_2:74041641-74041660 Msa0928520:CDS 45.0%
CCAACTGAACCAACATTCGT+TGG - chr6_2:74041781-74041800 None:intergenic 45.0%
!! CCAACGAATGTTGGTTCAGT+TGG + chr6_2:74041778-74041797 Msa0928520:intron 45.0%
GAACCCACATCTTTGTGGAA+TGG - chr6_2:74041823-74041842 None:intergenic 45.0%
CATTCGAACCCACATCTTTG+TGG - chr6_2:74041828-74041847 None:intergenic 45.0%
CGATTTGAGGACTCTGATAG+TGG + chr6_2:74041855-74041874 Msa0928520:intron 45.0%
GGCTCAATAAGCGCTTATAG+AGG - chr6_2:74041895-74041914 None:intergenic 45.0%
TAAGCGCTTATTGAGCCTTG+AGG + chr6_2:74041898-74041917 Msa0928520:intron 45.0%
! ATGGGTTATGGAAAGCCTCA+AGG - chr6_2:74041916-74041935 None:intergenic 45.0%
! CGCAGGCTTAATATGGGTTA+TGG - chr6_2:74041928-74041947 None:intergenic 45.0%
GTAACATCCCCACTCATTTC+TGG + chr6_2:74042113-74042132 Msa0928520:intron 45.0%
! CTCTACTCTTTTGTGACTGC+TGG - chr6_2:74042192-74042211 None:intergenic 45.0%
ACTTACGGATATGTGAGGCT+GGG - chr6_2:74042215-74042234 None:intergenic 45.0%
TACTTACGGATATGTGAGGC+TGG - chr6_2:74042216-74042235 None:intergenic 45.0%
!! TCAAGAAGCACCAACCTTGT+TGG - chr6_2:74042360-74042379 None:intergenic 45.0%
! TCAGACAATGCCACTTCTTC+TGG + chr6_2:74042481-74042500 Msa0928520:CDS 45.0%
! TTGGCTTCTGAGAATCCTCT+TGG + chr6_2:74042541-74042560 Msa0928520:CDS 45.0%
CGACTTACATTCTTGCCAAG+AGG - chr6_2:74042559-74042578 None:intergenic 45.0%
GCTGCACAGATTCAGTAGAA+AGG - chr6_2:74042609-74042628 None:intergenic 45.0%
! TCTATGGTTTGCAGCTTCAG+TGG - chr6_2:74042814-74042833 None:intergenic 45.0%
GAAGCTGCAAACCATAGACA+TGG + chr6_2:74042816-74042835 Msa0928520:CDS 45.0%
CAAACCATAGACATGGGCAA+GGG + chr6_2:74042823-74042842 Msa0928520:CDS 45.0%
GCAGTGGTCAATGATATGAG+TGG - chr6_2:74042983-74043002 None:intergenic 45.0%
TCCTGGCATGCATACAAACA+TGG + chr6_2:74043047-74043066 Msa0928520:CDS 45.0%
TCCATGTTTGTATGCATGCC+AGG - chr6_2:74043051-74043070 None:intergenic 45.0%
! TGTTGCTCATTTTCCCCCTA+AGG + chr6_2:74043174-74043193 Msa0928520:intron 45.0%
TCATTTGCAGTCACCTTAGG+GGG - chr6_2:74043190-74043209 None:intergenic 45.0%
AAATACAGACTGCACAGGCT+TGG + chr6_2:74043222-74043241 Msa0928520:intron 45.0%
CAAATCACAAGTGGCAAGAG+AGG - chr6_2:74043342-74043361 None:intergenic 45.0%
TCAGATGCAAAAGTTTCGGC+AGG + chr6_2:74043640-74043659 Msa0928520:intron 45.0%
CAGGATGACTCCCGAAATAA+TGG + chr6_2:74043659-74043678 Msa0928520:intron 45.0%
CGCTTCCAAACATTCGATTG+TGG + chr6_2:74043726-74043745 Msa0928520:intron 45.0%
ATTGCAGTTTGTCCACACCT+TGG - chr6_2:74044035-74044054 None:intergenic 45.0%
CCGTCAATGCGGATAATACT+AGG + chr6_2:74044595-74044614 Msa0928520:three_prime_UTR 45.0%
TGCGGATAATACTAGGTCAC+CGG + chr6_2:74044602-74044621 Msa0928520:three_prime_UTR 45.0%
ACAAGAACTAGCACAAGACC+CGG - chr6_2:74044624-74044643 None:intergenic 45.0%
AGTAGCCACCGCAATGGAAA+AGG - chr6_2:74038657-74038676 None:intergenic 50.0%
TTAGGACGCAAGATCGGAAG+TGG + chr6_2:74038776-74038795 Msa0928520:CDS 50.0%
CTTGACAGCAACGATCTCGA+AGG - chr6_2:74038953-74038972 None:intergenic 50.0%
CTGTGATTCTGGCATATCCC+CGG + chr6_2:74039105-74039124 Msa0928520:intron 50.0%
TCTGTTGTGTTGCAGGAGAC+TGG + chr6_2:74039626-74039645 Msa0928520:intron 50.0%
AGGGACAATTGAGACGTTGG+AGG - chr6_2:74039818-74039837 None:intergenic 50.0%
!! TAGCGGAAGCACCACTATAG+CGG - chr6_2:74039985-74040004 None:intergenic 50.0%
TAGTGGTGCTTCCGCTATAG+TGG + chr6_2:74039988-74040007 Msa0928520:intron 50.0%
GCGCTATAGCACCACTATAG+CGG - chr6_2:74040002-74040021 None:intergenic 50.0%
!! CTATAGTGGTGCTATAGCGC+TGG + chr6_2:74040002-74040021 Msa0928520:intron 50.0%
!! ATAGTGGTGCTATAGCGCTG+GGG + chr6_2:74040004-74040023 Msa0928520:intron 50.0%
AAGATGGAGTGGTGTAGACG+GGG + chr6_2:74040273-74040292 Msa0928520:CDS 50.0%
!! TTTGTTGGGCCCTAGTCTTG+AGG + chr6_2:74040318-74040337 Msa0928520:CDS 50.0%
!!! ACCCCCATCCCTTTTAGTTC+CGG + chr6_2:74040409-74040428 Msa0928520:intron 50.0%
AGCCGGAACTAAAAGGGATG+GGG - chr6_2:74040414-74040433 None:intergenic 50.0%
CATCACAAGGCTACGAAAGC+CGG - chr6_2:74040431-74040450 None:intergenic 50.0%
! TGTGCCACTGTCTTGTCATG+TGG + chr6_2:74040482-74040501 Msa0928520:intron 50.0%
GTGCTTGTGCTGTACATGTC+AGG + chr6_2:74040781-74040800 Msa0928520:intron 50.0%
CTAAGGGATGAGAAGAGCAG+AGG - chr6_2:74041005-74041024 None:intergenic 50.0%
! CGGGATGATTTGGAGTCTCT+TGG + chr6_2:74041223-74041242 Msa0928520:CDS 50.0%
GAATGCCATACCTTCCTCTG+AGG - chr6_2:74041267-74041286 None:intergenic 50.0%
!! GCAGCCTTTAGGTTTTGCCA+AGG - chr6_2:74041396-74041415 None:intergenic 50.0%
GCTTCTTTGTCGCAGCCTTT+AGG - chr6_2:74041407-74041426 None:intergenic 50.0%
AGGTCGCTGATCAAAGGTCA+AGG - chr6_2:74041613-74041632 None:intergenic 50.0%
CGGGAGTTATTTGCTCGAGA+AGG + chr6_2:74041660-74041679 Msa0928520:CDS 50.0%
GAGTCCCGCAGGCTTAATAT+GGG - chr6_2:74041934-74041953 None:intergenic 50.0%
TGAGTCCCGCAGGCTTAATA+TGG - chr6_2:74041935-74041954 None:intergenic 50.0%
TTGTTGCTCGCTACAGGAAC+CGG - chr6_2:74042310-74042329 None:intergenic 50.0%
! TGGTTTGCAGCTTCAGTGGA+CGG - chr6_2:74042810-74042829 None:intergenic 50.0%
GCAAACCATAGACATGGGCA+AGG + chr6_2:74042822-74042841 Msa0928520:CDS 50.0%
GGGCAAGGGAGCAGTAAAAT+TGG + chr6_2:74042837-74042856 Msa0928520:CDS 50.0%
CAAGTGGCAAGAGAGGCAAA+TGG - chr6_2:74043335-74043354 None:intergenic 50.0%
TATCTCTTCATACGGGGGGA+TGG + chr6_2:74044304-74044323 Msa0928520:three_prime_UTR 50.0%
ATGGATCCTCTCGTGTCATG+AGG + chr6_2:74044323-74044342 Msa0928520:three_prime_UTR 50.0%
TGGATCCTCTCGTGTCATGA+GGG + chr6_2:74044324-74044343 Msa0928520:three_prime_UTR 50.0%
ATAGACCCTCATGACACGAG+AGG - chr6_2:74044332-74044351 None:intergenic 50.0%
CGTATGATCCTCAACCCTTG+AGG + chr6_2:74044483-74044502 Msa0928520:three_prime_UTR 50.0%
ATTTCGGTCCTCAAGGGTTG+AGG - chr6_2:74044494-74044513 None:intergenic 50.0%
GCGGATAATACTAGGTCACC+GGG + chr6_2:74044603-74044622 Msa0928520:three_prime_UTR 50.0%
GAATTCAACACGCGGACGGA+TGG - chr6_2:74038617-74038636 None:intergenic 55.0%
GAAGAGAGTAGCCACCGCAA+TGG - chr6_2:74038663-74038682 None:intergenic 55.0%
GCCGGAACTAAAAGGGATGG+GGG - chr6_2:74040413-74040432 None:intergenic 55.0%
! TCTCATGGGACTTGGTCGGA+AGG + chr6_2:74040647-74040666 Msa0928520:CDS 55.0%
ACTTGGTCGGAAGGCAAACC+TGG + chr6_2:74040656-74040675 Msa0928520:CDS 55.0%
! TGGGATGTGGCGATTGGTTG+TGG - chr6_2:74040849-74040868 None:intergenic 55.0%
CCTGTATGGGATGTGGCGAT+TGG - chr6_2:74040855-74040874 None:intergenic 55.0%
CCAATCGCCACATCCCATAC+AGG + chr6_2:74040852-74040871 Msa0928520:CDS 55.0%
ACAAAGCCGCCGGGATGATT+TGG + chr6_2:74041213-74041232 Msa0928520:CDS 55.0%
GAGACTCCAAATCATCCCGG+CGG - chr6_2:74041222-74041241 None:intergenic 55.0%
AGATGTGGGTTCGAATGCCG+CGG + chr6_2:74041831-74041850 Msa0928520:intron 55.0%
!! TTAGGTGGATTGAGTCCCGC+AGG - chr6_2:74041945-74041964 None:intergenic 55.0%
CAACAATCGCGCAATGCCCA+TGG + chr6_2:74042324-74042343 Msa0928520:CDS 55.0%
GTTTGCAGCTTCAGTGGACG+GGG - chr6_2:74042808-74042827 None:intergenic 55.0%
GGTTTGCAGCTTCAGTGGAC+GGG - chr6_2:74042809-74042828 None:intergenic 55.0%
TGCTCCCTTGCCCATGTCTA+TGG - chr6_2:74042830-74042849 None:intergenic 55.0%
GCTTGCAAGTGATCTGCCCA+TGG + chr6_2:74043091-74043110 Msa0928520:CDS 55.0%
TCAACACGCGGACGGATGGA+CGG - chr6_2:74038613-74038632 None:intergenic 60.0%
CAGAGTCCTCAAATCGGCCG+CGG - chr6_2:74041851-74041870 None:intergenic 60.0%
GCGCGATTGTTGCTCGCTAC+AGG - chr6_2:74042316-74042335 None:intergenic 60.0%
AGTGGACGGGGAAGGCTTCA+AGG - chr6_2:74042796-74042815 None:intergenic 60.0%
!! CGAATGCCGCGGCCGATTTG+AGG + chr6_2:74041842-74041861 Msa0928520:intron 65.0%
GCAGCTTCAGTGGACGGGGA+AGG - chr6_2:74042804-74042823 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 74038557 74044665 74038557 ID=Msa0928520;Name=Msa0928520
chr6_2 mRNA 74038557 74044665 74038557 ID=Msa0928520-mRNA-1;Parent=Msa0928520;Name=Msa0928520-mRNA-1;_AED=0.18;_eAED=0.18;_QI=189|0.86|0.93|1|0.86|0.93|16|383|507
chr6_2 exon 74038557 74038821 74038557 ID=Msa0928520-mRNA-1:exon:12590;Parent=Msa0928520-mRNA-1
chr6_2 exon 74038935 74038975 74038935 ID=Msa0928520-mRNA-1:exon:12591;Parent=Msa0928520-mRNA-1
chr6_2 exon 74039641 74039710 74039641 ID=Msa0928520-mRNA-1:exon:12592;Parent=Msa0928520-mRNA-1
chr6_2 exon 74040257 74040405 74040257 ID=Msa0928520-mRNA-1:exon:12593;Parent=Msa0928520-mRNA-1
chr6_2 exon 74040582 74040677 74040582 ID=Msa0928520-mRNA-1:exon:12594;Parent=Msa0928520-mRNA-1
chr6_2 exon 74040803 74040873 74040803 ID=Msa0928520-mRNA-1:exon:12595;Parent=Msa0928520-mRNA-1
chr6_2 exon 74041065 74041126 74041065 ID=Msa0928520-mRNA-1:exon:12596;Parent=Msa0928520-mRNA-1
chr6_2 exon 74041212 74041275 74041212 ID=Msa0928520-mRNA-1:exon:12597;Parent=Msa0928520-mRNA-1
chr6_2 exon 74041389 74041473 74041389 ID=Msa0928520-mRNA-1:exon:12598;Parent=Msa0928520-mRNA-1
chr6_2 exon 74041555 74041681 74041555 ID=Msa0928520-mRNA-1:exon:12599;Parent=Msa0928520-mRNA-1
chr6_2 exon 74042146 74042228 74042146 ID=Msa0928520-mRNA-1:exon:12600;Parent=Msa0928520-mRNA-1
chr6_2 exon 74042307 74042364 74042307 ID=Msa0928520-mRNA-1:exon:12601;Parent=Msa0928520-mRNA-1
chr6_2 exon 74042455 74042570 74042455 ID=Msa0928520-mRNA-1:exon:12602;Parent=Msa0928520-mRNA-1
chr6_2 exon 74042732 74042894 74042732 ID=Msa0928520-mRNA-1:exon:12603;Parent=Msa0928520-mRNA-1
chr6_2 exon 74043025 74043134 74043025 ID=Msa0928520-mRNA-1:exon:12604;Parent=Msa0928520-mRNA-1
chr6_2 exon 74044130 74044665 74044130 ID=Msa0928520-mRNA-1:exon:12605;Parent=Msa0928520-mRNA-1
chr6_2 five_prime_UTR 74038557 74038745 74038557 ID=Msa0928520-mRNA-1:five_prime_utr;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74038746 74038821 74038746 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74038935 74038975 74038935 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74039641 74039710 74039641 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74040257 74040405 74040257 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74040582 74040677 74040582 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74040803 74040873 74040803 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74041065 74041126 74041065 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74041212 74041275 74041212 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74041389 74041473 74041389 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74041555 74041681 74041555 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74042146 74042228 74042146 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74042307 74042364 74042307 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74042455 74042570 74042455 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74042732 74042894 74042732 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74043025 74043134 74043025 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 CDS 74044130 74044282 74044130 ID=Msa0928520-mRNA-1:cds;Parent=Msa0928520-mRNA-1
chr6_2 three_prime_UTR 74044283 74044665 74044283 ID=Msa0928520-mRNA-1:three_prime_utr;Parent=Msa0928520-mRNA-1
Gene Sequence

>Msa0928520

ATGGATCGAATCATCGGTGATAAATTCAAGTTAGGACGCAAGATCGGAAGTGGATCCTTCGGTGAAATCTATCTCGCTACTCATATTGATACCTTCGAGATCGTTGCTGTCAAGATCGAGACTGGTAAAACGAAGCATCCACAATTGCTTTATGAAGCCAAGCTCTATAATATTCTTCAAGGAGGAAGTGGTATCCCAAGCATAAGATGGAGTGGTGTAGACGGGGAAGACAATGTGCTTGTTATGGATTTGTTGGGCCCTAGTCTTGAGGATCTTTTTGTTTACTGTGGAAGAAAATTTTCCCTCAAAACTGTCTTGATGTTGGCTGATCAAATGATGACCAGAATAGAGTATGTGCATTCTAAAGGGTTCCTCCATAGGGATATAAAACCGGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCTGGTATATGTAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCCACAACCAATCGCCACATCCCATACAGGGAGAACAAAAACTTAACAGGGACTGCGCGTTATGCAAGCTGCAATACTCATCTTGGGATTGAACAAAGCCGCCGGGATGATTTGGAGTCTCTTGGATATGTGCTTTTGTACTTCCTCAGAGGAAGTCTTCCTTGGCAAAACCTAAAGGCTGCGACAAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTTTTATGCAAATCTCATCCTGTAGAGTTTGCTTCCTACTTCCATTACTGCCATTCCTTGACCTTTGATCAGCGACCTGATTATGGATTCTTGAGGCGCCTATTTCGGGAGTTATTTGCTCGAGAAGGTTACAAATTTGATTATGTATTTGATTGGACAATTTTGAAGTACCAGCAGTCACAAAAGAGTAGAGCCCAGCCTCACATATCCCCGGTTCCTGTAGCGAGCAACAATCGCGCAATGCCCATGGATATTGATAACCAACAAGGGAATGTCTCTGCAGAGCAAATTAGATCAGACAATGCCACTTCTTCTGGTGTTAAGTTCCAGTTTAAATCATCAGGCGGTAAAAATTTGGCTTCTGAGAATCCTCTTGGCAAGAATATTTTTGGTGAAGCAACTATCCCTTCTACTTCACACTCTTTTGAAGCATCAAGAAGGAACTCCTTGAAGCCTTCCCCGTCCACTGAAGCTGCAAACCATAGACATGGGCAAGGGAGCAGTAAAATTGGTCCTTCAAGTAGTCGGATGAATGTTCTTCACATAAGTGTGAATCTGATCAAGAAGATTCCTGGCATGCATACAAACATGGAGCTGCATATTATGGGGTATTGCTTGCAAGTGATCTGCCCATGGAGACTACAAATGTGCTACAAGGTCTCTTTTTTTCTAATCTATATGGCAATGGATGAAATATGCAAAGACTATTGCATTTATATGGATGCCATCTACATTTTTTCTTTTTGGAGGATTTCCTTTTTTAACCTATATGGGTTAAAGAATGAAATATGTAGAGTAAATGACATCTAG
Protein sequence

>Msa0928520

MDRIIGDKFKLGRKIGSGSFGEIYLATHIDTFEIVAVKIETGKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANLVYVIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLRRLFRELFAREGYKFDYVFDWTILKYQQSQKSRAQPHISPVPVASNNRAMPMDIDNQQGNVSAEQIRSDNATSSGVKFQFKSSGGKNLASENPLGKNIFGEATIPSTSHSFEASRRNSLKPSPSTEAANHRHGQGSSKIGPSSSRMNVLHISVNLIKKIPGMHTNMELHIMGYCLQVICPWRLQMCYKVSFFLIYMAMDEICKDYCIYMDAIYIFSFWRISFFNLYGLKNEICRVNDI*