AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0932450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932450 MtrunA17_Chr6g0449401 90.895 659 22 2 1 621 13 671 0.0 1204
Msa0932450 MtrunA17_Chr7g0227331 68.000 650 161 15 1 636 1 617 0.0 820
Msa0932450 MtrunA17_Chr2g0290691 72.429 457 117 3 159 607 113 568 0.0 698
Msa0932450 MtrunA17_Chr7g0250631 63.561 483 162 6 148 618 255 735 0.0 617
Msa0932450 MtrunA17_Chr8g0335351 66.450 462 143 6 148 599 261 720 0.0 608
Msa0932450 MtrunA17_Chr1g0179101 64.165 413 140 4 192 600 413 821 0.0 545
Msa0932450 MtrunA17_Chr7g0266031 59.436 461 174 6 148 600 388 843 0.0 545
Msa0932450 MtrunA17_Chr3g0080101 58.352 449 161 8 163 601 337 769 6.08e-178 525
Msa0932450 MtrunA17_Chr8g0356291 61.962 418 149 6 189 600 65 478 8.58e-178 515
Msa0932450 MtrunA17_Chr2g0309421 62.189 402 141 5 204 600 131 526 5.85e-177 514
Msa0932450 MtrunA17_Chr4g0063311 53.623 414 165 7 221 615 62 467 1.91e-146 434
Msa0932450 MtrunA17_Chr2g0321101 52.987 385 145 7 229 593 66 434 2.46e-128 386
Msa0932450 MtrunA17_Chr8g0381091 47.805 410 182 6 225 620 52 443 9.71e-121 366
Msa0932450 MtrunA17_Chr2g0285711 47.585 414 184 6 200 600 32 425 1.76e-120 365
Msa0932450 MtrunA17_Chr2g0312641 43.269 416 193 11 198 599 33 419 4.29e-111 342
Msa0932450 MtrunA17_Chr4g0030361 46.933 375 152 4 225 599 282 609 8.40e-110 344
Msa0932450 MtrunA17_Chr8g0369091 45.153 392 169 3 225 614 572 919 2.83e-108 348
Msa0932450 MtrunA17_Chr2g0327561 47.467 375 161 2 225 599 601 939 4.57e-106 343
Msa0932450 MtrunA17_Chr8g0338741 39.474 380 171 12 247 600 15 361 7.23e-78 254
Msa0932450 MtrunA17_Chr2g0329011 38.719 359 178 7 247 600 12 333 3.21e-74 243
Msa0932450 MtrunA17_Chr4g0032761 37.302 378 195 8 247 600 10 369 1.19e-71 237
Msa0932450 MtrunA17_Chr7g0234641 34.656 378 220 7 247 615 8 367 9.28e-68 227
Msa0932450 MtrunA17_Chr4g0018201 35.278 360 180 8 252 610 759 1066 5.13e-58 211
Msa0932450 MtrunA17_Chr5g0428981 35.000 360 181 8 252 610 763 1070 6.95e-58 211
Msa0932450 MtrunA17_Chr6g0478601 34.278 353 188 8 249 600 108 417 1.04e-56 200
Msa0932450 MtrunA17_Chr3g0135951 31.387 411 233 13 185 588 38 406 7.66e-50 181
Msa0932450 MtrunA17_Chr1g0153321 30.726 358 205 8 240 591 96 416 4.67e-48 176
Msa0932450 MtrunA17_Chr2g0299781 29.834 362 222 8 231 588 92 425 1.04e-46 172
Msa0932450 MtrunA17_Chr1g0187581 31.755 359 194 10 252 599 117 435 1.88e-46 172
Msa0932450 MtrunA17_Chr1g0167351 31.148 366 208 10 243 599 99 429 2.13e-45 169
Msa0932450 MtrunA17_Chr1g0167311 30.729 384 223 12 225 601 85 432 4.33e-45 168
Msa0932450 MtrunA17_Chr1g0183651 30.518 367 211 9 240 599 108 437 7.20e-45 168
Msa0932450 MtrunA17_Chr7g0261491 29.469 414 234 13 197 599 75 441 7.40e-43 162
Msa0932450 MtrunA17_Chr7g0245031 39.865 148 87 1 252 399 148 293 5.93e-27 114
Msa0932450 MtrunA17_Chr7g0245031 43.363 113 61 2 477 588 299 409 1.07e-20 95.9
Msa0932450 MtrunA17_Chr4g0059751 37.580 157 85 3 252 399 89 241 4.68e-26 111
Msa0932450 MtrunA17_Chr4g0059751 37.288 118 71 2 477 593 247 362 6.99e-21 95.9
Msa0932450 MtrunA17_Chr1g0197721 36.076 158 99 1 239 396 38 193 9.56e-24 105
Msa0932450 MtrunA17_Chr1g0197721 33.577 137 85 3 464 599 203 334 1.34e-11 67.4
Msa0932450 MtrunA17_Chr8g0351491 26.239 343 173 8 241 583 5 267 2.73e-21 94.4
Msa0932450 MtrunA17_Chr3g0140631 35.526 152 96 1 249 400 34 183 4.20e-21 94.4
Msa0932450 MtrunA17_Chr3g0140631 35.185 108 66 1 476 583 185 288 2.83e-15 77.0
Msa0932450 MtrunA17_Chr2g0286501 25.970 335 170 8 249 583 46 302 7.62e-21 97.8
Msa0932450 MtrunA17_Chr3g0125381 40.541 111 62 1 473 583 100 206 1.50e-20 90.9
Msa0932450 MtrunA17_Chr3g0125381 29.775 178 109 6 302 468 2 174 4.58e-11 63.2
Msa0932450 MtrunA17_Chr3g0132591 26.748 329 152 8 258 583 118 360 1.69e-19 92.0
Msa0932450 MtrunA17_Chr4g0013131 23.000 400 207 15 243 637 3 306 4.31e-18 87.4
Msa0932450 MtrunA17_Chr3g0114511 32.484 157 99 2 244 399 24 174 8.61e-18 86.7
Msa0932450 MtrunA17_Chr7g0244521 25.073 343 174 11 244 583 4 266 8.82e-18 86.7
Msa0932450 MtrunA17_Chr8g0353621 31.285 179 116 2 252 425 10 186 1.41e-17 83.2
Msa0932450 MtrunA17_Chr8g0353621 40.196 102 57 1 482 583 164 261 7.73e-16 78.2
Msa0932450 MtrunA17_Chr3g0107051 35.099 151 95 2 249 399 18 165 1.53e-17 85.9
Msa0932450 MtrunA17_Chr8g0379091 32.680 153 100 1 247 399 21 170 2.33e-17 85.5
Msa0932450 MtrunA17_Chr6g0453681 24.850 334 172 9 251 584 18 272 3.03e-17 85.1
Msa0932450 MtrunA17_Chr6g0468751 24.925 333 171 9 251 583 18 271 3.46e-17 85.1
Msa0932450 MtrunA17_Chr1g0188031 32.704 159 91 4 249 399 17 167 3.60e-17 84.3
Msa0932450 MtrunA17_Chr1g0205421 32.911 158 99 3 243 398 3 155 4.30e-17 84.3
Msa0932450 MtrunA17_Chr2g0284031 32.026 153 101 1 247 399 26 175 4.33e-17 84.7
Msa0932450 MtrunA17_Chr3g0132671 24.793 363 164 11 251 583 18 301 4.49e-17 84.7
Msa0932450 MtrunA17_Chr2g0302431 30.864 162 110 2 238 399 6 165 9.86e-17 83.2
Msa0932450 MtrunA17_Chr5g0432491 34.437 151 97 2 249 399 20 168 1.36e-16 82.8
Msa0932450 MtrunA17_Chr3g0107011 24.047 341 174 11 249 585 11 270 1.50e-16 82.8
Msa0932450 MtrunA17_Chr8g0346071 23.631 347 180 12 238 583 8 270 2.05e-16 82.0
Msa0932450 MtrunA17_Chr2g0321841 29.221 154 103 3 249 399 1 151 3.29e-16 82.8
Msa0932450 MtrunA17_Chr2g0284011 24.918 305 150 9 244 544 4 233 3.70e-16 81.3
Msa0932450 MtrunA17_Chr4g0074111 24.188 277 135 7 250 524 16 219 4.40e-16 80.9
Msa0932450 MtrunA17_Chr4g0025671 28.387 155 105 3 248 399 4 155 5.45e-16 82.0
Msa0932450 MtrunA17_Chr1g0190831 28.387 155 103 3 249 399 1 151 1.04e-15 80.9
Msa0932450 MtrunA17_Chr2g0330211 23.416 363 205 11 247 595 13 316 1.19e-15 80.1
Msa0932450 MtrunA17_Chr5g0428031 29.605 152 105 2 248 399 5 154 1.38e-15 79.7
Msa0932450 MtrunA17_Chr4g0063881 29.091 165 115 1 248 412 7 169 1.88e-15 79.3
Msa0932450 MtrunA17_Chr1g0173921 28.571 154 104 3 249 399 1 151 4.47e-15 79.3
Msa0932450 MtrunA17_Chr5g0432471 22.324 327 169 10 249 569 9 256 6.38e-15 77.8
Msa0932450 MtrunA17_Chr7g0272841 30.688 189 114 6 252 432 68 247 1.42e-14 77.0
Msa0932450 MtrunA17_Chr7g0258051 26.115 157 110 3 248 401 12 165 1.73e-14 77.0
Msa0932450 MtrunA17_Chr2g0304111 29.560 159 105 3 241 399 17 168 2.49e-14 75.9
Msa0932450 MtrunA17_Chr8g0385341 33.333 153 96 4 252 400 30 180 3.04e-14 75.9
Msa0932450 MtrunA17_Chr6g0486661 35.433 127 72 5 479 599 912 1034 3.09e-14 76.6
Msa0932450 MtrunA17_Chr7g0274941 30.323 155 103 3 244 396 8 159 5.18e-14 73.2
Msa0932450 MtrunA17_Chr7g0274941 35.922 103 59 3 484 583 176 274 7.58e-11 63.5
Msa0932450 MtrunA17_Chr3g0091311 30.128 156 106 2 244 399 4 156 7.20e-14 72.0
Msa0932450 MtrunA17_Chr1g0185221 27.273 154 106 3 249 399 1 151 8.05e-14 74.7
Msa0932450 MtrunA17_Chr5g0441011 30.864 162 101 5 240 399 6 158 8.22e-14 73.9
Msa0932450 MtrunA17_Chr7g0260191 26.623 154 107 3 249 399 1 151 1.15e-13 74.3
Msa0932450 MtrunA17_Chr5g0419441 28.947 152 105 2 252 403 239 387 1.20e-13 74.3
Msa0932450 MtrunA17_Chr1g0200601 31.818 154 99 4 251 400 29 180 1.38e-13 73.6
Msa0932450 MtrunA17_Chr1g0170551 33.019 106 65 2 482 587 162 261 1.62e-13 74.3
Msa0932450 MtrunA17_Chr1g0170551 29.375 160 109 3 252 411 7 162 5.53e-12 69.3
Msa0932450 MtrunA17_Chr1g0166101 30.380 158 95 3 249 399 21 170 1.63e-13 73.2
Msa0932450 MtrunA17_Chr5g0409421 26.176 340 193 12 249 585 1 285 1.69e-13 73.2
Msa0932450 MtrunA17_Chr1g0205931 29.545 220 130 8 240 449 53 257 1.86e-13 73.6
Msa0932450 MtrunA17_Chr1g0202831 28.402 169 111 3 240 403 399 562 1.98e-13 73.9
Msa0932450 MtrunA17_Chr4g0001331 30.921 152 97 3 248 399 21 164 2.01e-13 72.8
Msa0932450 MtrunA17_Chr1g0150321 31.126 151 101 2 249 399 10 157 2.60e-13 72.4
Msa0932450 MtrunA17_Chr2g0317001 27.632 152 106 2 252 403 15 162 2.71e-13 73.2
Msa0932450 MtrunA17_Chr7g0256001 30.435 184 113 6 251 427 140 315 2.74e-13 73.2
Msa0932450 MtrunA17_Chr8g0339221 27.089 395 217 17 249 634 1 333 4.63e-13 71.6
Msa0932450 MtrunA17_Chr8g0346081 28.302 159 107 3 241 399 11 162 4.73e-13 71.6
Msa0932450 MtrunA17_Chr1g0176421 30.337 178 115 5 252 427 161 331 7.71e-13 71.6
Msa0932450 MtrunA17_Chr8g0345801 32.374 139 87 4 249 385 12 145 7.99e-13 69.3
Msa0932450 MtrunA17_Chr3g0130151 30.675 163 107 5 250 409 242 401 9.18e-13 71.2
Msa0932450 MtrunA17_Chr1g0170281 31.677 161 100 5 248 400 110 268 1.40e-12 70.9
Msa0932450 MtrunA17_Chr3g0091281 25.442 283 133 9 244 523 4 211 1.72e-12 67.8
Msa0932450 MtrunA17_Chr5g0448721 28.415 183 122 5 252 432 96 271 2.01e-12 70.1
Msa0932450 MtrunA17_Chr1g0203881 32.432 148 94 3 256 399 45 190 3.01e-12 69.3
Msa0932450 MtrunA17_Chr8g0374701 29.697 165 102 5 267 427 148 302 3.48e-12 69.3
Msa0932450 MtrunA17_Chr4g0008561 27.273 176 111 6 415 584 113 277 4.80e-12 69.3
Msa0932450 MtrunA17_Chr2g0317501 31.579 171 108 6 234 399 114 280 5.21e-12 68.9
Msa0932450 MtrunA17_Chr3g0133541 31.579 152 101 2 250 399 305 455 6.23e-12 68.9
Msa0932450 MtrunA17_Chr8g0384301 26.882 186 123 5 249 431 296 471 6.35e-12 68.9
Msa0932450 MtrunA17_Chr5g0441691 29.444 180 114 5 252 427 68 238 8.40e-12 68.2
Msa0932450 MtrunA17_Chr1g0173541 32.051 156 100 4 249 400 49 202 1.03e-11 67.8
Msa0932450 MtrunA17_Chr4g0047191 30.693 101 70 0 299 399 94 194 1.95e-11 66.2
Msa0932450 MtrunA17_Chr4g0047211 30.693 101 70 0 299 399 89 189 2.32e-11 65.9
Msa0932450 MtrunA17_Chr0c02g0489761 29.444 180 114 5 252 427 78 248 2.59e-11 66.6
Msa0932450 MtrunA17_Chr4g0074811 32.680 153 97 5 252 400 91 241 2.73e-11 66.6
Msa0932450 MtrunA17_Chr4g0045261 29.412 153 96 4 279 427 167 311 2.76e-11 66.6
Msa0932450 MtrunA17_Chr1g0201571 32.026 153 93 6 252 399 126 272 2.83e-11 66.6
Msa0932450 MtrunA17_Chr3g0129721 32.051 156 93 6 251 399 23 172 2.95e-11 64.7
Msa0932450 MtrunA17_Chr2g0333821 29.730 148 101 2 252 399 14 158 3.07e-11 65.9
Msa0932450 MtrunA17_Chr5g0444171 30.065 153 101 4 252 400 92 242 3.20e-11 66.2
Msa0932450 MtrunA17_Chr3g0091421 30.573 157 102 4 245 399 5 156 3.86e-11 63.9
Msa0932450 MtrunA17_Chr7g0257751 31.373 153 99 4 252 400 58 208 4.44e-11 65.9
Msa0932450 MtrunA17_Chr7g0252301 29.814 161 106 3 250 407 853 1009 5.01e-11 66.2
Msa0932450 MtrunA17_Chr1g0188991 27.273 187 123 4 252 437 15 189 7.14e-11 65.5
Msa0932450 MtrunA17_Chr5g0402551 27.660 188 121 6 252 432 134 313 7.44e-11 65.1
Msa0932450 MtrunA17_Chr3g0131181 30.719 153 100 4 252 400 29 179 8.34e-11 65.1
Msa0932450 MtrunA17_Chr5g0405421 26.519 181 120 5 252 427 99 271 9.70e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932450 AT5G47750.1 70.231 477 119 6 159 617 98 569 0.0 678
Msa0932450 AT4G26610.1 72.429 457 119 5 148 601 22 474 0.0 667
Msa0932450 AT5G55910.2 70.450 467 127 5 151 611 13 474 0.0 652
Msa0932450 AT5G55910.1 70.450 467 127 5 151 611 13 474 0.0 652
Msa0932450 AT3G27580.2 70.105 475 119 6 140 606 80 539 0.0 650
Msa0932450 AT3G27580.1 70.105 475 119 6 140 606 80 539 0.0 650
Msa0932450 AT2G44830.2 65.237 443 142 8 192 628 303 739 0.0 584
Msa0932450 AT2G44830.3 65.237 443 142 8 192 628 303 739 0.0 584
Msa0932450 AT2G44830.1 65.237 443 142 8 192 628 303 739 0.0 584
Msa0932450 AT5G40030.1 66.927 384 112 6 225 601 86 461 0.0 540
Msa0932450 AT1G79250.1 66.142 381 122 3 225 600 119 497 0.0 525
Msa0932450 AT1G79250.3 66.142 381 122 3 225 600 119 497 0.0 525
Msa0932450 AT1G79250.2 66.142 381 122 3 225 600 119 497 0.0 525
Msa0932450 AT1G79250.4 66.142 381 122 3 225 600 119 497 0.0 525
Msa0932450 AT3G52890.2 61.190 420 150 4 192 600 479 896 1.46e-178 531
Msa0932450 AT3G52890.4 61.190 420 150 4 192 600 479 896 1.46e-178 531
Msa0932450 AT3G52890.1 61.190 420 150 4 192 600 479 896 1.46e-178 531
Msa0932450 AT3G52890.3 61.190 420 150 4 192 600 479 896 1.46e-178 531
Msa0932450 AT3G12690.1 62.341 393 141 3 208 600 141 526 7.12e-177 515
Msa0932450 AT3G12690.3 62.341 393 141 3 208 600 141 526 7.12e-177 515
Msa0932450 AT3G12690.2 62.341 393 141 3 208 600 141 526 7.12e-177 515
Msa0932450 AT5G03640.2 58.837 430 158 6 183 600 473 895 3.65e-175 522
Msa0932450 AT5G03640.1 58.837 430 158 6 183 600 473 895 3.65e-175 522
Msa0932450 AT1G16440.1 65.079 378 120 4 225 600 86 453 9.61e-175 506
Msa0932450 AT2G36350.1 60.621 419 152 5 192 600 500 915 8.34e-171 512
Msa0932450 AT2G26700.1 46.767 464 190 8 194 602 23 484 2.46e-133 401
Msa0932450 AT3G44610.1 54.795 365 130 8 252 593 71 423 5.01e-128 385
Msa0932450 AT2G34650.1 48.284 408 179 9 225 622 50 435 7.54e-124 374
Msa0932450 AT5G58140.6 45.758 389 165 4 226 612 551 895 2.03e-109 351
Msa0932450 AT5G58140.7 45.758 389 165 4 226 612 551 895 2.03e-109 351
Msa0932450 AT5G58140.5 45.758 389 165 4 226 612 551 895 2.03e-109 351
Msa0932450 AT5G58140.2 45.758 389 165 4 226 612 551 895 2.03e-109 351
Msa0932450 AT5G58140.1 45.758 389 165 4 226 612 551 895 2.03e-109 351
Msa0932450 AT5G58140.3 47.139 367 150 3 226 592 551 873 3.83e-107 344
Msa0932450 AT3G14370.1 43.590 390 181 6 227 607 61 420 1.13e-105 328
Msa0932450 AT3G45780.2 46.400 375 159 4 225 599 636 968 7.59e-99 324
Msa0932450 AT3G45780.1 46.400 375 159 4 225 599 636 968 7.59e-99 324
Msa0932450 AT1G53700.1 40.695 403 197 6 227 619 66 436 1.51e-97 307
Msa0932450 AT3G20830.1 39.071 366 191 9 246 600 15 359 4.40e-71 236
Msa0932450 AT1G51170.1 38.356 365 191 10 247 600 17 358 7.08e-71 235
Msa0932450 AT3G25250.1 34.986 363 200 8 247 600 12 347 3.27e-66 223
Msa0932450 AT4G13000.1 34.435 363 192 9 247 600 15 340 1.22e-65 220
Msa0932450 AT5G62310.1 34.160 363 181 10 252 610 754 1062 2.52e-53 198
Msa0932450 AT1G45160.2 35.393 356 179 8 247 598 665 973 7.68e-53 196
Msa0932450 AT1G45160.1 35.393 356 179 8 247 598 665 973 1.07e-52 196
Msa0932450 AT1G48490.3 33.819 343 177 7 247 588 823 1116 5.28e-52 194
Msa0932450 AT1G48490.2 33.819 343 177 7 247 588 823 1116 5.28e-52 194
Msa0932450 AT1G48490.1 33.819 343 177 7 247 588 823 1116 5.28e-52 194
Msa0932450 AT1G48490.4 33.819 343 177 7 247 588 824 1117 5.33e-52 194
Msa0932450 AT3G17850.1 34.311 341 180 8 249 588 879 1176 1.46e-51 193
Msa0932450 AT1G30640.3 30.081 369 222 10 237 601 12 348 4.45e-49 178
Msa0932450 AT5G09890.2 31.161 353 206 8 240 588 90 409 6.51e-49 179
Msa0932450 AT5G09890.1 31.161 353 206 8 240 588 90 409 7.06e-49 179
Msa0932450 AT1G30640.2 30.081 369 222 8 237 601 105 441 7.67e-49 180
Msa0932450 AT1G30640.1 30.081 369 222 8 237 601 105 441 7.67e-49 180
Msa0932450 AT4G33080.2 30.688 378 224 10 231 599 73 421 3.36e-48 177
Msa0932450 AT4G33080.1 30.688 378 224 10 231 599 73 421 3.52e-48 177
Msa0932450 AT2G20470.3 30.790 367 208 9 240 600 112 438 4.04e-45 169
Msa0932450 AT2G20470.2 30.790 367 208 9 240 600 112 438 6.24e-45 169
Msa0932450 AT2G20470.1 30.790 367 208 9 240 600 112 438 6.24e-45 169
Msa0932450 AT4G14350.3 28.434 415 239 11 195 601 72 436 9.25e-45 168
Msa0932450 AT4G14350.2 28.434 415 239 11 195 601 72 436 1.04e-44 168
Msa0932450 AT4G14350.1 28.434 415 239 11 195 601 72 436 1.04e-44 168
Msa0932450 AT4G14350.4 28.434 415 239 11 195 601 72 436 1.04e-44 168
Msa0932450 AT3G23310.1 30.411 365 210 8 231 588 99 426 3.74e-44 167
Msa0932450 AT1G03920.1 29.612 412 236 9 195 599 90 454 1.70e-43 165
Msa0932450 AT1G03920.3 29.612 412 236 9 195 599 90 454 1.70e-43 165
Msa0932450 AT1G03920.2 31.549 355 199 7 252 599 24 341 2.09e-43 162
Msa0932450 AT2G19400.1 29.041 365 223 10 231 588 84 419 5.47e-41 157
Msa0932450 AT5G58140.4 48.855 131 67 0 226 356 551 681 2.83e-33 136
Msa0932450 AT3G08730.1 30.224 268 147 6 132 399 52 279 4.66e-28 118
Msa0932450 AT3G08730.1 45.133 113 58 3 477 588 285 394 5.42e-24 106
Msa0932450 AT3G08730.2 30.224 268 147 6 132 399 52 279 4.66e-28 118
Msa0932450 AT3G08730.2 45.133 113 58 3 477 588 285 394 5.42e-24 106
Msa0932450 AT3G08720.1 38.710 155 93 1 245 399 133 285 1.20e-27 117
Msa0932450 AT3G08720.1 45.133 113 58 3 477 588 291 400 1.01e-23 105
Msa0932450 AT3G08720.3 38.710 155 93 1 245 399 133 285 1.20e-27 117
Msa0932450 AT3G08720.3 45.133 113 58 3 477 588 291 400 1.01e-23 105
Msa0932450 AT3G08720.4 38.710 155 93 1 245 399 133 285 1.20e-27 117
Msa0932450 AT3G08720.4 45.133 113 58 3 477 588 291 400 1.01e-23 105
Msa0932450 AT3G08720.2 38.710 155 93 1 245 399 133 285 1.20e-27 117
Msa0932450 AT3G08720.2 45.133 113 58 3 477 588 291 400 1.01e-23 105
Msa0932450 AT5G04510.3 39.310 145 86 2 252 396 44 186 1.65e-24 104
Msa0932450 AT5G04510.2 39.310 145 86 2 252 396 44 186 2.33e-24 106
Msa0932450 AT5G04510.2 34.307 137 84 3 464 599 196 327 2.10e-17 85.5
Msa0932450 AT5G04510.1 39.310 145 86 2 252 396 44 186 4.11e-24 106
Msa0932450 AT5G04510.1 34.307 137 84 3 464 599 196 327 2.12e-17 85.9
Msa0932450 AT2G25090.1 26.190 336 174 10 252 584 15 279 1.52e-22 101
Msa0932450 AT3G10540.1 36.076 158 99 2 239 396 32 187 1.62e-22 101
Msa0932450 AT3G10540.1 33.577 137 85 3 464 599 197 328 9.53e-17 84.0
Msa0932450 AT5G18700.1 37.748 151 86 3 249 399 1 143 1.17e-20 97.8
Msa0932450 AT5G57630.2 26.241 282 128 6 245 523 5 209 3.32e-20 94.0
Msa0932450 AT5G57630.1 26.241 282 128 6 245 523 5 209 4.26e-20 93.6
Msa0932450 AT5G25110.1 25.706 354 180 11 235 587 31 302 1.43e-19 92.8
Msa0932450 AT2G45490.2 28.571 231 154 6 244 467 14 240 1.84e-19 89.0
Msa0932450 AT2G45490.2 38.824 85 52 0 476 560 170 254 5.12e-13 70.1
Msa0932450 AT2G45490.1 27.170 265 172 8 244 491 14 274 2.39e-19 89.4
Msa0932450 AT2G45490.1 37.097 124 67 2 476 599 170 282 1.07e-18 87.4
Msa0932450 AT3G01090.3 24.850 334 172 9 251 584 18 272 5.59e-19 91.3
Msa0932450 AT3G01090.1 24.850 334 172 9 251 584 18 272 5.59e-19 91.3
Msa0932450 AT2G25880.1 33.735 166 108 1 235 400 8 171 5.61e-19 88.2
Msa0932450 AT2G25880.1 37.963 108 63 1 476 583 173 276 6.07e-16 79.3
Msa0932450 AT2G25880.4 33.735 166 108 1 235 400 21 184 5.82e-19 88.6
Msa0932450 AT2G25880.4 37.963 108 63 1 476 583 186 289 5.97e-16 79.7
Msa0932450 AT4G32830.1 34.868 152 97 1 249 400 28 177 5.84e-19 88.2
Msa0932450 AT4G32830.1 33.333 126 73 2 476 601 179 293 2.34e-15 77.8
Msa0932450 AT3G01090.2 24.850 334 172 9 251 584 41 295 6.04e-19 91.3
Msa0932450 AT3G61960.1 25.228 329 165 11 249 571 7 260 6.39e-19 91.3
Msa0932450 AT3G61960.2 25.228 329 165 11 249 571 7 260 6.68e-19 91.3
Msa0932450 AT2G25880.3 33.735 166 108 1 235 400 69 232 1.01e-18 88.6
Msa0932450 AT2G25880.3 38.318 107 62 1 476 582 234 336 1.84e-15 79.0
Msa0932450 AT1G12680.1 34.194 155 90 5 256 408 111 255 5.21e-18 87.8
Msa0932450 AT2G30360.1 26.254 339 167 10 249 583 18 277 8.95e-18 86.7
Msa0932450 AT5G10930.1 25.776 322 163 9 250 569 10 257 9.30e-18 86.7
Msa0932450 AT1G50240.3 24.398 332 170 10 252 583 6 256 2.16e-17 87.4
Msa0932450 AT1G50240.2 24.398 332 170 10 252 583 6 256 2.16e-17 87.4
Msa0932450 AT3G29160.3 23.433 367 201 10 251 617 19 305 2.24e-17 84.7
Msa0932450 AT2G20050.2 37.931 116 66 3 479 591 931 1043 2.77e-17 86.7
Msa0932450 AT2G20050.1 37.931 116 66 3 479 591 934 1046 2.82e-17 86.7
Msa0932450 AT4G18700.1 32.026 153 101 1 247 399 21 170 4.67e-17 85.1
Msa0932450 AT4G24400.1 29.697 165 114 2 248 412 5 167 5.05e-17 84.7
Msa0932450 AT3G29160.1 23.433 367 201 10 251 617 19 305 6.62e-17 84.7
Msa0932450 AT3G29160.2 23.433 367 201 10 251 617 19 305 6.62e-17 84.7
Msa0932450 AT4G24400.2 29.697 165 114 2 248 412 5 167 7.25e-17 84.0
Msa0932450 AT3G17510.1 33.333 159 103 3 241 399 10 165 7.79e-17 84.0
Msa0932450 AT5G45810.1 30.719 153 103 1 247 399 23 172 1.17e-16 83.6
Msa0932450 AT2G34180.1 26.224 286 134 9 241 523 46 257 1.76e-16 83.2
Msa0932450 AT2G38490.1 37.255 153 87 4 250 399 26 172 2.66e-16 82.0
Msa0932450 AT5G45820.1 30.573 157 106 2 243 399 3 156 3.08e-16 82.0
Msa0932450 AT2G25880.2 37.963 108 63 1 476 583 141 244 3.96e-16 79.3
Msa0932450 AT4G14580.1 24.695 328 170 11 245 569 14 267 1.07e-15 80.1
Msa0932450 AT1G29230.1 30.719 153 99 2 249 399 71 218 1.37e-15 80.5
Msa0932450 AT5G28290.3 29.870 154 102 3 249 399 1 151 1.43e-15 80.5
Msa0932450 AT5G28290.1 29.870 154 102 3 249 399 1 151 1.47e-15 80.5
Msa0932450 AT5G28290.2 29.870 154 102 3 249 399 1 151 1.47e-15 80.5
Msa0932450 AT3G44200.2 27.922 154 105 3 249 399 5 155 2.32e-15 80.5
Msa0932450 AT3G44200.1 27.922 154 105 3 249 399 5 155 2.32e-15 80.5
Msa0932450 AT3G04810.2 28.571 154 104 3 249 399 1 151 2.50e-15 80.1
Msa0932450 AT3G04810.1 28.571 154 104 3 249 399 1 151 2.50e-15 80.1
Msa0932450 AT3G04810.3 28.571 154 104 3 249 399 1 151 2.50e-15 80.1
Msa0932450 AT5G21326.1 32.680 153 97 4 249 399 10 158 4.72e-15 78.6
Msa0932450 AT3G20860.1 25.166 151 112 1 249 399 1 150 5.64e-15 77.8
Msa0932450 AT1G54510.4 27.922 154 105 3 249 399 1 151 6.35e-15 78.6
Msa0932450 AT1G54510.2 27.922 154 105 3 249 399 1 151 6.35e-15 78.6
Msa0932450 AT1G54510.1 27.922 154 105 3 249 399 1 151 6.35e-15 78.6
Msa0932450 AT1G54510.3 27.922 154 105 3 249 399 1 151 6.35e-15 78.6
Msa0932450 AT5G58380.1 21.557 334 183 8 252 584 12 267 7.08e-15 78.2
Msa0932450 AT3G63280.4 28.025 157 107 3 246 399 52 205 8.65e-15 78.2
Msa0932450 AT3G63280.2 28.571 154 104 3 249 399 1 151 9.17e-15 78.2
Msa0932450 AT3G63280.3 28.571 154 104 3 249 399 1 151 9.17e-15 78.2
Msa0932450 AT3G63280.1 28.571 154 104 3 249 399 1 151 9.17e-15 78.2
Msa0932450 AT2G26980.2 31.098 164 102 5 238 399 5 159 1.01e-14 75.1
Msa0932450 AT3G21220.2 23.881 335 167 12 255 583 73 325 1.07e-14 76.3
Msa0932450 AT3G21220.1 23.881 335 167 12 255 583 73 325 1.07e-14 76.3
Msa0932450 AT5G01810.3 33.333 159 99 4 243 399 3 156 1.25e-14 76.6
Msa0932450 AT5G35410.2 29.221 154 107 2 246 399 5 156 1.25e-14 76.6
Msa0932450 AT3G06030.1 29.126 206 123 6 233 432 59 247 1.32e-14 77.8
Msa0932450 AT5G01810.1 33.333 159 99 4 243 399 3 156 1.38e-14 76.6
Msa0932450 AT5G01810.2 33.333 159 99 4 243 399 3 156 1.38e-14 76.6
Msa0932450 AT2G26980.1 31.098 164 102 5 238 399 5 159 1.52e-14 76.3
Msa0932450 AT2G26980.3 31.098 164 102 5 238 399 5 159 1.73e-14 76.6
Msa0932450 AT1G35670.1 31.818 154 99 4 251 400 25 176 1.74e-14 77.0
Msa0932450 AT2G26980.4 31.098 164 102 5 238 399 15 169 1.86e-14 76.6
Msa0932450 AT5G01820.1 35.849 159 94 5 243 399 14 166 2.11e-14 76.3
Msa0932450 AT1G54960.1 32.530 166 93 6 240 399 66 218 2.18e-14 77.0
Msa0932450 AT1G54960.2 32.530 166 93 6 240 399 66 218 2.18e-14 77.0
Msa0932450 AT2G26980.5 31.098 164 102 5 238 399 5 159 2.54e-14 75.9
Msa0932450 AT5G35410.1 29.221 154 107 2 246 399 5 156 2.88e-14 75.9
Msa0932450 AT5G39440.1 33.557 149 97 2 251 399 18 164 4.12e-14 75.9
Msa0932450 AT5G39440.1 37.624 101 57 3 485 585 178 272 9.32e-11 65.1
Msa0932450 AT1G01140.3 29.341 167 111 3 233 399 5 164 5.24e-14 75.1
Msa0932450 AT1G69220.1 30.323 155 99 3 252 403 249 397 5.88e-14 75.9
Msa0932450 AT1G01140.2 29.341 167 111 3 233 399 5 164 5.88e-14 75.1
Msa0932450 AT1G01140.1 29.341 167 111 3 233 399 5 164 5.99e-14 75.1
Msa0932450 AT1G09000.2 28.774 212 130 8 252 450 69 272 6.86e-14 75.5
Msa0932450 AT1G53570.6 29.412 187 119 5 256 439 218 394 8.06e-14 75.1
Msa0932450 AT1G09000.1 28.774 212 130 8 252 450 69 272 8.32e-14 75.1
Msa0932450 AT1G53570.7 29.412 187 119 5 256 439 218 394 8.44e-14 74.7
Msa0932450 AT1G30270.1 29.412 153 102 3 249 399 28 176 1.03e-13 74.3
Msa0932450 AT1G53570.1 29.412 187 119 5 256 439 218 394 1.05e-13 74.7
Msa0932450 AT1G53570.2 29.412 187 119 5 256 439 218 394 1.06e-13 74.7
Msa0932450 AT1G53570.3 29.412 187 119 5 256 439 218 394 1.06e-13 74.7
Msa0932450 AT1G53570.4 29.412 187 119 5 256 439 218 394 1.08e-13 74.7
Msa0932450 AT1G30270.2 29.412 153 102 3 249 399 28 176 1.16e-13 74.3
Msa0932450 AT3G23000.1 31.013 158 94 4 249 399 22 171 1.38e-13 73.6
Msa0932450 AT1G48260.1 32.026 153 102 2 247 399 6 156 2.28e-13 73.2
Msa0932450 AT4G09570.1 31.818 154 99 4 251 400 24 175 2.50e-13 73.2
Msa0932450 AT4G26070.1 30.460 174 114 5 240 411 56 224 3.55e-13 71.2
Msa0932450 AT2G17890.1 29.834 181 114 5 252 427 108 280 3.57e-13 73.2
Msa0932450 AT4G26070.4 30.516 213 124 8 214 411 20 223 3.61e-13 72.0
Msa0932450 AT3G10660.2 30.556 180 112 5 252 427 186 356 4.07e-13 73.2
Msa0932450 AT3G10660.1 30.556 180 112 5 252 427 186 356 4.07e-13 73.2
Msa0932450 AT5G45430.2 29.947 187 113 7 249 432 1 172 4.07e-13 72.8
Msa0932450 AT5G45430.1 29.947 187 113 7 249 432 1 172 4.20e-13 72.4
Msa0932450 AT4G26070.5 30.460 174 114 5 240 411 43 211 4.80e-13 71.2
Msa0932450 AT4G26070.2 30.460 174 114 5 240 411 56 224 5.57e-13 71.2
Msa0932450 AT4G26070.3 30.460 174 114 5 240 411 56 224 5.57e-13 71.2
Msa0932450 AT4G19110.2 28.649 185 118 5 249 432 1 172 5.76e-13 72.0
Msa0932450 AT1G50700.3 33.333 153 96 4 252 400 73 223 6.68e-13 72.0
Msa0932450 AT4G19110.1 28.649 185 118 5 249 432 1 172 7.30e-13 71.6
Msa0932450 AT1G50700.1 33.333 153 96 4 252 400 73 223 1.05e-12 71.2
Msa0932450 AT1G50700.2 33.333 153 96 4 252 400 73 223 1.28e-12 71.2
Msa0932450 AT1G32320.1 31.034 145 92 2 255 399 51 187 1.70e-12 69.3
Msa0932450 AT4G04720.2 29.677 155 99 4 252 400 80 230 1.87e-12 70.5
Msa0932450 AT4G04720.1 29.677 155 99 4 252 400 80 230 1.87e-12 70.5
Msa0932450 AT3G20410.2 32.026 153 98 4 252 400 91 241 2.10e-12 70.5
Msa0932450 AT3G20410.1 32.026 153 98 4 252 400 91 241 2.10e-12 70.5
Msa0932450 AT1G53165.2 28.105 153 106 2 251 403 14 162 2.11e-12 70.9
Msa0932450 AT1G53165.1 28.105 153 106 2 251 403 14 162 2.12e-12 70.9
Msa0932450 AT1G53165.3 28.105 153 106 2 251 403 14 162 2.17e-12 70.9
Msa0932450 AT2G35890.2 27.119 236 150 8 203 427 78 302 2.44e-12 70.1
Msa0932450 AT2G35890.1 27.119 236 150 8 203 427 78 302 2.44e-12 70.1
Msa0932450 AT4G35310.2 27.869 183 123 5 252 432 97 272 3.74e-12 69.7
Msa0932450 AT4G35310.1 27.869 183 123 5 252 432 97 272 3.74e-12 69.7
Msa0932450 AT4G30960.1 29.677 155 105 3 245 399 18 168 3.90e-12 69.3
Msa0932450 AT2G41860.1 32.026 153 98 4 252 400 54 204 4.28e-12 69.3
Msa0932450 AT2G41860.2 32.026 153 98 4 252 400 54 204 4.28e-12 69.3
Msa0932450 AT1G12580.1 27.434 226 146 7 207 427 2 214 4.32e-12 69.3
Msa0932450 AT1G69220.2 30.137 146 93 3 261 403 231 370 5.67e-12 69.7
Msa0932450 AT2G38910.1 29.609 179 115 6 252 427 134 304 7.84e-12 68.9
Msa0932450 AT5G04870.1 30.000 180 113 5 252 427 150 320 1.20e-11 68.2
Msa0932450 AT2G41140.1 29.032 186 113 6 251 427 122 297 1.21e-11 68.2
Msa0932450 AT1G73500.1 29.630 162 97 5 255 413 50 197 1.42e-11 66.6
Msa0932450 AT5G24430.1 25.946 185 122 5 250 427 141 317 1.42e-11 67.8
Msa0932450 AT3G57530.2 33.557 149 93 4 256 400 67 213 1.76e-11 67.0
Msa0932450 AT3G56760.1 31.288 163 102 5 251 406 123 282 1.92e-11 67.4
Msa0932450 AT5G57565.2 32.520 123 72 3 311 429 14 129 2.01e-11 62.4
Msa0932450 AT5G57565.6 32.520 123 72 3 311 429 14 129 2.01e-11 62.4
Msa0932450 AT2G31500.1 34.228 149 92 4 256 400 70 216 2.20e-11 67.4
Msa0932450 AT3G57530.1 33.557 149 93 4 256 400 67 213 2.68e-11 67.0
Msa0932450 AT1G63700.1 23.707 232 156 4 240 452 388 617 2.71e-11 67.4
Msa0932450 AT1G63700.2 23.707 232 156 4 240 452 388 617 2.71e-11 67.4
Msa0932450 AT4G10010.2 33.775 151 93 5 252 399 156 302 2.79e-11 67.0
Msa0932450 AT4G36070.1 27.473 182 119 5 251 427 70 243 3.01e-11 66.6
Msa0932450 AT2G17290.1 29.936 157 106 4 252 406 85 239 3.37e-11 66.6
Msa0932450 AT2G17290.2 29.936 157 106 4 252 406 85 239 3.37e-11 66.6
Msa0932450 AT1G78290.3 32.258 155 93 5 249 399 1 147 3.47e-11 65.5
Msa0932450 AT1G78290.2 32.258 155 93 5 249 399 1 147 3.47e-11 65.5
Msa0932450 AT5G66210.3 27.072 181 121 3 251 427 61 234 3.64e-11 66.2
Msa0932450 AT4G36070.2 27.473 182 119 5 251 427 70 243 3.81e-11 66.6
Msa0932450 AT5G19360.1 31.373 153 99 4 252 400 68 218 3.86e-11 66.2
Msa0932450 AT5G66210.6 27.072 181 121 3 251 427 61 234 4.12e-11 65.9
Msa0932450 AT5G66210.4 27.072 181 121 3 251 427 61 234 4.12e-11 65.9
Msa0932450 AT5G66210.5 27.072 181 121 3 251 427 61 234 4.33e-11 66.2
Msa0932450 AT5G12180.1 31.373 153 99 4 252 400 73 223 4.93e-11 66.2
Msa0932450 AT3G05050.3 30.405 148 102 1 252 399 138 284 5.36e-11 66.2
Msa0932450 AT3G05050.2 30.405 148 102 1 252 399 138 284 5.36e-11 66.2
Msa0932450 AT3G05050.1 30.405 148 102 1 252 399 138 284 5.36e-11 66.2
Msa0932450 AT5G66210.1 27.072 181 121 3 251 427 61 234 5.42e-11 65.9
Msa0932450 AT5G66210.2 27.072 181 121 3 251 427 61 234 5.42e-11 65.9
Msa0932450 AT3G15220.1 26.623 154 109 2 250 403 13 162 6.05e-11 66.2
Msa0932450 AT5G12480.1 29.870 154 102 4 251 400 58 209 6.42e-11 65.9
Msa0932450 AT4G29810.1 29.121 182 116 5 235 411 53 226 7.37e-11 64.7
Msa0932450 AT1G66750.1 34.211 152 89 6 253 399 12 157 8.36e-11 64.7
Msa0932450 AT4G29810.2 29.121 182 116 5 235 411 62 235 8.38e-11 64.7
Msa0932450 AT1G73690.1 33.775 151 91 5 253 399 10 155 8.44e-11 64.7
Msa0932450 AT5G19450.2 30.719 153 100 4 252 400 57 207 8.75e-11 65.5
Msa0932450 AT5G19450.1 30.719 153 100 4 252 400 57 207 8.75e-11 65.5
Msa0932450 AT4G29810.3 29.121 182 116 5 235 411 62 235 8.96e-11 64.3
Msa0932450 AT5G23580.1 31.333 150 97 4 258 403 28 175 9.24e-11 65.1
Msa0932450 AT3G49370.1 28.834 163 103 5 244 399 139 295 9.92e-11 65.1

Find 136 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTGGCTGACTGTCTT+AGG 0.142901 6_3:+609219 Msa0932450:CDS
ATGTTGTTGGGCAGCCTTTA+AGG 0.173778 6_3:+608376 Msa0932450:CDS
TCCTTGATTATTTCTATATA+AGG 0.186285 6_3:-606072 None:intergenic
CCTTCACCTTTGATAATTTC+AGG 0.209471 6_3:-608249 None:intergenic
TTATGTTGTTCCAGGTTTCT+TGG 0.220916 6_3:+609205 Msa0932450:intron
GGAGATTCTGGAAACCTTAA+AGG 0.266914 6_3:-608390 None:intergenic
CGAACACCATTCAAAGGTTC+TGG 0.282954 6_3:+608333 Msa0932450:CDS
AGACATTATCATCATAATTA+TGG 0.289252 6_3:+606128 Msa0932450:CDS
GAATGGATGTTGTTTGATTT+CGG 0.318757 6_3:-608499 None:intergenic
AAGCTGACAGTAGGAGATTC+TGG 0.319263 6_3:-608402 None:intergenic
CTTATATCATTTGCCTTATG+AGG 0.331403 6_3:-606629 None:intergenic
TCTATAGGCAAGACGGTGTT+GGG 0.334697 6_3:-608466 None:intergenic
TGCAGAAGTTCTGCTTGCTT+TGG 0.345070 6_3:+607849 Msa0932450:CDS
TCGCGAGGGGATGTTGGAAA+TGG 0.346924 6_3:+606679 Msa0932450:CDS
TTTCTTGGCTGACTGTCTTA+GGG 0.351781 6_3:+609220 Msa0932450:CDS
CCTTGATTATTTCTATATAA+GGG 0.352324 6_3:-606071 None:intergenic
TCTGGCTGCATTGCACATGC+TGG 0.356299 6_3:-608054 None:intergenic
CGCGAGGGGATGTTGGAAAT+GGG 0.363431 6_3:+606680 Msa0932450:CDS
TTCTTATACGAACTCTTGTT+TGG 0.364317 6_3:+608309 Msa0932450:CDS
CATTCTTTCACAATGTGAAC+TGG 0.366931 6_3:+608517 Msa0932450:CDS
CGGGGAATCCCTGATGTTAT+AGG 0.370257 6_3:-606035 None:intergenic
AGATTGGGAAGTGGAGATAT+AGG 0.370938 6_3:+606722 Msa0932450:CDS
ACAACGATGTTTAATGTTGT+TGG 0.374481 6_3:+608363 Msa0932450:CDS
TAAGGGAGGCCGCGAAGAAC+GGG 0.378316 6_3:-606054 None:intergenic
TAACTACATAGCTGTTTAGA+TGG 0.380890 6_3:-606166 None:intergenic
AGTGAGTGTGTGAGTGTTGA+TGG 0.390003 6_3:+606467 Msa0932450:CDS
GAAGTTGGAATGAACCCTTC+TGG 0.395335 6_3:+608615 Msa0932450:CDS
GTTGGCTCTGCGACTAGCTC+AGG 0.397789 6_3:-608180 None:intergenic
CAGAACCTTTGAATGGTGTT+CGG 0.404895 6_3:-608332 None:intergenic
CTGTGGATTGGTGGACGTTC+GGG 0.406089 6_3:+608283 Msa0932450:CDS
GCTGTGGATTGGTGGACGTT+CGG 0.420545 6_3:+608282 Msa0932450:CDS
TTCGGTAGCTCCGCGTCTAT+AGG 0.426540 6_3:-608481 None:intergenic
TCATTAAAATCACTGAAATT+CGG 0.427397 6_3:-606515 None:intergenic
TACTGTCAGCTTTGCTGCAA+GGG 0.433649 6_3:+608413 Msa0932450:CDS
CAACGATGTTTAATGTTGTT+GGG 0.434948 6_3:+608364 Msa0932450:CDS
GTCTATAGGCAAGACGGTGT+TGG 0.435613 6_3:-608467 None:intergenic
CGATTCCCAGAACCTTTGAA+TGG 0.437224 6_3:-608339 None:intergenic
TTGGAGTACTTGCACATGCT+TGG 0.440491 6_3:+607868 Msa0932450:CDS
GACATTGACCGCGCACTTGT+TGG 0.440756 6_3:-608198 None:intergenic
TTCATCATCATGGTCTGTCT+TGG 0.441424 6_3:-608573 None:intergenic
TTTAGAATATTGAAGAGATT+GGG 0.441585 6_3:+606707 Msa0932450:CDS
GACACTCTCTTGCTTGGTAA+TGG 0.442984 6_3:+606919 Msa0932450:CDS
GGTACTCCCTCTACAGATAC+TGG 0.445373 6_3:-606549 None:intergenic
TGAGTTTGGTTTCATCATCA+TGG 0.445934 6_3:-608583 None:intergenic
GACTGAGAATAGTAATTCTT+CGG 0.446631 6_3:-606353 None:intergenic
TTCATCGCTAACATCACTTC+CGG 0.448222 6_3:-606570 None:intergenic
TGTAGGCACACACGAGTACT+TGG 0.448323 6_3:+608224 Msa0932450:CDS
GCTCAGGGAGAGGTGTCATT+TGG 0.450141 6_3:-608164 None:intergenic
CACAGCCTTCCTATAACATC+AGG 0.452461 6_3:+606026 Msa0932450:CDS
AAGAAACAATGAAAGGTTGC+CGG 0.455081 6_3:+606211 Msa0932450:CDS
AACTCAACTGAAAATGAAGT+TGG 0.456517 6_3:+608600 Msa0932450:CDS
ATAGTTTCAACTGCAGTCAT+AGG 0.457366 6_3:-605963 None:intergenic
TGCTGGCTGAATGCAGTATC+CGG 0.457718 6_3:-608037 None:intergenic
TGCTTTGTATAAACCTCATA+AGG 0.460243 6_3:+606616 Msa0932450:CDS
GCAATCAGGCAAAGACAACC+TGG 0.462233 6_3:+606968 Msa0932450:CDS
GTGGCGACCTTCATGCAATC+AGG 0.465958 6_3:+606954 Msa0932450:CDS
GCGCGGTCAATGTCCTTTGT+AGG 0.466444 6_3:+608207 Msa0932450:CDS
TTTGTTGACTTCACTAGAGT+TGG 0.473963 6_3:-607991 None:intergenic
ATGGTCTGTCTTGGTACCTC+TGG 0.474291 6_3:-608564 None:intergenic
ATAAGGCAAATGATATAAGA+TGG 0.476777 6_3:+606633 Msa0932450:CDS
TTAACAACGGCTCGTTTCGA+TGG 0.483495 6_3:-606326 None:intergenic
GTATATCTAGCTGAACTTAG+TGG 0.485543 6_3:+606749 Msa0932450:CDS
GACTGAGACACTCTCTTGCT+TGG 0.489683 6_3:+606913 Msa0932450:CDS
AGGAAAACCAGTATCTGTAG+AGG 0.497846 6_3:+606542 Msa0932450:CDS
CTACTGTCAGCTTTGCTGCA+AGG 0.509881 6_3:+608412 Msa0932450:CDS
ATCACTGAAACTAAAAGCTC+CGG 0.510058 6_3:+608018 Msa0932450:CDS
CCGAGCTCGCGAGGGGATGT+TGG 0.511381 6_3:+606673 Msa0932450:CDS
CAGGGATTCCCCGTTCTTCG+CGG 0.512241 6_3:+606045 Msa0932450:CDS
CTTCTTACGAGTTGCAAGCT+CGG 0.513729 6_3:-606810 None:intergenic
AAAACAAACTAAGACAACTT+AGG 0.515460 6_3:-609266 None:intergenic
CATGCATGTTGGATGCAGTC+TGG 0.515667 6_3:-608072 None:intergenic
GTCTTTGCCTGATTGCATGA+AGG 0.516240 6_3:-606961 None:intergenic
CAGTTCACATTGTGAAAGAA+TGG 0.524170 6_3:-608516 None:intergenic
CCAACATCCCCTCGCGAGCT+CGG 0.527137 6_3:-606673 None:intergenic
TAGTAACTGTTCTGAGGACT+AGG 0.528414 6_3:-606392 None:intergenic
TCAAAGTGGGTATATAATGT+AGG 0.528535 6_3:-606890 None:intergenic
ACACTCACTGACTTCAGTAC+TGG 0.535887 6_3:-606453 None:intergenic
TCAAGCTGTCCGAGCTCGCG+AGG 0.536729 6_3:+606664 Msa0932450:CDS
ATAAGGGAGGCCGCGAAGAA+CGG 0.539279 6_3:-606055 None:intergenic
GGTTCAGAATTCAGTTTCTG+AGG 0.551440 6_3:+605992 Msa0932450:CDS
ATATTGAAGAGATTGGGAAG+TGG 0.554065 6_3:+606713 Msa0932450:CDS
ATTCTAAATAATTACCAGAA+GGG 0.554776 6_3:-608629 None:intergenic
CCCTTATATAGAAATAATCA+AGG 0.559154 6_3:+606071 Msa0932450:CDS
TAAGGCAAATGATATAAGAT+GGG 0.559236 6_3:+606634 Msa0932450:CDS
ATGGAAGTGCTGTGGATTGG+TGG 0.563144 6_3:+608274 Msa0932450:CDS
GAACACCATTCAAAGGTTCT+GGG 0.567648 6_3:+608334 Msa0932450:CDS
TTTGGCCGAACACCATTCAA+AGG 0.568709 6_3:+608327 Msa0932450:CDS
ATAGGAAGGCTGTGGCGTAT+CGG 0.571857 6_3:-606017 None:intergenic
ATTGCATGAAGGTCGCCACC+AGG 0.579987 6_3:-606950 None:intergenic
ATTATCAAAGGTGAAGGACA+TGG 0.585663 6_3:+608255 Msa0932450:CDS
GAAGCTACTGAGGGCTCAGA+CGG 0.588647 6_3:+606829 Msa0932450:CDS
ATTCTTTCACAATGTGAACT+GGG 0.590369 6_3:+608518 Msa0932450:CDS
GACATGGAAGTGCTGTGGAT+TGG 0.591538 6_3:+608271 Msa0932450:CDS
GTCTGTCTTGGTACCTCTGG+CGG 0.591624 6_3:-608561 None:intergenic
GGAAAACCAGTATCTGTAGA+GGG 0.593884 6_3:+606543 Msa0932450:CDS
TTGGCTCTGCGACTAGCTCA+GGG 0.594167 6_3:-608179 None:intergenic
GCTGCAAGGGACTTGATCAG+AGG 0.595287 6_3:+608426 Msa0932450:CDS
GCGAGGGGATGTTGGAAATG+GGG 0.597867 6_3:+606681 Msa0932450:CDS
CCTGAAATTATCAAAGGTGA+AGG 0.598793 6_3:+608249 Msa0932450:CDS
AGTATCTGTAGAGGGAGTAC+CGG 0.600565 6_3:+606551 Msa0932450:CDS
TTCTTGGCTGACTGTCTTAG+GGG 0.601605 6_3:+609221 Msa0932450:CDS
TGCAGTTGAAACTATTGCAG+AGG 0.606600 6_3:+605971 Msa0932450:CDS
ATCACGAAAGAAACAATGAA+AGG 0.611280 6_3:+606204 Msa0932450:CDS
ATTCTTCGGTTGATTAACAA+CGG 0.617928 6_3:-606339 None:intergenic
AAGCTGTCCGAGCTCGCGAG+GGG 0.618922 6_3:+606666 Msa0932450:CDS
CACCGTCTTGCCTATAGACG+CGG 0.620769 6_3:+608471 Msa0932450:CDS
CAACTCGTAAGAAGCTACTG+AGG 0.620806 6_3:+606819 Msa0932450:CDS
CAAGCTGTCCGAGCTCGCGA+GGG 0.623020 6_3:+606665 Msa0932450:CDS
TGATTATTTCTATATAAGGG+AGG 0.623039 6_3:-606068 None:intergenic
TTGGCGCCTGAAATTATCAA+AGG 0.624538 6_3:+608243 Msa0932450:CDS
TTTCGCTTCTGAATAGACAG+TGG 0.629335 6_3:-606420 None:intergenic
CTTGCAGCAAAGCTGACAGT+AGG 0.631317 6_3:-608411 None:intergenic
AATGTGTTGGTGAGAGAAGA+CGG 0.638684 6_3:+607919 Msa0932450:CDS
TCTGCGACTAGCTCAGGGAG+AGG 0.639914 6_3:-608174 None:intergenic
AACTCGTAAGAAGCTACTGA+GGG 0.642428 6_3:+606820 Msa0932450:CDS
GAATCCCTGATGTTATAGGA+AGG 0.643848 6_3:-606031 None:intergenic
CTTCACTAGAGTTGGACTGA+CGG 0.644980 6_3:-607983 None:intergenic
AGAGTGTCTCAGTCTCAAAG+TGG 0.650439 6_3:-606904 None:intergenic
CTGATGTTATAGGAAGGCTG+TGG 0.652569 6_3:-606025 None:intergenic
GAGTGTCTCAGTCTCAAAGT+GGG 0.652922 6_3:-606903 None:intergenic
GCTGAATAGTAACTGTTCTG+AGG 0.653333 6_3:-606398 None:intergenic
CCTTAAGCCTGAAAATGTGT+TGG 0.653684 6_3:+607906 Msa0932450:CDS
CTATAGGCAAGACGGTGTTG+GGG 0.657836 6_3:-608465 None:intergenic
GTACTCGTGTGTGCCTACAA+AGG 0.659826 6_3:-608220 None:intergenic
AAGGGAGGCCGCGAAGAACG+GGG 0.663699 6_3:-606053 None:intergenic
CAATCAGGCAAAGACAACCT+GGG 0.663791 6_3:+606969 Msa0932450:CDS
CCGCTGCGCTAATCCGCCAG+AGG 0.665665 6_3:+608548 Msa0932450:CDS
TGAAGGACATGGAAGTGCTG+TGG 0.668077 6_3:+608266 Msa0932450:CDS
TAGCTGAACTTAGTGGCACA+AGG 0.668425 6_3:+606756 Msa0932450:CDS
GTGGCGAAAAGCATGCATGT+TGG 0.669257 6_3:-608083 None:intergenic
CTCCGCGTCTATAGGCAAGA+CGG 0.671798 6_3:-608473 None:intergenic
TCGCAGAGCCAACAAGTGCG+CGG 0.675937 6_3:+608190 Msa0932450:CDS
ACAGCCTTCCTATAACATCA+GGG 0.679147 6_3:+606027 Msa0932450:CDS
AGCAACACGAGTAGTTTGAG+CGG 0.684691 6_3:+606593 Msa0932450:CDS
CCTCTGGCGGATTAGCGCAG+CGG 0.690338 6_3:-608548 None:intergenic
GATGGTAAGTCGTGTGAGAG+CGG 0.692630 6_3:+606485 Msa0932450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTATTCTAATAATTAAT+TGG - chr6_3:608906-608925 None:intergenic 10.0%
!!! TTTTTTTCCTTCTAATATAA+TGG + chr6_3:607452-607471 Msa0932450:intron 15.0%
!!! ATAATATGTTTTCATTAATG+TGG - chr6_3:607656-607675 None:intergenic 15.0%
!!! CCTTGATTATTTCTATATAA+GGG - chr6_3:606074-606093 None:intergenic 20.0%
!!! TCCTTGATTATTTCTATATA+AGG - chr6_3:606075-606094 None:intergenic 20.0%
!! AGACATTATCATCATAATTA+TGG + chr6_3:606128-606147 Msa0932450:CDS 20.0%
!! TCATTAAAATCACTGAAATT+CGG - chr6_3:606518-606537 None:intergenic 20.0%
!!! TTTTAGAATATTGAAGAGAT+TGG + chr6_3:606706-606725 Msa0932450:CDS 20.0%
!!! TTTAGAATATTGAAGAGATT+GGG + chr6_3:606707-606726 Msa0932450:CDS 20.0%
!! GTATATAATGTAGGTAAAAA+AGG - chr6_3:606884-606903 None:intergenic 20.0%
!! ATATACAACTCAAATTGAAT+AGG - chr6_3:607109-607128 None:intergenic 20.0%
!!! TAAGCTCTAAGAAATTATAT+CGG - chr6_3:607354-607373 None:intergenic 20.0%
!! GTAAAATCCATTATATTAGA+AGG - chr6_3:607462-607481 None:intergenic 20.0%
!! ACTTGTATAATAAACACTTA+TGG + chr6_3:607734-607753 Msa0932450:intron 20.0%
!!! ATTTCTCTAATTTTCGTTTT+CGG + chr6_3:607807-607826 Msa0932450:intron 20.0%
!! ATTCTAAATAATTACCAGAA+GGG - chr6_3:608632-608651 None:intergenic 20.0%
!! AATTCTAAATAATTACCAGA+AGG - chr6_3:608633-608652 None:intergenic 20.0%
!! AGTATGTTATATAGGAAAAT+GGG - chr6_3:608847-608866 None:intergenic 20.0%
!! AAGTATGTTATATAGGAAAA+TGG - chr6_3:608848-608867 None:intergenic 20.0%
!!! ATAGAGAAAGTATGTTATAT+AGG - chr6_3:608855-608874 None:intergenic 20.0%
!!! AATAGTATTTACTCTTTTGT+CGG + chr6_3:608918-608937 Msa0932450:intron 20.0%
!!! TGATTATTTCTATATAAGGG+AGG - chr6_3:606071-606090 None:intergenic 25.0%
! CCCTTATATAGAAATAATCA+AGG + chr6_3:606071-606090 Msa0932450:CDS 25.0%
! ATAAGGCAAATGATATAAGA+TGG + chr6_3:606633-606652 Msa0932450:CDS 25.0%
! TAAGGCAAATGATATAAGAT+GGG + chr6_3:606634-606653 Msa0932450:CDS 25.0%
! CAGATAGATATATAATTGCA+GGG - chr6_3:607051-607070 None:intergenic 25.0%
! ACAGATAGATATATAATTGC+AGG - chr6_3:607052-607071 None:intergenic 25.0%
! AACCAGTTTAATTAAGTACT+TGG + chr6_3:607173-607192 Msa0932450:intron 25.0%
! TTCCAAGTACTTAATTAAAC+TGG - chr6_3:607178-607197 None:intergenic 25.0%
! ATTAAGTACTTGGAATATAG+CGG + chr6_3:607183-607202 Msa0932450:intron 25.0%
!! TATAGCGGAAATAAATTACA+TGG + chr6_3:607198-607217 Msa0932450:intron 25.0%
! GATATAATTTCTTAGAGCTT+AGG + chr6_3:607353-607372 Msa0932450:intron 25.0%
! AAGTAAGATGTTTATCCTAT+AGG + chr6_3:607768-607787 Msa0932450:intron 25.0%
! AGTAAGATGTTTATCCTATA+GGG + chr6_3:607769-607788 Msa0932450:intron 25.0%
!! TTTCTCTAATTTTCGTTTTC+GGG + chr6_3:607808-607827 Msa0932450:intron 25.0%
!!! TTTTTTCTCTTTGGATTTTC+CGG - chr6_3:608118-608137 None:intergenic 25.0%
!!! TAGTCTGAATTTTTTCTCTT+TGG - chr6_3:608127-608146 None:intergenic 25.0%
!! ATCTTTTATTCAATAGAGGA+AGG - chr6_3:608708-608727 None:intergenic 25.0%
!! TGCAATCTTTTATTCAATAG+AGG - chr6_3:608712-608731 None:intergenic 25.0%
! ATTTGCCAAATTGTTGATAT+TGG + chr6_3:609070-609089 Msa0932450:intron 25.0%
!!! TATGTTTTTTATGTTGTTCC+AGG + chr6_3:609197-609216 Msa0932450:intron 25.0%
!!! TTCTTCTTCCAGATCTTTTT+TGG + chr6_3:606100-606119 Msa0932450:CDS 30.0%
TCTTTGTTCCAAAAAAGATC+TGG - chr6_3:606111-606130 None:intergenic 30.0%
TAACTACATAGCTGTTTAGA+TGG - chr6_3:606169-606188 None:intergenic 30.0%
ATCACGAAAGAAACAATGAA+AGG + chr6_3:606204-606223 Msa0932450:CDS 30.0%
AGAACTTGAGTCAAAAATCT+CGG - chr6_3:606273-606292 None:intergenic 30.0%
ATTCTTCGGTTGATTAACAA+CGG - chr6_3:606342-606361 None:intergenic 30.0%
GACTGAGAATAGTAATTCTT+CGG - chr6_3:606356-606375 None:intergenic 30.0%
!! TCAGTGATTTTAATGAGAGT+AGG + chr6_3:606522-606541 Msa0932450:CDS 30.0%
TGCTTTGTATAAACCTCATA+AGG + chr6_3:606616-606635 Msa0932450:CDS 30.0%
CTTATATCATTTGCCTTATG+AGG - chr6_3:606632-606651 None:intergenic 30.0%
TCAAAGTGGGTATATAATGT+AGG - chr6_3:606893-606912 None:intergenic 30.0%
GTTGTATATGTAGTTAAACC+TGG + chr6_3:607120-607139 Msa0932450:intron 30.0%
CTAAAGAAATTACATTGACC+AGG - chr6_3:607141-607160 None:intergenic 30.0%
!!! TTAAACTGGTTTTCCAAACA+GGG - chr6_3:607164-607183 None:intergenic 30.0%
!!! ATTAAACTGGTTTTCCAAAC+AGG - chr6_3:607165-607184 None:intergenic 30.0%
GTAATTTATTTAGCCCTGTT+TGG + chr6_3:607232-607251 Msa0932450:intron 30.0%
! AAGAAATTATATCGGCTACT+AGG - chr6_3:607346-607365 None:intergenic 30.0%
GCATCATGAATACTATAAAC+AGG + chr6_3:607408-607427 Msa0932450:intron 30.0%
TATCAAGAAAGCTATAAGAG+AGG - chr6_3:607628-607647 None:intergenic 30.0%
TCAATATACTTAGACCCTAT+AGG - chr6_3:607786-607805 None:intergenic 30.0%
TTCTTATACGAACTCTTGTT+TGG + chr6_3:608309-608328 Msa0932450:CDS 30.0%
ACAACGATGTTTAATGTTGT+TGG + chr6_3:608363-608382 Msa0932450:CDS 30.0%
CAACGATGTTTAATGTTGTT+GGG + chr6_3:608364-608383 Msa0932450:CDS 30.0%
! GAATGGATGTTGTTTGATTT+CGG - chr6_3:608502-608521 None:intergenic 30.0%
ATTCTTTCACAATGTGAACT+GGG + chr6_3:608518-608537 Msa0932450:CDS 30.0%
! ACTTCATTTTCAGTTGAGTT+TGG - chr6_3:608600-608619 None:intergenic 30.0%
AACTCAACTGAAAATGAAGT+TGG + chr6_3:608600-608619 Msa0932450:CDS 30.0%
TCTTACAACAGTTCATCAAT+TGG - chr6_3:608766-608785 None:intergenic 30.0%
AAACTTTGTTCCTCAAGTTA+AGG - chr6_3:608801-608820 None:intergenic 30.0%
ATATAGGAAAATGGGAATAG+AGG - chr6_3:608839-608858 None:intergenic 30.0%
GTATCACACTCAATAAACAT+TGG - chr6_3:608990-609009 None:intergenic 30.0%
TTATTGAGTGTGATACTCTT+AGG + chr6_3:608994-609013 Msa0932450:intron 30.0%
TATTGAGTGTGATACTCTTA+GGG + chr6_3:608995-609014 Msa0932450:intron 30.0%
TTGGCAAATAATCTGGTAAT+AGG - chr6_3:609059-609078 None:intergenic 30.0%
CAACAATTTGGCAAATAATC+TGG - chr6_3:609066-609085 None:intergenic 30.0%
CACAACCAATATCAACAATT+TGG - chr6_3:609078-609097 None:intergenic 30.0%
ATAGTTTCAACTGCAGTCAT+AGG - chr6_3:605966-605985 None:intergenic 35.0%
AAGAAACAATGAAAGGTTGC+CGG + chr6_3:606211-606230 Msa0932450:CDS 35.0%
ATATTGAAGAGATTGGGAAG+TGG + chr6_3:606713-606732 Msa0932450:CDS 35.0%
GTATATCTAGCTGAACTTAG+TGG + chr6_3:606749-606768 Msa0932450:CDS 35.0%
!!! ACAACCTGGGAAGTATTTTT+CGG + chr6_3:606982-607001 Msa0932450:CDS 35.0%
GTAATTTCTTTAGCCCTGTT+TGG + chr6_3:607148-607167 Msa0932450:intron 35.0%
CTAATCTGGTTATCCAAACA+GGG - chr6_3:607248-607267 None:intergenic 35.0%
ACTAATCTGGTTATCCAAAC+AGG - chr6_3:607249-607268 None:intergenic 35.0%
!! CTATAAGTGCTGAACTAATC+TGG - chr6_3:607262-607281 None:intergenic 35.0%
! GATTAGTTCAGCACTTATAG+TGG + chr6_3:607262-607281 Msa0932450:intron 35.0%
TATCTTACGAAAAGCTCAGT+TGG - chr6_3:607299-607318 None:intergenic 35.0%
AGTGAAAAGAAGCAAGAAAC+TGG - chr6_3:607384-607403 None:intergenic 35.0%
CTGTACTTAATCAACAGCTA+CGG + chr6_3:607578-607597 Msa0932450:intron 35.0%
!! CAGATTTTGATCTCTCTCTA+AGG + chr6_3:607956-607975 Msa0932450:CDS 35.0%
!! TTTGTTGACTTCACTAGAGT+TGG - chr6_3:607994-608013 None:intergenic 35.0%
!!! AGCTTTTAGTTTCAGTGATC+GGG - chr6_3:608017-608036 None:intergenic 35.0%
!!! GAGCTTTTAGTTTCAGTGAT+CGG - chr6_3:608018-608037 None:intergenic 35.0%
ATCACTGAAACTAAAAGCTC+CGG + chr6_3:608018-608037 Msa0932450:CDS 35.0%
! CCTTCACCTTTGATAATTTC+AGG - chr6_3:608252-608271 None:intergenic 35.0%
CCTGAAATTATCAAAGGTGA+AGG + chr6_3:608249-608268 Msa0932450:CDS 35.0%
ATTATCAAAGGTGAAGGACA+TGG + chr6_3:608255-608274 Msa0932450:CDS 35.0%
CAGTTCACATTGTGAAAGAA+TGG - chr6_3:608519-608538 None:intergenic 35.0%
CATTCTTTCACAATGTGAAC+TGG + chr6_3:608517-608536 Msa0932450:CDS 35.0%
! TGAGTTTGGTTTCATCATCA+TGG - chr6_3:608586-608605 None:intergenic 35.0%
AATGCTATGTGTAGAGTTTG+TGG + chr6_3:608673-608692 Msa0932450:intron 35.0%
TTCAATAGAGGAAGGAATCA+TGG - chr6_3:608700-608719 None:intergenic 35.0%
! ATTCCAAATGCCTTAACTTG+AGG + chr6_3:608788-608807 Msa0932450:intron 35.0%
! TCTATAGTCGCTCGAATTTT+GGG + chr6_3:608870-608889 Msa0932450:intron 35.0%
! AGTATTTACTCTTTTGTCGG+AGG + chr6_3:608921-608940 Msa0932450:intron 35.0%
! GTGTAATTTGTGACATCAAG+TGG + chr6_3:609095-609114 Msa0932450:intron 35.0%
TTATGTTGTTCCAGGTTTCT+TGG + chr6_3:609205-609224 Msa0932450:intron 35.0%
TGCAGTTGAAACTATTGCAG+AGG + chr6_3:605971-605990 Msa0932450:CDS 40.0%
GGTTCAGAATTCAGTTTCTG+AGG + chr6_3:605992-606011 Msa0932450:CDS 40.0%
ACAGCCTTCCTATAACATCA+GGG + chr6_3:606027-606046 Msa0932450:CDS 40.0%
GAATCCCTGATGTTATAGGA+AGG - chr6_3:606034-606053 None:intergenic 40.0%
!! TGCTTGCTGCATAATTTTGC+CGG - chr6_3:606233-606252 None:intergenic 40.0%
!! TAGTAACTGTTCTGAGGACT+AGG - chr6_3:606395-606414 None:intergenic 40.0%
GCTGAATAGTAACTGTTCTG+AGG - chr6_3:606401-606420 None:intergenic 40.0%
TTTCGCTTCTGAATAGACAG+TGG - chr6_3:606423-606442 None:intergenic 40.0%
AGGAAAACCAGTATCTGTAG+AGG + chr6_3:606542-606561 Msa0932450:CDS 40.0%
GGAAAACCAGTATCTGTAGA+GGG + chr6_3:606543-606562 Msa0932450:CDS 40.0%
TTCATCGCTAACATCACTTC+CGG - chr6_3:606573-606592 None:intergenic 40.0%
AGATTGGGAAGTGGAGATAT+AGG + chr6_3:606722-606741 Msa0932450:CDS 40.0%
AACTCGTAAGAAGCTACTGA+GGG + chr6_3:606820-606839 Msa0932450:CDS 40.0%
!!! TTGGTAATGGAGTTTTGTCC+TGG + chr6_3:606932-606951 Msa0932450:CDS 40.0%
GGGAGAAAGCTGAAAAAGAA+AGG - chr6_3:607031-607050 None:intergenic 40.0%
GGCTACTAGGTATAAATCTC+AGG - chr6_3:607333-607352 None:intergenic 40.0%
!!! TTTCGTTTTCGGGTTTTTGC+AGG + chr6_3:607818-607837 Msa0932450:intron 40.0%
!! CCAACACATTTTCAGGCTTA+AGG - chr6_3:607909-607928 None:intergenic 40.0%
CCTTAAGCCTGAAAATGTGT+TGG + chr6_3:607906-607925 Msa0932450:CDS 40.0%
! TCTCTCACCAACACATTTTC+AGG - chr6_3:607916-607935 None:intergenic 40.0%
! AATGTGTTGGTGAGAGAAGA+CGG + chr6_3:607919-607938 Msa0932450:CDS 40.0%
TTGGCGCCTGAAATTATCAA+AGG + chr6_3:608243-608262 Msa0932450:CDS 40.0%
CAGAACCTTTGAATGGTGTT+CGG - chr6_3:608335-608354 None:intergenic 40.0%
GAACACCATTCAAAGGTTCT+GGG + chr6_3:608334-608353 Msa0932450:CDS 40.0%
! GGAGATTCTGGAAACCTTAA+AGG - chr6_3:608393-608412 None:intergenic 40.0%
TTCATCATCATGGTCTGTCT+TGG - chr6_3:608576-608595 None:intergenic 40.0%
! GTTCCTCAAGTTAAGGCATT+TGG - chr6_3:608794-608813 None:intergenic 40.0%
! CTCTATAGTCGCTCGAATTT+TGG + chr6_3:608869-608888 Msa0932450:intron 40.0%
! CTATAGTCGCTCGAATTTTG+GGG + chr6_3:608871-608890 Msa0932450:intron 40.0%
! GAGGTCTAGAGCATTCATAA+TGG + chr6_3:608940-608959 Msa0932450:intron 40.0%
!! TAATGGACTAACTCTCTCCA+AGG + chr6_3:608957-608976 Msa0932450:intron 40.0%
!! AATGGACTAACTCTCTCCAA+GGG + chr6_3:608958-608977 Msa0932450:intron 40.0%
TAAACATTGGCATCAACCCT+TGG - chr6_3:608977-608996 None:intergenic 40.0%
TAGGGTTGTCAACATGATCT+AGG + chr6_3:609013-609032 Msa0932450:intron 40.0%
ATCTGGTAATAGGTACTCGA+CGG - chr6_3:609049-609068 None:intergenic 40.0%
TGACATCAAGTGGATACATG+TGG + chr6_3:609105-609124 Msa0932450:intron 40.0%
TTTCTTGGCTGACTGTCTTA+GGG + chr6_3:609220-609239 Msa0932450:CDS 40.0%
CTGATGTTATAGGAAGGCTG+TGG - chr6_3:606028-606047 None:intergenic 45.0%
CACAGCCTTCCTATAACATC+AGG + chr6_3:606026-606045 Msa0932450:CDS 45.0%
TTAACAACGGCTCGTTTCGA+TGG - chr6_3:606329-606348 None:intergenic 45.0%
!! ACACTCACTGACTTCAGTAC+TGG - chr6_3:606456-606475 None:intergenic 45.0%
!! AGTGAGTGTGTGAGTGTTGA+TGG + chr6_3:606467-606486 Msa0932450:CDS 45.0%
! AGTATCTGTAGAGGGAGTAC+CGG + chr6_3:606551-606570 Msa0932450:CDS 45.0%
AGCAACACGAGTAGTTTGAG+CGG + chr6_3:606593-606612 Msa0932450:CDS 45.0%
TAGCTGAACTTAGTGGCACA+AGG + chr6_3:606756-606775 Msa0932450:CDS 45.0%
CTTCTTACGAGTTGCAAGCT+CGG - chr6_3:606813-606832 None:intergenic 45.0%
CAACTCGTAAGAAGCTACTG+AGG + chr6_3:606819-606838 Msa0932450:CDS 45.0%
GAGTGTCTCAGTCTCAAAGT+GGG - chr6_3:606906-606925 None:intergenic 45.0%
! AGAGTGTCTCAGTCTCAAAG+TGG - chr6_3:606907-606926 None:intergenic 45.0%
GACACTCTCTTGCTTGGTAA+TGG + chr6_3:606919-606938 Msa0932450:CDS 45.0%
!! GTAATGGAGTTTTGTCCTGG+TGG + chr6_3:606935-606954 Msa0932450:CDS 45.0%
GTCTTTGCCTGATTGCATGA+AGG - chr6_3:606964-606983 None:intergenic 45.0%
CAATCAGGCAAAGACAACCT+GGG + chr6_3:606969-606988 Msa0932450:CDS 45.0%
TGCTCCGAAAAATACTTCCC+AGG - chr6_3:606989-607008 None:intergenic 45.0%
!! ATTTTTCGGAGCATGCTGTC+AGG + chr6_3:606996-607015 Msa0932450:CDS 45.0%
TGCAGAAGTTCTGCTTGCTT+TGG + chr6_3:607849-607868 Msa0932450:CDS 45.0%
! TTGGAGTACTTGCACATGCT+TGG + chr6_3:607868-607887 Msa0932450:CDS 45.0%
CTTCACTAGAGTTGGACTGA+CGG - chr6_3:607986-608005 None:intergenic 45.0%
! AACATGCATGCTTTTCGCCA+CGG + chr6_3:608085-608104 Msa0932450:CDS 45.0%
! TTTTCGCCACGGTTTCTATC+CGG + chr6_3:608096-608115 Msa0932450:CDS 45.0%
! GATTTTCCGGATAGAAACCG+TGG - chr6_3:608105-608124 None:intergenic 45.0%
TTTGGCCGAACACCATTCAA+AGG + chr6_3:608327-608346 Msa0932450:CDS 45.0%
CGAACACCATTCAAAGGTTC+TGG + chr6_3:608333-608352 Msa0932450:CDS 45.0%
CGATTCCCAGAACCTTTGAA+TGG - chr6_3:608342-608361 None:intergenic 45.0%
ATGTTGTTGGGCAGCCTTTA+AGG + chr6_3:608376-608395 Msa0932450:CDS 45.0%
AAGCTGACAGTAGGAGATTC+TGG - chr6_3:608405-608424 None:intergenic 45.0%
TACTGTCAGCTTTGCTGCAA+GGG + chr6_3:608413-608432 Msa0932450:CDS 45.0%
TCTATAGGCAAGACGGTGTT+GGG - chr6_3:608469-608488 None:intergenic 45.0%
GAAGTTGGAATGAACCCTTC+TGG + chr6_3:608615-608634 Msa0932450:CDS 45.0%
GGTTGTCAACATGATCTAGG+TGG + chr6_3:609016-609035 Msa0932450:intron 45.0%
TCTGGTAATAGGTACTCGAC+GGG - chr6_3:609048-609067 None:intergenic 45.0%
GTTTCTTGGCTGACTGTCTT+AGG + chr6_3:609219-609238 Msa0932450:CDS 45.0%
TTCTTGGCTGACTGTCTTAG+GGG + chr6_3:609221-609240 Msa0932450:CDS 45.0%
!!! CTGTCTTAGGGGCGATTTTT+TGG + chr6_3:609232-609251 Msa0932450:CDS 45.0%
ATAGGAAGGCTGTGGCGTAT+CGG - chr6_3:606020-606039 None:intergenic 50.0%
CGGGGAATCCCTGATGTTAT+AGG - chr6_3:606038-606057 None:intergenic 50.0%
GATGGTAAGTCGTGTGAGAG+CGG + chr6_3:606485-606504 Msa0932450:CDS 50.0%
GGTACTCCCTCTACAGATAC+TGG - chr6_3:606552-606571 None:intergenic 50.0%
GACTGAGACACTCTCTTGCT+TGG + chr6_3:606913-606932 Msa0932450:CDS 50.0%
GCAATCAGGCAAAGACAACC+TGG + chr6_3:606968-606987 Msa0932450:CDS 50.0%
! TGCTGGCTGAATGCAGTATC+CGG - chr6_3:608040-608059 None:intergenic 50.0%
CATGCATGTTGGATGCAGTC+TGG - chr6_3:608075-608094 None:intergenic 50.0%
! GTGGCGAAAAGCATGCATGT+TGG - chr6_3:608086-608105 None:intergenic 50.0%
GTACTCGTGTGTGCCTACAA+AGG - chr6_3:608223-608242 None:intergenic 50.0%
TGTAGGCACACACGAGTACT+TGG + chr6_3:608224-608243 Msa0932450:CDS 50.0%
!! TGAAGGACATGGAAGTGCTG+TGG + chr6_3:608266-608285 Msa0932450:CDS 50.0%
!! GACATGGAAGTGCTGTGGAT+TGG + chr6_3:608271-608290 Msa0932450:CDS 50.0%
!! ATGGAAGTGCTGTGGATTGG+TGG + chr6_3:608274-608293 Msa0932450:CDS 50.0%
CTTGCAGCAAAGCTGACAGT+AGG - chr6_3:608414-608433 None:intergenic 50.0%
CTACTGTCAGCTTTGCTGCA+AGG + chr6_3:608412-608431 Msa0932450:CDS 50.0%
! CTATAGGCAAGACGGTGTTG+GGG - chr6_3:608468-608487 None:intergenic 50.0%
GTCTATAGGCAAGACGGTGT+TGG - chr6_3:608470-608489 None:intergenic 50.0%
ATGGTCTGTCTTGGTACCTC+TGG - chr6_3:608567-608586 None:intergenic 50.0%
TGGTAATAGGTACTCGACGG+GGG - chr6_3:609046-609065 None:intergenic 50.0%
CTGGTAATAGGTACTCGACG+GGG - chr6_3:609047-609066 None:intergenic 50.0%
AGACAGTCAGCCAAGAAACC+TGG - chr6_3:609218-609237 None:intergenic 50.0%
ATAAGGGAGGCCGCGAAGAA+CGG - chr6_3:606058-606077 None:intergenic 55.0%
TCGCGAGGGGATGTTGGAAA+TGG + chr6_3:606679-606698 Msa0932450:CDS 55.0%
CGCGAGGGGATGTTGGAAAT+GGG + chr6_3:606680-606699 Msa0932450:CDS 55.0%
GCGAGGGGATGTTGGAAATG+GGG + chr6_3:606681-606700 Msa0932450:CDS 55.0%
GAAGCTACTGAGGGCTCAGA+CGG + chr6_3:606829-606848 Msa0932450:CDS 55.0%
ATTGCATGAAGGTCGCCACC+AGG - chr6_3:606953-606972 None:intergenic 55.0%
GTGGCGACCTTCATGCAATC+AGG + chr6_3:606954-606973 Msa0932450:CDS 55.0%
TCTGGCTGCATTGCACATGC+TGG - chr6_3:608057-608076 None:intergenic 55.0%
!! GCTCAGGGAGAGGTGTCATT+TGG - chr6_3:608167-608186 None:intergenic 55.0%
!! TTGGCTCTGCGACTAGCTCA+GGG - chr6_3:608182-608201 None:intergenic 55.0%
GACATTGACCGCGCACTTGT+TGG - chr6_3:608201-608220 None:intergenic 55.0%
GCGCGGTCAATGTCCTTTGT+AGG + chr6_3:608207-608226 Msa0932450:CDS 55.0%
!! GCTGTGGATTGGTGGACGTT+CGG + chr6_3:608282-608301 Msa0932450:CDS 55.0%
!! CTGTGGATTGGTGGACGTTC+GGG + chr6_3:608283-608302 Msa0932450:CDS 55.0%
GCTGCAAGGGACTTGATCAG+AGG + chr6_3:608426-608445 Msa0932450:CDS 55.0%
CACCGTCTTGCCTATAGACG+CGG + chr6_3:608471-608490 Msa0932450:CDS 55.0%
CTCCGCGTCTATAGGCAAGA+CGG - chr6_3:608476-608495 None:intergenic 55.0%
TTCGGTAGCTCCGCGTCTAT+AGG - chr6_3:608484-608503 None:intergenic 55.0%
GTCTGTCTTGGTACCTCTGG+CGG - chr6_3:608564-608583 None:intergenic 55.0%
CAGGGATTCCCCGTTCTTCG+CGG + chr6_3:606045-606064 Msa0932450:CDS 60.0%
TAAGGGAGGCCGCGAAGAAC+GGG - chr6_3:606057-606076 None:intergenic 60.0%
! TCTGCGACTAGCTCAGGGAG+AGG - chr6_3:608177-608196 None:intergenic 60.0%
!! GTTGGCTCTGCGACTAGCTC+AGG - chr6_3:608183-608202 None:intergenic 60.0%
TCGCAGAGCCAACAAGTGCG+CGG + chr6_3:608190-608209 Msa0932450:CDS 60.0%
AAGGGAGGCCGCGAAGAACG+GGG - chr6_3:606056-606075 None:intergenic 65.0%
TCAAGCTGTCCGAGCTCGCG+AGG + chr6_3:606664-606683 Msa0932450:CDS 65.0%
CAAGCTGTCCGAGCTCGCGA+GGG + chr6_3:606665-606684 Msa0932450:CDS 65.0%
AAGCTGTCCGAGCTCGCGAG+GGG + chr6_3:606666-606685 Msa0932450:CDS 65.0%
CCAACATCCCCTCGCGAGCT+CGG - chr6_3:606676-606695 None:intergenic 65.0%
!! CCTCTGGCGGATTAGCGCAG+CGG - chr6_3:608551-608570 None:intergenic 65.0%
CCGAGCTCGCGAGGGGATGT+TGG + chr6_3:606673-606692 Msa0932450:CDS 70.0%
CCGCTGCGCTAATCCGCCAG+AGG + chr6_3:608548-608567 Msa0932450:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 605954 609280 605954 ID=Msa0932450;Name=Msa0932450
chr6_3 mRNA 605954 609280 605954 ID=Msa0932450-mRNA-1;Parent=Msa0932450;Name=Msa0932450-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.66|1|1|3|0|640
chr6_3 exon 605954 607017 605954 ID=Msa0932450-mRNA-1:exon:228;Parent=Msa0932450-mRNA-1
chr6_3 exon 607840 608636 607840 ID=Msa0932450-mRNA-1:exon:229;Parent=Msa0932450-mRNA-1
chr6_3 exon 609219 609280 609219 ID=Msa0932450-mRNA-1:exon:230;Parent=Msa0932450-mRNA-1
chr6_3 CDS 605954 607017 605954 ID=Msa0932450-mRNA-1:cds;Parent=Msa0932450-mRNA-1
chr6_3 CDS 607840 608636 607840 ID=Msa0932450-mRNA-1:cds;Parent=Msa0932450-mRNA-1
chr6_3 CDS 609219 609280 609219 ID=Msa0932450-mRNA-1:cds;Parent=Msa0932450-mRNA-1
Gene Sequence

>Msa0932450

ATGGAGTCTCCTATGACTGCAGTTGAAACTATTGCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCTTCCAGATCTTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGTTGCCGGCAAAATTATGCAGCAAGCAAATGTTTGATGATGATTCCGAGATTTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATAGTATCTTAGTTCCATCGAAACGAGCCGTTGTTAATCAACCGAAGAATTACTATTCTCAGTCAGAGACTAGTTTTTGTCCTAGTCCTCAGAACAGTTACTATTCAGCCACTGTCTATTCAGAAGCGAAACAAAGTTTCACCAGTACTGAAGTCAGTGAGTGTGTGAGTGTTGATGGTAAGTCGTGTGAGAGCGGAGAAGTTCCGAATTTCAGTGATTTTAATGAGAGTAGGAAAACCAGTATCTGTAGAGGGAGTACCGGAAGTGATGTTAGCGATGAAAGCAACACGAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGCGAGGGGATGTTGGAAATGGGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCGAGCTTGCAACTCGTAAGAAGCTACTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACCCACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCTGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCGGAGCATGCTGTCAGGTTTTATGTTGCAGAAGTTCTGCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAGCCTGAAAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAGTGAAGTCAACAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCATGTGCAATGCAGCCAGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTCGCAGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATCAAAGGTGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGCCGAACACCATTCAAAGGTTCTGGGAATCGAACAACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGCTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCATTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCTAATCCGCCAGAGGTACCAAGACAGACCATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGTTTCTTGGCTGACTGTCTTAGGGGCGATTTTTTGGATGTTGTTTTTCCTAAGTTGTCTTAG
Protein sequence

>Msa0932450

MESPMTAVETIAEVQNSVSEVPIRHSLPITSGIPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERLPAKLCSKQMFDDDSEIFDSSSEVLESDNSILVPSKRAVVNQPKNYYSQSETSFCPSPQNSYYSATVYSEAKQSFTSTEVSECVSVDGKSCESGEVPNFSDFNESRKTSICRGSTGSDVSDESNTSSLSGALYKPHKANDIRWEAIQAVRAREGMLEMGHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSTNPITETKSSGYCIQPACAMQPDCIQHACFSPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMKPNSTENEVGMNPSGFLADCLRGDFLDVVFPKLS*