AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1379470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1379470 MtrunA17_Chr6g0449401 90.744 659 22 3 1 620 13 671 0.0 1197
Msa1379470 MtrunA17_Chr7g0227331 68.259 649 160 15 1 635 1 617 0.0 820
Msa1379470 MtrunA17_Chr2g0290691 72.429 457 117 3 158 606 113 568 0.0 698
Msa1379470 MtrunA17_Chr7g0250631 63.561 483 162 6 147 617 255 735 0.0 617
Msa1379470 MtrunA17_Chr8g0335351 66.450 462 143 6 147 598 261 720 0.0 609
Msa1379470 MtrunA17_Chr1g0179101 64.165 413 140 4 191 599 413 821 0.0 545
Msa1379470 MtrunA17_Chr7g0266031 59.436 461 174 6 147 599 388 843 0.0 545
Msa1379470 MtrunA17_Chr3g0080101 58.352 449 161 8 162 600 337 769 4.94e-178 525
Msa1379470 MtrunA17_Chr8g0356291 61.962 418 149 6 188 599 65 478 7.86e-178 515
Msa1379470 MtrunA17_Chr2g0309421 62.189 402 141 5 203 599 131 526 5.30e-177 514
Msa1379470 MtrunA17_Chr4g0063311 53.623 414 165 7 220 614 62 467 1.94e-146 433
Msa1379470 MtrunA17_Chr2g0321101 52.987 385 145 7 228 592 66 434 2.75e-128 386
Msa1379470 MtrunA17_Chr8g0381091 48.974 390 167 6 224 599 52 423 9.13e-121 366
Msa1379470 MtrunA17_Chr2g0285711 47.585 414 184 6 199 599 32 425 2.03e-120 365
Msa1379470 MtrunA17_Chr2g0312641 43.269 416 193 11 197 598 33 419 4.00e-111 342
Msa1379470 MtrunA17_Chr4g0030361 46.933 375 152 4 224 598 282 609 7.99e-110 344
Msa1379470 MtrunA17_Chr8g0369091 45.153 392 169 3 224 613 572 919 2.81e-108 348
Msa1379470 MtrunA17_Chr2g0327561 47.467 375 161 2 224 598 601 939 4.59e-106 343
Msa1379470 MtrunA17_Chr8g0338741 39.474 380 171 12 246 599 15 361 6.77e-78 254
Msa1379470 MtrunA17_Chr2g0329011 38.719 359 178 7 246 599 12 333 3.72e-74 243
Msa1379470 MtrunA17_Chr4g0032761 37.302 378 195 8 246 599 10 369 1.08e-71 238
Msa1379470 MtrunA17_Chr7g0234641 34.656 378 220 7 246 614 8 367 9.38e-68 227
Msa1379470 MtrunA17_Chr4g0018201 35.278 360 180 8 251 609 759 1066 5.42e-58 211
Msa1379470 MtrunA17_Chr5g0428981 35.000 360 181 8 251 609 763 1070 7.01e-58 211
Msa1379470 MtrunA17_Chr6g0478601 34.278 353 188 8 248 599 108 417 8.89e-57 200
Msa1379470 MtrunA17_Chr3g0135951 31.387 411 233 13 184 587 38 406 7.55e-50 181
Msa1379470 MtrunA17_Chr1g0153321 30.726 358 205 8 239 590 96 416 4.42e-48 176
Msa1379470 MtrunA17_Chr2g0299781 29.834 362 222 8 230 587 92 425 9.85e-47 172
Msa1379470 MtrunA17_Chr1g0187581 31.755 359 194 10 251 598 117 435 1.79e-46 172
Msa1379470 MtrunA17_Chr1g0167351 31.148 366 208 10 242 598 99 429 2.05e-45 169
Msa1379470 MtrunA17_Chr1g0167311 30.729 384 223 12 224 600 85 432 4.45e-45 168
Msa1379470 MtrunA17_Chr1g0183651 30.518 367 211 9 239 598 108 437 6.51e-45 168
Msa1379470 MtrunA17_Chr7g0261491 29.469 414 234 13 196 598 75 441 6.51e-43 163
Msa1379470 MtrunA17_Chr7g0245031 39.865 148 87 1 251 398 148 293 5.74e-27 114
Msa1379470 MtrunA17_Chr7g0245031 43.363 113 61 2 476 587 299 409 1.07e-20 95.9
Msa1379470 MtrunA17_Chr4g0059751 37.580 157 85 3 251 398 89 241 4.66e-26 111
Msa1379470 MtrunA17_Chr4g0059751 37.288 118 71 2 476 592 247 362 6.66e-21 95.9
Msa1379470 MtrunA17_Chr1g0197721 36.076 158 99 1 238 395 38 193 8.54e-24 105
Msa1379470 MtrunA17_Chr1g0197721 33.577 137 85 3 463 598 203 334 1.33e-11 67.4
Msa1379470 MtrunA17_Chr8g0351491 26.239 343 173 8 240 582 5 267 2.72e-21 94.4
Msa1379470 MtrunA17_Chr3g0140631 35.526 152 96 1 248 399 34 183 4.31e-21 94.4
Msa1379470 MtrunA17_Chr3g0140631 35.185 108 66 1 475 582 185 288 2.69e-15 77.0
Msa1379470 MtrunA17_Chr2g0286501 25.970 335 170 8 248 582 46 302 7.20e-21 97.8
Msa1379470 MtrunA17_Chr3g0125381 40.541 111 62 1 472 582 100 206 1.44e-20 90.9
Msa1379470 MtrunA17_Chr3g0125381 29.775 178 109 6 301 467 2 174 4.74e-11 63.2
Msa1379470 MtrunA17_Chr3g0132591 26.748 329 152 8 257 582 118 360 1.63e-19 92.0
Msa1379470 MtrunA17_Chr4g0013131 23.000 400 207 15 242 636 3 306 4.83e-18 87.4
Msa1379470 MtrunA17_Chr3g0114511 32.484 157 99 2 243 398 24 174 8.74e-18 86.7
Msa1379470 MtrunA17_Chr7g0244521 25.073 343 174 11 243 582 4 266 9.28e-18 86.7
Msa1379470 MtrunA17_Chr8g0353621 31.285 179 116 2 251 424 10 186 1.49e-17 83.2
Msa1379470 MtrunA17_Chr8g0353621 40.196 102 57 1 481 582 164 261 7.49e-16 78.2
Msa1379470 MtrunA17_Chr3g0107051 35.099 151 95 2 248 398 18 165 1.61e-17 85.5
Msa1379470 MtrunA17_Chr8g0379091 32.680 153 100 1 246 398 21 170 2.53e-17 85.5
Msa1379470 MtrunA17_Chr6g0453681 24.850 334 172 9 250 583 18 272 2.79e-17 85.1
Msa1379470 MtrunA17_Chr1g0188031 32.704 159 91 4 248 398 17 167 3.62e-17 84.3
Msa1379470 MtrunA17_Chr6g0468751 24.925 333 171 9 250 582 18 271 3.97e-17 84.7
Msa1379470 MtrunA17_Chr1g0205421 32.911 158 99 3 242 397 3 155 4.03e-17 84.3
Msa1379470 MtrunA17_Chr3g0132671 24.793 363 164 11 250 582 18 301 4.32e-17 84.7
Msa1379470 MtrunA17_Chr2g0284031 32.026 153 101 1 246 398 26 175 4.63e-17 84.7
Msa1379470 MtrunA17_Chr2g0302431 30.864 162 110 2 237 398 6 165 9.49e-17 83.6
Msa1379470 MtrunA17_Chr5g0432491 34.437 151 97 2 248 398 20 168 1.43e-16 82.8
Msa1379470 MtrunA17_Chr3g0107011 24.047 341 174 11 248 584 11 270 1.52e-16 82.8
Msa1379470 MtrunA17_Chr8g0346071 23.631 347 180 12 237 582 8 270 2.12e-16 82.0
Msa1379470 MtrunA17_Chr2g0321841 29.221 154 103 3 248 398 1 151 3.22e-16 82.8
Msa1379470 MtrunA17_Chr2g0284011 24.918 305 150 9 243 543 4 233 3.76e-16 81.3
Msa1379470 MtrunA17_Chr4g0074111 24.188 277 135 7 249 523 16 219 4.51e-16 80.9
Msa1379470 MtrunA17_Chr4g0025671 28.387 155 105 3 247 398 4 155 5.62e-16 82.0
Msa1379470 MtrunA17_Chr1g0190831 28.387 155 103 3 248 398 1 151 9.90e-16 80.9
Msa1379470 MtrunA17_Chr2g0330211 23.416 363 205 11 246 594 13 316 1.21e-15 80.1
Msa1379470 MtrunA17_Chr5g0428031 29.605 152 105 2 247 398 5 154 1.36e-15 79.7
Msa1379470 MtrunA17_Chr4g0063881 29.091 165 115 1 247 411 7 169 1.89e-15 79.3
Msa1379470 MtrunA17_Chr8g0345801 23.529 323 164 11 248 563 12 258 2.14e-15 76.6
Msa1379470 MtrunA17_Chr1g0173921 28.571 154 104 3 248 398 1 151 4.53e-15 79.3
Msa1379470 MtrunA17_Chr5g0432471 22.324 327 169 10 248 568 9 256 6.15e-15 77.8
Msa1379470 MtrunA17_Chr7g0272841 30.688 189 114 6 251 431 68 247 1.47e-14 77.0
Msa1379470 MtrunA17_Chr7g0258051 26.115 157 110 3 247 400 12 165 1.84e-14 76.6
Msa1379470 MtrunA17_Chr2g0304111 29.560 159 105 3 240 398 17 168 2.50e-14 75.9
Msa1379470 MtrunA17_Chr6g0486661 35.433 127 72 5 478 598 912 1034 3.19e-14 76.6
Msa1379470 MtrunA17_Chr8g0385341 33.333 153 96 4 251 399 30 180 3.19e-14 75.5
Msa1379470 MtrunA17_Chr7g0274941 30.323 155 103 3 243 395 8 159 5.37e-14 73.2
Msa1379470 MtrunA17_Chr7g0274941 35.922 103 59 3 483 582 176 274 7.85e-11 63.5
Msa1379470 MtrunA17_Chr3g0091311 30.128 156 106 2 243 398 4 156 6.98e-14 72.0
Msa1379470 MtrunA17_Chr1g0185221 27.273 154 106 3 248 398 1 151 7.49e-14 74.7
Msa1379470 MtrunA17_Chr5g0441011 30.864 162 101 5 239 398 6 158 8.65e-14 73.9
Msa1379470 MtrunA17_Chr7g0260191 26.623 154 107 3 248 398 1 151 1.15e-13 74.3
Msa1379470 MtrunA17_Chr5g0419441 28.947 152 105 2 251 402 239 387 1.21e-13 74.3
Msa1379470 MtrunA17_Chr1g0200601 31.818 154 99 4 250 399 29 180 1.43e-13 73.6
Msa1379470 MtrunA17_Chr5g0409421 26.176 340 193 12 248 584 1 285 1.53e-13 73.2
Msa1379470 MtrunA17_Chr1g0170551 33.019 106 65 2 481 586 162 261 1.70e-13 74.3
Msa1379470 MtrunA17_Chr1g0170551 29.375 160 109 3 251 410 7 162 5.42e-12 69.3
Msa1379470 MtrunA17_Chr1g0166101 30.380 158 95 3 248 398 21 170 1.70e-13 72.8
Msa1379470 MtrunA17_Chr1g0205931 29.545 220 130 8 239 448 53 257 1.87e-13 73.6
Msa1379470 MtrunA17_Chr1g0202831 28.402 169 111 3 239 402 399 562 1.99e-13 73.9
Msa1379470 MtrunA17_Chr4g0001331 30.921 152 97 3 247 398 21 164 2.10e-13 72.8
Msa1379470 MtrunA17_Chr1g0150321 31.126 151 101 2 248 398 10 157 2.57e-13 72.4
Msa1379470 MtrunA17_Chr7g0256001 30.435 184 113 6 250 426 140 315 2.62e-13 73.2
Msa1379470 MtrunA17_Chr2g0317001 27.632 152 106 2 251 402 15 162 2.95e-13 73.2
Msa1379470 MtrunA17_Chr8g0346081 28.302 159 107 3 240 398 11 162 4.89e-13 71.6
Msa1379470 MtrunA17_Chr8g0339221 27.089 395 217 17 248 633 1 333 5.04e-13 71.6
Msa1379470 MtrunA17_Chr1g0176421 30.337 178 115 5 251 426 161 331 7.83e-13 71.6
Msa1379470 MtrunA17_Chr3g0130151 30.675 163 107 5 249 408 242 401 8.77e-13 71.6
Msa1379470 MtrunA17_Chr1g0170281 31.677 161 100 5 247 399 110 268 1.47e-12 70.5
Msa1379470 MtrunA17_Chr3g0091281 25.442 283 133 9 243 522 4 211 1.66e-12 67.8
Msa1379470 MtrunA17_Chr5g0448721 28.415 183 122 5 251 431 96 271 1.97e-12 70.1
Msa1379470 MtrunA17_Chr1g0203881 32.432 148 94 3 255 398 45 190 2.87e-12 69.3
Msa1379470 MtrunA17_Chr8g0374701 29.697 165 102 5 266 426 148 302 3.32e-12 69.3
Msa1379470 MtrunA17_Chr4g0008561 27.273 176 111 6 414 583 113 277 4.74e-12 69.3
Msa1379470 MtrunA17_Chr2g0317501 31.579 171 108 6 233 398 114 280 5.52e-12 68.9
Msa1379470 MtrunA17_Chr8g0384301 26.882 186 123 5 248 430 296 471 6.44e-12 68.9
Msa1379470 MtrunA17_Chr3g0133541 31.579 152 101 2 249 398 305 455 6.72e-12 68.6
Msa1379470 MtrunA17_Chr5g0441691 29.444 180 114 5 251 426 68 238 8.30e-12 68.2
Msa1379470 MtrunA17_Chr1g0173541 32.051 156 100 4 248 399 49 202 1.04e-11 67.8
Msa1379470 MtrunA17_Chr4g0047191 30.693 101 70 0 298 398 94 194 1.93e-11 66.2
Msa1379470 MtrunA17_Chr4g0047211 30.693 101 70 0 298 398 89 189 2.29e-11 65.9
Msa1379470 MtrunA17_Chr0c02g0489761 29.444 180 114 5 251 426 78 248 2.65e-11 66.6
Msa1379470 MtrunA17_Chr1g0201571 32.026 153 93 6 251 398 126 272 2.71e-11 66.6
Msa1379470 MtrunA17_Chr4g0074811 32.680 153 97 5 251 399 91 241 2.87e-11 66.2
Msa1379470 MtrunA17_Chr4g0045261 29.412 153 96 4 278 426 167 311 2.95e-11 66.6
Msa1379470 MtrunA17_Chr3g0129721 32.051 156 93 6 250 398 23 172 3.05e-11 64.7
Msa1379470 MtrunA17_Chr2g0333821 29.730 148 101 2 251 398 14 158 3.15e-11 65.9
Msa1379470 MtrunA17_Chr5g0444171 30.065 153 101 4 251 399 92 242 3.30e-11 66.2
Msa1379470 MtrunA17_Chr3g0091421 30.573 157 102 4 244 398 5 156 3.78e-11 63.9
Msa1379470 MtrunA17_Chr7g0257751 31.373 153 99 4 251 399 58 208 4.39e-11 65.9
Msa1379470 MtrunA17_Chr7g0252301 29.814 161 106 3 249 406 853 1009 5.13e-11 66.2
Msa1379470 MtrunA17_Chr1g0188991 27.273 187 123 4 251 436 15 189 6.88e-11 65.5
Msa1379470 MtrunA17_Chr5g0402551 27.660 188 121 6 251 431 134 313 7.48e-11 65.1
Msa1379470 MtrunA17_Chr3g0131181 30.719 153 100 4 251 399 29 179 8.47e-11 64.7
Msa1379470 MtrunA17_Chr5g0405421 26.519 181 120 5 251 426 99 271 9.35e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1379470 AT5G47750.1 70.231 477 119 6 158 616 98 569 0.0 678
Msa1379470 AT4G26610.1 72.429 457 119 5 147 600 22 474 0.0 667
Msa1379470 AT5G55910.2 70.450 467 127 5 150 610 13 474 0.0 652
Msa1379470 AT5G55910.1 70.450 467 127 5 150 610 13 474 0.0 652
Msa1379470 AT3G27580.2 70.105 475 119 6 139 605 80 539 0.0 650
Msa1379470 AT3G27580.1 70.105 475 119 6 139 605 80 539 0.0 650
Msa1379470 AT2G44830.2 65.237 443 142 8 191 627 303 739 0.0 584
Msa1379470 AT2G44830.3 65.237 443 142 8 191 627 303 739 0.0 584
Msa1379470 AT2G44830.1 65.237 443 142 8 191 627 303 739 0.0 584
Msa1379470 AT5G40030.1 66.927 384 112 6 224 600 86 461 0.0 541
Msa1379470 AT1G79250.1 66.142 381 122 3 224 599 119 497 0.0 525
Msa1379470 AT1G79250.3 66.142 381 122 3 224 599 119 497 0.0 525
Msa1379470 AT1G79250.2 66.142 381 122 3 224 599 119 497 0.0 525
Msa1379470 AT1G79250.4 66.142 381 122 3 224 599 119 497 0.0 525
Msa1379470 AT3G52890.2 61.190 420 150 4 191 599 479 896 1.32e-178 531
Msa1379470 AT3G52890.4 61.190 420 150 4 191 599 479 896 1.32e-178 531
Msa1379470 AT3G52890.1 61.190 420 150 4 191 599 479 896 1.32e-178 531
Msa1379470 AT3G52890.3 61.190 420 150 4 191 599 479 896 1.32e-178 531
Msa1379470 AT3G12690.1 62.341 393 141 3 207 599 141 526 5.91e-177 515
Msa1379470 AT3G12690.3 62.341 393 141 3 207 599 141 526 5.91e-177 515
Msa1379470 AT3G12690.2 62.341 393 141 3 207 599 141 526 5.91e-177 515
Msa1379470 AT5G03640.2 58.837 430 158 6 182 599 473 895 3.52e-175 522
Msa1379470 AT5G03640.1 58.837 430 158 6 182 599 473 895 3.52e-175 522
Msa1379470 AT1G16440.1 65.079 378 120 4 224 599 86 453 1.22e-174 506
Msa1379470 AT2G36350.1 60.621 419 152 5 191 599 500 915 7.32e-171 512
Msa1379470 AT2G26700.1 46.767 464 190 8 193 601 23 484 3.09e-133 401
Msa1379470 AT3G44610.1 54.795 365 130 8 251 592 71 423 5.25e-128 385
Msa1379470 AT2G34650.1 48.284 408 179 9 224 621 50 435 6.43e-124 374
Msa1379470 AT5G58140.6 45.758 389 165 4 225 611 551 895 2.17e-109 351
Msa1379470 AT5G58140.7 45.758 389 165 4 225 611 551 895 2.17e-109 351
Msa1379470 AT5G58140.5 45.758 389 165 4 225 611 551 895 2.17e-109 351
Msa1379470 AT5G58140.2 45.758 389 165 4 225 611 551 895 2.17e-109 351
Msa1379470 AT5G58140.1 45.758 389 165 4 225 611 551 895 2.17e-109 351
Msa1379470 AT5G58140.3 47.139 367 150 3 225 591 551 873 3.69e-107 344
Msa1379470 AT3G14370.1 43.590 390 181 6 226 606 61 420 1.10e-105 328
Msa1379470 AT3G45780.2 46.400 375 159 4 224 598 636 968 6.60e-99 325
Msa1379470 AT3G45780.1 46.400 375 159 4 224 598 636 968 6.60e-99 325
Msa1379470 AT1G53700.1 40.695 403 197 6 226 618 66 436 1.34e-97 307
Msa1379470 AT3G20830.1 39.071 366 191 9 245 599 15 359 4.39e-71 236
Msa1379470 AT1G51170.1 38.356 365 191 10 246 599 17 358 7.62e-71 235
Msa1379470 AT3G25250.1 34.986 363 200 8 246 599 12 347 3.31e-66 223
Msa1379470 AT4G13000.1 34.435 363 192 9 246 599 15 340 1.17e-65 220
Msa1379470 AT5G62310.1 34.160 363 181 10 251 609 754 1062 2.19e-53 198
Msa1379470 AT1G45160.2 35.393 356 179 8 246 597 665 973 7.55e-53 196
Msa1379470 AT1G45160.1 35.393 356 179 8 246 597 665 973 9.89e-53 196
Msa1379470 AT1G48490.4 33.819 343 177 7 246 587 824 1117 4.65e-52 194
Msa1379470 AT1G48490.3 33.819 343 177 7 246 587 823 1116 5.00e-52 194
Msa1379470 AT1G48490.2 33.819 343 177 7 246 587 823 1116 5.00e-52 194
Msa1379470 AT1G48490.1 33.819 343 177 7 246 587 823 1116 5.00e-52 194
Msa1379470 AT3G17850.1 34.311 341 180 8 248 587 879 1176 1.45e-51 193
Msa1379470 AT1G30640.3 30.081 369 222 10 236 600 12 348 3.97e-49 178
Msa1379470 AT5G09890.2 31.161 353 206 8 239 587 90 409 5.75e-49 179
Msa1379470 AT1G30640.2 30.081 369 222 8 236 600 105 441 6.71e-49 180
Msa1379470 AT1G30640.1 30.081 369 222 8 236 600 105 441 6.71e-49 180
Msa1379470 AT5G09890.1 31.161 353 206 8 239 587 90 409 6.83e-49 179
Msa1379470 AT4G33080.2 30.688 378 224 10 230 598 73 421 3.00e-48 177
Msa1379470 AT4G33080.1 30.159 378 226 9 230 598 73 421 3.27e-48 177
Msa1379470 AT2G20470.3 30.790 367 208 9 239 599 112 438 4.19e-45 169
Msa1379470 AT2G20470.2 30.790 367 208 9 239 599 112 438 5.98e-45 169
Msa1379470 AT2G20470.1 30.790 367 208 9 239 599 112 438 5.98e-45 169
Msa1379470 AT4G14350.3 28.434 415 239 11 194 600 72 436 8.79e-45 168
Msa1379470 AT4G14350.2 28.434 415 239 11 194 600 72 436 9.65e-45 168
Msa1379470 AT4G14350.1 28.434 415 239 11 194 600 72 436 9.65e-45 168
Msa1379470 AT4G14350.4 28.434 415 239 11 194 600 72 436 9.65e-45 168
Msa1379470 AT3G23310.1 30.411 365 210 8 230 587 99 426 3.48e-44 167
Msa1379470 AT1G03920.1 29.612 412 236 9 194 598 90 454 1.85e-43 164
Msa1379470 AT1G03920.3 29.612 412 236 9 194 598 90 454 1.85e-43 164
Msa1379470 AT1G03920.2 31.549 355 199 7 251 598 24 341 2.47e-43 162
Msa1379470 AT2G19400.1 29.041 365 223 10 230 587 84 419 5.26e-41 157
Msa1379470 AT5G58140.4 48.855 131 67 0 225 355 551 681 2.86e-33 136
Msa1379470 AT3G08730.1 30.224 268 147 6 131 398 52 279 4.47e-28 118
Msa1379470 AT3G08730.1 45.133 113 58 3 476 587 285 394 5.40e-24 106
Msa1379470 AT3G08730.2 30.224 268 147 6 131 398 52 279 4.47e-28 118
Msa1379470 AT3G08730.2 45.133 113 58 3 476 587 285 394 5.40e-24 106
Msa1379470 AT3G08720.1 38.710 155 93 1 244 398 133 285 1.18e-27 117
Msa1379470 AT3G08720.1 45.133 113 58 3 476 587 291 400 1.04e-23 105
Msa1379470 AT3G08720.3 38.710 155 93 1 244 398 133 285 1.18e-27 117
Msa1379470 AT3G08720.3 45.133 113 58 3 476 587 291 400 1.04e-23 105
Msa1379470 AT3G08720.4 38.710 155 93 1 244 398 133 285 1.18e-27 117
Msa1379470 AT3G08720.4 45.133 113 58 3 476 587 291 400 1.04e-23 105
Msa1379470 AT3G08720.2 38.710 155 93 1 244 398 133 285 1.18e-27 117
Msa1379470 AT3G08720.2 45.133 113 58 3 476 587 291 400 1.04e-23 105
Msa1379470 AT5G04510.3 39.310 145 86 2 251 395 44 186 1.66e-24 104
Msa1379470 AT5G04510.2 39.310 145 86 2 251 395 44 186 2.32e-24 106
Msa1379470 AT5G04510.2 34.307 137 84 3 463 598 196 327 2.05e-17 85.5
Msa1379470 AT5G04510.1 39.310 145 86 2 251 395 44 186 4.09e-24 106
Msa1379470 AT5G04510.1 34.307 137 84 3 463 598 196 327 2.06e-17 85.9
Msa1379470 AT2G25090.1 26.190 336 174 10 251 583 15 279 1.60e-22 101
Msa1379470 AT3G10540.1 36.076 158 99 2 238 395 32 187 1.61e-22 101
Msa1379470 AT3G10540.1 33.577 137 85 3 463 598 197 328 9.42e-17 84.0
Msa1379470 AT5G18700.1 37.748 151 86 3 248 398 1 143 1.22e-20 97.8
Msa1379470 AT5G57630.2 26.241 282 128 6 244 522 5 209 3.22e-20 94.0
Msa1379470 AT5G57630.1 26.241 282 128 6 244 522 5 209 4.24e-20 93.6
Msa1379470 AT5G25110.1 25.706 354 180 11 234 586 31 302 1.40e-19 92.8
Msa1379470 AT2G45490.2 28.571 231 154 6 243 466 14 240 1.83e-19 89.0
Msa1379470 AT2G45490.2 38.824 85 52 0 475 559 170 254 4.87e-13 70.1
Msa1379470 AT2G45490.1 27.170 265 172 8 243 490 14 274 2.45e-19 89.4
Msa1379470 AT2G45490.1 37.097 124 67 2 475 598 170 282 1.03e-18 87.4
Msa1379470 AT3G01090.3 24.850 334 172 9 250 583 18 272 5.38e-19 91.3
Msa1379470 AT3G01090.1 24.850 334 172 9 250 583 18 272 5.38e-19 91.3
Msa1379470 AT3G61960.1 25.228 329 165 11 248 570 7 260 5.53e-19 91.7
Msa1379470 AT2G25880.1 33.735 166 108 1 234 399 8 171 5.55e-19 88.2
Msa1379470 AT2G25880.1 37.963 108 63 1 475 582 173 276 5.89e-16 79.3
Msa1379470 AT4G32830.1 34.868 152 97 1 248 399 28 177 5.77e-19 88.2
Msa1379470 AT4G32830.1 33.333 126 73 2 475 600 179 293 2.33e-15 77.8
Msa1379470 AT2G25880.4 33.735 166 108 1 234 399 21 184 5.86e-19 88.6
Msa1379470 AT2G25880.4 37.963 108 63 1 475 582 186 289 5.95e-16 79.7
Msa1379470 AT3G01090.2 24.850 334 172 9 250 583 41 295 6.35e-19 90.9
Msa1379470 AT3G61960.2 25.228 329 165 11 248 570 7 260 6.42e-19 91.3
Msa1379470 AT2G25880.3 33.735 166 108 1 234 399 69 232 9.71e-19 88.6
Msa1379470 AT2G25880.3 38.318 107 62 1 475 581 234 336 1.75e-15 79.0
Msa1379470 AT1G12680.1 34.194 155 90 5 255 407 111 255 5.34e-18 87.8
Msa1379470 AT5G10930.1 25.776 322 163 9 249 568 10 257 8.86e-18 87.0
Msa1379470 AT2G30360.1 26.254 339 167 10 248 582 18 277 9.09e-18 86.7
Msa1379470 AT1G50240.3 24.398 332 170 10 251 582 6 256 2.09e-17 87.4
Msa1379470 AT1G50240.2 24.398 332 170 10 251 582 6 256 2.09e-17 87.4
Msa1379470 AT3G29160.3 23.433 367 201 10 250 616 19 305 2.45e-17 84.7
Msa1379470 AT2G20050.1 37.931 116 66 3 478 590 934 1046 2.69e-17 86.7
Msa1379470 AT2G20050.2 37.931 116 66 3 478 590 931 1043 2.85e-17 86.7
Msa1379470 AT4G18700.1 32.026 153 101 1 246 398 21 170 4.69e-17 85.1
Msa1379470 AT4G24400.1 29.697 165 114 2 247 411 5 167 4.99e-17 84.7
Msa1379470 AT3G29160.1 23.433 367 201 10 250 616 19 305 6.83e-17 84.7
Msa1379470 AT3G29160.2 23.433 367 201 10 250 616 19 305 6.83e-17 84.7
Msa1379470 AT4G24400.2 29.697 165 114 2 247 411 5 167 7.23e-17 84.0
Msa1379470 AT3G17510.1 33.333 159 103 3 240 398 10 165 7.29e-17 84.0
Msa1379470 AT5G45810.1 30.719 153 103 1 246 398 23 172 1.22e-16 83.6
Msa1379470 AT2G34180.1 26.224 286 134 9 240 522 46 257 2.02e-16 83.2
Msa1379470 AT2G38490.1 37.255 153 87 4 249 398 26 172 2.88e-16 82.0
Msa1379470 AT5G45820.1 30.573 157 106 2 242 398 3 156 3.39e-16 82.0
Msa1379470 AT2G25880.2 37.963 108 63 1 475 582 141 244 3.95e-16 79.3
Msa1379470 AT4G14580.1 24.695 328 170 11 244 568 14 267 1.08e-15 80.1
Msa1379470 AT1G29230.1 30.719 153 99 2 248 398 71 218 1.38e-15 80.5
Msa1379470 AT5G28290.1 29.870 154 102 3 248 398 1 151 1.42e-15 80.5
Msa1379470 AT5G28290.2 29.870 154 102 3 248 398 1 151 1.42e-15 80.5
Msa1379470 AT5G28290.3 29.870 154 102 3 248 398 1 151 1.49e-15 80.5
Msa1379470 AT3G44200.2 27.922 154 105 3 248 398 5 155 2.34e-15 80.5
Msa1379470 AT3G44200.1 27.922 154 105 3 248 398 5 155 2.34e-15 80.5
Msa1379470 AT3G04810.2 28.571 154 104 3 248 398 1 151 2.60e-15 79.7
Msa1379470 AT3G04810.1 28.571 154 104 3 248 398 1 151 2.60e-15 79.7
Msa1379470 AT3G04810.3 28.571 154 104 3 248 398 1 151 2.60e-15 79.7
Msa1379470 AT5G21326.1 32.680 153 97 4 248 398 10 158 4.75e-15 78.2
Msa1379470 AT3G20860.1 25.166 151 112 1 248 398 1 150 5.47e-15 78.2
Msa1379470 AT1G54510.4 27.922 154 105 3 248 398 1 151 6.50e-15 78.6
Msa1379470 AT1G54510.2 27.922 154 105 3 248 398 1 151 6.50e-15 78.6
Msa1379470 AT1G54510.1 27.922 154 105 3 248 398 1 151 6.50e-15 78.6
Msa1379470 AT1G54510.3 27.922 154 105 3 248 398 1 151 6.50e-15 78.6
Msa1379470 AT5G58380.1 21.557 334 183 8 251 583 12 267 6.99e-15 78.2
Msa1379470 AT3G63280.4 28.025 157 107 3 245 398 52 205 8.26e-15 78.2
Msa1379470 AT3G63280.2 28.571 154 104 3 248 398 1 151 8.60e-15 78.2
Msa1379470 AT3G63280.3 28.571 154 104 3 248 398 1 151 8.60e-15 78.2
Msa1379470 AT3G63280.1 28.571 154 104 3 248 398 1 151 8.60e-15 78.2
Msa1379470 AT2G26980.2 31.098 164 102 5 237 398 5 159 9.60e-15 75.5
Msa1379470 AT3G21220.2 23.881 335 167 12 254 582 73 325 1.01e-14 76.6
Msa1379470 AT3G21220.1 23.881 335 167 12 254 582 73 325 1.01e-14 76.6
Msa1379470 AT5G35410.2 29.221 154 107 2 245 398 5 156 1.17e-14 76.6
Msa1379470 AT5G01810.3 33.333 159 99 4 242 398 3 156 1.22e-14 76.6
Msa1379470 AT5G01810.1 33.333 159 99 4 242 398 3 156 1.41e-14 76.6
Msa1379470 AT5G01810.2 33.333 159 99 4 242 398 3 156 1.41e-14 76.6
Msa1379470 AT3G06030.1 29.126 206 123 6 232 431 59 247 1.47e-14 77.4
Msa1379470 AT2G26980.1 31.098 164 102 5 237 398 5 159 1.61e-14 76.3
Msa1379470 AT1G35670.1 31.818 154 99 4 250 399 25 176 1.75e-14 77.0
Msa1379470 AT2G26980.3 31.098 164 102 5 237 398 5 159 1.76e-14 76.6
Msa1379470 AT2G26980.4 31.098 164 102 5 237 398 15 169 1.87e-14 76.6
Msa1379470 AT5G01820.1 35.849 159 94 5 242 398 14 166 2.18e-14 76.3
Msa1379470 AT1G54960.1 32.530 166 93 6 239 398 66 218 2.25e-14 77.0
Msa1379470 AT1G54960.2 32.530 166 93 6 239 398 66 218 2.25e-14 77.0
Msa1379470 AT2G26980.5 31.098 164 102 5 237 398 5 159 2.62e-14 75.9
Msa1379470 AT5G35410.1 29.221 154 107 2 245 398 5 156 2.85e-14 75.9
Msa1379470 AT5G39440.1 33.557 149 97 2 250 398 18 164 4.21e-14 75.9
Msa1379470 AT5G39440.1 37.624 101 57 3 484 584 178 272 8.75e-11 65.1
Msa1379470 AT1G01140.3 29.341 167 111 3 232 398 5 164 5.27e-14 75.1
Msa1379470 AT1G01140.2 29.341 167 111 3 232 398 5 164 5.61e-14 75.1
Msa1379470 AT1G69220.1 30.323 155 99 3 251 402 249 397 5.66e-14 75.9
Msa1379470 AT1G01140.1 29.341 167 111 3 232 398 5 164 5.82e-14 75.1
Msa1379470 AT1G09000.2 28.774 212 130 8 251 449 69 272 7.02e-14 75.5
Msa1379470 AT1G53570.6 29.412 187 119 5 255 438 218 394 8.11e-14 75.1
Msa1379470 AT1G53570.7 29.412 187 119 5 255 438 218 394 8.64e-14 74.7
Msa1379470 AT1G09000.1 30.319 188 116 7 251 431 69 248 8.89e-14 75.1
Msa1379470 AT1G53570.2 29.412 187 119 5 255 438 218 394 1.01e-13 74.7
Msa1379470 AT1G53570.3 29.412 187 119 5 255 438 218 394 1.01e-13 74.7
Msa1379470 AT1G53570.1 29.412 187 119 5 255 438 218 394 1.05e-13 74.7
Msa1379470 AT1G30270.1 29.412 153 102 3 248 398 28 176 1.06e-13 74.3
Msa1379470 AT1G53570.4 29.412 187 119 5 255 438 218 394 1.08e-13 74.7
Msa1379470 AT1G30270.2 29.412 153 102 3 248 398 28 176 1.12e-13 74.3
Msa1379470 AT3G23000.1 31.013 158 94 4 248 398 22 171 1.38e-13 73.6
Msa1379470 AT1G48260.1 32.026 153 102 2 246 398 6 156 2.31e-13 73.2
Msa1379470 AT4G09570.1 31.818 154 99 4 250 399 24 175 2.60e-13 73.2
Msa1379470 AT2G17890.1 29.834 181 114 5 251 426 108 280 3.35e-13 73.2
Msa1379470 AT4G26070.1 30.460 174 114 5 239 410 56 224 3.64e-13 71.2
Msa1379470 AT4G26070.4 30.516 213 124 8 213 410 20 223 3.67e-13 71.6
Msa1379470 AT5G45430.1 29.947 187 113 7 248 431 1 172 4.08e-13 72.8
Msa1379470 AT5G45430.2 29.947 187 113 7 248 431 1 172 4.10e-13 72.4
Msa1379470 AT3G10660.2 30.556 180 112 5 251 426 186 356 4.24e-13 72.8
Msa1379470 AT3G10660.1 30.556 180 112 5 251 426 186 356 4.24e-13 72.8
Msa1379470 AT4G26070.5 30.460 174 114 5 239 410 43 211 4.57e-13 71.2
Msa1379470 AT4G19110.2 28.649 185 118 5 248 431 1 172 5.36e-13 72.0
Msa1379470 AT4G26070.2 30.460 174 114 5 239 410 56 224 5.76e-13 71.2
Msa1379470 AT4G26070.3 30.460 174 114 5 239 410 56 224 5.76e-13 71.2
Msa1379470 AT4G19110.1 28.649 185 118 5 248 431 1 172 6.91e-13 71.6
Msa1379470 AT1G50700.3 33.333 153 96 4 251 399 73 223 6.96e-13 71.6
Msa1379470 AT1G50700.1 33.333 153 96 4 251 399 73 223 1.13e-12 71.2
Msa1379470 AT1G50700.2 33.333 153 96 4 251 399 73 223 1.40e-12 71.2
Msa1379470 AT1G32320.1 31.034 145 92 2 254 398 51 187 1.62e-12 69.3
Msa1379470 AT4G04720.2 30.719 153 100 4 251 399 80 230 1.88e-12 70.5
Msa1379470 AT4G04720.1 30.719 153 100 4 251 399 80 230 1.88e-12 70.5
Msa1379470 AT1G53165.2 28.105 153 106 2 250 402 14 162 2.07e-12 70.9
Msa1379470 AT1G53165.1 28.105 153 106 2 250 402 14 162 2.09e-12 70.9
Msa1379470 AT1G53165.3 28.105 153 106 2 250 402 14 162 2.13e-12 70.9
Msa1379470 AT3G20410.2 32.026 153 98 4 251 399 91 241 2.15e-12 70.5
Msa1379470 AT3G20410.1 32.026 153 98 4 251 399 91 241 2.15e-12 70.5
Msa1379470 AT2G35890.2 27.119 236 150 8 202 426 78 302 2.41e-12 70.1
Msa1379470 AT2G35890.1 27.119 236 150 8 202 426 78 302 2.41e-12 70.1
Msa1379470 AT4G35310.2 27.869 183 123 5 251 431 97 272 3.76e-12 69.7
Msa1379470 AT4G35310.1 27.869 183 123 5 251 431 97 272 3.76e-12 69.7
Msa1379470 AT4G30960.1 29.677 155 105 3 244 398 18 168 3.96e-12 69.3
Msa1379470 AT2G41860.1 32.026 153 98 4 251 399 54 204 4.23e-12 69.3
Msa1379470 AT2G41860.2 32.026 153 98 4 251 399 54 204 4.38e-12 69.3
Msa1379470 AT1G12580.1 27.434 226 146 7 206 426 2 214 4.54e-12 69.3
Msa1379470 AT1G69220.2 30.137 146 93 3 260 402 231 370 5.65e-12 69.7
Msa1379470 AT2G38910.1 29.609 179 115 6 251 426 134 304 7.95e-12 68.6
Msa1379470 AT2G41140.1 29.032 186 113 6 250 426 122 297 1.19e-11 68.2
Msa1379470 AT5G04870.1 30.000 180 113 5 251 426 150 320 1.23e-11 68.2
Msa1379470 AT5G24430.1 25.946 185 122 5 249 426 141 317 1.40e-11 68.2
Msa1379470 AT1G73500.1 29.630 162 97 5 254 412 50 197 1.46e-11 66.6
Msa1379470 AT3G57530.2 33.557 149 93 4 255 399 67 213 1.75e-11 67.0
Msa1379470 AT3G56760.1 31.288 163 102 5 250 405 123 282 1.85e-11 67.4
Msa1379470 AT5G57565.2 32.520 123 72 3 310 428 14 129 2.01e-11 62.4
Msa1379470 AT5G57565.6 32.520 123 72 3 310 428 14 129 2.01e-11 62.4
Msa1379470 AT2G31500.1 34.228 149 92 4 255 399 70 216 2.31e-11 67.4
Msa1379470 AT1G63700.1 23.707 232 156 4 239 451 388 617 2.56e-11 67.4
Msa1379470 AT1G63700.2 23.707 232 156 4 239 451 388 617 2.56e-11 67.4
Msa1379470 AT3G57530.1 33.557 149 93 4 255 399 67 213 2.72e-11 67.0
Msa1379470 AT4G10010.2 33.775 151 93 5 251 398 156 302 2.78e-11 67.0
Msa1379470 AT4G36070.1 27.473 182 119 5 250 426 70 243 2.97e-11 66.6
Msa1379470 AT2G17290.1 29.936 157 106 4 251 405 85 239 3.27e-11 66.6
Msa1379470 AT2G17290.2 29.936 157 106 4 251 405 85 239 3.27e-11 66.6
Msa1379470 AT1G78290.3 32.258 155 93 5 248 398 1 147 3.40e-11 65.9
Msa1379470 AT1G78290.2 32.258 155 93 5 248 398 1 147 3.40e-11 65.9
Msa1379470 AT4G36070.2 27.473 182 119 5 250 426 70 243 3.64e-11 66.6
Msa1379470 AT5G66210.3 27.072 181 121 3 250 426 61 234 3.70e-11 66.2
Msa1379470 AT5G19360.1 31.373 153 99 4 251 399 68 218 4.09e-11 66.2
Msa1379470 AT5G66210.6 27.072 181 121 3 250 426 61 234 4.18e-11 65.9
Msa1379470 AT5G66210.4 27.072 181 121 3 250 426 61 234 4.18e-11 65.9
Msa1379470 AT5G66210.5 27.072 181 121 3 250 426 61 234 4.25e-11 66.2
Msa1379470 AT5G12180.1 31.373 153 99 4 251 399 73 223 4.83e-11 66.2
Msa1379470 AT3G05050.3 30.405 148 102 1 251 398 138 284 5.07e-11 66.2
Msa1379470 AT3G05050.2 30.405 148 102 1 251 398 138 284 5.07e-11 66.2
Msa1379470 AT3G05050.1 30.405 148 102 1 251 398 138 284 5.07e-11 66.2
Msa1379470 AT5G66210.1 27.072 181 121 3 250 426 61 234 5.55e-11 65.9
Msa1379470 AT5G66210.2 27.072 181 121 3 250 426 61 234 5.55e-11 65.9
Msa1379470 AT5G12480.1 29.870 154 102 4 250 399 58 209 5.92e-11 65.9
Msa1379470 AT3G15220.1 26.623 154 109 2 249 402 13 162 6.25e-11 65.9
Msa1379470 AT4G29810.1 29.121 182 116 5 234 410 53 226 6.85e-11 65.1
Msa1379470 AT4G29810.2 29.121 182 116 5 234 410 62 235 8.07e-11 64.7
Msa1379470 AT1G66750.1 34.211 152 89 6 252 398 12 157 8.49e-11 64.3
Msa1379470 AT5G19450.2 30.719 153 100 4 251 399 57 207 8.65e-11 65.5
Msa1379470 AT5G19450.1 30.719 153 100 4 251 399 57 207 8.65e-11 65.5
Msa1379470 AT1G73690.1 33.775 151 91 5 252 398 10 155 8.88e-11 64.7
Msa1379470 AT4G29810.3 29.121 182 116 5 234 410 62 235 9.02e-11 64.3
Msa1379470 AT5G23580.1 31.333 150 97 4 257 402 28 175 9.63e-11 65.1
Msa1379470 AT3G49370.1 28.834 163 103 5 243 398 139 295 9.90e-11 65.1

Find 138 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTGGCTGACTGTCTT+AGG 0.142901 tig0020279:+120952 Msa1379470:CDS
ATGTTGTTGGGCAGCCTTTA+AGG 0.173778 tig0020279:+120109 Msa1379470:CDS
TCCTTGATTATTTCTATATA+AGG 0.186285 tig0020279:-117809 None:intergenic
CCTTCACCTTTGATAATTTC+AGG 0.209471 tig0020279:-119982 None:intergenic
TTATGTTGTTCCAGGTTTCT+TGG 0.220916 tig0020279:+120938 Msa1379470:intron
GGAGATTCTGGAAACCTTAA+AGG 0.266914 tig0020279:-120123 None:intergenic
CGAACACCATTCAAAGGTTC+TGG 0.282954 tig0020279:+120066 Msa1379470:CDS
AGACATTATCATCATAATTA+TGG 0.289252 tig0020279:+117865 Msa1379470:CDS
GAATGGATGTTGTTTGATTT+CGG 0.318757 tig0020279:-120232 None:intergenic
AAGCTGACAGTAGGAGATTC+TGG 0.319263 tig0020279:-120135 None:intergenic
CTTATATCATTTGCCTTATG+AGG 0.331403 tig0020279:-118363 None:intergenic
TCTATAGGCAAGACGGTGTT+GGG 0.334697 tig0020279:-120199 None:intergenic
TGCAGAAGTTCTGCTTGCTT+TGG 0.345070 tig0020279:+119582 Msa1379470:CDS
TCGCGAGGGGATGTTGGAAA+TGG 0.346924 tig0020279:+118413 Msa1379470:CDS
TTTCTTGGCTGACTGTCTTA+GGG 0.351781 tig0020279:+120953 Msa1379470:CDS
CCTTGATTATTTCTATATAA+GGG 0.352324 tig0020279:-117808 None:intergenic
TCTGGCTGCATTGCACATGC+TGG 0.356299 tig0020279:-119787 None:intergenic
CGCGAGGGGATGTTGGAAAT+GGG 0.363431 tig0020279:+118414 Msa1379470:CDS
TTCTTATACGAACTCTTGTT+TGG 0.364317 tig0020279:+120042 Msa1379470:CDS
CATTCTTTCACAATGTGAAC+TGG 0.366931 tig0020279:+120250 Msa1379470:CDS
CGGGGAATCCCTGATGTTAT+AGG 0.370257 tig0020279:-117772 None:intergenic
AGATTGGGAAGTGGAGATAT+AGG 0.370938 tig0020279:+118456 Msa1379470:CDS
TAAGGGAGGCCGCGAAGAAC+GGG 0.378316 tig0020279:-117791 None:intergenic
TAACTACATAGCTGTTTAGA+TGG 0.380890 tig0020279:-117903 None:intergenic
ACCACGATGTTTAATGTTGT+TGG 0.384486 tig0020279:+120096 Msa1379470:CDS
AGTGAGTGTGTGAGTGTTGA+TGG 0.390003 tig0020279:+118201 Msa1379470:CDS
GAAGTTGGAATGAACCCTTC+TGG 0.395335 tig0020279:+120348 Msa1379470:CDS
GTTGGCTCTGCGACTAGCTC+AGG 0.397789 tig0020279:-119913 None:intergenic
CAGAACCTTTGAATGGTGTT+CGG 0.404895 tig0020279:-120065 None:intergenic
CTGTGGATTGGTGGACGTTC+GGG 0.406089 tig0020279:+120016 Msa1379470:CDS
GCTGTGGATTGGTGGACGTT+CGG 0.420545 tig0020279:+120015 Msa1379470:CDS
TTCGGTAGCTCCGCGTCTAT+AGG 0.426540 tig0020279:-120214 None:intergenic
TCATTAAAATCACTGAAATT+CGG 0.427397 tig0020279:-118249 None:intergenic
TACTGTCAGCTTTGCTGCAA+GGG 0.433649 tig0020279:+120146 Msa1379470:CDS
GTCTATAGGCAAGACGGTGT+TGG 0.435613 tig0020279:-120200 None:intergenic
TTGGAGTACTTGCACATGCT+TGG 0.440491 tig0020279:+119601 Msa1379470:CDS
GACATTGACCGCGCACTTGT+TGG 0.440756 tig0020279:-119931 None:intergenic
TTCATCATCATGGTCTGTCT+TGG 0.441424 tig0020279:-120306 None:intergenic
TTTAGAATATTGAAGAGATT+GGG 0.441585 tig0020279:+118441 Msa1379470:CDS
GACACTCTCTTGCTTGGTAA+TGG 0.442984 tig0020279:+118653 Msa1379470:CDS
CCACGATGTTTAATGTTGTT+GGG 0.443702 tig0020279:+120097 Msa1379470:CDS
GGTACTCCCTCTACAGATAC+TGG 0.445373 tig0020279:-118283 None:intergenic
TGAGTTTGGTTTCATCATCA+TGG 0.445934 tig0020279:-120316 None:intergenic
GACTGAGAATAGTAATTCTT+CGG 0.446631 tig0020279:-118087 None:intergenic
TTCATCGCTAACATCACTTC+CGG 0.448222 tig0020279:-118304 None:intergenic
TGTAGGCACACACGAGTACT+TGG 0.448323 tig0020279:+119957 Msa1379470:CDS
CGATTCCCAGAACCTTTGAA+TGG 0.449595 tig0020279:-120072 None:intergenic
GCTCAGGGAGAGGTGTCATT+TGG 0.450141 tig0020279:-119897 None:intergenic
CACAGCCTTCCTATAACATC+AGG 0.452461 tig0020279:+117763 Msa1379470:CDS
AAGAAACAATGAAAGGTTGC+CGG 0.455081 tig0020279:+117948 Msa1379470:CDS
AACTCAACTGAAAATGAAGT+TGG 0.456517 tig0020279:+120333 Msa1379470:CDS
ATAGTTTCAACTGCAGTCAT+AGG 0.457366 tig0020279:-117700 None:intergenic
TGCTGGCTGAATGCAGTATC+CGG 0.457718 tig0020279:-119770 None:intergenic
TGCTTTGTATAAACCTCATA+AGG 0.460243 tig0020279:+118350 Msa1379470:CDS
GCAATCAGGCAAAGACAACC+TGG 0.462233 tig0020279:+118702 Msa1379470:CDS
AGATATAGGAAATGTATATC+TGG 0.464842 tig0020279:+118470 Msa1379470:CDS
GTGGCGACCTTCATGCAATC+AGG 0.465958 tig0020279:+118688 Msa1379470:CDS
GCGCGGTCAATGTCCTTTGT+AGG 0.466444 tig0020279:+119940 Msa1379470:CDS
GTATATCTGGCTGAACTTAG+TGG 0.471940 tig0020279:+118483 Msa1379470:CDS
TTTGTTGACTTCACTAGAGT+TGG 0.473963 tig0020279:-119724 None:intergenic
ATGGTCTGTCTTGGTACCTC+TGG 0.474291 tig0020279:-120297 None:intergenic
ATAAGGCAAATGATATAAGA+TGG 0.476777 tig0020279:+118367 Msa1379470:CDS
TTAACAACGGCTCGTTTCGA+TGG 0.483495 tig0020279:-118060 None:intergenic
GACTGAGACACTCTCTTGCT+TGG 0.489683 tig0020279:+118647 Msa1379470:CDS
AGGAAAACCAGTATCTGTAG+AGG 0.497846 tig0020279:+118276 Msa1379470:CDS
CTACTGTCAGCTTTGCTGCA+AGG 0.509881 tig0020279:+120145 Msa1379470:CDS
ATCACTGAAACTAAAAGCTC+CGG 0.510058 tig0020279:+119751 Msa1379470:CDS
CCGAGCTCGCGAGGGGATGT+TGG 0.511381 tig0020279:+118407 Msa1379470:CDS
CAGGGATTCCCCGTTCTTCG+CGG 0.512241 tig0020279:+117782 Msa1379470:CDS
CTTCTTACGAGTTGCAAGCT+CGG 0.513729 tig0020279:-118544 None:intergenic
AAAACAAACTAAGACAACTT+AGG 0.515460 tig0020279:-120999 None:intergenic
CATGCATGTTGGATGCAGTC+TGG 0.515667 tig0020279:-119805 None:intergenic
GTCTTTGCCTGATTGCATGA+AGG 0.516240 tig0020279:-118695 None:intergenic
CAGTTCACATTGTGAAAGAA+TGG 0.524170 tig0020279:-120249 None:intergenic
CCAACATCCCCTCGCGAGCT+CGG 0.527137 tig0020279:-118407 None:intergenic
TAGTAACTGTTCTGAGGACT+AGG 0.528414 tig0020279:-118126 None:intergenic
TCAAAGTGGGTATATAATGT+AGG 0.528535 tig0020279:-118624 None:intergenic
ACACTCACTGACTTCAGTAC+TGG 0.535887 tig0020279:-118187 None:intergenic
TCAAGCTGTCCGAGCTCGCG+AGG 0.536729 tig0020279:+118398 Msa1379470:CDS
ATAAGGGAGGCCGCGAAGAA+CGG 0.539279 tig0020279:-117792 None:intergenic
GGTTCAGAATTCAGTTTCTG+AGG 0.551440 tig0020279:+117729 Msa1379470:CDS
ATATTGAAGAGATTGGGAAG+TGG 0.554065 tig0020279:+118447 Msa1379470:CDS
ATTCTAAATAATTACCAGAA+GGG 0.554776 tig0020279:-120362 None:intergenic
CCCTTATATAGAAATAATCA+AGG 0.559154 tig0020279:+117808 Msa1379470:CDS
TAAGGCAAATGATATAAGAT+GGG 0.559236 tig0020279:+118368 Msa1379470:CDS
ATGGAAGTGCTGTGGATTGG+TGG 0.563144 tig0020279:+120007 Msa1379470:CDS
GAACACCATTCAAAGGTTCT+GGG 0.567648 tig0020279:+120067 Msa1379470:CDS
TTTGGCCGAACACCATTCAA+AGG 0.568709 tig0020279:+120060 Msa1379470:CDS
ATAGGAAGGCTGTGGCGTAT+CGG 0.571857 tig0020279:-117754 None:intergenic
ATTGCATGAAGGTCGCCACC+AGG 0.579987 tig0020279:-118684 None:intergenic
ATTATCAAAGGTGAAGGACA+TGG 0.585663 tig0020279:+119988 Msa1379470:CDS
GAAGCTACTGAGGGCTCAGA+CGG 0.588647 tig0020279:+118563 Msa1379470:CDS
ATTCTTTCACAATGTGAACT+GGG 0.590369 tig0020279:+120251 Msa1379470:CDS
GACATGGAAGTGCTGTGGAT+TGG 0.591538 tig0020279:+120004 Msa1379470:CDS
GTCTGTCTTGGTACCTCTGG+CGG 0.591624 tig0020279:-120294 None:intergenic
GGAAAACCAGTATCTGTAGA+GGG 0.593884 tig0020279:+118277 Msa1379470:CDS
TTGGCTCTGCGACTAGCTCA+GGG 0.594167 tig0020279:-119912 None:intergenic
GCTGCAAGGGACTTGATCAG+AGG 0.595287 tig0020279:+120159 Msa1379470:CDS
GCGAGGGGATGTTGGAAATG+GGG 0.597867 tig0020279:+118415 Msa1379470:CDS
CCTGAAATTATCAAAGGTGA+AGG 0.598793 tig0020279:+119982 Msa1379470:CDS
AGTATCTGTAGAGGGAGTAC+CGG 0.600565 tig0020279:+118285 Msa1379470:CDS
TTCTTGGCTGACTGTCTTAG+GGG 0.601605 tig0020279:+120954 Msa1379470:CDS
TGCAGTTGAAACTATTGCAG+AGG 0.606600 tig0020279:+117708 Msa1379470:CDS
ATCACGAAAGAAACAATGAA+AGG 0.611280 tig0020279:+117941 Msa1379470:CDS
ATTCTTCGGTTGATTAACAA+CGG 0.617928 tig0020279:-118073 None:intergenic
AAGCTGTCCGAGCTCGCGAG+GGG 0.618922 tig0020279:+118400 Msa1379470:CDS
CACCGTCTTGCCTATAGACG+CGG 0.620769 tig0020279:+120204 Msa1379470:CDS
CAACTCGTAAGAAGCTACTG+AGG 0.620806 tig0020279:+118553 Msa1379470:CDS
CAAGCTGTCCGAGCTCGCGA+GGG 0.623020 tig0020279:+118399 Msa1379470:CDS
TGATTATTTCTATATAAGGG+AGG 0.623039 tig0020279:-117805 None:intergenic
TTGGCGCCTGAAATTATCAA+AGG 0.624538 tig0020279:+119976 Msa1379470:CDS
TTTCGCTTCTGAATAGACAG+TGG 0.629335 tig0020279:-118154 None:intergenic
CTTGCAGCAAAGCTGACAGT+AGG 0.631317 tig0020279:-120144 None:intergenic
AATGTGTTGGTGAGAGAAGA+CGG 0.638684 tig0020279:+119652 Msa1379470:CDS
TCTGCGACTAGCTCAGGGAG+AGG 0.639914 tig0020279:-119907 None:intergenic
AACTCGTAAGAAGCTACTGA+GGG 0.642428 tig0020279:+118554 Msa1379470:CDS
GAATCCCTGATGTTATAGGA+AGG 0.643848 tig0020279:-117768 None:intergenic
CTTCACTAGAGTTGGACTGA+CGG 0.644980 tig0020279:-119716 None:intergenic
TGGCTGAACTTAGTGGCACA+AGG 0.648258 tig0020279:+118490 Msa1379470:CDS
AGAGTGTCTCAGTCTCAAAG+TGG 0.650439 tig0020279:-118638 None:intergenic
CTGATGTTATAGGAAGGCTG+TGG 0.652569 tig0020279:-117762 None:intergenic
GAGTGTCTCAGTCTCAAAGT+GGG 0.652922 tig0020279:-118637 None:intergenic
GCTGAATAGTAACTGTTCTG+AGG 0.653333 tig0020279:-118132 None:intergenic
CCTTAAGCCTGAAAATGTGT+TGG 0.653684 tig0020279:+119639 Msa1379470:CDS
CTATAGGCAAGACGGTGTTG+GGG 0.657836 tig0020279:-120198 None:intergenic
GTACTCGTGTGTGCCTACAA+AGG 0.659826 tig0020279:-119953 None:intergenic
AAGGGAGGCCGCGAAGAACG+GGG 0.663699 tig0020279:-117790 None:intergenic
CAATCAGGCAAAGACAACCT+GGG 0.663791 tig0020279:+118703 Msa1379470:CDS
CCGCTGCGCTAATCCGCCAG+AGG 0.665665 tig0020279:+120281 Msa1379470:CDS
TGAAGGACATGGAAGTGCTG+TGG 0.668077 tig0020279:+119999 Msa1379470:CDS
GTGGCGAAAAGCATGCATGT+TGG 0.669257 tig0020279:-119816 None:intergenic
CTCCGCGTCTATAGGCAAGA+CGG 0.671798 tig0020279:-120206 None:intergenic
TCGCAGAGCCAACAAGTGCG+CGG 0.675937 tig0020279:+119923 Msa1379470:CDS
ACAGCCTTCCTATAACATCA+GGG 0.679147 tig0020279:+117764 Msa1379470:CDS
AGCAACACGAGTAGTTTGAG+CGG 0.684691 tig0020279:+118327 Msa1379470:CDS
CCTCTGGCGGATTAGCGCAG+CGG 0.690338 tig0020279:-120281 None:intergenic
GATGGTAAGTCGTGTGAGAG+CGG 0.692630 tig0020279:+118219 Msa1379470:CDS
CCCAACAACATTAAACATCG+TGG 0.694205 tig0020279:-120097 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTATTCTAATAATTAAT+TGG - tig0020279:120639-120658 None:intergenic 10.0%
!!! TTTTTTTCCTTCTAATATAA+TGG + tig0020279:119185-119204 Msa1379470:intron 15.0%
!!! ATAATATGTTTTCATTAATG+TGG - tig0020279:119389-119408 None:intergenic 15.0%
!!! CCTTGATTATTTCTATATAA+GGG - tig0020279:117811-117830 None:intergenic 20.0%
!!! TCCTTGATTATTTCTATATA+AGG - tig0020279:117812-117831 None:intergenic 20.0%
!! AGACATTATCATCATAATTA+TGG + tig0020279:117865-117884 Msa1379470:CDS 20.0%
!! TCATTAAAATCACTGAAATT+CGG - tig0020279:118252-118271 None:intergenic 20.0%
!!! TTTTAGAATATTGAAGAGAT+TGG + tig0020279:118440-118459 Msa1379470:CDS 20.0%
!!! TTTAGAATATTGAAGAGATT+GGG + tig0020279:118441-118460 Msa1379470:CDS 20.0%
!! GTATATAATGTAGGTAAAAA+AGG - tig0020279:118618-118637 None:intergenic 20.0%
!! ATATACAACTCAAATTGAAT+AGG - tig0020279:118843-118862 None:intergenic 20.0%
!!! TAAGCTCTAAGAAATTATAT+CGG - tig0020279:119088-119107 None:intergenic 20.0%
!! GTAAAATCCATTATATTAGA+AGG - tig0020279:119195-119214 None:intergenic 20.0%
!! GAAACAGATATCAATTAATT+TGG + tig0020279:119335-119354 Msa1379470:intron 20.0%
!! ACTTGTATAATAAACACTTA+TGG + tig0020279:119467-119486 Msa1379470:intron 20.0%
!!! ATTTCTCTAATTTTCGTTTT+CGG + tig0020279:119540-119559 Msa1379470:intron 20.0%
!! ATTCTAAATAATTACCAGAA+GGG - tig0020279:120365-120384 None:intergenic 20.0%
!! AATTCTAAATAATTACCAGA+AGG - tig0020279:120366-120385 None:intergenic 20.0%
!! AGTATGTTATATAGGAAAAT+GGG - tig0020279:120580-120599 None:intergenic 20.0%
!! AAGTATGTTATATAGGAAAA+TGG - tig0020279:120581-120600 None:intergenic 20.0%
!!! ATAGAGAAAGTATGTTATAT+AGG - tig0020279:120588-120607 None:intergenic 20.0%
!!! AATAGTATTTACTCTTTTGT+CGG + tig0020279:120651-120670 Msa1379470:intron 20.0%
!!! TGATTATTTCTATATAAGGG+AGG - tig0020279:117808-117827 None:intergenic 25.0%
! CCCTTATATAGAAATAATCA+AGG + tig0020279:117808-117827 Msa1379470:CDS 25.0%
! ATAAGGCAAATGATATAAGA+TGG + tig0020279:118367-118386 Msa1379470:CDS 25.0%
! TAAGGCAAATGATATAAGAT+GGG + tig0020279:118368-118387 Msa1379470:CDS 25.0%
! AGATATAGGAAATGTATATC+TGG + tig0020279:118470-118489 Msa1379470:CDS 25.0%
! CAGATAGATATATAATTGCA+GGG - tig0020279:118785-118804 None:intergenic 25.0%
! ACAGATAGATATATAATTGC+AGG - tig0020279:118786-118805 None:intergenic 25.0%
!! CTAAAGAAATTACATTGACT+AGG - tig0020279:118875-118894 None:intergenic 25.0%
! AACCAGTTTAATTAAGTACT+TGG + tig0020279:118907-118926 Msa1379470:intron 25.0%
! TTCCAAGTACTTAATTAAAC+TGG - tig0020279:118912-118931 None:intergenic 25.0%
! ATTAAGTACTTGGAATATAG+CGG + tig0020279:118917-118936 Msa1379470:intron 25.0%
!! TATAGCGGAAATAAATTACA+TGG + tig0020279:118932-118951 Msa1379470:intron 25.0%
! GATATAATTTCTTAGAGCTT+AGG + tig0020279:119087-119106 Msa1379470:intron 25.0%
! AAGTAAGATGTTTATCCTAT+AGG + tig0020279:119501-119520 Msa1379470:intron 25.0%
! AGTAAGATGTTTATCCTATA+GGG + tig0020279:119502-119521 Msa1379470:intron 25.0%
!! TTTCTCTAATTTTCGTTTTC+GGG + tig0020279:119541-119560 Msa1379470:intron 25.0%
!!! TTTTTTCTCTTTGGATTTTC+CGG - tig0020279:119851-119870 None:intergenic 25.0%
!!! TAGTCTGAATTTTTTCTCTT+TGG - tig0020279:119860-119879 None:intergenic 25.0%
!! ATCTTTTATTCAATAGAGGA+AGG - tig0020279:120441-120460 None:intergenic 25.0%
!! TGCAATCTTTTATTCAATAG+AGG - tig0020279:120445-120464 None:intergenic 25.0%
! ATTTGCCAAATTGTTGATAT+TGG + tig0020279:120803-120822 Msa1379470:intron 25.0%
!!! TATGTTTTTTATGTTGTTCC+AGG + tig0020279:120930-120949 Msa1379470:intron 25.0%
!!! TTCTTCTTCCAGATCTTTTT+TGG + tig0020279:117837-117856 Msa1379470:CDS 30.0%
TCTTTGTTCCAAAAAAGATC+TGG - tig0020279:117848-117867 None:intergenic 30.0%
TAACTACATAGCTGTTTAGA+TGG - tig0020279:117906-117925 None:intergenic 30.0%
ATCACGAAAGAAACAATGAA+AGG + tig0020279:117941-117960 Msa1379470:CDS 30.0%
AGAACTTGAGTCAAAAATCT+CGG - tig0020279:118007-118026 None:intergenic 30.0%
ATTCTTCGGTTGATTAACAA+CGG - tig0020279:118076-118095 None:intergenic 30.0%
GACTGAGAATAGTAATTCTT+CGG - tig0020279:118090-118109 None:intergenic 30.0%
!! TCAGTGATTTTAATGAGAGT+AGG + tig0020279:118256-118275 Msa1379470:CDS 30.0%
TGCTTTGTATAAACCTCATA+AGG + tig0020279:118350-118369 Msa1379470:CDS 30.0%
CTTATATCATTTGCCTTATG+AGG - tig0020279:118366-118385 None:intergenic 30.0%
TCAAAGTGGGTATATAATGT+AGG - tig0020279:118627-118646 None:intergenic 30.0%
!!! TTAAACTGGTTTTCCAAACA+GGG - tig0020279:118898-118917 None:intergenic 30.0%
!!! ATTAAACTGGTTTTCCAAAC+AGG - tig0020279:118899-118918 None:intergenic 30.0%
GTAATTTATTTAGCCCTGTT+TGG + tig0020279:118966-118985 Msa1379470:intron 30.0%
! AAGAAATTATATCGGCTACT+AGG - tig0020279:119080-119099 None:intergenic 30.0%
GCATCATGAATACTATAAAC+AGG + tig0020279:119142-119161 Msa1379470:intron 30.0%
TATCAAGAAAGCTATAAGAG+AGG - tig0020279:119361-119380 None:intergenic 30.0%
TCAATATACTTAGACCCTAT+AGG - tig0020279:119519-119538 None:intergenic 30.0%
TTCTTATACGAACTCTTGTT+TGG + tig0020279:120042-120061 Msa1379470:CDS 30.0%
! GAATGGATGTTGTTTGATTT+CGG - tig0020279:120235-120254 None:intergenic 30.0%
ATTCTTTCACAATGTGAACT+GGG + tig0020279:120251-120270 Msa1379470:CDS 30.0%
! ACTTCATTTTCAGTTGAGTT+TGG - tig0020279:120333-120352 None:intergenic 30.0%
AACTCAACTGAAAATGAAGT+TGG + tig0020279:120333-120352 Msa1379470:CDS 30.0%
TCTTACAACAGTTCATCAAT+TGG - tig0020279:120499-120518 None:intergenic 30.0%
AAACTTTGTTCCTCAAGTTA+AGG - tig0020279:120534-120553 None:intergenic 30.0%
ATATAGGAAAATGGGAATAG+AGG - tig0020279:120572-120591 None:intergenic 30.0%
GTATCACACTCAATAAACAT+TGG - tig0020279:120723-120742 None:intergenic 30.0%
TTATTGAGTGTGATACTCTT+AGG + tig0020279:120727-120746 Msa1379470:intron 30.0%
TATTGAGTGTGATACTCTTA+GGG + tig0020279:120728-120747 Msa1379470:intron 30.0%
TTGGCAAATAATCTGGTAAT+AGG - tig0020279:120792-120811 None:intergenic 30.0%
CAACAATTTGGCAAATAATC+TGG - tig0020279:120799-120818 None:intergenic 30.0%
CACAACCAATATCAACAATT+TGG - tig0020279:120811-120830 None:intergenic 30.0%
ATAGTTTCAACTGCAGTCAT+AGG - tig0020279:117703-117722 None:intergenic 35.0%
AAGAAACAATGAAAGGTTGC+CGG + tig0020279:117948-117967 Msa1379470:CDS 35.0%
ATATTGAAGAGATTGGGAAG+TGG + tig0020279:118447-118466 Msa1379470:CDS 35.0%
!!! ACAACCTGGGAAGTATTTTT+CGG + tig0020279:118716-118735 Msa1379470:CDS 35.0%
GTAATTTCTTTAGCCCTGTT+TGG + tig0020279:118882-118901 Msa1379470:intron 35.0%
CTAATCTGGTTATCCAAACA+GGG - tig0020279:118982-119001 None:intergenic 35.0%
ACTAATCTGGTTATCCAAAC+AGG - tig0020279:118983-119002 None:intergenic 35.0%
!! CTATAAGTGCTGAACTAATC+TGG - tig0020279:118996-119015 None:intergenic 35.0%
! GATTAGTTCAGCACTTATAG+TGG + tig0020279:118996-119015 Msa1379470:intron 35.0%
TATCTTACGAAAAGCTCAGT+TGG - tig0020279:119033-119052 None:intergenic 35.0%
AGTGAAAAGAAGCAAGAAAC+TGG - tig0020279:119118-119137 None:intergenic 35.0%
CTGTACTTAATCAACAGCTA+CGG + tig0020279:119311-119330 Msa1379470:intron 35.0%
!! CAGATTTTGATCTCTCTCTA+AGG + tig0020279:119689-119708 Msa1379470:CDS 35.0%
!! TTTGTTGACTTCACTAGAGT+TGG - tig0020279:119727-119746 None:intergenic 35.0%
!!! AGCTTTTAGTTTCAGTGATC+GGG - tig0020279:119750-119769 None:intergenic 35.0%
!!! GAGCTTTTAGTTTCAGTGAT+CGG - tig0020279:119751-119770 None:intergenic 35.0%
ATCACTGAAACTAAAAGCTC+CGG + tig0020279:119751-119770 Msa1379470:CDS 35.0%
! CCTTCACCTTTGATAATTTC+AGG - tig0020279:119985-120004 None:intergenic 35.0%
CCTGAAATTATCAAAGGTGA+AGG + tig0020279:119982-120001 Msa1379470:CDS 35.0%
ATTATCAAAGGTGAAGGACA+TGG + tig0020279:119988-120007 Msa1379470:CDS 35.0%
ACCACGATGTTTAATGTTGT+TGG + tig0020279:120096-120115 Msa1379470:CDS 35.0%
CCACGATGTTTAATGTTGTT+GGG + tig0020279:120097-120116 Msa1379470:CDS 35.0%
CAGTTCACATTGTGAAAGAA+TGG - tig0020279:120252-120271 None:intergenic 35.0%
CATTCTTTCACAATGTGAAC+TGG + tig0020279:120250-120269 Msa1379470:CDS 35.0%
! TGAGTTTGGTTTCATCATCA+TGG - tig0020279:120319-120338 None:intergenic 35.0%
AATGCTATGTGTAGAGTTTG+TGG + tig0020279:120406-120425 Msa1379470:intron 35.0%
TTCAATAGAGGAAGGAATCA+TGG - tig0020279:120433-120452 None:intergenic 35.0%
! ATTCCAAATGCCTTAACTTG+AGG + tig0020279:120521-120540 Msa1379470:intron 35.0%
! TCTATAGTCGCTCGAATTTT+GGG + tig0020279:120603-120622 Msa1379470:intron 35.0%
! AGTATTTACTCTTTTGTCGG+AGG + tig0020279:120654-120673 Msa1379470:intron 35.0%
! GTGTAATTTGTGACATCAAG+TGG + tig0020279:120828-120847 Msa1379470:intron 35.0%
TTATGTTGTTCCAGGTTTCT+TGG + tig0020279:120938-120957 Msa1379470:intron 35.0%
TGCAGTTGAAACTATTGCAG+AGG + tig0020279:117708-117727 Msa1379470:CDS 40.0%
GGTTCAGAATTCAGTTTCTG+AGG + tig0020279:117729-117748 Msa1379470:CDS 40.0%
ACAGCCTTCCTATAACATCA+GGG + tig0020279:117764-117783 Msa1379470:CDS 40.0%
GAATCCCTGATGTTATAGGA+AGG - tig0020279:117771-117790 None:intergenic 40.0%
!! TGCTTGCTGCATAATTTTGC+CGG - tig0020279:117970-117989 None:intergenic 40.0%
!! TAGTAACTGTTCTGAGGACT+AGG - tig0020279:118129-118148 None:intergenic 40.0%
GCTGAATAGTAACTGTTCTG+AGG - tig0020279:118135-118154 None:intergenic 40.0%
TTTCGCTTCTGAATAGACAG+TGG - tig0020279:118157-118176 None:intergenic 40.0%
AGGAAAACCAGTATCTGTAG+AGG + tig0020279:118276-118295 Msa1379470:CDS 40.0%
GGAAAACCAGTATCTGTAGA+GGG + tig0020279:118277-118296 Msa1379470:CDS 40.0%
TTCATCGCTAACATCACTTC+CGG - tig0020279:118307-118326 None:intergenic 40.0%
AGATTGGGAAGTGGAGATAT+AGG + tig0020279:118456-118475 Msa1379470:CDS 40.0%
GTATATCTGGCTGAACTTAG+TGG + tig0020279:118483-118502 Msa1379470:CDS 40.0%
AACTCGTAAGAAGCTACTGA+GGG + tig0020279:118554-118573 Msa1379470:CDS 40.0%
!!! TTGGTAATGGAGTTTTGTCC+TGG + tig0020279:118666-118685 Msa1379470:CDS 40.0%
GGGAGAAAGCTGAAAAAGAA+AGG - tig0020279:118765-118784 None:intergenic 40.0%
GGCTACTAGGTATAAATCTC+AGG - tig0020279:119067-119086 None:intergenic 40.0%
!!! TTTCGTTTTCGGGTTTTTGC+AGG + tig0020279:119551-119570 Msa1379470:intron 40.0%
!! CCAACACATTTTCAGGCTTA+AGG - tig0020279:119642-119661 None:intergenic 40.0%
CCTTAAGCCTGAAAATGTGT+TGG + tig0020279:119639-119658 Msa1379470:CDS 40.0%
! TCTCTCACCAACACATTTTC+AGG - tig0020279:119649-119668 None:intergenic 40.0%
! AATGTGTTGGTGAGAGAAGA+CGG + tig0020279:119652-119671 Msa1379470:CDS 40.0%
TTGGCGCCTGAAATTATCAA+AGG + tig0020279:119976-119995 Msa1379470:CDS 40.0%
CAGAACCTTTGAATGGTGTT+CGG - tig0020279:120068-120087 None:intergenic 40.0%
GAACACCATTCAAAGGTTCT+GGG + tig0020279:120067-120086 Msa1379470:CDS 40.0%
CCCAACAACATTAAACATCG+TGG - tig0020279:120100-120119 None:intergenic 40.0%
! GGAGATTCTGGAAACCTTAA+AGG - tig0020279:120126-120145 None:intergenic 40.0%
TTCATCATCATGGTCTGTCT+TGG - tig0020279:120309-120328 None:intergenic 40.0%
! GTTCCTCAAGTTAAGGCATT+TGG - tig0020279:120527-120546 None:intergenic 40.0%
! CTCTATAGTCGCTCGAATTT+TGG + tig0020279:120602-120621 Msa1379470:intron 40.0%
! CTATAGTCGCTCGAATTTTG+GGG + tig0020279:120604-120623 Msa1379470:intron 40.0%
! GAGGTCTAGAGCATTCATAA+TGG + tig0020279:120673-120692 Msa1379470:intron 40.0%
!! TAATGGACTAACTCTCTCCA+AGG + tig0020279:120690-120709 Msa1379470:intron 40.0%
!! AATGGACTAACTCTCTCCAA+GGG + tig0020279:120691-120710 Msa1379470:intron 40.0%
TAAACATTGGCATCAACCCT+TGG - tig0020279:120710-120729 None:intergenic 40.0%
TAGGGTTGTCAACATGATCT+AGG + tig0020279:120746-120765 Msa1379470:intron 40.0%
ATCTGGTAATAGGTACTCGA+CGG - tig0020279:120782-120801 None:intergenic 40.0%
TGACATCAAGTGGATACATG+TGG + tig0020279:120838-120857 Msa1379470:intron 40.0%
TTTCTTGGCTGACTGTCTTA+GGG + tig0020279:120953-120972 Msa1379470:CDS 40.0%
CTGATGTTATAGGAAGGCTG+TGG - tig0020279:117765-117784 None:intergenic 45.0%
CACAGCCTTCCTATAACATC+AGG + tig0020279:117763-117782 Msa1379470:CDS 45.0%
TTAACAACGGCTCGTTTCGA+TGG - tig0020279:118063-118082 None:intergenic 45.0%
!! ACACTCACTGACTTCAGTAC+TGG - tig0020279:118190-118209 None:intergenic 45.0%
!! AGTGAGTGTGTGAGTGTTGA+TGG + tig0020279:118201-118220 Msa1379470:CDS 45.0%
! AGTATCTGTAGAGGGAGTAC+CGG + tig0020279:118285-118304 Msa1379470:CDS 45.0%
AGCAACACGAGTAGTTTGAG+CGG + tig0020279:118327-118346 Msa1379470:CDS 45.0%
CTTCTTACGAGTTGCAAGCT+CGG - tig0020279:118547-118566 None:intergenic 45.0%
CAACTCGTAAGAAGCTACTG+AGG + tig0020279:118553-118572 Msa1379470:CDS 45.0%
GAGTGTCTCAGTCTCAAAGT+GGG - tig0020279:118640-118659 None:intergenic 45.0%
! AGAGTGTCTCAGTCTCAAAG+TGG - tig0020279:118641-118660 None:intergenic 45.0%
GACACTCTCTTGCTTGGTAA+TGG + tig0020279:118653-118672 Msa1379470:CDS 45.0%
!! GTAATGGAGTTTTGTCCTGG+TGG + tig0020279:118669-118688 Msa1379470:CDS 45.0%
GTCTTTGCCTGATTGCATGA+AGG - tig0020279:118698-118717 None:intergenic 45.0%
CAATCAGGCAAAGACAACCT+GGG + tig0020279:118703-118722 Msa1379470:CDS 45.0%
TGCTCCGAAAAATACTTCCC+AGG - tig0020279:118723-118742 None:intergenic 45.0%
!! ATTTTTCGGAGCATGCTGTC+AGG + tig0020279:118730-118749 Msa1379470:CDS 45.0%
TGCAGAAGTTCTGCTTGCTT+TGG + tig0020279:119582-119601 Msa1379470:CDS 45.0%
! TTGGAGTACTTGCACATGCT+TGG + tig0020279:119601-119620 Msa1379470:CDS 45.0%
CTTCACTAGAGTTGGACTGA+CGG - tig0020279:119719-119738 None:intergenic 45.0%
! AACATGCATGCTTTTCGCCA+CGG + tig0020279:119818-119837 Msa1379470:CDS 45.0%
! TTTTCGCCACGGTTTCTATC+CGG + tig0020279:119829-119848 Msa1379470:CDS 45.0%
! GATTTTCCGGATAGAAACCG+TGG - tig0020279:119838-119857 None:intergenic 45.0%
TTTGGCCGAACACCATTCAA+AGG + tig0020279:120060-120079 Msa1379470:CDS 45.0%
CGAACACCATTCAAAGGTTC+TGG + tig0020279:120066-120085 Msa1379470:CDS 45.0%
CGATTCCCAGAACCTTTGAA+TGG - tig0020279:120075-120094 None:intergenic 45.0%
ATGTTGTTGGGCAGCCTTTA+AGG + tig0020279:120109-120128 Msa1379470:CDS 45.0%
AAGCTGACAGTAGGAGATTC+TGG - tig0020279:120138-120157 None:intergenic 45.0%
TACTGTCAGCTTTGCTGCAA+GGG + tig0020279:120146-120165 Msa1379470:CDS 45.0%
TCTATAGGCAAGACGGTGTT+GGG - tig0020279:120202-120221 None:intergenic 45.0%
GAAGTTGGAATGAACCCTTC+TGG + tig0020279:120348-120367 Msa1379470:CDS 45.0%
GGTTGTCAACATGATCTAGG+TGG + tig0020279:120749-120768 Msa1379470:intron 45.0%
TCTGGTAATAGGTACTCGAC+GGG - tig0020279:120781-120800 None:intergenic 45.0%
GTTTCTTGGCTGACTGTCTT+AGG + tig0020279:120952-120971 Msa1379470:CDS 45.0%
TTCTTGGCTGACTGTCTTAG+GGG + tig0020279:120954-120973 Msa1379470:CDS 45.0%
!!! CTGTCTTAGGGGCGATTTTT+TGG + tig0020279:120965-120984 Msa1379470:CDS 45.0%
ATAGGAAGGCTGTGGCGTAT+CGG - tig0020279:117757-117776 None:intergenic 50.0%
CGGGGAATCCCTGATGTTAT+AGG - tig0020279:117775-117794 None:intergenic 50.0%
GATGGTAAGTCGTGTGAGAG+CGG + tig0020279:118219-118238 Msa1379470:CDS 50.0%
GGTACTCCCTCTACAGATAC+TGG - tig0020279:118286-118305 None:intergenic 50.0%
TGGCTGAACTTAGTGGCACA+AGG + tig0020279:118490-118509 Msa1379470:CDS 50.0%
GACTGAGACACTCTCTTGCT+TGG + tig0020279:118647-118666 Msa1379470:CDS 50.0%
GCAATCAGGCAAAGACAACC+TGG + tig0020279:118702-118721 Msa1379470:CDS 50.0%
! TGCTGGCTGAATGCAGTATC+CGG - tig0020279:119773-119792 None:intergenic 50.0%
CATGCATGTTGGATGCAGTC+TGG - tig0020279:119808-119827 None:intergenic 50.0%
! GTGGCGAAAAGCATGCATGT+TGG - tig0020279:119819-119838 None:intergenic 50.0%
GTACTCGTGTGTGCCTACAA+AGG - tig0020279:119956-119975 None:intergenic 50.0%
TGTAGGCACACACGAGTACT+TGG + tig0020279:119957-119976 Msa1379470:CDS 50.0%
!! TGAAGGACATGGAAGTGCTG+TGG + tig0020279:119999-120018 Msa1379470:CDS 50.0%
!! GACATGGAAGTGCTGTGGAT+TGG + tig0020279:120004-120023 Msa1379470:CDS 50.0%
!! ATGGAAGTGCTGTGGATTGG+TGG + tig0020279:120007-120026 Msa1379470:CDS 50.0%
CTTGCAGCAAAGCTGACAGT+AGG - tig0020279:120147-120166 None:intergenic 50.0%
CTACTGTCAGCTTTGCTGCA+AGG + tig0020279:120145-120164 Msa1379470:CDS 50.0%
! CTATAGGCAAGACGGTGTTG+GGG - tig0020279:120201-120220 None:intergenic 50.0%
GTCTATAGGCAAGACGGTGT+TGG - tig0020279:120203-120222 None:intergenic 50.0%
ATGGTCTGTCTTGGTACCTC+TGG - tig0020279:120300-120319 None:intergenic 50.0%
TGGTAATAGGTACTCGACGG+GGG - tig0020279:120779-120798 None:intergenic 50.0%
CTGGTAATAGGTACTCGACG+GGG - tig0020279:120780-120799 None:intergenic 50.0%
AGACAGTCAGCCAAGAAACC+TGG - tig0020279:120951-120970 None:intergenic 50.0%
ATAAGGGAGGCCGCGAAGAA+CGG - tig0020279:117795-117814 None:intergenic 55.0%
TCGCGAGGGGATGTTGGAAA+TGG + tig0020279:118413-118432 Msa1379470:CDS 55.0%
CGCGAGGGGATGTTGGAAAT+GGG + tig0020279:118414-118433 Msa1379470:CDS 55.0%
GCGAGGGGATGTTGGAAATG+GGG + tig0020279:118415-118434 Msa1379470:CDS 55.0%
GAAGCTACTGAGGGCTCAGA+CGG + tig0020279:118563-118582 Msa1379470:CDS 55.0%
ATTGCATGAAGGTCGCCACC+AGG - tig0020279:118687-118706 None:intergenic 55.0%
GTGGCGACCTTCATGCAATC+AGG + tig0020279:118688-118707 Msa1379470:CDS 55.0%
TCTGGCTGCATTGCACATGC+TGG - tig0020279:119790-119809 None:intergenic 55.0%
!! GCTCAGGGAGAGGTGTCATT+TGG - tig0020279:119900-119919 None:intergenic 55.0%
!! TTGGCTCTGCGACTAGCTCA+GGG - tig0020279:119915-119934 None:intergenic 55.0%
GACATTGACCGCGCACTTGT+TGG - tig0020279:119934-119953 None:intergenic 55.0%
GCGCGGTCAATGTCCTTTGT+AGG + tig0020279:119940-119959 Msa1379470:CDS 55.0%
!! GCTGTGGATTGGTGGACGTT+CGG + tig0020279:120015-120034 Msa1379470:CDS 55.0%
!! CTGTGGATTGGTGGACGTTC+GGG + tig0020279:120016-120035 Msa1379470:CDS 55.0%
GCTGCAAGGGACTTGATCAG+AGG + tig0020279:120159-120178 Msa1379470:CDS 55.0%
CACCGTCTTGCCTATAGACG+CGG + tig0020279:120204-120223 Msa1379470:CDS 55.0%
CTCCGCGTCTATAGGCAAGA+CGG - tig0020279:120209-120228 None:intergenic 55.0%
TTCGGTAGCTCCGCGTCTAT+AGG - tig0020279:120217-120236 None:intergenic 55.0%
GTCTGTCTTGGTACCTCTGG+CGG - tig0020279:120297-120316 None:intergenic 55.0%
CAGGGATTCCCCGTTCTTCG+CGG + tig0020279:117782-117801 Msa1379470:CDS 60.0%
TAAGGGAGGCCGCGAAGAAC+GGG - tig0020279:117794-117813 None:intergenic 60.0%
! TCTGCGACTAGCTCAGGGAG+AGG - tig0020279:119910-119929 None:intergenic 60.0%
!! GTTGGCTCTGCGACTAGCTC+AGG - tig0020279:119916-119935 None:intergenic 60.0%
TCGCAGAGCCAACAAGTGCG+CGG + tig0020279:119923-119942 Msa1379470:CDS 60.0%
AAGGGAGGCCGCGAAGAACG+GGG - tig0020279:117793-117812 None:intergenic 65.0%
TCAAGCTGTCCGAGCTCGCG+AGG + tig0020279:118398-118417 Msa1379470:CDS 65.0%
CAAGCTGTCCGAGCTCGCGA+GGG + tig0020279:118399-118418 Msa1379470:CDS 65.0%
AAGCTGTCCGAGCTCGCGAG+GGG + tig0020279:118400-118419 Msa1379470:CDS 65.0%
CCAACATCCCCTCGCGAGCT+CGG - tig0020279:118410-118429 None:intergenic 65.0%
!! CCTCTGGCGGATTAGCGCAG+CGG - tig0020279:120284-120303 None:intergenic 65.0%
CCGAGCTCGCGAGGGGATGT+TGG + tig0020279:118407-118426 Msa1379470:CDS 70.0%
CCGCTGCGCTAATCCGCCAG+AGG + tig0020279:120281-120300 Msa1379470:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0020279 gene 117691 121013 117691 ID=Msa1379470;Name=Msa1379470
tig0020279 mRNA 117691 121013 117691 ID=Msa1379470-mRNA-1;Parent=Msa1379470;Name=Msa1379470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.66|1|1|3|0|639
tig0020279 exon 117691 118751 117691 ID=Msa1379470-mRNA-1:exon:6558;Parent=Msa1379470-mRNA-1
tig0020279 exon 119573 120369 119573 ID=Msa1379470-mRNA-1:exon:6559;Parent=Msa1379470-mRNA-1
tig0020279 exon 120952 121013 120952 ID=Msa1379470-mRNA-1:exon:6560;Parent=Msa1379470-mRNA-1
tig0020279 CDS 117691 118751 117691 ID=Msa1379470-mRNA-1:cds;Parent=Msa1379470-mRNA-1
tig0020279 CDS 119573 120369 119573 ID=Msa1379470-mRNA-1:cds;Parent=Msa1379470-mRNA-1
tig0020279 CDS 120952 121013 120952 ID=Msa1379470-mRNA-1:cds;Parent=Msa1379470-mRNA-1
Gene Sequence

>Msa1379470

ATGGAGTCTCCTATGACTGCAGTTGAAACTATTGCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCTTCCAGATCTTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGTTGCCGGCAAAATTATGCAGCAAGCAAATGTTTGATGATTCCGAGATTTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATAGTATCTTAGTTCCATCGAAACGAGCCGTTGTTAATCAACCGAAGAATTACTATTCTCAGTCAGAGACTAGTTTTTGTCCTAGTCCTCAGAACAGTTACTATTCAGCCACTGTCTATTCAGAAGCGAAACAAAGTTTCACCAGTACTGAAGTCAGTGAGTGTGTGAGTGTTGATGGTAAGTCGTGTGAGAGCGGAGAAGTTCCGAATTTCAGTGATTTTAATGAGAGTAGGAAAACCAGTATCTGTAGAGGGAGTACCGGAAGTGATGTTAGCGATGAAAGCAACACGAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGCGAGGGGATGTTGGAAATGGGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTGGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCGAGCTTGCAACTCGTAAGAAGCTACTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACCCACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCTGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCGGAGCATGCTGTCAGGTTTTATGTTGCAGAAGTTCTGCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAGCCTGAAAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAGTGAAGTCAACAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCATGTGCAATGCAGCCAGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTCGCAGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATCAAAGGTGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGCCGAACACCATTCAAAGGTTCTGGGAATCGAACCACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGCTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCATTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCTAATCCGCCAGAGGTACCAAGACAGACCATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGTTTCTTGGCTGACTGTCTTAGGGGCGATTTTTTGGATGTTGTTTTTCCTAAGTTGTCTTAG
Protein sequence

>Msa1379470

MESPMTAVETIAEVQNSVSEVPIRHSLPITSGIPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERLPAKLCSKQMFDDSEIFDSSSEVLESDNSILVPSKRAVVNQPKNYYSQSETSFCPSPQNSYYSATVYSEAKQSFTSTEVSECVSVDGKSCESGEVPNFSDFNESRKTSICRGSTGSDVSDESNTSSLSGALYKPHKANDIRWEAIQAVRAREGMLEMGHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSTNPITETKSSGYCIQPACAMQPDCIQHACFSPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMKPNSTENEVGMNPSGFLADCLRGDFLDVVFPKLS*