AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0935090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0935090 MtrunA17_Chr6g0450701 81.498 227 11 1 62 257 151 377 8.73e-129 378
Msa0935090 MtrunA17_Chr6g0450701 74.096 166 21 1 267 410 31 196 4.96e-73 235
Msa0935090 MtrunA17_Chr6g0450701 86.154 65 9 0 1 65 1 65 1.05e-28 116
Msa0935090 MtrunA17_Chr6g0450701 60.976 82 32 0 395 476 297 378 2.67e-23 101
Msa0935090 MtrunA17_Chr8g0352901 64.655 232 46 3 62 257 140 371 3.97e-98 300
Msa0935090 MtrunA17_Chr8g0352901 65.868 167 33 2 268 410 21 187 3.46e-62 207
Msa0935090 MtrunA17_Chr8g0352901 49.398 83 41 1 395 476 290 372 4.19e-15 76.6
Msa0935090 MtrunA17_Chr8g0352901 60.000 65 15 1 1 65 1 54 1.99e-12 68.6
Msa0935090 MtrunA17_Chr6g0450711 63.436 227 52 1 62 257 234 460 7.91e-94 291
Msa0935090 MtrunA17_Chr6g0450711 82.759 174 8 1 259 410 106 279 2.41e-88 278
Msa0935090 MtrunA17_Chr6g0450711 70.833 96 26 1 382 477 369 462 4.08e-35 136
Msa0935090 MtrunA17_Chr6g0450711 79.104 67 12 1 1 65 82 148 1.69e-23 102
Msa0935090 MtrunA17_Chr6g0450721 78.916 166 13 1 267 410 25 190 6.60e-82 258
Msa0935090 MtrunA17_Chr6g0450721 55.066 227 58 4 62 257 145 358 5.82e-71 229
Msa0935090 MtrunA17_Chr6g0450721 83.019 53 9 0 425 477 308 360 1.55e-21 95.9
Msa0935090 MtrunA17_Chr6g0450721 72.308 65 12 1 1 65 1 59 1.58e-21 95.9
Msa0935090 MtrunA17_Chr6g0450731 54.661 236 67 3 54 257 133 360 8.12e-80 252
Msa0935090 MtrunA17_Chr6g0450731 69.880 166 24 3 267 410 25 186 4.76e-65 214
Msa0935090 MtrunA17_Chr6g0450731 56.701 97 31 3 382 477 276 362 5.96e-22 97.1
Msa0935090 MtrunA17_Chr6g0450731 69.231 65 14 1 1 65 1 59 2.36e-19 89.4
Msa0935090 MtrunA17_Chr8g0339251 60.656 183 36 3 77 223 141 323 2.64e-65 213
Msa0935090 MtrunA17_Chr8g0339251 58.084 167 32 3 268 410 21 173 2.83e-49 171
Msa0935090 MtrunA17_Chr8g0339251 60.000 65 15 1 1 65 1 54 6.03e-13 69.7
Msa0935090 MtrunA17_Chr7g0226931 46.522 230 78 5 70 257 171 397 2.48e-61 205
Msa0935090 MtrunA17_Chr7g0226931 35.961 203 91 4 259 424 22 222 1.55e-29 119
Msa0935090 MtrunA17_Chr7g0226931 50.000 64 31 1 414 476 335 398 5.53e-15 76.6
Msa0935090 MtrunA17_Chr7g0226911 47.085 223 79 5 74 257 161 383 2.72e-61 205
Msa0935090 MtrunA17_Chr7g0226911 34.872 195 95 3 258 424 18 208 1.08e-25 108
Msa0935090 MtrunA17_Chr7g0226911 48.438 64 32 1 414 476 321 384 2.31e-14 74.7
Msa0935090 MtrunA17_Chr7g0226941 45.946 222 84 5 71 257 157 377 7.84e-58 196
Msa0935090 MtrunA17_Chr7g0226941 48.000 175 58 4 266 411 24 194 1.20e-38 144
Msa0935090 MtrunA17_Chr7g0254461 44.248 226 88 3 70 257 165 390 4.79e-56 191
Msa0935090 MtrunA17_Chr7g0254461 43.956 182 65 4 263 413 31 206 6.19e-32 126
Msa0935090 MtrunA17_Chr8g0381581 42.667 225 91 3 70 256 161 385 2.40e-52 181
Msa0935090 MtrunA17_Chr8g0381581 42.442 172 63 4 271 412 36 201 5.40e-30 120
Msa0935090 MtrunA17_Chr1g0159971 41.778 225 92 5 70 257 168 390 1.82e-50 176
Msa0935090 MtrunA17_Chr1g0159971 41.799 189 74 4 266 424 38 220 1.07e-30 122
Msa0935090 MtrunA17_Chr1g0160101 41.333 225 93 5 70 257 164 386 3.15e-49 173
Msa0935090 MtrunA17_Chr1g0160101 41.463 164 56 4 270 401 37 192 3.11e-25 107
Msa0935090 MtrunA17_Chr1g0159981 41.410 227 90 5 70 257 167 389 2.19e-46 166
Msa0935090 MtrunA17_Chr1g0159981 40.764 157 58 3 274 401 45 195 7.17e-23 100
Msa0935090 MtrunA17_Chr1g0159981 38.043 92 44 3 394 476 303 390 4.54e-11 64.7
Msa0935090 MtrunA17_Chr1g0159991 40.708 226 93 5 70 257 157 379 1.08e-45 163
Msa0935090 MtrunA17_Chr1g0159991 41.104 163 61 4 268 401 29 185 4.27e-24 103
Msa0935090 MtrunA17_Chr1g0159991 45.161 62 33 1 416 476 319 380 3.00e-11 65.1
Msa0935090 MtrunA17_Chr1g0160031 39.013 223 99 4 70 257 160 380 5.63e-43 156
Msa0935090 MtrunA17_Chr1g0160031 41.718 163 60 4 268 401 32 188 3.03e-23 101
Msa0935090 MtrunA17_Chr1g0160031 42.623 61 34 1 417 476 321 381 7.55e-11 63.9
Msa0935090 MtrunA17_Chr1g0160011 39.381 226 100 4 70 260 161 384 8.00e-43 155
Msa0935090 MtrunA17_Chr1g0160011 40.230 174 68 5 268 411 33 200 3.49e-22 98.2
Msa0935090 MtrunA17_Chr1g0160011 38.372 86 50 2 394 476 297 382 3.59e-11 64.7
Msa0935090 MtrunA17_Chr7g0273101 37.004 227 106 3 64 253 143 369 2.08e-40 149
Msa0935090 MtrunA17_Chr7g0273101 40.244 164 66 5 273 409 27 185 3.78e-23 100
Msa0935090 MtrunA17_Chr1g0191461 35.135 222 106 4 70 253 149 370 3.39e-36 137
Msa0935090 MtrunA17_Chr1g0191461 40.805 174 67 8 266 411 22 187 7.72e-23 99.8
Msa0935090 MtrunA17_Chr7g0271551 34.259 216 96 4 77 255 155 361 2.57e-33 129
Msa0935090 MtrunA17_Chr7g0271551 35.762 151 63 5 275 401 36 176 2.38e-11 65.1
Msa0935090 MtrunA17_Chr8g0347751 32.877 219 112 3 71 256 164 380 1.29e-31 125
Msa0935090 MtrunA17_Chr8g0347751 35.404 161 75 2 266 397 27 187 1.64e-17 84.3
Msa0935090 MtrunA17_Chr7g0275291 32.273 220 108 5 71 251 151 368 8.48e-29 117
Msa0935090 MtrunA17_Chr7g0275291 32.558 172 77 3 270 412 28 189 7.35e-16 79.3
Msa0935090 MtrunA17_Chr2g0283541 29.151 271 130 8 37 252 29 292 1.78e-23 100
Msa0935090 MtrunA17_Chr2g0294311 34.524 168 94 4 96 260 219 373 3.28e-22 98.2
Msa0935090 MtrunA17_Chr3g0104831 36.842 152 84 4 108 252 153 299 6.36e-21 93.2
Msa0935090 MtrunA17_Chr3g0104821 36.842 152 84 4 108 252 234 380 1.25e-20 93.6
Msa0935090 MtrunA17_Chr8g0374101 36.601 153 82 3 96 246 222 361 1.42e-19 90.5
Msa0935090 MtrunA17_Chr4g0068441 33.333 168 96 4 96 260 214 368 6.48e-19 88.2
Msa0935090 MtrunA17_Chr2g0283531 33.333 165 97 4 94 252 209 366 2.99e-18 86.3
Msa0935090 MtrunA17_Chr4g0057991 30.723 166 101 5 91 251 212 368 3.33e-18 86.3
Msa0935090 MtrunA17_Chr2g0294301 35.256 156 90 2 94 249 212 356 4.58e-18 85.9
Msa0935090 MtrunA17_Chr2g0283481 33.537 164 97 4 94 253 228 383 9.61e-18 85.1
Msa0935090 MtrunA17_Chr2g0283511 30.769 182 112 6 78 253 196 369 2.66e-17 83.6
Msa0935090 MtrunA17_Chr2g0283501 29.651 172 107 5 96 261 212 375 4.65e-17 82.8
Msa0935090 MtrunA17_Chr2g0317261 35.374 147 76 5 108 250 218 349 5.44e-17 82.4
Msa0935090 MtrunA17_Chr3g0093031 34.559 136 81 2 121 252 232 363 7.31e-17 82.0
Msa0935090 MtrunA17_Chr2g0317271 33.562 146 80 4 108 250 218 349 8.01e-17 82.0
Msa0935090 MtrunA17_Chr0c01g0489581 33.562 146 80 4 108 250 218 349 9.11e-17 81.6
Msa0935090 MtrunA17_Chr3g0112691 32.667 150 92 3 108 252 216 361 1.04e-16 81.6
Msa0935090 MtrunA17_Chr3g0112821 35.606 132 80 2 121 252 232 358 1.68e-16 80.9
Msa0935090 MtrunA17_Chr0c01g0489571 33.562 146 80 4 108 250 218 349 3.42e-16 80.1
Msa0935090 MtrunA17_Chr3g0096551 31.056 161 91 3 108 252 218 374 4.24e-15 77.0
Msa0935090 MtrunA17_Chr8g0341001 29.333 150 92 4 96 243 210 347 1.17e-14 75.5
Msa0935090 MtrunA17_Chr2g0301581 33.333 150 78 4 108 252 221 353 3.09e-14 73.9
Msa0935090 MtrunA17_Chr2g0301551 33.333 150 78 4 108 252 177 309 4.37e-14 73.2
Msa0935090 MtrunA17_Chr2g0330781 28.205 156 96 5 96 248 209 351 6.30e-14 73.2
Msa0935090 MtrunA17_Chr4g0027521 29.032 155 98 3 91 243 200 344 8.78e-14 72.8
Msa0935090 MtrunA17_Chr2g0301541 32.667 150 79 4 108 252 221 353 1.14e-13 72.4
Msa0935090 MtrunA17_Chr2g0301571 32.667 150 79 4 108 252 177 309 3.27e-13 70.5
Msa0935090 MtrunA17_Chr4g0027571 28.387 155 96 3 91 243 73 214 6.17e-13 68.2
Msa0935090 MtrunA17_Chr7g0229581 27.922 154 96 3 92 243 7 147 8.85e-13 66.2
Msa0935090 MtrunA17_Chr2g0283191 29.936 157 95 4 91 241 214 361 1.11e-12 69.3
Msa0935090 MtrunA17_Chr3g0131321 29.487 156 94 4 96 251 216 355 1.52e-12 68.9
Msa0935090 MtrunA17_Chr5g0434621 27.922 154 92 4 96 247 205 341 1.95e-12 68.6
Msa0935090 MtrunA17_Chr6g0459921 28.495 186 111 5 69 254 192 355 2.89e-12 68.2
Msa0935090 MtrunA17_Chr5g0405821 28.743 167 108 3 83 249 210 365 6.20e-12 67.0
Msa0935090 MtrunA17_Chr6g0455661 27.684 177 108 4 78 254 310 466 6.25e-12 67.4
Msa0935090 MtrunA17_Chr8g0349341 26.396 197 106 5 80 245 161 349 7.96e-12 66.6
Msa0935090 MtrunA17_Chr5g0405831 29.586 169 100 4 85 249 211 364 1.07e-11 66.2
Msa0935090 MtrunA17_Chr8g0371481 29.730 148 93 4 96 243 220 356 1.31e-11 65.9
Msa0935090 MtrunA17_Chr3g0092131 29.530 149 91 5 95 243 203 337 1.73e-11 65.9
Msa0935090 MtrunA17_Chr8g0344941 26.697 221 144 6 31 242 144 355 3.25e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0935090 AT5G14450.1 44.796 221 88 4 71 257 165 385 1.19e-57 196
Msa0935090 AT5G14450.1 45.882 170 59 3 271 411 37 202 7.69e-38 142
Msa0935090 AT3G27950.1 43.363 226 94 3 64 257 146 369 4.15e-53 183
Msa0935090 AT3G27950.1 54.167 168 51 4 268 411 25 190 3.42e-46 165
Msa0935090 AT3G26430.1 41.150 226 95 3 70 257 152 377 7.66e-50 175
Msa0935090 AT3G26430.1 40.571 175 68 4 268 412 24 192 5.12e-29 118
Msa0935090 AT1G67830.1 40.444 225 93 6 59 245 143 364 8.01e-45 161
Msa0935090 AT1G67830.1 40.909 176 68 4 266 411 21 190 2.68e-28 115
Msa0935090 AT1G54790.1 37.327 217 99 3 74 253 155 371 2.51e-39 146
Msa0935090 AT1G54790.1 38.012 171 74 5 266 409 22 187 1.01e-20 94.4
Msa0935090 AT1G54790.3 37.327 217 99 3 74 253 156 372 5.83e-39 145
Msa0935090 AT1G54790.3 39.634 164 67 5 273 409 30 188 2.51e-21 95.9
Msa0935090 AT3G05180.1 36.239 218 102 3 74 254 160 377 8.87e-37 139
Msa0935090 AT3G05180.1 36.364 165 71 5 273 409 34 192 2.14e-17 84.3
Msa0935090 AT1G54790.2 33.333 243 99 4 74 253 155 397 4.30e-34 132
Msa0935090 AT1G54790.2 38.012 171 74 5 266 409 22 187 1.35e-20 94.4
Msa0935090 AT1G56670.1 36.150 213 90 4 77 252 162 365 2.78e-33 130
Msa0935090 AT1G56670.1 36.025 161 71 7 266 401 30 183 2.64e-12 68.6
Msa0935090 AT3G62280.1 33.790 219 110 2 71 256 147 363 8.39e-33 128
Msa0935090 AT3G62280.1 38.667 150 52 5 274 397 35 170 2.27e-15 77.8
Msa0935090 AT1G09390.1 35.321 218 99 5 69 251 151 361 7.64e-32 125
Msa0935090 AT1G09390.1 37.662 154 65 5 272 401 34 180 7.03e-15 76.6
Msa0935090 AT4G01130.3 32.719 217 105 5 74 251 73 287 3.09e-26 108
Msa0935090 AT4G01130.1 32.719 217 105 5 74 251 159 373 1.41e-25 108
Msa0935090 AT4G01130.1 34.463 177 81 3 265 412 24 194 3.32e-18 86.7
Msa0935090 AT2G23540.1 37.805 164 86 4 96 256 233 383 7.78e-24 103
Msa0935090 AT1G28580.2 29.508 183 115 5 94 269 134 309 1.64e-19 89.4
Msa0935090 AT1G28580.1 29.508 183 115 5 94 269 215 390 3.60e-19 89.7
Msa0935090 AT2G27360.1 30.319 188 124 5 83 266 200 384 4.97e-19 89.4
Msa0935090 AT1G28600.1 30.435 161 106 4 94 251 208 365 6.56e-19 89.0
Msa0935090 AT4G01130.2 34.463 177 81 3 265 412 24 194 1.84e-18 86.7
Msa0935090 AT3G50400.1 34.211 152 88 3 96 246 219 359 7.80e-18 85.5
Msa0935090 AT3G62280.2 32.215 149 68 1 71 186 147 295 2.35e-17 82.8
Msa0935090 AT3G62280.2 38.667 150 52 5 274 397 35 170 1.45e-15 77.8
Msa0935090 AT1G28570.3 28.652 178 120 5 94 268 49 222 2.85e-17 81.3
Msa0935090 AT1G28570.2 24.528 318 176 10 6 268 5 313 2.96e-17 83.2
Msa0935090 AT1G28650.1 30.818 159 105 3 94 250 216 371 4.55e-17 83.2
Msa0935090 AT1G28590.1 31.056 161 105 4 94 251 214 371 5.08e-17 83.2
Msa0935090 AT5G45910.1 30.814 172 104 4 87 250 205 369 6.31e-17 82.8
Msa0935090 AT1G28610.2 30.380 158 104 4 96 250 210 364 9.50e-17 82.4
Msa0935090 AT1G23500.1 29.353 201 89 5 77 245 160 339 1.18e-16 81.6
Msa0935090 AT1G28570.1 28.652 178 120 5 94 268 212 385 1.32e-16 82.0
Msa0935090 AT1G28660.2 31.250 160 104 4 94 250 212 368 2.46e-16 81.3
Msa0935090 AT1G28660.1 31.250 160 104 4 94 250 213 369 2.72e-16 80.9
Msa0935090 AT1G28640.1 29.651 172 113 5 82 250 203 369 4.81e-16 80.1
Msa0935090 AT1G56670.2 33.333 138 58 2 77 182 162 297 8.05e-16 78.6
Msa0935090 AT1G56670.2 35.583 163 73 7 266 403 30 185 1.16e-12 68.9
Msa0935090 AT5G03980.1 34.328 134 83 4 108 240 179 308 1.79e-15 77.8
Msa0935090 AT1G31550.2 28.049 164 106 5 94 251 213 370 2.46e-15 78.2
Msa0935090 AT1G28670.1 29.375 160 107 4 94 250 214 370 3.91e-15 77.4
Msa0935090 AT3G16370.1 30.323 155 96 5 95 248 207 350 8.36e-15 76.3
Msa0935090 AT1G75920.3 28.837 215 119 8 32 243 121 304 1.11e-14 75.1
Msa0935090 AT1G75910.1 31.361 169 84 6 77 243 197 335 1.68e-14 75.1
Msa0935090 AT1G75920.1 28.704 216 120 8 31 243 161 345 1.75e-14 75.1
Msa0935090 AT1G75920.2 28.704 216 120 8 31 243 151 335 1.77e-14 75.1
Msa0935090 AT1G75920.4 28.704 216 120 8 31 243 123 307 2.81e-14 73.9
Msa0935090 AT1G73610.1 29.560 159 87 3 85 243 203 336 5.16e-14 73.6
Msa0935090 AT5G63170.1 31.655 139 71 3 96 234 207 321 5.69e-14 73.6
Msa0935090 AT1G31550.1 27.439 164 104 6 94 251 213 367 7.31e-14 73.6
Msa0935090 AT3G48460.1 29.771 131 81 3 127 253 248 371 1.50e-13 72.4
Msa0935090 AT1G75930.1 29.268 164 93 4 83 244 194 336 2.72e-13 71.6
Msa0935090 AT1G71250.1 29.814 161 100 4 95 254 219 367 5.02e-13 70.9
Msa0935090 AT5G03820.1 28.571 154 99 4 91 243 206 349 1.94e-12 68.9
Msa0935090 AT5G37690.1 28.000 150 89 3 96 243 207 339 2.00e-12 68.9
Msa0935090 AT5G37690.2 28.000 150 89 3 96 243 199 331 2.18e-12 68.6
Msa0935090 AT1G29660.1 33.103 145 85 3 97 241 211 343 2.38e-12 68.9
Msa0935090 AT5G03810.1 28.758 153 99 3 91 243 203 345 3.17e-12 68.2
Msa0935090 AT5G03820.2 28.571 154 99 4 91 243 234 377 4.10e-12 68.2
Msa0935090 AT4G26790.1 27.273 154 89 5 96 243 207 343 5.39e-12 67.4
Msa0935090 AT4G26790.2 27.273 154 89 5 96 243 207 343 5.39e-12 67.4
Msa0935090 AT4G16233.1 33.058 121 71 2 131 249 6 118 5.78e-12 63.5
Msa0935090 AT2G31550.1 27.624 181 106 5 67 242 49 209 8.21e-12 65.1
Msa0935090 AT1G74460.1 28.859 149 92 4 95 243 203 337 8.66e-12 67.0
Msa0935090 AT2G31540.1 29.070 172 97 5 67 233 190 341 1.35e-11 66.2
Msa0935090 AT5G15720.3 27.586 145 92 4 96 239 179 311 1.66e-11 65.9
Msa0935090 AT1G29670.1 30.345 145 88 3 97 241 211 342 1.75e-11 66.2
Msa0935090 AT5G22810.1 28.750 160 99 5 91 248 210 356 1.81e-11 65.9
Msa0935090 AT5G15720.1 27.586 145 92 4 96 239 210 342 2.69e-11 65.5
Msa0935090 AT3G14225.1 31.579 152 94 4 96 245 218 361 2.86e-11 65.5
Msa0935090 AT3G14225.2 31.579 152 94 4 96 245 214 357 3.13e-11 65.5
Msa0935090 AT1G29670.2 30.345 145 88 3 97 241 279 410 3.58e-11 65.5

Find 109 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCTCAACATATTATT+TGG 0.059638 6_3:+5470519 Msa0935090:CDS
TACCCTGCAATTTACAATTT+TGG 0.119689 6_3:+5465199 Msa0935090:CDS
ATAATAAATGGAACAGTTTA+TGG 0.184638 6_3:+5466834 Msa0935090:CDS
ATAAACTGTTCCATTTATTA+TGG 0.222800 6_3:-5466832 None:intergenic
AAGACCAAGTGTTTCAATTA+AGG 0.225665 6_3:+5466412 Msa0935090:CDS
GCCCTTTACACAATTGATAT+TGG 0.242049 6_3:+5469307 Msa0935090:CDS
ATTGCTAATAAGTTGATATT+TGG 0.245173 6_3:-5466481 None:intergenic
TCCAATATCAATTGTGTAAA+GGG 0.269834 6_3:-5469308 None:intergenic
AATCAATTGGTTTGCCCTTT+GGG 0.274859 6_3:-5470558 None:intergenic
ACAGTATATGCAACATTTAC+AGG 0.299148 6_3:+5468374 Msa0935090:CDS
TGGATAATAGATGTTATTAT+AGG 0.310228 6_3:-5466310 None:intergenic
GGTGACTCAAATTCAGATAC+TGG 0.316811 6_3:+5465220 Msa0935090:CDS
ATGAAGGGGCAAGAGTGTTT+TGG 0.317104 6_3:+5466256 Msa0935090:intron
GCCGTTTACACCATTGATAT+TGG 0.322208 6_3:+5465858 Msa0935090:CDS
GGGTCGAAAGAAATAATAAA+TGG 0.334127 6_3:+5470470 Msa0935090:CDS
ATCCTTCTAAACATATTAGT+TGG 0.342485 6_3:+5466871 Msa0935090:CDS
TCCTTCTCAACATATTATTT+GGG 0.344874 6_3:+5470520 Msa0935090:CDS
GTTGCTAAACAAATTCTCTA+TGG 0.346818 6_3:+5466930 Msa0935090:CDS
TAATCAATTGGTTTGCCCTT+TGG 0.347244 6_3:-5470559 None:intergenic
ACTCAGTTGGATCAAATTAC+AGG 0.349530 6_3:+5468997 Msa0935090:CDS
GGGTTGAAGGCCATAATAAA+TGG 0.352251 6_3:+5466822 Msa0935090:CDS
CATGCCTTCCCAACTGAAAC+TGG 0.353866 6_3:-5466969 None:intergenic
TCACCAAAATTGTAAATTGC+AGG 0.356847 6_3:-5465202 None:intergenic
TATAAACATGCCTTTCCAAT+TGG 0.363564 6_3:-5470623 None:intergenic
TCCAATATCAATGGTGTAAA+CGG 0.365234 6_3:-5465859 None:intergenic
TCCCAACTAATATGTTTAGA+AGG 0.367758 6_3:-5466873 None:intergenic
ACATATGTAAACTTGGCTAA+TGG 0.376295 6_3:-5466444 None:intergenic
TTAGAGAAGTCCTCAGGCCT+TGG 0.380925 6_3:-5469283 None:intergenic
CAACTTTGGTGACTCAAATT+CGG 0.385055 6_3:+5468343 Msa0935090:CDS
TTCAAATATGCACTTAGATA+TGG 0.393985 6_3:-5468975 None:intergenic
AACCCATTGATTTGCAGCTT+GGG 0.396020 6_3:-5466910 None:intergenic
TGAGATTAATTCATATACTT+TGG 0.402697 6_3:+5465101 Msa0935090:CDS
TCACCAAAGTTGTAAATTGC+AGG 0.407889 6_3:-5468332 None:intergenic
CCACATAAATTGTGGGTTGA+AGG 0.419713 6_3:+5466809 Msa0935090:CDS
GTCCAATATCAATTGTGTAA+AGG 0.423177 6_3:-5469309 None:intergenic
CAACCCATTGATTTGCAGCT+TGG 0.424095 6_3:-5466911 None:intergenic
TCCTTCTAAACATATTAGTT+GGG 0.428342 6_3:+5466872 Msa0935090:CDS
CATATCAACATATGTAAACT+TGG 0.428365 6_3:-5466451 None:intergenic
ACAACTGTTGGGTCTCCTAA+TGG 0.428672 6_3:+5465262 Msa0935090:CDS
GGTTATAGTCTATTCCATCT+TGG 0.429662 6_3:+5469065 Msa0935090:CDS
TCTGATCCACTAGTTCCAAT+TGG 0.434561 6_3:+5470608 Msa0935090:CDS
CCCACAGTTTATGCGGTAAC+CGG 0.438889 6_3:-5470450 None:intergenic
ATTCACAATGTCGGTCCAAT+TGG 0.441193 6_3:+5466279 Msa0935090:CDS
TTAGAGAATTCCTCATTCCT+TGG 0.443097 6_3:-5465834 None:intergenic
AAATGTTGCATATACTGTTC+CGG 0.447616 6_3:-5468369 None:intergenic
TTATAGGGCAAGCATCCAAT+TGG 0.449790 6_3:-5466294 None:intergenic
ACTCCCAAGCTGCAAATCAA+TGG 0.453135 6_3:+5466907 Msa0935090:CDS
GCCTTTCCAATTGGAACTAG+TGG 0.455838 6_3:-5470614 None:intergenic
TCCACACAAGAAGGGTAACT+TGG 0.459737 6_3:+5466329 Msa0935090:CDS
AAGGAATGAGGAATTCTCTA+AGG 0.460319 6_3:+5465836 Msa0935090:CDS
GGACAAAATGACCTTGCCTA+TGG 0.463715 6_3:+5469328 Msa0935090:CDS
TATGGTTACCACATAAATTG+TGG 0.465633 6_3:+5466801 Msa0935090:CDS
CTGATCCACCAGTTTCAGTT+GGG 0.466594 6_3:+5466961 Msa0935090:CDS
GGATAATAGATGTTATTATA+GGG 0.467186 6_3:-5466309 None:intergenic
TATCCTGCAATTTACAACTT+TGG 0.470970 6_3:+5468329 Msa0935090:CDS
GGACAAAATGATCTTGCCAT+TGG 0.474460 6_3:+5465879 Msa0935090:CDS
AGTGCATATTTGAACTCAGT+TGG 0.477818 6_3:+5468984 Msa0935090:CDS
CATCTATTATCCACACAAGA+AGG 0.486384 6_3:+5466320 Msa0935090:CDS
GAGTTGATTAAACAGAATCT+TGG 0.487683 6_3:-5469126 None:intergenic
CTCCCAAGCTGCAAATCAAT+GGG 0.493657 6_3:+5466908 Msa0935090:CDS
TCTGATCCACCAGTTTCAGT+TGG 0.497222 6_3:+5466960 Msa0935090:CDS
TCTCAACATATTATTTGGGA+TGG 0.499807 6_3:+5470524 Msa0935090:CDS
TATGCAACATACACAACTGT+TGG 0.501599 6_3:+5465250 Msa0935090:CDS
GGTGACTCAAATTCGGATAC+CGG 0.510671 6_3:+5468350 Msa0935090:CDS
TTCTCCTTAATTGAAACACT+TGG 0.512029 6_3:-5466416 None:intergenic
TGTTGAGAAGGATTTGTACA+TGG 0.513121 6_3:-5470509 None:intergenic
TCTAAACATATTAGTTGGGA+TGG 0.513931 6_3:+5466876 Msa0935090:CDS
ATGCAACATACACAACTGTT+GGG 0.514210 6_3:+5465251 Msa0935090:CDS
ATGGTTACCACATAAATTGT+GGG 0.519053 6_3:+5466802 Msa0935090:CDS
CCTTCAACCCACAATTTATG+TGG 0.526410 6_3:-5466809 None:intergenic
CTTTCAAAAGTGGTCTTCCA+AGG 0.529137 6_3:+5465817 Msa0935090:CDS
TGCGCCGCCTACTGCAAAGT+TGG 0.531948 6_3:-5469027 None:intergenic
GGTGCCAACTTTGCAGTAGG+CGG 0.542884 6_3:+5469023 Msa0935090:CDS
ACAGAACCACCTTTCAAAAG+TGG 0.546177 6_3:+5469256 Msa0935090:CDS
TTCTGTTGCGGCAGTTACAC+CGG 0.546226 6_3:+5470431 Msa0935090:intron
CTTCCACAGCAAAATTCCAA+TGG 0.547609 6_3:-5466774 None:intergenic
CTTTCAAAAGTGGACTTCCA+AGG 0.548731 6_3:+5469266 Msa0935090:CDS
TCCACCAGTTTCAGTTGGGA+AGG 0.556860 6_3:+5466965 Msa0935090:CDS
GAGATACTTGAAGTCCAAGA+TGG 0.559373 6_3:-5469079 None:intergenic
CATGGTGCCAACTTTGCAGT+AGG 0.564240 6_3:+5469020 Msa0935090:CDS
TCCCAAATAATATGTTGAGA+AGG 0.567571 6_3:-5470521 None:intergenic
ACAGAACCACCTTTCAAAAG+TGG 0.572355 6_3:+5465807 Msa0935090:CDS
ATCTATTATCCACACAAGAA+GGG 0.574349 6_3:+5466321 Msa0935090:CDS
TCCAAGTTACCCTTCTTGTG+TGG 0.578492 6_3:-5466330 None:intergenic
GTGAGGTATAACACAACCAT+TGG 0.578658 6_3:-5466355 None:intergenic
AAGTGGTCTTCCAAGGAATG+AGG 0.578682 6_3:+5465824 Msa0935090:CDS
CACCAAAATTGTAAATTGCA+GGG 0.585422 6_3:-5465201 None:intergenic
AGGGCTTTAGAGAAGTCCTC+AGG 0.586840 6_3:-5469289 None:intergenic
ACCGGTTACCGCATAAACTG+TGG 0.597247 6_3:+5470449 Msa0935090:CDS
AAGAAGCTTATACCGTTAGG+AGG 0.599444 6_3:-5468404 None:intergenic
CTTTCGACCCACAGTTTATG+CGG 0.600345 6_3:-5470457 None:intergenic
ATTAGCAATGCAAAGAGCCA+AGG 0.602565 6_3:+5466495 Msa0935090:CDS
TGGCATACACTACTCCCAAA+GGG 0.602848 6_3:+5470544 Msa0935090:CDS
GCCTTCCCAACTGAAACTGG+TGG 0.606421 6_3:-5466966 None:intergenic
TGGAACTAGTGGATCAGAGA+AGG 0.606975 6_3:-5470603 None:intergenic
ATGGCATACACTACTCCCAA+AGG 0.610391 6_3:+5470543 Msa0935090:CDS
CTTCAGAGGAACAAGTTCAA+AGG 0.610515 6_3:+5469362 Msa0935090:CDS
GTTGGATCAAATTACAGGCA+TGG 0.611082 6_3:+5469002 Msa0935090:CDS
TGAAGTGTGTTGAAAACCAT+AGG 0.611956 6_3:-5469344 None:intergenic
ACAGGTGTTCAACCTCCTAA+CGG 0.614930 6_3:+5468392 Msa0935090:CDS
AAGGGTAACTTGGATGCCAA+TGG 0.615161 6_3:+5466339 Msa0935090:CDS
TCCACTAGTTCCAATTGGAA+AGG 0.616018 6_3:+5470613 Msa0935090:CDS
TGAAACTGGTGGATCAGAGA+AGG 0.618066 6_3:-5466955 None:intergenic
TGTGTTGAAAACCATAGGCA+AGG 0.634675 6_3:-5469339 None:intergenic
GGCGCATCTATTCGTCCTGG+TGG 0.652243 6_3:+5469044 Msa0935090:CDS
CCGGTTACCGCATAAACTGT+GGG 0.661149 6_3:+5470450 Msa0935090:CDS
AAGTGGACTTCCAAGGCCTG+AGG 0.667175 6_3:+5469273 Msa0935090:CDS
TCTTGAGCAAGCTCATTGTG+AGG 0.667888 6_3:-5466372 None:intergenic
TGGAATAGACTATAACCACC+AGG 0.682936 6_3:-5469059 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTAATTTTTTTAT+GGG - chr6_3:5467943-5467962 None:intergenic 0.0%
!!! TTTATTAATTAATTTTTTTA+TGG - chr6_3:5467944-5467963 None:intergenic 0.0%
!! TATTCCAAAATTAATATAAA+AGG + chr6_3:5467183-5467202 Msa0935090:intron 10.0%
!!! TAAACCTTTTATATTAATTT+TGG - chr6_3:5467190-5467209 None:intergenic 10.0%
!! AATTAATATAAAAGGTTTAT+TGG + chr6_3:5467191-5467210 Msa0935090:intron 10.0%
!! ATCAAAAAAAAAAATTATAG+GGG - chr6_3:5467709-5467728 None:intergenic 10.0%
!! CTAGAAAAATAAAATAAAAT+TGG - chr6_3:5467788-5467807 None:intergenic 10.0%
!! ATAAAAAAAAAATTTACATG+GGG + chr6_3:5467872-5467891 Msa0935090:intron 10.0%
!! TAATAAAAAATTCACATTTA+AGG + chr6_3:5467957-5467976 Msa0935090:intron 10.0%
!!! AACCTATGATTTTATTTATA+GGG + chr6_3:5465784-5465803 Msa0935090:intron 15.0%
!! CCAAATTGTTATATAATAAT+CGG - chr6_3:5466191-5466210 None:intergenic 15.0%
!!! AAGAATTCTAATTTTTCTAT+AGG + chr6_3:5467328-5467347 Msa0935090:intron 15.0%
!!! TTTTTTTATTAACGTGTTTT+CGG + chr6_3:5467412-5467431 Msa0935090:intron 15.0%
!! ACAAATAAAAAAAGGTTAAT+AGG + chr6_3:5467645-5467664 Msa0935090:intron 15.0%
!! TCAAAAAAAAAAATTATAGG+GGG - chr6_3:5467708-5467727 None:intergenic 15.0%
!! AAAACAAAAAAAATTTACAG+GGG - chr6_3:5467735-5467754 None:intergenic 15.0%
!! CAAAACAAAAAAAATTTACA+GGG - chr6_3:5467736-5467755 None:intergenic 15.0%
!! TCAAAACAAAAAAAATTTAC+AGG - chr6_3:5467737-5467756 None:intergenic 15.0%
!!! AAATAAAATTGGTTTTTGTT+TGG - chr6_3:5467777-5467796 None:intergenic 15.0%
!! TAAAAAAAAAATTTACATGG+GGG + chr6_3:5467873-5467892 Msa0935090:intron 15.0%
!!! TAATTTTTTTATGGGTTAAT+AGG - chr6_3:5467935-5467954 None:intergenic 15.0%
!! ATCACAAGTTAAATTATTTA+TGG - chr6_3:5468045-5468064 None:intergenic 15.0%
!! TTATAAAATCAATGATTAGA+CGG - chr6_3:5468460-5468479 None:intergenic 15.0%
!!! ATTAGGAAAAAAATAGATTT+TGG + chr6_3:5468661-5468680 Msa0935090:intron 15.0%
!!! AAATGATTTTTTTAGCAAAA+TGG + chr6_3:5468721-5468740 Msa0935090:intron 15.0%
!!! TATATATGATAATGTAAACA+AGG - chr6_3:5469450-5469469 None:intergenic 15.0%
!!! CATTAAATTTTTATAGTACA+TGG - chr6_3:5469535-5469554 None:intergenic 15.0%
!! TACTATAAAAATTTAATGCA+TGG + chr6_3:5469537-5469556 Msa0935090:intron 15.0%
!!! GATAGATTAAGAATAATTTT+GGG - chr6_3:5469564-5469583 None:intergenic 15.0%
!!! TGATAGATTAAGAATAATTT+TGG - chr6_3:5469565-5469584 None:intergenic 15.0%
!!! TAATTTTTTCAGTAATCAAT+TGG - chr6_3:5470574-5470593 None:intergenic 15.0%
!! ATTACTGAAAAAATTATCAA+CGG + chr6_3:5470578-5470597 Msa0935090:CDS 15.0%
!! TGAGATTAATTCATATACTT+TGG + chr6_3:5465101-5465120 Msa0935090:CDS 20.0%
!!! GAACCTATGATTTTATTTAT+AGG + chr6_3:5465783-5465802 Msa0935090:intron 20.0%
!! GAAAAAAAGAAGTTAAAAGT+TGG - chr6_3:5466076-5466095 None:intergenic 20.0%
!! CCGATTATTATATAACAATT+TGG + chr6_3:5466188-5466207 Msa0935090:intron 20.0%
!! GGATAATAGATGTTATTATA+GGG - chr6_3:5466312-5466331 None:intergenic 20.0%
!! TGGATAATAGATGTTATTAT+AGG - chr6_3:5466313-5466332 None:intergenic 20.0%
!!! ATTGCTAATAAGTTGATATT+TGG - chr6_3:5466484-5466503 None:intergenic 20.0%
!! AAACATTGTATTCTAGTAAA+TGG - chr6_3:5466549-5466568 None:intergenic 20.0%
!!! TTTACTAGAATACAATGTTT+TGG + chr6_3:5466549-5466568 Msa0935090:intron 20.0%
!! ATAAACTGTTCCATTTATTA+TGG - chr6_3:5466835-5466854 None:intergenic 20.0%
!! ATAATAAATGGAACAGTTTA+TGG + chr6_3:5466834-5466853 Msa0935090:CDS 20.0%
!!! AGTTACTTGTTTAATTTGAA+AGG + chr6_3:5467054-5467073 Msa0935090:intron 20.0%
!!! GTTACTTGTTTAATTTGAAA+GGG + chr6_3:5467055-5467074 Msa0935090:intron 20.0%
!! AAAAAAATTCATTAACTCTC+TGG - chr6_3:5467398-5467417 None:intergenic 20.0%
!!! TAACCTTTTTTTATTTGTCA+CGG - chr6_3:5467643-5467662 None:intergenic 20.0%
!!! TAGAAATTTTCGTTTTTGTT+TGG + chr6_3:5467805-5467824 Msa0935090:intron 20.0%
!!! ATCAAAACACTTTTTTTTAC+AGG + chr6_3:5467843-5467862 Msa0935090:intron 20.0%
!!! TCAAAACACTTTTTTTTACA+GGG + chr6_3:5467844-5467863 Msa0935090:intron 20.0%
!! AAGTTTCTATGAAATTAGAA+TGG + chr6_3:5468109-5468128 Msa0935090:intron 20.0%
!!! TGAAATAGATTTTCATTTTG+AGG + chr6_3:5468694-5468713 Msa0935090:intron 20.0%
!! CATATCAACATATGTAAATT+TGG - chr6_3:5469942-5469961 None:intergenic 20.0%
! TGATAAAATCAATGATGAGA+CGG - chr6_3:5465330-5465349 None:intergenic 25.0%
! AAGTTGTCATATATAGCTTA+TGG - chr6_3:5465383-5465402 None:intergenic 25.0%
! TTCAAATATGCACTTAGATA+TGG - chr6_3:5465489-5465508 None:intergenic 25.0%
! ACTCAATTGGATCAAATTAT+AGG + chr6_3:5465508-5465527 Msa0935090:intron 25.0%
! TGACATAAAAAAGAAGTGAA+TGG + chr6_3:5465722-5465741 Msa0935090:intron 25.0%
! GTCCCTATAAATAAAATCAT+AGG - chr6_3:5465789-5465808 None:intergenic 25.0%
!! ATCATTTTGTCCAATATCAA+TGG - chr6_3:5465871-5465890 None:intergenic 25.0%
! CATATCAACATATGTAAACT+TGG - chr6_3:5466454-5466473 None:intergenic 25.0%
! TGAGATTTAAATCATTACCT+TGG - chr6_3:5466515-5466534 None:intergenic 25.0%
! AAAACTGAATTTGATATGAG+CGG - chr6_3:5466718-5466737 None:intergenic 25.0%
! ATCCTTCTAAACATATTAGT+TGG + chr6_3:5466871-5466890 Msa0935090:CDS 25.0%
! TCCTTCTAAACATATTAGTT+GGG + chr6_3:5466872-5466891 Msa0935090:CDS 25.0%
! TTACCATAAATTATGTAGCT+AGG + chr6_3:5467079-5467098 Msa0935090:intron 25.0%
! AAACCTAGCTACATAATTTA+TGG - chr6_3:5467085-5467104 None:intergenic 25.0%
! AATATAAAAGGTTTATTGGC+AGG + chr6_3:5467195-5467214 Msa0935090:intron 25.0%
! GAAGGATTAGAGTTATTATA+CGG + chr6_3:5467300-5467319 Msa0935090:intron 25.0%
! TATGAGATAGAGTAAGTAAT+TGG - chr6_3:5467442-5467461 None:intergenic 25.0%
! CTTACTCTATCTCATAAATT+TGG + chr6_3:5467446-5467465 Msa0935090:intron 25.0%
! CTTACATATTATCAACCAAA+TGG + chr6_3:5467589-5467608 Msa0935090:intron 25.0%
! AAACCGTGACAAATAAAAAA+AGG + chr6_3:5467637-5467656 Msa0935090:intron 25.0%
! AAAAATTATAGGGGGAAAAA+CGG - chr6_3:5467700-5467719 None:intergenic 25.0%
!!! CAAAACACTTTTTTTTACAG+GGG + chr6_3:5467845-5467864 Msa0935090:intron 25.0%
!!! AAAACACTTTTTTTTACAGG+GGG + chr6_3:5467846-5467865 Msa0935090:intron 25.0%
! CAATATGTATGAATCTGAAA+TGG - chr6_3:5468170-5468189 None:intergenic 25.0%
! GGCTAATAATTCATGTATTA+TGG + chr6_3:5468225-5468244 Msa0935090:intron 25.0%
! AAGTAAGTAGAAACAAACAT+TGG + chr6_3:5468478-5468497 Msa0935090:intron 25.0%
! AGTAAGTAGAAACAAACATT+GGG + chr6_3:5468479-5468498 Msa0935090:intron 25.0%
!!! TCTATTTTTTTCCTAATGCA+AGG - chr6_3:5468658-5468677 None:intergenic 25.0%
!!! TTCAATTTTGTGTTTTTGTG+TGG + chr6_3:5468925-5468944 Msa0935090:intron 25.0%
! TTCAAATATGCACTTAGATA+TGG - chr6_3:5465489-5465508 None:intergenic 25.0%
! TCCAATATCAATTGTGTAAA+GGG - chr6_3:5469311-5469330 None:intergenic 25.0%
!! TGATAATGTAAACAAGGATT+TGG - chr6_3:5469444-5469463 None:intergenic 25.0%
! TTATGAGTAAATCTTGAACT+TGG + chr6_3:5469477-5469496 Msa0935090:intron 25.0%
!!! GGCTCTAAAATATGATAAAT+AGG - chr6_3:5469594-5469613 None:intergenic 25.0%
!! TTTTAGCAACTATACAATGA+AGG + chr6_3:5469728-5469747 Msa0935090:intron 25.0%
! TCATAAGAGAAGTAATTGAA+GGG - chr6_3:5469800-5469819 None:intergenic 25.0%
!! ATTGCTGATTAGTTCATATT+TGG - chr6_3:5469972-5469991 None:intergenic 25.0%
! ATCCTTCTCAACATATTATT+TGG + chr6_3:5470519-5470538 Msa0935090:CDS 25.0%
! TCCTTCTCAACATATTATTT+GGG + chr6_3:5470520-5470539 Msa0935090:CDS 25.0%
! TACCCTGCAATTTACAATTT+TGG + chr6_3:5465199-5465218 Msa0935090:CDS 30.0%
CACCAAAATTGTAAATTGCA+GGG - chr6_3:5465204-5465223 None:intergenic 30.0%
TCACCAAAATTGTAAATTGC+AGG - chr6_3:5465205-5465224 None:intergenic 30.0%
AGTGCATATTTGAACTCAAT+TGG + chr6_3:5465495-5465514 Msa0935090:intron 30.0%
ATTGGATCAAATTATAGGCA+TGG + chr6_3:5465513-5465532 Msa0935090:intron 30.0%
TCCAATATCAATGGTGTAAA+CGG - chr6_3:5465862-5465881 None:intergenic 30.0%
CTTCAGAAGAACAAGTTAAA+AGG + chr6_3:5465913-5465932 Msa0935090:intron 30.0%
CAATCATACTGCAATGTAAT+CGG - chr6_3:5466027-5466046 None:intergenic 30.0%
! AAAAGTTGGTTACACCATAA+CGG - chr6_3:5466062-5466081 None:intergenic 30.0%
CAAACGACAAGTATTACAAA+AGG - chr6_3:5466098-5466117 None:intergenic 30.0%
! CTTTTGTAATACTTGTCGTT+TGG + chr6_3:5466096-5466115 Msa0935090:intron 30.0%
ATCTATTATCCACACAAGAA+GGG + chr6_3:5466321-5466340 Msa0935090:CDS 30.0%
AAGACCAAGTGTTTCAATTA+AGG + chr6_3:5466412-5466431 Msa0935090:CDS 30.0%
TTCTCCTTAATTGAAACACT+TGG - chr6_3:5466419-5466438 None:intergenic 30.0%
ACATATGTAAACTTGGCTAA+TGG - chr6_3:5466447-5466466 None:intergenic 30.0%
! TAACTCTAATGCTTGATTTG+TGG + chr6_3:5466737-5466756 Msa0935090:intron 30.0%
TATGGTTACCACATAAATTG+TGG + chr6_3:5466801-5466820 Msa0935090:CDS 30.0%
ATGGTTACCACATAAATTGT+GGG + chr6_3:5466802-5466821 Msa0935090:CDS 30.0%
! TGTTTAGAAGGATTTTCACA+TGG - chr6_3:5466864-5466883 None:intergenic 30.0%
TCCCAACTAATATGTTTAGA+AGG - chr6_3:5466876-5466895 None:intergenic 30.0%
TCTAAACATATTAGTTGGGA+TGG + chr6_3:5466876-5466895 Msa0935090:CDS 30.0%
GTTGCTAAACAAATTCTCTA+TGG + chr6_3:5466930-5466949 Msa0935090:CDS 30.0%
CATATATATCCACTGAATCA+TGG - chr6_3:5467018-5467037 None:intergenic 30.0%
GATTCAGTGGATATATATGA+TGG + chr6_3:5467019-5467038 Msa0935090:intron 30.0%
TCTATAGGTCTACTAATTCT+TGG + chr6_3:5467343-5467362 Msa0935090:intron 30.0%
AATTCTTGGTCAGATTACTA+AGG + chr6_3:5467357-5467376 Msa0935090:intron 30.0%
ATTCTTGGTCAGATTACTAA+GGG + chr6_3:5467358-5467377 Msa0935090:intron 30.0%
! AAATTTGGCTCAAAACCAAA+TGG + chr6_3:5467461-5467480 Msa0935090:intron 30.0%
GTTTGATCATAGAAAGACTT+GGG - chr6_3:5467621-5467640 None:intergenic 30.0%
GTCTTTATCCCATGTAATAT+AGG + chr6_3:5467667-5467686 Msa0935090:intron 30.0%
GGAAATGACCTATATTACAT+GGG - chr6_3:5467678-5467697 None:intergenic 30.0%
AAAATTATAGGGGGAAAAAC+GGG - chr6_3:5467699-5467718 None:intergenic 30.0%
TATCCTGCAATTTACAACTT+TGG + chr6_3:5468329-5468348 Msa0935090:CDS 30.0%
AAATGTTGCATATACTGTTC+CGG - chr6_3:5468372-5468391 None:intergenic 30.0%
ACAGTATATGCAACATTTAC+AGG + chr6_3:5468374-5468393 Msa0935090:CDS 30.0%
GAGAGTAGAGATAAGATAAT+GGG - chr6_3:5468845-5468864 None:intergenic 30.0%
AGAGAGTAGAGATAAGATAA+TGG - chr6_3:5468846-5468865 None:intergenic 30.0%
! GAGTTGATTAAACAGAATCT+TGG - chr6_3:5469129-5469148 None:intergenic 30.0%
AGTAATGAAATGCAAAGATG+AGG - chr6_3:5469172-5469191 None:intergenic 30.0%
TTCCTAATGAATGATAATCC+AGG + chr6_3:5469232-5469251 Msa0935090:intron 30.0%
TCCTAATGAATGATAATCCA+GGG + chr6_3:5469233-5469252 Msa0935090:intron 30.0%
GTCCAATATCAATTGTGTAA+AGG - chr6_3:5469312-5469331 None:intergenic 30.0%
TAATGTAAACAAGGATTTGG+TGG - chr6_3:5469441-5469460 None:intergenic 30.0%
CTCATAAGAGAAGTAATTGA+AGG - chr6_3:5469801-5469820 None:intergenic 30.0%
TTCTCTTATGAGAACAAGAA+GGG + chr6_3:5469809-5469828 Msa0935090:intron 30.0%
GGAATTTAACAAGAAGCTAA+AGG + chr6_3:5469880-5469899 Msa0935090:intron 30.0%
TACGAGCTTGAAATTTGAAT+TGG + chr6_3:5470156-5470175 Msa0935090:intron 30.0%
TCGACGTAACAATTTATGAT+TGG + chr6_3:5470323-5470342 Msa0935090:intron 30.0%
CGTAACAATTTATGATTGGT+TGG + chr6_3:5470327-5470346 Msa0935090:intron 30.0%
GGGTCGAAAGAAATAATAAA+TGG + chr6_3:5470470-5470489 Msa0935090:CDS 30.0%
TCCCAAATAATATGTTGAGA+AGG - chr6_3:5470524-5470543 None:intergenic 30.0%
TCTCAACATATTATTTGGGA+TGG + chr6_3:5470524-5470543 Msa0935090:CDS 30.0%
TATAAACATGCCTTTCCAAT+TGG - chr6_3:5470626-5470645 None:intergenic 30.0%
TATGCAACATACACAACTGT+TGG + chr6_3:5465250-5465269 Msa0935090:CDS 35.0%
ATGCAACATACACAACTGTT+GGG + chr6_3:5465251-5465270 Msa0935090:CDS 35.0%
CCAAAGTAGCTTATACCATT+AGG - chr6_3:5465280-5465299 None:intergenic 35.0%
CCTAATGGTATAAGCTACTT+TGG + chr6_3:5465277-5465296 Msa0935090:intron 35.0%
AAAGATTGGACTATAACCAC+CGG - chr6_3:5465574-5465593 None:intergenic 35.0%
GGTTATAGTCCAATCTTTCT+TGG + chr6_3:5465576-5465595 Msa0935090:intron 35.0%
ACTTGAAGACCAAGAAAGAT+TGG - chr6_3:5465588-5465607 None:intergenic 35.0%
! GAGTTGATTGAAGAGAATCT+TGG - chr6_3:5465640-5465659 None:intergenic 35.0%
TCACCACTCATAAGGATTAA+CGG - chr6_3:5465752-5465771 None:intergenic 35.0%
TTTCTCTATCACCACTCATA+AGG - chr6_3:5465760-5465779 None:intergenic 35.0%
TTAGAGAATTCCTCATTCCT+TGG - chr6_3:5465837-5465856 None:intergenic 35.0%
AAGGAATGAGGAATTCTCTA+AGG + chr6_3:5465836-5465855 Msa0935090:CDS 35.0%
! TGAAGTGTTCTGTAAACCAA+TGG - chr6_3:5465898-5465917 None:intergenic 35.0%
GTAATCCTTGATCTGAGAAT+CGG + chr6_3:5465978-5465997 Msa0935090:intron 35.0%
AAACCATTTGAACCAAGACT+CGG + chr6_3:5466141-5466160 Msa0935090:intron 35.0%
TTTCAGCAACTCTACAATGA+AGG + chr6_3:5466240-5466259 Msa0935090:intron 35.0%
TTCAGCAACTCTACAATGAA+GGG + chr6_3:5466241-5466260 Msa0935090:intron 35.0%
!! GTGTTTTGGATTCACAATGT+CGG + chr6_3:5466270-5466289 Msa0935090:CDS 35.0%
CATCTATTATCCACACAAGA+AGG + chr6_3:5466320-5466339 Msa0935090:CDS 35.0%
!!! AGAATACAATGTTTTGGCCA+AGG + chr6_3:5466555-5466574 Msa0935090:intron 35.0%
!!! CAAGGTTTTAAATTGCGATC+CGG + chr6_3:5466573-5466592 Msa0935090:intron 35.0%
! AATCCATTGGAATTTTGCTG+TGG + chr6_3:5466771-5466790 Msa0935090:CDS 35.0%
!! TTTTGCTGTGGAAGTTACTA+TGG + chr6_3:5466783-5466802 Msa0935090:CDS 35.0%
AAGCAAGCAATAATGATCGA+AGG + chr6_3:5467282-5467301 Msa0935090:intron 35.0%
!! TCATTAACTCTCTGGTTCTT+AGG - chr6_3:5467390-5467409 None:intergenic 35.0%
TCAAAACCAAATGGTTCTTC+TGG + chr6_3:5467470-5467489 Msa0935090:intron 35.0%
!!! GTGTTTTTTCATGTCTCGAA+CGG + chr6_3:5467513-5467532 Msa0935090:intron 35.0%
!! TGGTAGGTTTTTAAGCAAGT+GGG + chr6_3:5467548-5467567 Msa0935090:intron 35.0%
GGTTTGATCATAGAAAGACT+TGG - chr6_3:5467622-5467641 None:intergenic 35.0%
GGGAAATGACCTATATTACA+TGG - chr6_3:5467679-5467698 None:intergenic 35.0%
!!! TTTTGATTTACCCCCTTAGT+AGG + chr6_3:5467751-5467770 Msa0935090:intron 35.0%
!! TTTTTGTTTGGCCTACTAAG+GGG - chr6_3:5467765-5467784 None:intergenic 35.0%
!! GTTTTTGTTTGGCCTACTAA+GGG - chr6_3:5467766-5467785 None:intergenic 35.0%
!! TCGTTTTTGTTTGGCCTATT+AGG + chr6_3:5467814-5467833 Msa0935090:intron 35.0%
!! CGTTTTTGTTTGGCCTATTA+GGG + chr6_3:5467815-5467834 Msa0935090:intron 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG + chr6_3:5467816-5467835 Msa0935090:intron 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG + chr6_3:5467817-5467836 Msa0935090:intron 35.0%
!!! GTTTTGATTTACCCCCTAAT+AGG - chr6_3:5467831-5467850 None:intergenic 35.0%
AAATTTACATGGGGGAAAAC+CGG + chr6_3:5467881-5467900 Msa0935090:intron 35.0%
CCTGTAATATAGGTCATTTC+CGG - chr6_3:5467903-5467922 None:intergenic 35.0%
CGGAAATGACCTATATTACA+GGG + chr6_3:5467901-5467920 Msa0935090:intron 35.0%
GGAAATGACCTATATTACAG+GGG + chr6_3:5467902-5467921 Msa0935090:intron 35.0%
GAAATGACCTATATTACAGG+GGG + chr6_3:5467903-5467922 Msa0935090:intron 35.0%
GTATTTACCCCCTGTAATAT+AGG - chr6_3:5467913-5467932 None:intergenic 35.0%
! GGTCACATGTGATAAGATTT+TGG - chr6_3:5468024-5468043 None:intergenic 35.0%
CCTCATAGAATTCATGATTG+AGG - chr6_3:5468207-5468226 None:intergenic 35.0%
CCTCAATCATGAATTCTATG+AGG + chr6_3:5468204-5468223 Msa0935090:intron 35.0%
! TGAAAGTACATGTCACAAAC+AGG - chr6_3:5468259-5468278 None:intergenic 35.0%
TCACCAAAGTTGTAAATTGC+AGG - chr6_3:5468335-5468354 None:intergenic 35.0%
! CAACTTTGGTGACTCAAATT+CGG + chr6_3:5468343-5468362 Msa0935090:CDS 35.0%
! AGCTTCTTTGGAAACATATC+AGG + chr6_3:5468419-5468438 Msa0935090:intron 35.0%
!!! GATAATGGGCTTGTTTGTTT+TGG - chr6_3:5468831-5468850 None:intergenic 35.0%
AGTGCATATTTGAACTCAGT+TGG + chr6_3:5468984-5469003 Msa0935090:CDS 35.0%
ACTCAGTTGGATCAAATTAC+AGG + chr6_3:5468997-5469016 Msa0935090:CDS 35.0%
GGTTATAGTCTATTCCATCT+TGG + chr6_3:5469065-5469084 Msa0935090:CDS 35.0%
GTTTCTGTTATGCCTTTCAT+TGG + chr6_3:5469193-5469212 Msa0935090:intron 35.0%
CAATTTCACCATCCAATGAA+AGG - chr6_3:5469208-5469227 None:intergenic 35.0%
CTTTCATTGGATGGTGAAAT+TGG + chr6_3:5469206-5469225 Msa0935090:intron 35.0%
TCCCTGGATTATCATTCATT+AGG - chr6_3:5469237-5469256 None:intergenic 35.0%
GCCCTTTACACAATTGATAT+TGG + chr6_3:5469307-5469326 Msa0935090:CDS 35.0%
TGAAGTGTGTTGAAAACCAT+AGG - chr6_3:5469347-5469366 None:intergenic 35.0%
! GAGAATTGGCTCAATATTTC+AGG - chr6_3:5469394-5469413 None:intergenic 35.0%
GTATTACACTGTCTGCTATT+TGG + chr6_3:5469508-5469527 Msa0935090:intron 35.0%
ACTATGCACATGTGCTAAAT+AGG - chr6_3:5469615-5469634 None:intergenic 35.0%
CTTCTCTTATGAGAACAAGA+AGG + chr6_3:5469808-5469827 Msa0935090:intron 35.0%
TTCTCCTTAGTTGAGACATT+TGG - chr6_3:5469907-5469926 None:intergenic 35.0%
ACATATGTAAATTTGGCCAG+TGG - chr6_3:5469935-5469954 None:intergenic 35.0%
ATGAACTAATCAGCAATGCA+AGG + chr6_3:5469975-5469994 Msa0935090:intron 35.0%
TAAAGACTTGAAGATCACCT+TGG - chr6_3:5470003-5470022 None:intergenic 35.0%
AAGGTGATCTTCAAGTCTTT+AGG + chr6_3:5470002-5470021 Msa0935090:intron 35.0%
!! ACTTGAGTTTGATTTGTGAC+AGG + chr6_3:5470389-5470408 Msa0935090:intron 35.0%
TGTTGAGAAGGATTTGTACA+TGG - chr6_3:5470512-5470531 None:intergenic 35.0%
!! AATCAATTGGTTTGCCCTTT+GGG - chr6_3:5470561-5470580 None:intergenic 35.0%
!! TAATCAATTGGTTTGCCCTT+TGG - chr6_3:5470562-5470581 None:intergenic 35.0%
GGTGACTCAAATTCAGATAC+TGG + chr6_3:5465220-5465239 Msa0935090:CDS 40.0%
AAGATTGGACTATAACCACC+GGG - chr6_3:5465573-5465592 None:intergenic 40.0%
GATCCGTTAATCCTTATGAG+TGG + chr6_3:5465746-5465765 Msa0935090:intron 40.0%
ACAGAACCACCTTTCAAAAG+TGG + chr6_3:5465807-5465826 Msa0935090:CDS 40.0%
!! CTTGGAAGACCACTTTTGAA+AGG - chr6_3:5465819-5465838 None:intergenic 40.0%
CTTTCAAAAGTGGTCTTCCA+AGG + chr6_3:5465817-5465836 Msa0935090:CDS 40.0%
GCCGTTTACACCATTGATAT+TGG + chr6_3:5465858-5465877 Msa0935090:CDS 40.0%
GGACAAAATGATCTTGCCAT+TGG + chr6_3:5465879-5465898 Msa0935090:CDS 40.0%
! GAGAATTGGCTCAAGATATC+AGG - chr6_3:5465945-5465964 None:intergenic 40.0%
! TGAACCAAGTTGAACCGTTA+TGG + chr6_3:5466045-5466064 Msa0935090:intron 40.0%
TACACCATAACGGTTCAACT+TGG - chr6_3:5466052-5466071 None:intergenic 40.0%
! CTTGTCGTTTGGTTCAATTG+TGG + chr6_3:5466107-5466126 Msa0935090:intron 40.0%
TCAGCAACTCTACAATGAAG+GGG + chr6_3:5466242-5466261 Msa0935090:intron 40.0%
ATTCACAATGTCGGTCCAAT+TGG + chr6_3:5466279-5466298 Msa0935090:CDS 40.0%
TTATAGGGCAAGCATCCAAT+TGG - chr6_3:5466297-5466316 None:intergenic 40.0%
GTGAGGTATAACACAACCAT+TGG - chr6_3:5466358-5466377 None:intergenic 40.0%
ATTAGCAATGCAAAGAGCCA+AGG + chr6_3:5466495-5466514 Msa0935090:CDS 40.0%
! CGGATCGCAATTTAAAACCT+TGG - chr6_3:5466575-5466594 None:intergenic 40.0%
TTTAAATTGCGATCCGGTCA+CGG + chr6_3:5466579-5466598 Msa0935090:intron 40.0%
!! TCTAATGCTTGATTTGTGGC+AGG + chr6_3:5466741-5466760 Msa0935090:intron 40.0%
CTTCCACAGCAAAATTCCAA+TGG - chr6_3:5466777-5466796 None:intergenic 40.0%
CCTTCAACCCACAATTTATG+TGG - chr6_3:5466812-5466831 None:intergenic 40.0%
! CCACATAAATTGTGGGTTGA+AGG + chr6_3:5466809-5466828 Msa0935090:CDS 40.0%
GGGTTGAAGGCCATAATAAA+TGG + chr6_3:5466822-5466841 Msa0935090:CDS 40.0%
!! AACCCATTGATTTGCAGCTT+GGG - chr6_3:5466913-5466932 None:intergenic 40.0%
!! AACTCTCTGGTTCTTAGGAA+AGG - chr6_3:5467385-5467404 None:intergenic 40.0%
GGACGTGAATTAGGACAAAA+CGG + chr6_3:5467491-5467510 Msa0935090:intron 40.0%
!! GTGGTAGGTTTTTAAGCAAG+TGG + chr6_3:5467547-5467566 Msa0935090:intron 40.0%
!! GGTAGGTTTTTAAGCAAGTG+GGG + chr6_3:5467549-5467568 Msa0935090:intron 40.0%
!! GTAGGTTTTTAAGCAAGTGG+GGG + chr6_3:5467550-5467569 Msa0935090:intron 40.0%
!! TAGGTTTTTAAGCAAGTGGG+GGG + chr6_3:5467551-5467570 Msa0935090:intron 40.0%
!! TTTTGTTTGGCCTACTAAGG+GGG - chr6_3:5467764-5467783 None:intergenic 40.0%
!! GGTTTTTGTTTGGCCTACTA+AGG - chr6_3:5467767-5467786 None:intergenic 40.0%
CCGGAAATGACCTATATTAC+AGG + chr6_3:5467900-5467919 Msa0935090:intron 40.0%
AAGAAGCTTATACCGTTAGG+AGG - chr6_3:5468407-5468426 None:intergenic 40.0%
CCAAAGAAGCTTATACCGTT+AGG - chr6_3:5468410-5468429 None:intergenic 40.0%
CCTAACGGTATAAGCTTCTT+TGG + chr6_3:5468407-5468426 Msa0935090:intron 40.0%
ATATCAGGAAGAGCTTCTGA+TGG + chr6_3:5468434-5468453 Msa0935090:intron 40.0%
ACACTTGAGTTCCTTGCATT+AGG + chr6_3:5468644-5468663 Msa0935090:intron 40.0%
! GTTTTTGTGTGGACATATGC+AGG + chr6_3:5468936-5468955 Msa0935090:intron 40.0%
GTTGGATCAAATTACAGGCA+TGG + chr6_3:5469002-5469021 Msa0935090:CDS 40.0%
TGGAATAGACTATAACCACC+AGG - chr6_3:5469062-5469081 None:intergenic 40.0%
GAGATACTTGAAGTCCAAGA+TGG - chr6_3:5469082-5469101 None:intergenic 40.0%
CTGTTATGCCTTTCATTGGA+TGG + chr6_3:5469197-5469216 Msa0935090:intron 40.0%
ACAGAACCACCTTTCAAAAG+TGG + chr6_3:5465807-5465826 Msa0935090:CDS 40.0%
!! CTTGGAAGTCCACTTTTGAA+AGG - chr6_3:5469268-5469287 None:intergenic 40.0%
! CTTTCAAAAGTGGACTTCCA+AGG + chr6_3:5469266-5469285 Msa0935090:CDS 40.0%
TGTGTTGAAAACCATAGGCA+AGG - chr6_3:5469342-5469361 None:intergenic 40.0%
! TGGTTTTCAACACACTTCAG+AGG + chr6_3:5469348-5469367 Msa0935090:CDS 40.0%
CTTCAGAGGAACAAGTTCAA+AGG + chr6_3:5469362-5469381 Msa0935090:CDS 40.0%
ACCAATTACCTTCACTGCTT+GGG - chr6_3:5469416-5469435 None:intergenic 40.0%
TACCAATTACCTTCACTGCT+TGG - chr6_3:5469417-5469436 None:intergenic 40.0%
GCAGACAGTGTAATACTTCA+AGG - chr6_3:5469504-5469523 None:intergenic 40.0%
TTAGCACATGTGCATAGTTC+AGG + chr6_3:5469617-5469636 Msa0935090:intron 40.0%
TAGCACATGTGCATAGTTCA+GGG + chr6_3:5469618-5469637 Msa0935090:intron 40.0%
TTATCACTCGCTCTCCTATT+TGG - chr6_3:5469645-5469664 None:intergenic 40.0%
! AGGAGAGCGAGTGATAATTT+TGG + chr6_3:5469648-5469667 Msa0935090:intron 40.0%
! GGAGAGCGAGTGATAATTTT+GGG + chr6_3:5469649-5469668 Msa0935090:intron 40.0%
! GAGAGCGAGTGATAATTTTG+GGG + chr6_3:5469650-5469669 Msa0935090:intron 40.0%
ATACACAACACAGGTCCAAT+TGG + chr6_3:5469767-5469786 Msa0935090:intron 40.0%
ACCTCAGAACAAAATAGCTC+AGG + chr6_3:5469859-5469878 Msa0935090:intron 40.0%
!! TCCTGAGCTATTTTGTTCTG+AGG - chr6_3:5469863-5469882 None:intergenic 40.0%
AGGACCAAATGTCTCAACTA+AGG + chr6_3:5469900-5469919 Msa0935090:intron 40.0%
ACTAAGGAGAAAACTTCCAC+TGG + chr6_3:5469916-5469935 Msa0935090:intron 40.0%
TTGAATTGGCCGTTCTTGAT+CGG + chr6_3:5470170-5470189 Msa0935090:intron 40.0%
CACTAAGTCAACCACATTTG+TGG - chr6_3:5470200-5470219 None:intergenic 40.0%
!! GACAGGTTTTGTGAGTCTTT+TGG + chr6_3:5470406-5470425 Msa0935090:intron 40.0%
! AGTCTTTTGGACTTCTGTTG+CGG + chr6_3:5470419-5470438 Msa0935090:intron 40.0%
TCTGATCCACTAGTTCCAAT+TGG + chr6_3:5470608-5470627 Msa0935090:CDS 40.0%
TCCACTAGTTCCAATTGGAA+AGG + chr6_3:5470613-5470632 Msa0935090:CDS 40.0%
ACAACTGTTGGGTCTCCTAA+TGG + chr6_3:5465262-5465281 Msa0935090:CDS 45.0%
GCTGTGTGTGTGAATTATGC+AGG + chr6_3:5465447-5465466 Msa0935090:intron 45.0%
! CATGGTGCTAACTTTGCAGT+AGG + chr6_3:5465531-5465550 Msa0935090:intron 45.0%
!! GGAAGACCACTTTTGAAAGG+TGG - chr6_3:5465816-5465835 None:intergenic 45.0%
AAGTGGTCTTCCAAGGAATG+AGG + chr6_3:5465824-5465843 Msa0935090:CDS 45.0%
AAGGATTACCTGCACTGCTT+GGG - chr6_3:5465967-5465986 None:intergenic 45.0%
! ACTGACCGATTCTCAGATCA+AGG - chr6_3:5465986-5466005 None:intergenic 45.0%
GATCTGAGAATCGGTCAGTT+CGG + chr6_3:5465987-5466006 Msa0935090:intron 45.0%
ACTGTTAAACCTCCGAGTCT+TGG - chr6_3:5466156-5466175 None:intergenic 45.0%
!!! ATGAAGGGGCAAGAGTGTTT+TGG + chr6_3:5466256-5466275 Msa0935090:intron 45.0%
TCCACACAAGAAGGGTAACT+TGG + chr6_3:5466329-5466348 Msa0935090:CDS 45.0%
TCCAAGTTACCCTTCTTGTG+TGG - chr6_3:5466333-5466352 None:intergenic 45.0%
AAGGGTAACTTGGATGCCAA+TGG + chr6_3:5466339-5466358 Msa0935090:CDS 45.0%
TCTTGAGCAAGCTCATTGTG+AGG - chr6_3:5466375-5466394 None:intergenic 45.0%
CTACAACGCGAATGCAATTG+AGG - chr6_3:5466666-5466685 None:intergenic 45.0%
!! GGCAGGTTTTGTGAATCCAT+TGG + chr6_3:5466758-5466777 Msa0935090:intron 45.0%
ACTCCCAAGCTGCAAATCAA+TGG + chr6_3:5466907-5466926 Msa0935090:CDS 45.0%
CTCCCAAGCTGCAAATCAAT+GGG + chr6_3:5466908-5466927 Msa0935090:CDS 45.0%
!! CAACCCATTGATTTGCAGCT+TGG - chr6_3:5466914-5466933 None:intergenic 45.0%
! TGAAACTGGTGGATCAGAGA+AGG - chr6_3:5466958-5466977 None:intergenic 45.0%
TCTGATCCACCAGTTTCAGT+TGG + chr6_3:5466960-5466979 Msa0935090:CDS 45.0%
CTGATCCACCAGTTTCAGTT+GGG + chr6_3:5466961-5466980 Msa0935090:CDS 45.0%
TGCATGATGCCATGATTCAG+TGG + chr6_3:5467006-5467025 Msa0935090:intron 45.0%
TCACGTCCAGAAGAACCATT+TGG - chr6_3:5467479-5467498 None:intergenic 45.0%
GGTTCTTCTGGACGTGAATT+AGG + chr6_3:5467482-5467501 Msa0935090:intron 45.0%
AGACTTGGGCTTGAACCATT+TGG - chr6_3:5467607-5467626 None:intergenic 45.0%
ATGGTCACTCTACTTAGCTC+TGG + chr6_3:5468128-5468147 Msa0935090:intron 45.0%
GGTGACTCAAATTCGGATAC+CGG + chr6_3:5468350-5468369 Msa0935090:CDS 45.0%
ACAGGTGTTCAACCTCCTAA+CGG + chr6_3:5468392-5468411 Msa0935090:CDS 45.0%
!! GGAAGTCCACTTTTGAAAGG+TGG - chr6_3:5469265-5469284 None:intergenic 45.0%
GGACAAAATGACCTTGCCTA+TGG + chr6_3:5469328-5469347 Msa0935090:CDS 45.0%
TCCCAAGCAGTGAAGGTAAT+TGG + chr6_3:5469412-5469431 Msa0935090:intron 45.0%
GCATAGTTCAGGGACCAAAT+AGG + chr6_3:5469628-5469647 Msa0935090:intron 45.0%
! GTGTTCTGGATACACAACAC+AGG + chr6_3:5469758-5469777 Msa0935090:intron 45.0%
TTGAAGGGCAAGCATCCAAT+TGG - chr6_3:5469785-5469804 None:intergenic 45.0%
AAGGGTAACCTAGATGCCAA+TGG + chr6_3:5469827-5469846 Msa0935090:intron 45.0%
TGTGGTTGACCGATCAAGAA+CGG - chr6_3:5470182-5470201 None:intergenic 45.0%
TGATCGGTCAACCACAAATG+TGG + chr6_3:5470186-5470205 Msa0935090:intron 45.0%
CTTTCGACCCACAGTTTATG+CGG - chr6_3:5470460-5470479 None:intergenic 45.0%
ATGGCATACACTACTCCCAA+AGG + chr6_3:5470543-5470562 Msa0935090:CDS 45.0%
TGGCATACACTACTCCCAAA+GGG + chr6_3:5470544-5470563 Msa0935090:CDS 45.0%
! TGGAACTAGTGGATCAGAGA+AGG - chr6_3:5470606-5470625 None:intergenic 45.0%
GCCTTTCCAATTGGAACTAG+TGG - chr6_3:5470617-5470636 None:intergenic 45.0%
!! AATCAAAAAAAAAAATTATA+GGG - chr6_3:5467710-5467729 None:intergenic 5.0%
!! AAATCAAAAAAAAAAATTAT+AGG - chr6_3:5467711-5467730 None:intergenic 5.0%
!! AAATAAAAAAAAAATTTACA+TGG + chr6_3:5467870-5467889 Msa0935090:intron 5.0%
!! AATAAAAAAAAAATTTACAT+GGG + chr6_3:5467871-5467890 Msa0935090:intron 5.0%
CATCAGAAGCTCTTCCTGAG+AGG - chr6_3:5465306-5465325 None:intergenic 50.0%
CTCTCAGGAAGAGCTTCTGA+TGG + chr6_3:5465304-5465323 Msa0935090:intron 50.0%
GGTGCTAACTTTGCAGTAGG+AGG + chr6_3:5465534-5465553 Msa0935090:intron 50.0%
CAAGGATTACCTGCACTGCT+TGG - chr6_3:5465968-5465987 None:intergenic 50.0%
CCTCCGAGTCTTGGTTCAAA+TGG - chr6_3:5466147-5466166 None:intergenic 50.0%
CCATTTGAACCAAGACTCGG+AGG + chr6_3:5466144-5466163 Msa0935090:intron 50.0%
TCCACCAGTTTCAGTTGGGA+AGG + chr6_3:5466965-5466984 Msa0935090:CDS 50.0%
CATGCCTTCCCAACTGAAAC+TGG - chr6_3:5466972-5466991 None:intergenic 50.0%
TCGAACGGTACTTCTAGACG+TGG + chr6_3:5467528-5467547 Msa0935090:intron 50.0%
ACGGTACTTCTAGACGTGGT+AGG + chr6_3:5467532-5467551 Msa0935090:intron 50.0%
! CATGGTGCCAACTTTGCAGT+AGG + chr6_3:5469020-5469039 Msa0935090:CDS 50.0%
! TTGAAAGGTGGTTCTGTCCC+TGG - chr6_3:5465804-5465823 None:intergenic 50.0%
TTAGAGAAGTCCTCAGGCCT+TGG - chr6_3:5469286-5469305 None:intergenic 50.0%
!! AGGGCTTTAGAGAAGTCCTC+AGG - chr6_3:5469292-5469311 None:intergenic 50.0%
CCTTCACTGCTTGGGAGAAT+TGG - chr6_3:5469408-5469427 None:intergenic 50.0%
CCAATTCTCCCAAGCAGTGA+AGG + chr6_3:5469405-5469424 Msa0935090:intron 50.0%
!! ATGAAGGTGCGAGAGTGTTC+TGG + chr6_3:5469744-5469763 Msa0935090:intron 50.0%
TCACACAGCCATTGGCATCT+AGG - chr6_3:5469838-5469857 None:intergenic 50.0%
CTGAGGTTTCACACAGCCAT+TGG - chr6_3:5469846-5469865 None:intergenic 50.0%
ATCAGCAATGCAAGGAGCCA+AGG + chr6_3:5469983-5470002 Msa0935090:intron 50.0%
TTCTGTTGCGGCAGTTACAC+CGG + chr6_3:5470431-5470450 Msa0935090:intron 50.0%
ACCGGTTACCGCATAAACTG+TGG + chr6_3:5470449-5470468 Msa0935090:CDS 50.0%
CCCACAGTTTATGCGGTAAC+CGG - chr6_3:5470453-5470472 None:intergenic 50.0%
CCGGTTACCGCATAAACTGT+GGG + chr6_3:5470450-5470469 Msa0935090:CDS 50.0%
! AGCTACTTTGGCAGCCTCTC+AGG + chr6_3:5465289-5465308 Msa0935090:intron 55.0%
CCTGCACTGCTTGGGAGAAT+TGG - chr6_3:5465959-5465978 None:intergenic 55.0%
CCAATTCTCCCAAGCAGTGC+AGG + chr6_3:5465956-5465975 Msa0935090:intron 55.0%
GAATCGGTCAGTTCGGCGAT+TGG + chr6_3:5465994-5466013 Msa0935090:intron 55.0%
GCCTTCCCAACTGAAACTGG+TGG - chr6_3:5466969-5466988 None:intergenic 55.0%
GGTGCCAACTTTGCAGTAGG+CGG + chr6_3:5469023-5469042 Msa0935090:CDS 55.0%
! AAGTGGACTTCCAAGGCCTG+AGG + chr6_3:5469273-5469292 Msa0935090:CDS 55.0%
!! GGAGGTGCATCGATTCGTCC+CGG + chr6_3:5465552-5465571 Msa0935090:intron 60.0%
GACGCGAACATCACCGTGAC+CGG - chr6_3:5466595-5466614 None:intergenic 60.0%
TGCGCCGCCTACTGCAAAGT+TGG - chr6_3:5469030-5469049 None:intergenic 60.0%
GGCGCATCTATTCGTCCTGG+TGG + chr6_3:5469044-5469063 Msa0935090:CDS 60.0%
!! GGTGCATCGATTCGTCCCGG+TGG + chr6_3:5465555-5465574 Msa0935090:intron 65.0%
GGCGGCGCATCTATTCGTCC+TGG + chr6_3:5469041-5469060 Msa0935090:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 5465091 5470646 5465091 ID=Msa0935090;Name=Msa0935090
chr6_3 mRNA 5465091 5470646 5465091 ID=Msa0935090-mRNA-1;Parent=Msa0935090;Name=Msa0935090-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.28|0|1|1|1|8|0|477
chr6_3 exon 5465091 5465283 5465091 ID=Msa0935090-mRNA-1:exon:1674;Parent=Msa0935090-mRNA-1
chr6_3 exon 5465805 5465900 5465805 ID=Msa0935090-mRNA-1:exon:1675;Parent=Msa0935090-mRNA-1
chr6_3 exon 5466262 5466516 5466262 ID=Msa0935090-mRNA-1:exon:1676;Parent=Msa0935090-mRNA-1
chr6_3 exon 5466763 5466990 5466763 ID=Msa0935090-mRNA-1:exon:1677;Parent=Msa0935090-mRNA-1
chr6_3 exon 5468285 5468413 5468285 ID=Msa0935090-mRNA-1:exon:1678;Parent=Msa0935090-mRNA-1
chr6_3 exon 5468958 5469158 5468958 ID=Msa0935090-mRNA-1:exon:1679;Parent=Msa0935090-mRNA-1
chr6_3 exon 5469254 5469383 5469254 ID=Msa0935090-mRNA-1:exon:1680;Parent=Msa0935090-mRNA-1
chr6_3 exon 5470445 5470646 5470445 ID=Msa0935090-mRNA-1:exon:1681;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5465091 5465283 5465091 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5465805 5465900 5465805 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5466262 5466516 5466262 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5466763 5466990 5466763 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5468285 5468413 5468285 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5468958 5469158 5468958 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5469254 5469383 5469254 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
chr6_3 CDS 5470445 5470646 5470445 ID=Msa0935090-mRNA-1:cds;Parent=Msa0935090-mRNA-1
Gene Sequence

>Msa0935090

ATGAATTCTATGAGATTAATTCATATACTTTGGTTTTTCAATCTGTATGTGACATTTACATTCATTCAAGTCTCAAGTGAGAATGTTTATAACTCAAAGAAATGTGAGTACCCTGCAATTTACAATTTTGGTGACTCAAATTCAGATACTGGAGCTGTATATGCAACATACACAACTGTTGGGTCTCCTAATGGGACAGAACCACCTTTCAAAAGTGGTCTTCCAAGGAATGAGGAATTCTCTAAGGCCGTTTACACCATTGATATTGGACAAAATGATCTTGCCATTGGGGCAAGAGTGTTTTGGATTCACAATGTCGGTCCAATTGGATGCTTGCCCTATAATAACATCTATTATCCACACAAGAAGGGTAACTTGGATGCCAATGGTTGTGTTATACCTCACAATGAGCTTGCTCAAGAATATAACATGCAGCTAAAAGACCAAGTGTTTCAATTAAGGAGAAAGTTTCCATTAGCCAAGTTTACATATGTTGATATGTACACAGCCAAATATCAACTTATTAGCAATGCAAAGAGCCAAGGTTTTGTGAATCCATTGGAATTTTGCTGTGGAAGTTACTATGGTTACCACATAAATTGTGGGTTGAAGGCCATAATAAATGGAACAGTTTATGGCAATCCATGTGAAAATCCTTCTAAACATATTAGTTGGGATGGTATACACTACTCCCAAGCTGCAAATCAATGGGTTGCTAAACAAATTCTCTATGGTTCCTTCTCTGATCCACCAGTTTCAGTTGGGAAGGCATTCTCAAGTGAGAAGAATGACTATAGTAACTCTAGCAAATGTGTGTATCCTGCAATTTACAACTTTGGTGACTCAAATTCGGATACCGGAACAGTATATGCAACATTTACAGGTGTTCAACCTCCTAACGGTGAAGAACTGAAGCTACCATATCTAAGTGCATATTTGAACTCAGTTGGATCAAATTACAGGCATGGTGCCAACTTTGCAGTAGGCGGCGCATCTATTCGTCCTGGTGGTTATAGTCTATTCCATCTTGGACTTCAAGTATCTCAGTTCATATTGTTCAAGTCACACACCAAGATTCTGTTTAATCAACTCTCTAACAATAGGACAGAACCACCTTTCAAAAGTGGACTTCCAAGGCCTGAGGACTTCTCTAAAGCCCTTTACACAATTGATATTGGACAAAATGACCTTGCCTATGGTTTTCAACACACTTCAGAGGAACAAGTTCAAAGTTACACCGGTTACCGCATAAACTGTGGGTCGAAAGAAATAATAAATGGAACTGTTAACAGAAATCCATGTACAAATCCTTCTCAACATATTATTTGGGATGGCATACACTACTCCCAAAGGGCAAACCAATTGATTACTGAAAAAATTATCAACGGATCCTTCTCTGATCCACTAGTTCCAATTGGAAAGGCATGTTTATAA
Protein sequence

>Msa0935090

MNSMRLIHILWFFNLYVTFTFIQVSSENVYNSKKCEYPAIYNFGDSNSDTGAVYATYTTVGSPNGTEPPFKSGLPRNEEFSKAVYTIDIGQNDLAIGARVFWIHNVGPIGCLPYNNIYYPHKKGNLDANGCVIPHNELAQEYNMQLKDQVFQLRRKFPLAKFTYVDMYTAKYQLISNAKSQGFVNPLEFCCGSYYGYHINCGLKAIINGTVYGNPCENPSKHISWDGIHYSQAANQWVAKQILYGSFSDPPVSVGKAFSSEKNDYSNSSKCVYPAIYNFGDSNSDTGTVYATFTGVQPPNGEELKLPYLSAYLNSVGSNYRHGANFAVGGASIRPGGYSLFHLGLQVSQFILFKSHTKILFNQLSNNRTEPPFKSGLPRPEDFSKALYTIDIGQNDLAYGFQHTSEEQVQSYTGYRINCGSKEIINGTVNRNPCTNPSQHIIWDGIHYSQRANQLITEKIINGSFSDPLVPIGKACL*