Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936970 | XP_013450949.1 | 96.000 | 375 | 14 | 1 | 83 | 456 | 1 | 375 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936970 | sp|Q5EA79|GALM_BOVIN | 42.515 | 334 | 179 | 7 | 114 | 446 | 19 | 340 | 9.48e-83 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0871660 | Msa0936970 | 0.898360 | 5.729264e-77 | -8.615850e-47 |
| Msa0936970 | Msa0974340 | 0.917705 | 3.833301e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936970 | MtrunA17_Chr6g0452991 | 96.000 | 375 | 14 | 1 | 83 | 456 | 1 | 375 | 0.0 | 730 |
| Msa0936970 | MtrunA17_Chr6g0452971 | 94.400 | 375 | 20 | 1 | 83 | 456 | 1 | 375 | 0.0 | 713 |
| Msa0936970 | MtrunA17_Chr7g0217021 | 72.207 | 367 | 94 | 4 | 83 | 448 | 1 | 360 | 0.0 | 538 |
| Msa0936970 | MtrunA17_Chr4g0060521 | 52.786 | 341 | 152 | 4 | 106 | 445 | 23 | 355 | 4.45e-121 | 357 |
| Msa0936970 | MtrunA17_Chr6g0478501 | 49.123 | 342 | 167 | 5 | 109 | 448 | 3 | 339 | 1.97e-108 | 324 |
| Msa0936970 | MtrunA17_Chr2g0294751 | 96.250 | 80 | 3 | 0 | 1 | 80 | 141 | 220 | 5.67e-47 | 172 |
| Msa0936970 | MtrunA17_Chr7g0269871 | 82.500 | 80 | 13 | 1 | 1 | 80 | 142 | 220 | 1.29e-39 | 152 |
| Msa0936970 | MtrunA17_Chr1g0194841 | 81.250 | 80 | 14 | 1 | 1 | 80 | 137 | 215 | 1.36e-37 | 145 |
| Msa0936970 | MtrunA17_Chr2g0278761 | 71.951 | 82 | 21 | 1 | 1 | 80 | 155 | 236 | 4.64e-34 | 135 |
| Msa0936970 | MtrunA17_Chr4g0050591 | 71.951 | 82 | 21 | 1 | 1 | 80 | 154 | 235 | 6.91e-34 | 135 |
| Msa0936970 | MtrunA17_Chr1g0207281 | 69.412 | 85 | 21 | 1 | 1 | 80 | 154 | 238 | 1.21e-33 | 134 |
| Msa0936970 | MtrunA17_Chr5g0425531 | 64.368 | 87 | 24 | 2 | 1 | 80 | 152 | 238 | 1.31e-30 | 125 |
| Msa0936970 | MtrunA17_Chr5g0425471 | 64.368 | 87 | 24 | 2 | 1 | 80 | 150 | 236 | 1.38e-30 | 125 |
| Msa0936970 | MtrunA17_Chr5g0425431 | 63.218 | 87 | 25 | 2 | 1 | 80 | 148 | 234 | 1.56e-29 | 122 |
| Msa0936970 | MtrunA17_Chr5g0425451 | 62.069 | 87 | 26 | 2 | 1 | 80 | 150 | 236 | 8.60e-29 | 120 |
| Msa0936970 | MtrunA17_Chr3g0115601 | 62.791 | 86 | 26 | 3 | 1 | 80 | 144 | 229 | 1.62e-28 | 119 |
| Msa0936970 | MtrunA17_Chr5g0411571 | 53.846 | 91 | 31 | 1 | 1 | 80 | 142 | 232 | 6.91e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936970 | AT3G47800.1 | 54.144 | 362 | 144 | 7 | 86 | 446 | 16 | 356 | 4.18e-130 | 380 |
| Msa0936970 | AT5G15140.1 | 56.725 | 342 | 138 | 6 | 106 | 446 | 155 | 487 | 1.23e-125 | 374 |
| Msa0936970 | AT3G17940.1 | 48.204 | 334 | 168 | 4 | 115 | 446 | 10 | 340 | 3.77e-108 | 324 |
| Msa0936970 | AT3G01260.1 | 43.713 | 334 | 158 | 8 | 114 | 446 | 119 | 423 | 2.51e-78 | 250 |
| Msa0936970 | AT5G49360.1 | 86.250 | 80 | 11 | 0 | 1 | 80 | 149 | 228 | 7.26e-42 | 159 |
| Msa0936970 | AT1G02640.1 | 82.500 | 80 | 13 | 1 | 1 | 80 | 144 | 222 | 1.89e-38 | 149 |
| Msa0936970 | AT5G09730.1 | 76.829 | 82 | 17 | 1 | 1 | 80 | 149 | 230 | 1.01e-35 | 140 |
| Msa0936970 | AT5G64570.3 | 75.610 | 82 | 18 | 1 | 1 | 80 | 159 | 240 | 2.06e-35 | 139 |
| Msa0936970 | AT5G64570.2 | 75.610 | 82 | 18 | 1 | 1 | 80 | 1 | 82 | 4.05e-35 | 138 |
| Msa0936970 | AT5G64570.1 | 75.610 | 82 | 18 | 1 | 1 | 80 | 159 | 240 | 4.84e-35 | 139 |
| Msa0936970 | AT3G19620.1 | 71.084 | 83 | 21 | 1 | 1 | 80 | 141 | 223 | 3.99e-33 | 133 |
| Msa0936970 | AT1G78060.1 | 62.069 | 87 | 26 | 2 | 1 | 80 | 138 | 224 | 1.32e-29 | 122 |
| Msa0936970 | AT5G10560.1 | 48.515 | 101 | 31 | 1 | 1 | 80 | 142 | 242 | 1.70e-24 | 107 |
Find 95 sgRNAs with CRISPR-Local
Find 542 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTCTTCTTAGCAGCTTC+TGG | 0.181201 | 6_3:+7945217 | Msa0936970:CDS |
| ATTTAGTTAACCATGCTTAT+TGG | 0.207837 | 6_3:+7948667 | Msa0936970:CDS |
| AGAGAACAAAGAAGGATTAA+AGG | 0.218075 | 6_3:+7948914 | Msa0936970:CDS |
| AACAACATAACATGCTTATA+AGG | 0.235997 | 6_3:-7949155 | None:intergenic |
| GGAGCTAAGTTTACTCTAAA+TGG | 0.245263 | 6_3:+7946824 | Msa0936970:CDS |
| CTGCCTATGATCTTGATAAT+TGG | 0.246575 | 6_3:+7940590 | Msa0936970:CDS |
| GACAACCTTGAGCCGGTTTC+CGG | 0.255180 | 6_3:-7940548 | None:intergenic |
| ACAATAGTTGAAGGAAAATT+AGG | 0.263993 | 6_3:-7949119 | None:intergenic |
| TTACTGGTGTAGGTTTGTTT+AGG | 0.267070 | 6_3:-7948644 | None:intergenic |
| GAGGATTCAGTGATGTTCTT+TGG | 0.270041 | 6_3:+7947094 | Msa0936970:CDS |
| TACTGGTGTAGGTTTGTTTA+GGG | 0.287587 | 6_3:-7948643 | None:intergenic |
| TGTGGTAACTGAATTTGATT+AGG | 0.298603 | 6_3:-7947152 | None:intergenic |
| GCATGGTTAACTAAATTTAC+TGG | 0.313208 | 6_3:-7948660 | None:intergenic |
| CTAAAATGTTGCCACTGTTA+TGG | 0.321628 | 6_3:-7948701 | None:intergenic |
| TTGCTTGCATAATTATGGTT+AGG | 0.322053 | 6_3:-7948617 | None:intergenic |
| ATTAACTATGTGCTTAATAA+AGG | 0.334398 | 6_3:+7948885 | Msa0936970:CDS |
| GTAACAGTGAGCTACATTCT+AGG | 0.335336 | 6_3:+7948585 | Msa0936970:CDS |
| TTACTTTGAAGGTCACTAAC+TGG | 0.341785 | 6_3:+7945314 | Msa0936970:CDS |
| ACCACGTTCAGCACTTTGTT+TGG | 0.345777 | 6_3:+7949064 | Msa0936970:CDS |
| GACAATAACCTTATTCCAAC+TGG | 0.357944 | 6_3:+7948765 | Msa0936970:CDS |
| TTCCTAAAACCACAAATTGT+TGG | 0.359831 | 6_3:+7948822 | Msa0936970:CDS |
| TTAGGATGATTAACAGAATC+AGG | 0.363742 | 6_3:-7949101 | None:intergenic |
| GAAAGGTGATCTTACTTTGA+AGG | 0.369435 | 6_3:+7945303 | Msa0936970:CDS |
| GTTTCCATTACAGGATTTCC+TGG | 0.369437 | 6_3:+7948552 | Msa0936970:intron |
| ATAATTGGAATGGTGTAGAT+AGG | 0.369640 | 6_3:+7940605 | Msa0936970:CDS |
| CATTAGCAATTAATTTGTAA+TGG | 0.396328 | 6_3:-7946850 | None:intergenic |
| AAGTTGGGTGATATCGTTCT+TGG | 0.399770 | 6_3:+7945676 | Msa0936970:CDS |
| ATGTATAATGGTGGAGCTGC+AGG | 0.402570 | 6_3:+7940388 | Msa0936970:CDS |
| CAGAATGATACATCATACTT+TGG | 0.405258 | 6_3:+7946767 | Msa0936970:intron |
| AGACTTACAGTATATGCATT+TGG | 0.406961 | 6_3:-7945709 | None:intergenic |
| TGCTTGCATAATTATGGTTA+GGG | 0.408864 | 6_3:-7948616 | None:intergenic |
| GGAATAAGGTTATTGTCAAT+AGG | 0.410891 | 6_3:-7948759 | None:intergenic |
| AAGGCAACGGTGCCGGAAAC+CGG | 0.416364 | 6_3:+7940536 | Msa0936970:CDS |
| GGTAGGGTTGCTAATAGAAT+TGG | 0.416927 | 6_3:+7946800 | Msa0936970:CDS |
| ATTCTTGTACCAACAATTTG+TGG | 0.418307 | 6_3:-7948831 | None:intergenic |
| TACAAATTAATTGCTAATGA+AGG | 0.427010 | 6_3:+7946854 | Msa0936970:CDS |
| GCACTATAAAATTGCAATCC+AGG | 0.428333 | 6_3:-7948996 | None:intergenic |
| AACCATGCTTATTGGAACTT+AGG | 0.428402 | 6_3:+7948675 | Msa0936970:CDS |
| GATCTTCACCGGGTGTCTCT+TGG | 0.432250 | 6_3:-7940468 | None:intergenic |
| ATTCCAATTATCAAGATCAT+AGG | 0.432611 | 6_3:-7940593 | None:intergenic |
| GCAGCTTCTGGATTTGTCAA+TGG | 0.432964 | 6_3:+7945229 | Msa0936970:CDS |
| GTGGTAACTGAATTTGATTA+GGG | 0.433912 | 6_3:-7947151 | None:intergenic |
| TGTAGCTCACTGTTACTTTG+AGG | 0.450175 | 6_3:-7948578 | None:intergenic |
| ATAGTGATGGATAAGAAATC+AGG | 0.452035 | 6_3:+7948945 | Msa0936970:CDS |
| GTGAAGAATGATAAGGGAAA+AGG | 0.455139 | 6_3:+7949026 | Msa0936970:CDS |
| CAGTGATGTTCTTTGGAAAG+TGG | 0.458791 | 6_3:+7947101 | Msa0936970:CDS |
| TACGCCGCAGCCTATGTTCA+AGG | 0.465511 | 6_3:+7940508 | Msa0936970:CDS |
| AAGCTTAGTACTAATGCTCC+TGG | 0.469025 | 6_3:+7948978 | Msa0936970:CDS |
| CTTTGGAGCAACCGTTGGTA+GGG | 0.471024 | 6_3:+7946784 | Msa0936970:CDS |
| AAATTGTTTGAGCTTAAGAA+AGG | 0.475537 | 6_3:+7945286 | Msa0936970:CDS |
| ACATAGGAGCACAAATATCT+TGG | 0.476047 | 6_3:-7945194 | None:intergenic |
| CGTGATCCACGGTGGGGTCG+TGG | 0.477368 | 6_3:+7940445 | Msa0936970:CDS |
| ATGTATTTACCATTCTTGTC+AGG | 0.477494 | 6_3:-7945364 | None:intergenic |
| GCCTTGTAGTCCTTGAACAT+AGG | 0.479164 | 6_3:-7940518 | None:intergenic |
| TACTTTGAAGGTCACTAACT+GGG | 0.480765 | 6_3:+7945315 | Msa0936970:CDS |
| GGCCACGGTGTGATCTTCAC+CGG | 0.487830 | 6_3:-7940479 | None:intergenic |
| GGTGAAGATCACACCGTGGC+CGG | 0.497805 | 6_3:+7940481 | Msa0936970:CDS |
| GAAGCAAGAGCAATGTATAA+TGG | 0.501427 | 6_3:+7940376 | None:intergenic |
| GGAAAATTAGAGAACAAAGA+AGG | 0.503162 | 6_3:+7948906 | Msa0936970:CDS |
| TTAACTAAATTTACTGGTGT+AGG | 0.514196 | 6_3:-7948654 | None:intergenic |
| GGACTACAAGGCAACGGTGC+CGG | 0.521184 | 6_3:+7940529 | Msa0936970:CDS |
| CAATGGCTCAATCAATAAGA+AGG | 0.526350 | 6_3:+7945246 | Msa0936970:CDS |
| GCCTATGTTCAAGGACTACA+AGG | 0.528488 | 6_3:+7940517 | Msa0936970:CDS |
| CTAGTCCTTCCTGACAAGAA+TGG | 0.529641 | 6_3:+7945355 | Msa0936970:CDS |
| AAGAATGATAAGGGAAAAGG+AGG | 0.537569 | 6_3:+7949029 | Msa0936970:CDS |
| ACTTTGGAGCAACCGTTGGT+AGG | 0.537610 | 6_3:+7946783 | Msa0936970:CDS |
| TTCCTAAGTTCCAATAAGCA+TGG | 0.549621 | 6_3:-7948677 | None:intergenic |
| AGGGTTGCTAATAGAATTGG+AGG | 0.552833 | 6_3:+7946803 | Msa0936970:CDS |
| GAAGGAAACAACACTCTCCA+TGG | 0.553714 | 6_3:+7946872 | Msa0936970:CDS |
| GTGGAAAAGTATGTAAGAGA+AGG | 0.556236 | 6_3:+7947120 | Msa0936970:CDS |
| AACAAGCGACAACCTTGAGC+CGG | 0.574124 | 6_3:-7940555 | None:intergenic |
| ATTTACCATTCTTGTCAGGA+AGG | 0.581401 | 6_3:-7945360 | None:intergenic |
| ACTGTTACTTTGAGGTCACC+AGG | 0.582122 | 6_3:-7948570 | None:intergenic |
| TCATACTTTGGAGCAACCGT+TGG | 0.584784 | 6_3:+7946779 | Msa0936970:CDS |
| GCCACGGTGTGATCTTCACC+GGG | 0.586278 | 6_3:-7940478 | None:intergenic |
| CGGTGCCGGAAACCGGCTCA+AGG | 0.586515 | 6_3:+7940543 | Msa0936970:CDS |
| AAAGGTTGCAGCTATAGTGA+TGG | 0.595506 | 6_3:+7948932 | Msa0936970:CDS |
| TAGTCCTTGAACATAGGCTG+CGG | 0.601475 | 6_3:-7940512 | None:intergenic |
| AAAAGCATGTGGAACTTTGG+TGG | 0.603729 | 6_3:-7949186 | None:intergenic |
| TTATAATTAGGTGGAACTAG+AGG | 0.607356 | 6_3:+7947075 | Msa0936970:intron |
| CTGCTAAGAAGAGAAGACAT+AGG | 0.607738 | 6_3:-7945210 | None:intergenic |
| GCAAGAGCAATGTATAATGG+TGG | 0.623715 | 6_3:+7940379 | None:intergenic |
| TATGATCTTGATAATTGGAA+TGG | 0.629066 | 6_3:+7940595 | Msa0936970:CDS |
| GGTCGTGGCCAAGAGACACC+CGG | 0.634579 | 6_3:+7940460 | Msa0936970:CDS |
| TCTATTAGCAACCCTACCAA+CGG | 0.645731 | 6_3:-7946795 | None:intergenic |
| TGTATAATGGTGGAGCTGCA+GGG | 0.656307 | 6_3:+7940389 | Msa0936970:CDS |
| ACTTTGAAGGTCACTAACTG+GGG | 0.657814 | 6_3:+7945316 | Msa0936970:CDS |
| CTTCTTCACCATCAAAACTG+TGG | 0.659531 | 6_3:-7947170 | None:intergenic |
| TCCAAACAAAGTGCTGAACG+TGG | 0.666017 | 6_3:-7949065 | None:intergenic |
| GTTCAAGGACTACAAGGCAA+CGG | 0.678427 | 6_3:+7940523 | Msa0936970:CDS |
| TCTTGGCCACGACCCCACCG+TGG | 0.699577 | 6_3:-7940451 | None:intergenic |
| AGAATGATAAGGGAAAAGGA+GGG | 0.703237 | 6_3:+7949030 | Msa0936970:CDS |
| AACTTAGGAAACCATAACAG+TGG | 0.715250 | 6_3:+7948690 | Msa0936970:CDS |
| TGGTAACTGAATTTGATTAG+GGG | 0.732880 | 6_3:-7947150 | None:intergenic |
| ACCCGGTGAAGATCACACCG+TGG | 0.802157 | 6_3:+7940477 | Msa0936970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTATATATTTTTTGTT+TGG | + | chr6_3:7943226-7943245 | Msa0936970:intron | 10.0% |
| !! | GATGTAATTTAAAAATAATA+GGG | + | chr6_3:7943271-7943290 | Msa0936970:intron | 10.0% |
| !! | TAGATAATTAAAGATATTAA+CGG | + | chr6_3:7944575-7944594 | Msa0936970:intron | 10.0% |
| !! | TAAATATTTAATTAAGTAGA+TGG | + | chr6_3:7945636-7945655 | Msa0936970:intron | 10.0% |
| !! | ATAATTATACTTGTTTAATA+AGG | + | chr6_3:7946713-7946732 | Msa0936970:intron | 10.0% |
| !!! | CTCTTAATTTTTTTATAATT+AGG | + | chr6_3:7947063-7947082 | Msa0936970:intron | 10.0% |
| !!! | TTAATTTTTTTATAATTAGG+TGG | + | chr6_3:7947066-7947085 | Msa0936970:intron | 10.0% |
| !!! | TTTGTTTCAAATATATTTTA+TGG | - | chr6_3:7948103-7948122 | None:intergenic | 10.0% |
| !! | GCAACAAAAAAAAAATTAAA+TGG | - | chr6_3:7940709-7940728 | None:intergenic | 15.0% |
| !!! | TATGATGATTTTTATTAAAG+TGG | + | chr6_3:7941002-7941021 | Msa0936970:intron | 15.0% |
| !! | TGTGTAACATATTAATTTAT+AGG | + | chr6_3:7941367-7941386 | Msa0936970:intron | 15.0% |
| !! | TAAATTCATAAGTATCTAAA+AGG | - | chr6_3:7941678-7941697 | None:intergenic | 15.0% |
| !! | AAAAGAATATGTATTCTTTA+TGG | + | chr6_3:7942810-7942829 | Msa0936970:intron | 15.0% |
| !! | GGATGTAATTTAAAAATAAT+AGG | + | chr6_3:7943270-7943289 | Msa0936970:intron | 15.0% |
| !! | TCTAAAAATAGCATAAAATA+AGG | + | chr6_3:7943376-7943395 | Msa0936970:intron | 15.0% |
| !! | TCTAAAAATAGCATAAAATA+AGG | + | chr6_3:7943376-7943395 | Msa0936970:intron | 15.0% |
| !! | AGAGTAATTAAATAAGAATA+TGG | + | chr6_3:7943888-7943907 | Msa0936970:intron | 15.0% |
| !! | TAATTAAATAAGAATATGGA+GGG | + | chr6_3:7943892-7943911 | Msa0936970:intron | 15.0% |
| !!! | TTTAGTCCATAATATTTTTA+AGG | - | chr6_3:7943953-7943972 | None:intergenic | 15.0% |
| !!! | TTCCATTCATTATTTTTTAT+TGG | + | chr6_3:7944092-7944111 | Msa0936970:intron | 15.0% |
| !!! | GTTATCGTTATAATTTTAAA+TGG | + | chr6_3:7944332-7944351 | Msa0936970:intron | 15.0% |
| !! | TATACATTAGTTAAAAAGTA+TGG | - | chr6_3:7944471-7944490 | None:intergenic | 15.0% |
| !! | CGTTTAACAAATATTATAAT+TGG | - | chr6_3:7944716-7944735 | None:intergenic | 15.0% |
| !!! | CTATATTTTGTCTTTATTTT+TGG | + | chr6_3:7944892-7944911 | Msa0936970:intron | 15.0% |
| !! | TTATATATATTGAAGGATAT+AGG | - | chr6_3:7945098-7945117 | None:intergenic | 15.0% |
| !! | TTAAAATGTAAACATATTCA+AGG | - | chr6_3:7945750-7945769 | None:intergenic | 15.0% |
| !!! | TCTAAAATAAAAGACAATTT+TGG | - | chr6_3:7945896-7945915 | None:intergenic | 15.0% |
| !! | TATATGTTTAGTATTACAAA+AGG | + | chr6_3:7946069-7946088 | Msa0936970:intron | 15.0% |
| !!! | TTATACATCGAATATTTTTT+TGG | + | chr6_3:7946427-7946446 | Msa0936970:intron | 15.0% |
| !!! | TATACATCGAATATTTTTTT+GGG | + | chr6_3:7946428-7946447 | Msa0936970:intron | 15.0% |
| !!! | GTAGTTATAATATTTTACTT+TGG | + | chr6_3:7946685-7946704 | Msa0936970:intron | 15.0% |
| !! | TCATGACATAAAATTATAAT+TGG | + | chr6_3:7946898-7946917 | Msa0936970:intron | 15.0% |
| !! | TAAGAAATTGCAAAAAATTT+GGG | - | chr6_3:7947713-7947732 | None:intergenic | 15.0% |
| !! | ATAAGAAATTGCAAAAAATT+TGG | - | chr6_3:7947714-7947733 | None:intergenic | 15.0% |
| !! | AAGAAATTGTCAAATTTATA+GGG | - | chr6_3:7947766-7947785 | None:intergenic | 15.0% |
| !! | AAAGAAATTGTCAAATTTAT+AGG | - | chr6_3:7947767-7947786 | None:intergenic | 15.0% |
| !! | TCAATTATACCATACTTATA+AGG | + | chr6_3:7940679-7940698 | Msa0936970:intron | 20.0% |
| !! | CAATTATACCATACTTATAA+GGG | + | chr6_3:7940680-7940699 | Msa0936970:intron | 20.0% |
| !! | AATTATACCATACTTATAAG+GGG | + | chr6_3:7940681-7940700 | Msa0936970:intron | 20.0% |
| !! | ATTAAAGTTACATCAACAAA+GGG | - | chr6_3:7941177-7941196 | None:intergenic | 20.0% |
| !! | AATTAAAGTTACATCAACAA+AGG | - | chr6_3:7941178-7941197 | None:intergenic | 20.0% |
| !!! | TTAAGAAAATCAATTTGCTT+CGG | + | chr6_3:7941269-7941288 | Msa0936970:intron | 20.0% |
| !! | ATATTCTTGTTCTTTATAAC+TGG | - | chr6_3:7941296-7941315 | None:intergenic | 20.0% |
| !! | TATGAATTTACAAACCATAA+TGG | + | chr6_3:7941688-7941707 | Msa0936970:intron | 20.0% |
| !!! | TAAACAAAAGATACATGTTT+TGG | - | chr6_3:7941727-7941746 | None:intergenic | 20.0% |
| !! | TACAAAATGACATAAAGAAT+TGG | - | chr6_3:7941958-7941977 | None:intergenic | 20.0% |
| !! | AATTTGAATATGATAAAGAG+AGG | + | chr6_3:7942690-7942709 | Msa0936970:intron | 20.0% |
| !! | ATTTGATTAAGTGTTATATC+TGG | + | chr6_3:7942723-7942742 | Msa0936970:intron | 20.0% |
| !! | AATAAAACATTTGACATTTG+AGG | + | chr6_3:7942780-7942799 | Msa0936970:intron | 20.0% |
| !! | ATAAAACATTTGACATTTGA+GGG | + | chr6_3:7942781-7942800 | Msa0936970:intron | 20.0% |
| !! | GTAATTAAATAAGAATATGG+AGG | + | chr6_3:7943891-7943910 | Msa0936970:intron | 20.0% |
| !! | AAGCTTCCTTAAAAATATTA+TGG | + | chr6_3:7943944-7943963 | Msa0936970:intron | 20.0% |
| !!! | ATGGACTAAAATTACTATTA+CGG | + | chr6_3:7943963-7943982 | Msa0936970:intron | 20.0% |
| !! | AAAAAATAATGAATGGAATG+AGG | - | chr6_3:7944090-7944109 | None:intergenic | 20.0% |
| !! | AATTATAACGATAACTAACA+TGG | - | chr6_3:7944327-7944346 | None:intergenic | 20.0% |
| !!! | ATTTTTATCCAATGTTACAT+TGG | - | chr6_3:7944854-7944873 | None:intergenic | 20.0% |
| !! | ATAAATGAAGCAACAATTAA+TGG | - | chr6_3:7945432-7945451 | None:intergenic | 20.0% |
| !!! | CTTAATTATTTTTTCCTCAT+TGG | + | chr6_3:7946568-7946587 | Msa0936970:intron | 20.0% |
| !!! | CATTAGCAATTAATTTGTAA+TGG | - | chr6_3:7946853-7946872 | None:intergenic | 20.0% |
| !! | TACAAATTAATTGCTAATGA+AGG | + | chr6_3:7946854-7946873 | Msa0936970:CDS | 20.0% |
| !! | TGAATTATTGTAGTTATTGT+GGG | - | chr6_3:7946955-7946974 | None:intergenic | 20.0% |
| !!! | CAATTTTTAAATTGTTTGTG+TGG | - | chr6_3:7946990-7947009 | None:intergenic | 20.0% |
| !! | CACACAAACAATTTAAAAAT+TGG | + | chr6_3:7946988-7947007 | Msa0936970:intron | 20.0% |
| !!! | AATTGGTTCATAGATTAATT+TGG | + | chr6_3:7947005-7947024 | Msa0936970:intron | 20.0% |
| !! | AATATTGCAGTACTATAATT+TGG | + | chr6_3:7947234-7947253 | Msa0936970:intron | 20.0% |
| !! | AGAAATTGTCAAATTTATAG+GGG | - | chr6_3:7947765-7947784 | None:intergenic | 20.0% |
| !! | AAATTTGCAACACATTTATA+GGG | - | chr6_3:7947828-7947847 | None:intergenic | 20.0% |
| !! | AAAATTTGCAACACATTTAT+AGG | - | chr6_3:7947829-7947848 | None:intergenic | 20.0% |
| !! | CCAAAATTATTATAAAGTCT+GGG | - | chr6_3:7947861-7947880 | None:intergenic | 20.0% |
| !! | TTAGTTAAAACAATGTGTAT+TGG | - | chr6_3:7948304-7948323 | None:intergenic | 20.0% |
| !! | ATATATAGAAAAAGAGGTAA+AGG | - | chr6_3:7948468-7948487 | None:intergenic | 20.0% |
| !! | GAGAAAATATATAGAAAAAG+AGG | - | chr6_3:7948474-7948493 | None:intergenic | 20.0% |
| !! | TTCTACTTTATCAATATCAA+AGG | - | chr6_3:7948496-7948515 | None:intergenic | 20.0% |
| !! | ATTAACTATGTGCTTAATAA+AGG | + | chr6_3:7948885-7948904 | Msa0936970:CDS | 20.0% |
| !!! | AAATTTTGTGAAGAATGATA+AGG | + | chr6_3:7949019-7949038 | Msa0936970:CDS | 20.0% |
| !!! | AATTTTGTGAAGAATGATAA+GGG | + | chr6_3:7949020-7949039 | Msa0936970:CDS | 20.0% |
| ! | TCACGAAAAATATTCACATT+AGG | - | chr6_3:7940430-7940449 | None:intergenic | 25.0% |
| ! | ATTCCAATTATCAAGATCAT+AGG | - | chr6_3:7940596-7940615 | None:intergenic | 25.0% |
| !! | TATGATCTTGATAATTGGAA+TGG | + | chr6_3:7940595-7940614 | Msa0936970:CDS | 25.0% |
| ! | ATTATACCATACTTATAAGG+GGG | + | chr6_3:7940682-7940701 | Msa0936970:intron | 25.0% |
| !! | TAAATCAACCAATTTTGGAT+GGG | - | chr6_3:7940767-7940786 | None:intergenic | 25.0% |
| !! | ATAAATCAACCAATTTTGGA+TGG | - | chr6_3:7940768-7940787 | None:intergenic | 25.0% |
| ! | ATATTATACCAACCAAAGTA+TGG | + | chr6_3:7940901-7940920 | Msa0936970:intron | 25.0% |
| ! | TAGTTTCCATAAATACAAGA+TGG | + | chr6_3:7940969-7940988 | Msa0936970:intron | 25.0% |
| ! | AGTTTCCATAAATACAAGAT+GGG | + | chr6_3:7940970-7940989 | Msa0936970:intron | 25.0% |
| !! | TTGTTGTTGATAAAGACTTT+AGG | + | chr6_3:7941037-7941056 | Msa0936970:intron | 25.0% |
| ! | CAATGATGTAGAAAACAAAA+TGG | - | chr6_3:7941144-7941163 | None:intergenic | 25.0% |
| ! | TTAAAGTTACATCAACAAAG+GGG | - | chr6_3:7941176-7941195 | None:intergenic | 25.0% |
| ! | GATAGAATTAAAAACACAAG+GGG | - | chr6_3:7941656-7941675 | None:intergenic | 25.0% |
| ! | GGATAGAATTAAAAACACAA+GGG | - | chr6_3:7941657-7941676 | None:intergenic | 25.0% |
| ! | AGGATAGAATTAAAAACACA+AGG | - | chr6_3:7941658-7941677 | None:intergenic | 25.0% |
| ! | GAAGTAATGATATTCCATTA+TGG | - | chr6_3:7941705-7941724 | None:intergenic | 25.0% |
| !! | ATTTTGTACCATTCAACTAA+AGG | + | chr6_3:7941970-7941989 | Msa0936970:intron | 25.0% |
| !!! | ATCTAAAAGTGTCAATCTTA+AGG | - | chr6_3:7942516-7942535 | None:intergenic | 25.0% |
| ! | ACACTTAATCAAATTTGTCA+AGG | - | chr6_3:7942717-7942736 | None:intergenic | 25.0% |
| ! | TAAAACATTTGACATTTGAG+GGG | + | chr6_3:7942782-7942801 | Msa0936970:intron | 25.0% |
| ! | TTCCAATTTGTATGGAAAAT+TGG | + | chr6_3:7943033-7943052 | Msa0936970:intron | 25.0% |
| ! | AAATTGGAGAAAAAAAACCA+AGG | + | chr6_3:7943049-7943068 | Msa0936970:intron | 25.0% |
| !!! | TTTCTGAAAGTGCTAATAAA+AGG | + | chr6_3:7943309-7943328 | Msa0936970:intron | 25.0% |
| !!! | TTCTGAAAGTGCTAATAAAA+GGG | + | chr6_3:7943310-7943329 | Msa0936970:intron | 25.0% |
| !! | CCAAAATAAGTGCTATTAAA+GGG | + | chr6_3:7943630-7943649 | Msa0936970:intron | 25.0% |
| !! | CAAAATAAGTGCTATTAAAG+GGG | + | chr6_3:7943631-7943650 | Msa0936970:intron | 25.0% |
| !! | AAAATAAGTGCTATTAAAGG+GGG | + | chr6_3:7943632-7943651 | Msa0936970:intron | 25.0% |
| !! | AAACAATAGTTTCAAGTAAC+TGG | + | chr6_3:7943686-7943705 | Msa0936970:intron | 25.0% |
| ! | AAAAATGACATATTGTAGCA+AGG | + | chr6_3:7943714-7943733 | Msa0936970:intron | 25.0% |
| ! | ATATCGTAACTGTTGAAATA+AGG | + | chr6_3:7943771-7943790 | Msa0936970:intron | 25.0% |
| ! | TATCGTAACTGTTGAAATAA+GGG | + | chr6_3:7943772-7943791 | Msa0936970:intron | 25.0% |
| ! | GCATGACTTATATATTAACA+TGG | + | chr6_3:7943806-7943825 | Msa0936970:intron | 25.0% |
| ! | TGGACTAAAATTACTATTAC+GGG | + | chr6_3:7943964-7943983 | Msa0936970:intron | 25.0% |
| ! | ACTATCATATTGTGTTAGAT+AGG | - | chr6_3:7944025-7944044 | None:intergenic | 25.0% |
| ! | GGCCAATAAAAAATAATGAA+TGG | - | chr6_3:7944097-7944116 | None:intergenic | 25.0% |
| !! | TCTTTAGAAGTAGAAGTTTA+CGG | - | chr6_3:7944303-7944322 | None:intergenic | 25.0% |
| !!! | ATTGGACATGTATTTTGAAA+CGG | - | chr6_3:7944412-7944431 | None:intergenic | 25.0% |
| ! | ATAGTGTACATTGCAAAAAT+TGG | - | chr6_3:7944430-7944449 | None:intergenic | 25.0% |
| !!! | TGTGCTATAATTTTTTCATG+TGG | + | chr6_3:7944686-7944705 | Msa0936970:intron | 25.0% |
| !! | TTATTTGAAACTCTATGATG+CGG | - | chr6_3:7944806-7944825 | None:intergenic | 25.0% |
| ! | TCAAATTCATTAATTGACCT+AGG | + | chr6_3:7944924-7944943 | Msa0936970:intron | 25.0% |
| !!! | GTGGGTTTTATATATATTGA+AGG | - | chr6_3:7945105-7945124 | None:intergenic | 25.0% |
| ! | AAATTGTTTGAGCTTAAGAA+AGG | + | chr6_3:7945286-7945305 | Msa0936970:CDS | 25.0% |
| !!! | TTTTTTGCTAATAGTCGATT+CGG | + | chr6_3:7945559-7945578 | Msa0936970:intron | 25.0% |
| !!! | TAGATGGATTAATTTTTCTC+AGG | + | chr6_3:7945652-7945671 | Msa0936970:intron | 25.0% |
| !! | TTAATTTTTCTCAGGAAAGT+TGG | + | chr6_3:7945660-7945679 | Msa0936970:intron | 25.0% |
| !! | TAATTTTTCTCAGGAAAGTT+GGG | + | chr6_3:7945661-7945680 | Msa0936970:intron | 25.0% |
| ! | TTGACATTTAGTTAGAGAAA+AGG | + | chr6_3:7945793-7945812 | Msa0936970:intron | 25.0% |
| !! | ACACATATTTTCTTCTTAGA+CGG | + | chr6_3:7945827-7945846 | Msa0936970:intron | 25.0% |
| ! | TCACACTTTAAGTATATGTT+GGG | - | chr6_3:7946231-7946250 | None:intergenic | 25.0% |
| ! | ATCACACTTTAAGTATATGT+TGG | - | chr6_3:7946232-7946251 | None:intergenic | 25.0% |
| !!! | ATCGAATATTTTTTTGGGTT+TGG | + | chr6_3:7946433-7946452 | Msa0936970:intron | 25.0% |
| !! | CGAATATTTTATGTTTGCTT+TGG | + | chr6_3:7946466-7946485 | Msa0936970:intron | 25.0% |
| ! | CTTCAAACAAGTAAAACTAA+AGG | - | chr6_3:7946517-7946536 | None:intergenic | 25.0% |
| !!! | AGGTTCCACAAATTTTTTAT+AGG | + | chr6_3:7946612-7946631 | Msa0936970:intron | 25.0% |
| ! | AGGTACCTATAAAAAATTTG+TGG | - | chr6_3:7946620-7946639 | None:intergenic | 25.0% |
| ! | CTGAATTATTGTAGTTATTG+TGG | - | chr6_3:7946956-7946975 | None:intergenic | 25.0% |
| ! | TTACTATATATGATGAGATG+TGG | - | chr6_3:7947035-7947054 | None:intergenic | 25.0% |
| ! | TTATAGTACTGCAATATTGA+AGG | - | chr6_3:7947232-7947251 | None:intergenic | 25.0% |
| ! | GTTTATTTAAGAAATTCAGG+GGG | - | chr6_3:7947743-7947762 | None:intergenic | 25.0% |
| ! | GGTTTATTTAAGAAATTCAG+GGG | - | chr6_3:7947744-7947763 | None:intergenic | 25.0% |
| ! | GGGTTTATTTAAGAAATTCA+GGG | - | chr6_3:7947745-7947764 | None:intergenic | 25.0% |
| ! | AATTTGCAACACATTTATAG+GGG | - | chr6_3:7947827-7947846 | None:intergenic | 25.0% |
| !! | CCCAGACTTTATAATAATTT+TGG | + | chr6_3:7947858-7947877 | Msa0936970:intron | 25.0% |
| ! | GCCAAAATTATTATAAAGTC+TGG | - | chr6_3:7947862-7947881 | None:intergenic | 25.0% |
| !! | ATTGAAGATCAGAGTTTTTA+GGG | - | chr6_3:7947985-7948004 | None:intergenic | 25.0% |
| !! | TATTGAAGATCAGAGTTTTT+AGG | - | chr6_3:7947986-7948005 | None:intergenic | 25.0% |
| !! | ATATTTGAAACAAATCTTCC+TGG | + | chr6_3:7948109-7948128 | Msa0936970:intron | 25.0% |
| ! | TATGTATATAGTATGCTTCA+AGG | - | chr6_3:7948140-7948159 | None:intergenic | 25.0% |
| !! | TATGTTGTTCTTTTGAATGT+TGG | - | chr6_3:7948337-7948356 | None:intergenic | 25.0% |
| ! | ATAGTATATGTTTCCATTAC+AGG | + | chr6_3:7948543-7948562 | Msa0936970:intron | 25.0% |
| ! | TTAACTAAATTTACTGGTGT+AGG | - | chr6_3:7948657-7948676 | None:intergenic | 25.0% |
| ! | ATTTAGTTAACCATGCTTAT+TGG | + | chr6_3:7948667-7948686 | Msa0936970:CDS | 25.0% |
| !! | GATGAAGTTGTTCAAATTTT+TGG | + | chr6_3:7948723-7948742 | Msa0936970:CDS | 25.0% |
| !! | AAAATTTTCCAGTTGGAATA+AGG | - | chr6_3:7948776-7948795 | None:intergenic | 25.0% |
| ! | AACCAATTACCAAAAACAAA+TGG | + | chr6_3:7948855-7948874 | Msa0936970:CDS | 25.0% |
| !!! | AACCATTTGTTTTTGGTAAT+TGG | - | chr6_3:7948860-7948879 | None:intergenic | 25.0% |
| !!! | ATGTCATAACCATTTGTTTT+TGG | - | chr6_3:7948867-7948886 | None:intergenic | 25.0% |
| ! | ACAATAGTTGAAGGAAAATT+AGG | - | chr6_3:7949122-7949141 | None:intergenic | 25.0% |
| !! | TCTTTTGTAACAATAGTTGA+AGG | - | chr6_3:7949131-7949150 | None:intergenic | 25.0% |
| ! | AACAACATAACATGCTTATA+AGG | - | chr6_3:7949158-7949177 | None:intergenic | 25.0% |
| ! | TGAATATTTTTCGTGATCCA+CGG | + | chr6_3:7940434-7940453 | Msa0936970:CDS | 30.0% |
| ATAATTGGAATGGTGTAGAT+AGG | + | chr6_3:7940605-7940624 | Msa0936970:CDS | 30.0% | |
| ATATTAGGTCATACATACCT+TGG | - | chr6_3:7940644-7940663 | None:intergenic | 30.0% | |
| TTATACCATACTTATAAGGG+GGG | + | chr6_3:7940683-7940702 | Msa0936970:intron | 30.0% | |
| AAATTTCACCCATCCAAAAT+TGG | + | chr6_3:7940756-7940775 | Msa0936970:intron | 30.0% | |
| ! | GCTCATAAATCAACCAATTT+TGG | - | chr6_3:7940772-7940791 | None:intergenic | 30.0% |
| AATAAACTACCTACCACTTT+GGG | - | chr6_3:7940794-7940813 | None:intergenic | 30.0% | |
| TAATAAACTACCTACCACTT+TGG | - | chr6_3:7940795-7940814 | None:intergenic | 30.0% | |
| AACTAGTAACCACTCAAATA+TGG | - | chr6_3:7940863-7940882 | None:intergenic | 30.0% | |
| CAAATAATACGTCCATACTT+TGG | - | chr6_3:7940916-7940935 | None:intergenic | 30.0% | |
| ! | CTTTTGCATTCTATTTGTTC+TGG | + | chr6_3:7940936-7940955 | Msa0936970:intron | 30.0% |
| TTCTTCCCATCTTGTATTTA+TGG | - | chr6_3:7940978-7940997 | None:intergenic | 30.0% | |
| AATCAATTATGCAATGCAAG+TGG | - | chr6_3:7941063-7941082 | None:intergenic | 30.0% | |
| CTTGCATTGCATAATTGATT+CGG | + | chr6_3:7941063-7941082 | Msa0936970:intron | 30.0% | |
| ATGATGCAGAAGTTGTAATT+TGG | - | chr6_3:7941118-7941137 | None:intergenic | 30.0% | |
| TAAAGTTACATCAACAAAGG+GGG | - | chr6_3:7941175-7941194 | None:intergenic | 30.0% | |
| TTGTCTTCTGATGTAACTTT+AGG | + | chr6_3:7941213-7941232 | Msa0936970:intron | 30.0% | |
| AGCATATAGATGGCATTAAA+AGG | - | chr6_3:7941462-7941481 | None:intergenic | 30.0% | |
| TTAATGCCATCTATATGCTA+CGG | + | chr6_3:7941463-7941482 | Msa0936970:intron | 30.0% | |
| ATCTCTTTGATCTAACAAGT+GGG | - | chr6_3:7941581-7941600 | None:intergenic | 30.0% | |
| ! | TAATTTGAGACATAACCACA+AGG | - | chr6_3:7941768-7941787 | None:intergenic | 30.0% |
| ! | TTTTACCACTAGTCAAGATA+GGG | - | chr6_3:7941891-7941910 | None:intergenic | 30.0% |
| ! | TTTTTACCACTAGTCAAGAT+AGG | - | chr6_3:7941892-7941911 | None:intergenic | 30.0% |
| AGTGGTAAAAACATGTTTGT+TGG | + | chr6_3:7941901-7941920 | Msa0936970:intron | 30.0% | |
| ATTGACCACATTGTACAAAA+GGG | - | chr6_3:7942140-7942159 | None:intergenic | 30.0% | |
| ACAGCAGCAAATTCAAAATT+CGG | - | chr6_3:7942164-7942183 | None:intergenic | 30.0% | |
| !! | GCTGTAATTGAAGTTTGTTT+TGG | + | chr6_3:7942179-7942198 | Msa0936970:intron | 30.0% |
| !!! | GTTTTTTGCTGCATATATAG+TGG | + | chr6_3:7942235-7942254 | Msa0936970:intron | 30.0% |
| AACTGAATGAAGAACTATAC+AGG | - | chr6_3:7942264-7942283 | None:intergenic | 30.0% | |
| ATCCACTTCTATCAAACTAT+AGG | - | chr6_3:7942329-7942348 | None:intergenic | 30.0% | |
| TATAGTTTGATAGAAGTGGA+TGG | + | chr6_3:7942328-7942347 | Msa0936970:intron | 30.0% | |
| TATGTTATGTGTAGACAAAG+TGG | - | chr6_3:7942384-7942403 | None:intergenic | 30.0% | |
| ! | GTGACTAAGTTTTTCACAAT+TGG | + | chr6_3:7942595-7942614 | Msa0936970:intron | 30.0% |
| ! | TGACAAATCCTCTTTTTCTT+AGG | - | chr6_3:7942632-7942651 | None:intergenic | 30.0% |
| AAAACATTTGACATTTGAGG+GGG | + | chr6_3:7942783-7942802 | Msa0936970:intron | 30.0% | |
| AATCCAAAAACTCTCCATAA+GGG | - | chr6_3:7942857-7942876 | None:intergenic | 30.0% | |
| AAATCCAAAAACTCTCCATA+AGG | - | chr6_3:7942858-7942877 | None:intergenic | 30.0% | |
| ! | CTCCAATTTTCCATACAAAT+TGG | - | chr6_3:7943038-7943057 | None:intergenic | 30.0% |
| TAAAGCAACTAACAAAACCT+TGG | - | chr6_3:7943069-7943088 | None:intergenic | 30.0% | |
| !!! | AAGGTTTTGTTAGTTGCTTT+AGG | + | chr6_3:7943068-7943087 | Msa0936970:intron | 30.0% |
| !! | TCTGAAAGTGCTAATAAAAG+GGG | + | chr6_3:7943311-7943330 | Msa0936970:intron | 30.0% |
| !! | TTTCTGAAAGCGCTAATAAA+AGG | + | chr6_3:7943412-7943431 | Msa0936970:intron | 30.0% |
| !! | TTCTGAAAGCGCTAATAAAA+GGG | + | chr6_3:7943413-7943432 | Msa0936970:intron | 30.0% |
| CATAGCTATTTAATAGCGTT+TGG | + | chr6_3:7943536-7943555 | Msa0936970:intron | 30.0% | |
| ! | GCCAAAATAAGTGCTATTAA+AGG | + | chr6_3:7943629-7943648 | Msa0936970:intron | 30.0% |
| ! | CCCTTTAATAGCACTTATTT+TGG | - | chr6_3:7943633-7943652 | None:intergenic | 30.0% |
| !!! | AAGGGTTTGAGAGTTTTTTA+GGG | + | chr6_3:7943745-7943764 | Msa0936970:intron | 30.0% |
| CACAAAAAGAACAACTAGAT+AGG | + | chr6_3:7944050-7944069 | Msa0936970:intron | 30.0% | |
| ! | TTTTATTGGCCACAAATTCA+AGG | + | chr6_3:7944106-7944125 | Msa0936970:intron | 30.0% |
| !! | CTTGGACATGTATTTTGAAA+CGG | + | chr6_3:7944633-7944652 | Msa0936970:intron | 30.0% |
| CTAATACATAGTGTCAAGTT+GGG | - | chr6_3:7944984-7945003 | None:intergenic | 30.0% | |
| ! | AACTTTGAGAAAAGTCAATG+TGG | - | chr6_3:7945063-7945082 | None:intergenic | 30.0% |
| TCATGCAAAGATATTAAGAG+TGG | - | chr6_3:7945134-7945153 | None:intergenic | 30.0% | |
| ATGTATTTACCATTCTTGTC+AGG | - | chr6_3:7945367-7945386 | None:intergenic | 30.0% | |
| TTGAACTAGTTCAACAATCT+TGG | + | chr6_3:7945468-7945487 | Msa0936970:intron | 30.0% | |
| AGACTTACAGTATATGCATT+TGG | - | chr6_3:7945712-7945731 | None:intergenic | 30.0% | |
| GTCTAAGAAGAAAATATGTG+TGG | - | chr6_3:7945828-7945847 | None:intergenic | 30.0% | |
| !!! | GTTATGTAAGCTAGTTTTGT+AGG | - | chr6_3:7945948-7945967 | None:intergenic | 30.0% |
| GAAGATGAGTGAAGAATTAT+AGG | - | chr6_3:7946043-7946062 | None:intergenic | 30.0% | |
| !! | TAGTTTTTGGAAAATCACGA+TGG | - | chr6_3:7946115-7946134 | None:intergenic | 30.0% |
| ! | TAGCTACAAAGTGTAGTTTT+TGG | - | chr6_3:7946128-7946147 | None:intergenic | 30.0% |
| !! | TGTATGTGATTCTTGCTATT+AGG | + | chr6_3:7946251-7946270 | Msa0936970:intron | 30.0% |
| ATAAGAATAGCATACACAAG+TGG | - | chr6_3:7946411-7946430 | None:intergenic | 30.0% | |
| AAAAACTTACACAGTTTACC+TGG | - | chr6_3:7946541-7946560 | None:intergenic | 30.0% | |
| TCAACTTGAGATGACAAATT+AGG | + | chr6_3:7946592-7946611 | Msa0936970:intron | 30.0% | |
| CAGAATGATACATCATACTT+TGG | + | chr6_3:7946767-7946786 | Msa0936970:intron | 30.0% | |
| ! | ATTTTATGTCATGAGTACCA+TGG | - | chr6_3:7946892-7946911 | None:intergenic | 30.0% |
| TTATAATTAGGTGGAACTAG+AGG | + | chr6_3:7947075-7947094 | Msa0936970:intron | 30.0% | |
| TGGTAACTGAATTTGATTAG+GGG | - | chr6_3:7947153-7947172 | None:intergenic | 30.0% | |
| GTGGTAACTGAATTTGATTA+GGG | - | chr6_3:7947154-7947173 | None:intergenic | 30.0% | |
| TGTGGTAACTGAATTTGATT+AGG | - | chr6_3:7947155-7947174 | None:intergenic | 30.0% | |
| AGATGTTAGACACAATGTTT+GGG | + | chr6_3:7947302-7947321 | Msa0936970:intron | 30.0% | |
| TAAAAGAGAACACAGAGAAT+TGG | + | chr6_3:7947384-7947403 | Msa0936970:intron | 30.0% | |
| TCCACTCTCAATAGTAATAT+TGG | + | chr6_3:7947464-7947483 | Msa0936970:intron | 30.0% | |
| ACCAATATTACTATTGAGAG+TGG | - | chr6_3:7947468-7947487 | None:intergenic | 30.0% | |
| ! | AGGTTGATTCATATAAGACT+AGG | - | chr6_3:7947492-7947511 | None:intergenic | 30.0% |
| AGAGAGGTTTCTCATATTTA+GGG | - | chr6_3:7947567-7947586 | None:intergenic | 30.0% | |
| ATGAATTACAACTCAAACAG+TGG | + | chr6_3:7947643-7947662 | Msa0936970:intron | 30.0% | |
| AAATTGCAAAAAATTTGGGC+CGG | - | chr6_3:7947709-7947728 | None:intergenic | 30.0% | |
| GGGGTTTATTTAAGAAATTC+AGG | - | chr6_3:7947746-7947765 | None:intergenic | 30.0% | |
| ATTATCAAAAGGCTTAGAGT+TGG | - | chr6_3:7947912-7947931 | None:intergenic | 30.0% | |
| !! | CTAAGCCTTTTGATAATCAA+TGG | + | chr6_3:7947915-7947934 | Msa0936970:intron | 30.0% |
| ! | TTGTTCTTTTGAATGTTGGT+TGG | - | chr6_3:7948333-7948352 | None:intergenic | 30.0% |
| TGCTTGCATAATTATGGTTA+GGG | - | chr6_3:7948619-7948638 | None:intergenic | 30.0% | |
| TTGCTTGCATAATTATGGTT+AGG | - | chr6_3:7948620-7948639 | None:intergenic | 30.0% | |
| GCATGGTTAACTAAATTTAC+TGG | - | chr6_3:7948663-7948682 | None:intergenic | 30.0% | |
| GGAATAAGGTTATTGTCAAT+AGG | - | chr6_3:7948762-7948781 | None:intergenic | 30.0% | |
| ! | TCCAACTGGAAAATTTTCAT+CGG | + | chr6_3:7948779-7948798 | Msa0936970:CDS | 30.0% |
| !!! | TGTGGTTTTAGGAAATCATA+TGG | - | chr6_3:7948816-7948835 | None:intergenic | 30.0% |
| TTCCTAAAACCACAAATTGT+TGG | + | chr6_3:7948822-7948841 | Msa0936970:CDS | 30.0% | |
| ! | TACCAACAATTTGTGGTTTT+AGG | - | chr6_3:7948827-7948846 | None:intergenic | 30.0% |
| ATTCTTGTACCAACAATTTG+TGG | - | chr6_3:7948834-7948853 | None:intergenic | 30.0% | |
| GGAAAATTAGAGAACAAAGA+AGG | + | chr6_3:7948906-7948925 | Msa0936970:CDS | 30.0% | |
| AGAGAACAAAGAAGGATTAA+AGG | + | chr6_3:7948914-7948933 | Msa0936970:CDS | 30.0% | |
| !! | ATAGTGATGGATAAGAAATC+AGG | + | chr6_3:7948945-7948964 | Msa0936970:CDS | 30.0% |
| TTAGGATGATTAACAGAATC+AGG | - | chr6_3:7949104-7949123 | None:intergenic | 30.0% | |
| ! | TAGAATTGTGAAAAAGCATG+TGG | - | chr6_3:7949200-7949219 | None:intergenic | 30.0% |
| ! | CTGCCTATGATCTTGATAAT+TGG | + | chr6_3:7940590-7940609 | Msa0936970:CDS | 35.0% |
| TAGGTTTCATTTCAATGCCA+AGG | + | chr6_3:7940624-7940643 | Msa0936970:intron | 35.0% | |
| ATGTCTAAGCCATATTTGAG+TGG | + | chr6_3:7940851-7940870 | Msa0936970:intron | 35.0% | |
| TAATACGTCCATACTTTGGT+TGG | - | chr6_3:7940912-7940931 | None:intergenic | 35.0% | |
| AGACAACAACAAATCTGAAG+TGG | - | chr6_3:7941239-7941258 | None:intergenic | 35.0% | |
| ! | ATTCAAGTTAACATGAGTGC+AGG | + | chr6_3:7941429-7941448 | Msa0936970:intron | 35.0% |
| CATCTCTTTGATCTAACAAG+TGG | - | chr6_3:7941582-7941601 | None:intergenic | 35.0% | |
| AAACAATCCGTACATGTAGA+TGG | + | chr6_3:7941606-7941625 | Msa0936970:intron | 35.0% | |
| TAGAGAATGTTTCATCCTTG+TGG | + | chr6_3:7941750-7941769 | Msa0936970:intron | 35.0% | |
| TTGGTTATAGTCCTCATACT+TGG | + | chr6_3:7941920-7941939 | Msa0936970:intron | 35.0% | |
| TCAGAGATCCTTTAGTTGAA+TGG | - | chr6_3:7941981-7942000 | None:intergenic | 35.0% | |
| CATTGACCACATTGTACAAA+AGG | - | chr6_3:7942141-7942160 | None:intergenic | 35.0% | |
| TGCCTATAGTTTGATAGAAG+TGG | + | chr6_3:7942324-7942343 | Msa0936970:intron | 35.0% | |
| GATAGAAGTGGATGGAAATT+AGG | + | chr6_3:7942336-7942355 | Msa0936970:intron | 35.0% | |
| ACAAAGTGGCAAGAACAATT+TGG | - | chr6_3:7942370-7942389 | None:intergenic | 35.0% | |
| GTTGTACAAGGATTTCTACA+AGG | - | chr6_3:7942422-7942441 | None:intergenic | 35.0% | |
| !! | TACATTTGAGGTGTTGTACA+AGG | - | chr6_3:7942434-7942453 | None:intergenic | 35.0% |
| ! | TGCCTGTGATGTTTATTTCT+TGG | + | chr6_3:7942554-7942573 | Msa0936970:intron | 35.0% |
| AGCCAAGAAATAAACATCAC+AGG | - | chr6_3:7942559-7942578 | None:intergenic | 35.0% | |
| AACTTAGTCACTCCAATGTA+GGG | - | chr6_3:7942586-7942605 | None:intergenic | 35.0% | |
| AAACTTAGTCACTCCAATGT+AGG | - | chr6_3:7942587-7942606 | None:intergenic | 35.0% | |
| GTACACTACCTAAGAAAAAG+AGG | + | chr6_3:7942621-7942640 | Msa0936970:intron | 35.0% | |
| !! | TTGACAGATGCTTTTAGTTG+TGG | + | chr6_3:7943249-7943268 | Msa0936970:intron | 35.0% |
| !! | TCTGAAAGCGCTAATAAAAG+GGG | + | chr6_3:7943414-7943433 | Msa0936970:intron | 35.0% |
| !!! | CTATTAAAGGGGGTATTTTG+TGG | + | chr6_3:7943642-7943661 | Msa0936970:intron | 35.0% |
| ATGACATATTGTAGCAAGGA+AGG | + | chr6_3:7943718-7943737 | Msa0936970:intron | 35.0% | |
| !!! | GAAGGGTTTGAGAGTTTTTT+AGG | + | chr6_3:7943744-7943763 | Msa0936970:intron | 35.0% |
| GTAACTGTTGAAATAAGGGA+AGG | + | chr6_3:7943776-7943795 | Msa0936970:intron | 35.0% | |
| TGAATGGAATGAGGAAATTC+TGG | - | chr6_3:7944081-7944100 | None:intergenic | 35.0% | |
| TTTGTCACACCTTGAATTTG+TGG | - | chr6_3:7944118-7944137 | None:intergenic | 35.0% | |
| TCACAACTTGAATGTGAAGA+TGG | - | chr6_3:7944190-7944209 | None:intergenic | 35.0% | |
| !! | ATCTAAGAGAGTATCCCTAT+CGG | - | chr6_3:7944264-7944283 | None:intergenic | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+GGG | - | chr6_3:7944637-7944656 | None:intergenic | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+GGG | + | chr6_3:7944637-7944656 | Msa0936970:intron | 35.0% |
| ! | AATGTTACATTGGTCTACGA+TGG | - | chr6_3:7944844-7944863 | None:intergenic | 35.0% |
| ATCGTAGACCAATGTAACAT+TGG | + | chr6_3:7944843-7944862 | Msa0936970:intron | 35.0% | |
| CCTAATACATAGTGTCAAGT+TGG | - | chr6_3:7944985-7945004 | None:intergenic | 35.0% | |
| CCAACTTGACACTATGTATT+AGG | + | chr6_3:7944982-7945001 | Msa0936970:intron | 35.0% | |
| ATGGTTTCTATATTGGTCAC+CGG | - | chr6_3:7945034-7945053 | None:intergenic | 35.0% | |
| GCTGCTTATGGTTTCTATAT+TGG | - | chr6_3:7945041-7945060 | None:intergenic | 35.0% | |
| TATTAAGAGTGGTGCTTAGT+GGG | - | chr6_3:7945123-7945142 | None:intergenic | 35.0% | |
| ATATTAAGAGTGGTGCTTAG+TGG | - | chr6_3:7945124-7945143 | None:intergenic | 35.0% | |
| ! | ACATAGGAGCACAAATATCT+TGG | - | chr6_3:7945197-7945216 | None:intergenic | 35.0% |
| CAATGGCTCAATCAATAAGA+AGG | + | chr6_3:7945246-7945265 | Msa0936970:CDS | 35.0% | |
| GAAAGGTGATCTTACTTTGA+AGG | + | chr6_3:7945303-7945322 | Msa0936970:CDS | 35.0% | |
| ! | TTACTTTGAAGGTCACTAAC+TGG | + | chr6_3:7945314-7945333 | Msa0936970:CDS | 35.0% |
| ! | TACTTTGAAGGTCACTAACT+GGG | + | chr6_3:7945315-7945334 | Msa0936970:CDS | 35.0% |
| ATTTACCATTCTTGTCAGGA+AGG | - | chr6_3:7945363-7945382 | None:intergenic | 35.0% | |
| TCAGTTGAATCATGACTAAG+AGG | + | chr6_3:7945506-7945525 | Msa0936970:intron | 35.0% | |
| GTATGTGACACATTTGCATT+TGG | + | chr6_3:7945859-7945878 | Msa0936970:intron | 35.0% | |
| ! | TATCTTGACTCTTTTCAACC+TGG | + | chr6_3:7945922-7945941 | Msa0936970:intron | 35.0% |
| ! | ACTAGCTTACATAACAAGAG+AGG | + | chr6_3:7945953-7945972 | Msa0936970:intron | 35.0% |
| GTTATGTCTGGATCATGTTT+GGG | - | chr6_3:7946198-7946217 | None:intergenic | 35.0% | |
| GTATATGTTGGGAATTACAG+CGG | - | chr6_3:7946220-7946239 | None:intergenic | 35.0% | |
| ACTGTGAGAATATCTAGTCA+TGG | + | chr6_3:7946382-7946401 | Msa0936970:intron | 35.0% | |
| ! | GTTTTACTTGTTTGAAGACC+AGG | + | chr6_3:7946520-7946539 | Msa0936970:intron | 35.0% |
| AGGTACCTTGAACAATTGTT+TGG | + | chr6_3:7946632-7946651 | Msa0936970:intron | 35.0% | |
| AGTTGCCAAACAATTGTTCA+AGG | - | chr6_3:7946640-7946659 | None:intergenic | 35.0% | |
| GGAGCTAAGTTTACTCTAAA+TGG | + | chr6_3:7946824-7946843 | Msa0936970:CDS | 35.0% | |
| ! | GTGGAAAAGTATGTAAGAGA+AGG | + | chr6_3:7947120-7947139 | Msa0936970:CDS | 35.0% |
| !! | TTCAGTTACCACAGTTTTGA+TGG | + | chr6_3:7947162-7947181 | Msa0936970:CDS | 35.0% |
| CAGATGTTAGACACAATGTT+TGG | + | chr6_3:7947301-7947320 | Msa0936970:intron | 35.0% | |
| AGAAATACACGGGTCATATT+AGG | - | chr6_3:7947532-7947551 | None:intergenic | 35.0% | |
| AGTCCTAGATAGAAATACAC+GGG | - | chr6_3:7947542-7947561 | None:intergenic | 35.0% | |
| GAGTCCTAGATAGAAATACA+CGG | - | chr6_3:7947543-7947562 | None:intergenic | 35.0% | |
| AGAGGTTTCTCATATTTAGG+GGG | - | chr6_3:7947565-7947584 | None:intergenic | 35.0% | |
| GAGAGGTTTCTCATATTTAG+GGG | - | chr6_3:7947566-7947585 | None:intergenic | 35.0% | |
| GAGAGAGGTTTCTCATATTT+AGG | - | chr6_3:7947568-7947587 | None:intergenic | 35.0% | |
| TGATTGAGAGAAAATGAGAG+AGG | - | chr6_3:7947583-7947602 | None:intergenic | 35.0% | |
| TTTGTGTTAGTTGAGTTCAG+TGG | - | chr6_3:7947889-7947908 | None:intergenic | 35.0% | |
| !! | AGCCTTTTGATAATCAATGG+TGG | + | chr6_3:7947918-7947937 | Msa0936970:intron | 35.0% |
| !! | ACATGGGCTTTTTCTTCAAT+GGG | + | chr6_3:7948060-7948079 | Msa0936970:intron | 35.0% |
| ACAAGACTTGTAGAAACACA+CGG | + | chr6_3:7948213-7948232 | Msa0936970:intron | 35.0% | |
| ! | GGCTTTTGCTTGCATAATTA+TGG | - | chr6_3:7948625-7948644 | None:intergenic | 35.0% |
| ! | TACTGGTGTAGGTTTGTTTA+GGG | - | chr6_3:7948646-7948665 | None:intergenic | 35.0% |
| ! | TTACTGGTGTAGGTTTGTTT+AGG | - | chr6_3:7948647-7948666 | None:intergenic | 35.0% |
| AACCATGCTTATTGGAACTT+AGG | + | chr6_3:7948675-7948694 | Msa0936970:CDS | 35.0% | |
| TTCCTAAGTTCCAATAAGCA+TGG | - | chr6_3:7948680-7948699 | None:intergenic | 35.0% | |
| AACTTAGGAAACCATAACAG+TGG | + | chr6_3:7948690-7948709 | Msa0936970:CDS | 35.0% | |
| CTAAAATGTTGCCACTGTTA+TGG | - | chr6_3:7948704-7948723 | None:intergenic | 35.0% | |
| GACAATAACCTTATTCCAAC+TGG | + | chr6_3:7948765-7948784 | Msa0936970:CDS | 35.0% | |
| ! | ACCGATGAAAATTTTCCAGT+TGG | - | chr6_3:7948783-7948802 | None:intergenic | 35.0% |
| GCACTATAAAATTGCAATCC+AGG | - | chr6_3:7948999-7949018 | None:intergenic | 35.0% | |
| GTGAAGAATGATAAGGGAAA+AGG | + | chr6_3:7949026-7949045 | Msa0936970:CDS | 35.0% | |
| AAGAATGATAAGGGAAAAGG+AGG | + | chr6_3:7949029-7949048 | Msa0936970:CDS | 35.0% | |
| AGAATGATAAGGGAAAAGGA+GGG | + | chr6_3:7949030-7949049 | Msa0936970:CDS | 35.0% | |
| ! | TGAAAAAGCATGTGGAACTT+TGG | - | chr6_3:7949192-7949211 | None:intergenic | 35.0% |
| ! | ATATTTTTCGTGATCCACGG+TGG | + | chr6_3:7940437-7940456 | Msa0936970:CDS | 40.0% |
| ! | TATTTTTCGTGATCCACGGT+GGG | + | chr6_3:7940438-7940457 | Msa0936970:CDS | 40.0% |
| ! | GTTGATTTATGAGCCCAAAG+TGG | + | chr6_3:7940778-7940797 | Msa0936970:intron | 40.0% |
| ATTTATGAGCCCAAAGTGGT+AGG | + | chr6_3:7940782-7940801 | Msa0936970:intron | 40.0% | |
| TTAGAGCCGTAGCATATAGA+TGG | - | chr6_3:7941472-7941491 | None:intergenic | 40.0% | |
| ! | TATATGCTACGGCTCTAACA+AGG | + | chr6_3:7941474-7941493 | Msa0936970:intron | 40.0% |
| CAGTTGCAAGTACTAGTTGA+TGG | + | chr6_3:7941549-7941568 | Msa0936970:intron | 40.0% | |
| GCATACACCATCTACATGTA+CGG | - | chr6_3:7941616-7941635 | None:intergenic | 40.0% | |
| TGATGCAAAGTGAACTACAG+AGG | - | chr6_3:7941866-7941885 | None:intergenic | 40.0% | |
| TCTGATACTTCTTCAACACG+TGG | + | chr6_3:7941996-7942015 | Msa0936970:intron | 40.0% | |
| CACAGGAAAATGATTCCTAG+AGG | + | chr6_3:7942036-7942055 | Msa0936970:intron | 40.0% | |
| CTTAGTAACAACTGTCCTCT+AGG | - | chr6_3:7942054-7942073 | None:intergenic | 40.0% | |
| CTAGAGGACAGTTGTTACTA+AGG | + | chr6_3:7942052-7942071 | Msa0936970:intron | 40.0% | |
| ! | TTACTAAGGTGCTCAAATGC+TGG | + | chr6_3:7942066-7942085 | Msa0936970:intron | 40.0% |
| ! | TACTAAGGTGCTCAAATGCT+GGG | + | chr6_3:7942067-7942086 | Msa0936970:intron | 40.0% |
| TGGGATTTACCTCCTAAACA+TGG | + | chr6_3:7942086-7942105 | Msa0936970:intron | 40.0% | |
| GAAGTGGATGGAAATTAGGT+TGG | + | chr6_3:7942340-7942359 | Msa0936970:intron | 40.0% | |
| ACTTAGTCACTCCAATGTAG+GGG | - | chr6_3:7942585-7942604 | None:intergenic | 40.0% | |
| TCACAATGTCATGTCCCTTA+TGG | + | chr6_3:7942840-7942859 | Msa0936970:intron | 40.0% | |
| ! | TGTCCCTTATGGAGAGTTTT+TGG | + | chr6_3:7942851-7942870 | Msa0936970:intron | 40.0% |
| CTACCTTGCAATCTTACTTC+AGG | + | chr6_3:7942905-7942924 | Msa0936970:intron | 40.0% | |
| GAACCTGAAGTAAGATTGCA+AGG | - | chr6_3:7942911-7942930 | None:intergenic | 40.0% | |
| !! | CGTTTGGAAAGCGCTATTAT+AGG | + | chr6_3:7943552-7943571 | Msa0936970:intron | 40.0% |
| CATATTGTAGCAAGGAAGGA+AGG | + | chr6_3:7943722-7943741 | Msa0936970:intron | 40.0% | |
| ACCAAAAGATGAGACCGATA+GGG | + | chr6_3:7944247-7944266 | Msa0936970:intron | 40.0% | |
| ! | AAACGGAGGGAGTAGTTTTT+AGG | - | chr6_3:7944395-7944414 | None:intergenic | 40.0% |
| !!! | GGACATGTATTTTGAAACGG+AGG | - | chr6_3:7944636-7944655 | None:intergenic | 40.0% |
| TAACGGTCAAAATCGTGCAT+TGG | + | chr6_3:7944592-7944611 | Msa0936970:intron | 40.0% | |
| CATATGTGAAGTGGTTGACT+TGG | + | chr6_3:7944615-7944634 | Msa0936970:intron | 40.0% | |
| !!! | GGACATGTATTTTGAAACGG+AGG | + | chr6_3:7944636-7944655 | Msa0936970:intron | 40.0% |
| CCTCGTCTTTATGGTTGAAA+GGG | - | chr6_3:7944755-7944774 | None:intergenic | 40.0% | |
| TCCTCGTCTTTATGGTTGAA+AGG | - | chr6_3:7944756-7944775 | None:intergenic | 40.0% | |
| TGGTTTCTATATTGGTCACC+GGG | - | chr6_3:7945033-7945052 | None:intergenic | 40.0% | |
| AAAGTCAATGTGGCTGCTTA+TGG | - | chr6_3:7945053-7945072 | None:intergenic | 40.0% | |
| CTGCTAAGAAGAGAAGACAT+AGG | - | chr6_3:7945213-7945232 | None:intergenic | 40.0% | |
| ! | ACTTTGAAGGTCACTAACTG+GGG | + | chr6_3:7945316-7945335 | Msa0936970:CDS | 40.0% |
| AAGTTGGGTGATATCGTTCT+TGG | + | chr6_3:7945676-7945695 | Msa0936970:CDS | 40.0% | |
| ! | ACTGCTATCGACTGTACTTA+CGG | - | chr6_3:7945986-7946005 | None:intergenic | 40.0% |
| TAAGTACAGTCGATAGCAGT+AGG | + | chr6_3:7945986-7946005 | Msa0936970:intron | 40.0% | |
| AAGTACAGTCGATAGCAGTA+GGG | + | chr6_3:7945987-7946006 | Msa0936970:intron | 40.0% | |
| CAAAAGGTCTGCTACAATCA+TGG | + | chr6_3:7946085-7946104 | Msa0936970:intron | 40.0% | |
| ! | CTGGATCATGTTTGGGATTA+CGG | - | chr6_3:7946191-7946210 | None:intergenic | 40.0% |
| GGTTATGTCTGGATCATGTT+TGG | - | chr6_3:7946199-7946218 | None:intergenic | 40.0% | |
| ! | CTTTTTCTTACCTTCTCCCT+TGG | + | chr6_3:7946354-7946373 | Msa0936970:intron | 40.0% |
| ATTCTCACAGTTCACACCAA+GGG | - | chr6_3:7946373-7946392 | None:intergenic | 40.0% | |
| TATTCTCACAGTTCACACCA+AGG | - | chr6_3:7946374-7946393 | None:intergenic | 40.0% | |
| !! | CATCTCAAGTTGATCCAATG+AGG | - | chr6_3:7946585-7946604 | None:intergenic | 40.0% |
| TCTATTAGCAACCCTACCAA+CGG | - | chr6_3:7946798-7946817 | None:intergenic | 40.0% | |
| GGTAGGGTTGCTAATAGAAT+TGG | + | chr6_3:7946800-7946819 | Msa0936970:CDS | 40.0% | |
| AGGGTTGCTAATAGAATTGG+AGG | + | chr6_3:7946803-7946822 | Msa0936970:CDS | 40.0% | |
| GAGGATTCAGTGATGTTCTT+TGG | + | chr6_3:7947094-7947113 | Msa0936970:CDS | 40.0% | |
| ! | CAGTGATGTTCTTTGGAAAG+TGG | + | chr6_3:7947101-7947120 | Msa0936970:CDS | 40.0% |
| CTTCTTCACCATCAAAACTG+TGG | - | chr6_3:7947173-7947192 | None:intergenic | 40.0% | |
| !!! | CACAGTTTTGATGGTGAAGA+AGG | + | chr6_3:7947171-7947190 | Msa0936970:CDS | 40.0% |
| GAAATAATTCTCCTTCACCC+AGG | + | chr6_3:7947277-7947296 | Msa0936970:intron | 40.0% | |
| TTGTGTCTAACATCTGTCCT+GGG | - | chr6_3:7947297-7947316 | None:intergenic | 40.0% | |
| ATTGTGTCTAACATCTGTCC+TGG | - | chr6_3:7947298-7947317 | None:intergenic | 40.0% | |
| ! | AACACAGAGAATTGGTAACC+CGG | + | chr6_3:7947392-7947411 | Msa0936970:intron | 40.0% |
| ! | TGACCCGTGTATTTCTATCT+AGG | + | chr6_3:7947536-7947555 | Msa0936970:intron | 40.0% |
| ! | CGCCACCATTGATTATCAAA+AGG | - | chr6_3:7947923-7947942 | None:intergenic | 40.0% |
| TGTGGATGAATGGCTGTATA+AGG | - | chr6_3:7948043-7948062 | None:intergenic | 40.0% | |
| TATACAGCCATTCATCCACA+TGG | + | chr6_3:7948043-7948062 | Msa0936970:intron | 40.0% | |
| ATACAGCCATTCATCCACAT+GGG | + | chr6_3:7948044-7948063 | Msa0936970:intron | 40.0% | |
| AAAAAGCCCATGTGGATGAA+TGG | - | chr6_3:7948053-7948072 | None:intergenic | 40.0% | |
| CATTGAAGAAAAAGCCCATG+TGG | - | chr6_3:7948061-7948080 | None:intergenic | 40.0% | |
| !! | CACATGGGCTTTTTCTTCAA+TGG | + | chr6_3:7948059-7948078 | Msa0936970:intron | 40.0% |
| ! | GTATGCTTCAAGGTATTTCC+AGG | - | chr6_3:7948130-7948149 | None:intergenic | 40.0% |
| TCTTACCGCTGACATAGATT+AGG | + | chr6_3:7948437-7948456 | Msa0936970:intron | 40.0% | |
| AGTCTCCTAATCTATGTCAG+CGG | - | chr6_3:7948445-7948464 | None:intergenic | 40.0% | |
| GTTTCCATTACAGGATTTCC+TGG | + | chr6_3:7948552-7948571 | Msa0936970:intron | 40.0% | |
| !! | TGTAGCTCACTGTTACTTTG+AGG | - | chr6_3:7948581-7948600 | None:intergenic | 40.0% |
| GTAACAGTGAGCTACATTCT+AGG | + | chr6_3:7948585-7948604 | Msa0936970:CDS | 40.0% | |
| ! | GGAAAATTTTCATCGGTCGA+AGG | + | chr6_3:7948786-7948805 | Msa0936970:CDS | 40.0% |
| AAAGGTTGCAGCTATAGTGA+TGG | + | chr6_3:7948932-7948951 | Msa0936970:CDS | 40.0% | |
| AAGCTTAGTACTAATGCTCC+TGG | + | chr6_3:7948978-7948997 | Msa0936970:CDS | 40.0% | |
| ! | AAAAGCATGTGGAACTTTGG+TGG | - | chr6_3:7949189-7949208 | None:intergenic | 40.0% |
| ! | ATGTATAATGGTGGAGCTGC+AGG | + | chr6_3:7940388-7940407 | Msa0936970:CDS | 45.0% |
| ! | TGTATAATGGTGGAGCTGCA+GGG | + | chr6_3:7940389-7940408 | Msa0936970:CDS | 45.0% |
| ! | ATTTTTCGTGATCCACGGTG+GGG | + | chr6_3:7940439-7940458 | Msa0936970:CDS | 45.0% |
| TAGTCCTTGAACATAGGCTG+CGG | - | chr6_3:7940515-7940534 | None:intergenic | 45.0% | |
| GCCTATGTTCAAGGACTACA+AGG | + | chr6_3:7940517-7940536 | Msa0936970:CDS | 45.0% | |
| GCCTTGTAGTCCTTGAACAT+AGG | - | chr6_3:7940521-7940540 | None:intergenic | 45.0% | |
| GTTCAAGGACTACAAGGCAA+CGG | + | chr6_3:7940523-7940542 | Msa0936970:CDS | 45.0% | |
| AATGGCCCCCCTTATAAGTA+TGG | - | chr6_3:7940691-7940710 | None:intergenic | 45.0% | |
| AGTGGTTACTAGTTGCGCAT+GGG | + | chr6_3:7940869-7940888 | Msa0936970:intron | 45.0% | |
| GCAAAGTGAACTACAGAGGT+TGG | - | chr6_3:7941862-7941881 | None:intergenic | 45.0% | |
| TCAGACCCTATCTTGACTAG+TGG | + | chr6_3:7941883-7941902 | Msa0936970:intron | 45.0% | |
| GTGTCAAGCTTCCAAGTATG+AGG | - | chr6_3:7941934-7941953 | None:intergenic | 45.0% | |
| TCTTCAACACGTGGAACTAG+TGG | + | chr6_3:7942005-7942024 | Msa0936970:intron | 45.0% | |
| !! | AACTAGTGGCTGTTTTGCAC+AGG | + | chr6_3:7942019-7942038 | Msa0936970:intron | 45.0% |
| ! | CTGGTCCCTTTTGTACAATG+TGG | + | chr6_3:7942132-7942151 | Msa0936970:intron | 45.0% |
| GCAATACGGGTCTACATTTG+AGG | - | chr6_3:7942446-7942465 | None:intergenic | 45.0% | |
| CACGTCAGAATTGGCAATAC+GGG | - | chr6_3:7942459-7942478 | None:intergenic | 45.0% | |
| CCACGTCAGAATTGGCAATA+CGG | - | chr6_3:7942460-7942479 | None:intergenic | 45.0% | |
| AAGCAATGCCACGTCAGAAT+TGG | - | chr6_3:7942468-7942487 | None:intergenic | 45.0% | |
| CAGGTTCGTTAGAATTCTCG+AGG | + | chr6_3:7942924-7942943 | Msa0936970:intron | 45.0% | |
| AATTCTCGAGGTCAACCAGT+TGG | + | chr6_3:7942936-7942955 | Msa0936970:intron | 45.0% | |
| ATTCTCGAGGTCAACCAGTT+GGG | + | chr6_3:7942937-7942956 | Msa0936970:intron | 45.0% | |
| CAATGCAGCTGACAAAACCT+TGG | - | chr6_3:7942971-7942990 | None:intergenic | 45.0% | |
| !! | CAAGGTTTTGTCAGCTGCAT+TGG | + | chr6_3:7942969-7942988 | Msa0936970:intron | 45.0% |
| ACATTGGAGTCATCGTTCGT+CGG | + | chr6_3:7943006-7943025 | Msa0936970:intron | 45.0% | |
| TCGGGAGGTTCCAATTTGTA+TGG | + | chr6_3:7943025-7943044 | Msa0936970:intron | 45.0% | |
| ! | AGGCTCCTGACCTTTTATAG+CGG | + | chr6_3:7943572-7943591 | Msa0936970:intron | 45.0% |
| AAGAAAGCCCCCGCTATAAA+AGG | - | chr6_3:7943585-7943604 | None:intergenic | 45.0% | |
| !!! | AAGGGGGTATTTTGTGGTAG+TGG | + | chr6_3:7943648-7943667 | Msa0936970:intron | 45.0% |
| !!! | GGGTATTTTGTGGTAGTGGT+GGG | + | chr6_3:7943652-7943671 | Msa0936970:intron | 45.0% |
| TTGTAGCAAGGAAGGAAGGA+AGG | + | chr6_3:7943726-7943745 | Msa0936970:intron | 45.0% | |
| TGTAGCAAGGAAGGAAGGAA+GGG | + | chr6_3:7943727-7943746 | Msa0936970:intron | 45.0% | |
| CACCAAAAGATGAGACCGAT+AGG | + | chr6_3:7944246-7944265 | Msa0936970:intron | 45.0% | |
| ! | TCCCTATCGGTCTCATCTTT+TGG | - | chr6_3:7944251-7944270 | None:intergenic | 45.0% |
| ! | GTGCATTGGCATATGTGAAG+TGG | + | chr6_3:7944606-7944625 | Msa0936970:intron | 45.0% |
| GGTTGAAAGGGTGACTTGAT+CGG | - | chr6_3:7944743-7944762 | None:intergenic | 45.0% | |
| CCCTTTCAACCATAAAGACG+AGG | + | chr6_3:7944752-7944771 | Msa0936970:intron | 45.0% | |
| CGTGATTCTCCTCGTCTTTA+TGG | - | chr6_3:7944764-7944783 | None:intergenic | 45.0% | |
| TGTGACGTTCATGTTCTCCT+AGG | - | chr6_3:7944944-7944963 | None:intergenic | 45.0% | |
| GTTTCTATATTGGTCACCGG+GGG | - | chr6_3:7945031-7945050 | None:intergenic | 45.0% | |
| GGTTTCTATATTGGTCACCG+GGG | - | chr6_3:7945032-7945051 | None:intergenic | 45.0% | |
| CTTCTCTTCTTAGCAGCTTC+TGG | + | chr6_3:7945217-7945236 | Msa0936970:CDS | 45.0% | |
| GCAGCTTCTGGATTTGTCAA+TGG | + | chr6_3:7945229-7945248 | Msa0936970:CDS | 45.0% | |
| CTAGTCCTTCCTGACAAGAA+TGG | + | chr6_3:7945355-7945374 | Msa0936970:CDS | 45.0% | |
| !!! | GTAAGCTAGTTTTGTAGGCC+AGG | - | chr6_3:7945943-7945962 | None:intergenic | 45.0% |
| ! | CTGCTATCGACTGTACTTAC+GGG | - | chr6_3:7945985-7946004 | None:intergenic | 45.0% |
| AAGGTCTGCTACAATCATGG+TGG | + | chr6_3:7946088-7946107 | Msa0936970:intron | 45.0% | |
| CGGTGGTTATGTCAGAATCA+TGG | - | chr6_3:7946171-7946190 | None:intergenic | 45.0% | |
| ! | GATCATGTTTGGGATTACGG+TGG | - | chr6_3:7946188-7946207 | None:intergenic | 45.0% |
| GGAATTACAGCGGTTATGTC+TGG | - | chr6_3:7946210-7946229 | None:intergenic | 45.0% | |
| !! | TCATACTTTGGAGCAACCGT+TGG | + | chr6_3:7946779-7946798 | Msa0936970:CDS | 45.0% |
| GAAGGAAACAACACTCTCCA+TGG | + | chr6_3:7946872-7946891 | Msa0936970:CDS | 45.0% | |
| ! | AGAGAATTGGTAACCCGGTT+CGG | + | chr6_3:7947397-7947416 | Msa0936970:intron | 45.0% |
| GAGTGAAAGACCTTCAGAGT+AGG | - | chr6_3:7947433-7947452 | None:intergenic | 45.0% | |
| !! | AGGTGAAGAGGCATTGAACA+AGG | - | chr6_3:7947512-7947531 | None:intergenic | 45.0% |
| ACGGGTCATATTAGGTGAAG+AGG | - | chr6_3:7947524-7947543 | None:intergenic | 45.0% | |
| CTCAAACAGTGGCGATTCTA+AGG | + | chr6_3:7947654-7947673 | Msa0936970:intron | 45.0% | |
| GTGTTAGTTGAGTTCAGTGG+CGG | - | chr6_3:7947886-7947905 | None:intergenic | 45.0% | |
| CGTGTGCTACAAGTTACTGT+GGG | - | chr6_3:7948190-7948209 | None:intergenic | 45.0% | |
| GTCACCAGGAAATCCTGTAA+TGG | - | chr6_3:7948559-7948578 | None:intergenic | 45.0% | |
| !! | ACTGTTACTTTGAGGTCACC+AGG | - | chr6_3:7948573-7948592 | None:intergenic | 45.0% |
| ACCACGTTCAGCACTTTGTT+TGG | + | chr6_3:7949064-7949083 | Msa0936970:CDS | 45.0% | |
| !! | TCCAAACAAAGTGCTGAACG+TGG | - | chr6_3:7949068-7949087 | None:intergenic | 45.0% |
| !! | ACAAATAAAATTATAATATT+AGG | - | chr6_3:7940659-7940678 | None:intergenic | 5.0% |
| !! | TTATTGTTTATTTATATTAA+TGG | + | chr6_3:7943188-7943207 | Msa0936970:intron | 5.0% |
| !!! | AATTTTTTATATAAATTTGT+AGG | + | chr6_3:7945161-7945180 | Msa0936970:intron | 5.0% |
| !! | GAGCTGCAGGGTTGACTTTT+TGG | + | chr6_3:7940401-7940420 | Msa0936970:CDS | 50.0% |
| ! | ATAGGCTGCGGCGTATTTTC+CGG | - | chr6_3:7940503-7940522 | None:intergenic | 50.0% |
| AACAAGCGACAACCTTGAGC+CGG | - | chr6_3:7940558-7940577 | None:intergenic | 50.0% | |
| GAGTGGTTACTAGTTGCGCA+TGG | + | chr6_3:7940868-7940887 | Msa0936970:intron | 50.0% | |
| ACCTCCTAAACATGGCACTC+CGG | + | chr6_3:7942094-7942113 | Msa0936970:intron | 50.0% | |
| CCGTATTGCCAATTCTGACG+TGG | + | chr6_3:7942457-7942476 | Msa0936970:intron | 50.0% | |
| TCTTGGCTACACCCCTACAT+TGG | + | chr6_3:7942571-7942590 | Msa0936970:intron | 50.0% | |
| TTCTCGAGGTCAACCAGTTG+GGG | + | chr6_3:7942938-7942957 | Msa0936970:intron | 50.0% | |
| GGAGTCATCGTTCGTCACAT+TGG | + | chr6_3:7942990-7943009 | Msa0936970:intron | 50.0% | |
| CATTGGAGTCATCGTTCGTC+GGG | + | chr6_3:7942986-7943005 | Msa0936970:intron | 50.0% | |
| ! | GGCTCCTGACCTTTTATAGC+GGG | + | chr6_3:7943573-7943592 | Msa0936970:intron | 50.0% |
| ! | GCTCCTGACCTTTTATAGCG+GGG | + | chr6_3:7943574-7943593 | Msa0936970:intron | 50.0% |
| ! | CTCCTGACCTTTTATAGCGG+GGG | + | chr6_3:7943575-7943594 | Msa0936970:intron | 50.0% |
| !!! | GGGGTATTTTGTGGTAGTGG+TGG | + | chr6_3:7943651-7943670 | Msa0936970:intron | 50.0% |
| AGTATGAGATCCACATCCCC+CGG | + | chr6_3:7945012-7945031 | Msa0936970:intron | 50.0% | |
| ACAGTTCACACCAAGGGAGA+AGG | - | chr6_3:7946367-7946386 | None:intergenic | 50.0% | |
| !! | ACTTTGGAGCAACCGTTGGT+AGG | + | chr6_3:7946783-7946802 | Msa0936970:CDS | 50.0% |
| !! | CTTTGGAGCAACCGTTGGTA+GGG | + | chr6_3:7946784-7946803 | Msa0936970:CDS | 50.0% |
| CTAACATCTGTCCTGGGTGA+AGG | - | chr6_3:7947291-7947310 | None:intergenic | 50.0% | |
| TGCAACGTCACCTACTCTGA+AGG | + | chr6_3:7947420-7947439 | Msa0936970:intron | 50.0% | |
| AAAAAATTTGGGCCGGAGCC+CGG | - | chr6_3:7947702-7947721 | None:intergenic | 50.0% | |
| ! | AATCAATGGTGGCGCTAGTG+TGG | + | chr6_3:7947929-7947948 | Msa0936970:intron | 50.0% |
| GCGTGTGCTACAAGTTACTG+TGG | - | chr6_3:7948191-7948210 | None:intergenic | 50.0% | |
| GATCTTCACCGGGTGTCTCT+TGG | - | chr6_3:7940471-7940490 | None:intergenic | 55.0% | |
| TACGCCGCAGCCTATGTTCA+AGG | + | chr6_3:7940508-7940527 | Msa0936970:CDS | 55.0% | |
| ! | GACAACCTTGAGCCGGTTTC+CGG | - | chr6_3:7940551-7940570 | None:intergenic | 55.0% |
| ! | TCCGGAGTGCCATGTTTAGG+AGG | - | chr6_3:7942098-7942117 | None:intergenic | 55.0% |
| ! | GACTCCGGAGTGCCATGTTT+AGG | - | chr6_3:7942101-7942120 | None:intergenic | 55.0% |
| CCAGCAGCAGCATAAGACTC+CGG | - | chr6_3:7942116-7942135 | None:intergenic | 55.0% | |
| ! | CCTTGGCTTTCTTCCCCAAC+TGG | - | chr6_3:7942954-7942973 | None:intergenic | 55.0% |
| CCAGTTGGGGAAGAAAGCCA+AGG | + | chr6_3:7942951-7942970 | Msa0936970:intron | 55.0% | |
| AGCCCCCGCTATAAAAGGTC+AGG | - | chr6_3:7943580-7943599 | None:intergenic | 55.0% | |
| ATATTGGTCACCGGGGGATG+TGG | - | chr6_3:7945025-7945044 | None:intergenic | 55.0% | |
| TAGGTGACGTTGCACCGAAC+CGG | - | chr6_3:7947414-7947433 | None:intergenic | 55.0% | |
| !! | ACAGTGGCGATTCTAAGGCC+CGG | + | chr6_3:7947659-7947678 | Msa0936970:intron | 55.0% |
| AAAAATTTGGGCCGGAGCCC+GGG | - | chr6_3:7947701-7947720 | None:intergenic | 55.0% | |
| ACCCGGTGAAGATCACACCG+TGG | + | chr6_3:7940477-7940496 | Msa0936970:CDS | 60.0% | |
| GCCACGGTGTGATCTTCACC+GGG | - | chr6_3:7940481-7940500 | None:intergenic | 60.0% | |
| GGCCACGGTGTGATCTTCAC+CGG | - | chr6_3:7940482-7940501 | None:intergenic | 60.0% | |
| GGTGAAGATCACACCGTGGC+CGG | + | chr6_3:7940481-7940500 | Msa0936970:CDS | 60.0% | |
| ! | TGCGGCGTATTTTCCGGCCA+CGG | - | chr6_3:7940497-7940516 | None:intergenic | 60.0% |
| GGACTACAAGGCAACGGTGC+CGG | + | chr6_3:7940529-7940548 | Msa0936970:CDS | 60.0% | |
| ! | AAGGCAACGGTGCCGGAAAC+CGG | + | chr6_3:7940536-7940555 | Msa0936970:CDS | 60.0% |
| ! | CCGGAGTCTTATGCTGCTGC+TGG | + | chr6_3:7942113-7942132 | Msa0936970:intron | 60.0% |
| TGGAGTCATCGTTCGTCGGG+AGG | + | chr6_3:7943010-7943029 | Msa0936970:intron | 60.0% | |
| ! | GAATATGGAGGGCGCGTGAG+AGG | + | chr6_3:7943903-7943922 | Msa0936970:intron | 60.0% |
| AGGTGACGTTGCACCGAACC+GGG | - | chr6_3:7947413-7947432 | None:intergenic | 60.0% | |
| GGTCGTGGCCAAGAGACACC+CGG | + | chr6_3:7940460-7940479 | Msa0936970:CDS | 65.0% | |
| !! | ATTCTAAGGCCCGGCGAGCC+CGG | + | chr6_3:7947668-7947687 | Msa0936970:intron | 65.0% |
| CGTGATCCACGGTGGGGTCG+TGG | + | chr6_3:7940445-7940464 | Msa0936970:CDS | 70.0% | |
| TCTTGGCCACGACCCCACCG+TGG | - | chr6_3:7940454-7940473 | None:intergenic | 70.0% | |
| ! | CGGTGCCGGAAACCGGCTCA+AGG | + | chr6_3:7940543-7940562 | Msa0936970:CDS | 70.0% |
| GGCAAGTGTCCGGGCTCGCC+GGG | - | chr6_3:7947680-7947699 | None:intergenic | 75.0% | |
| GGGCAAGTGTCCGGGCTCGC+CGG | - | chr6_3:7947681-7947700 | None:intergenic | 75.0% | |
| GGCGAGCCCGGACACTTGCC+CGG | + | chr6_3:7947680-7947699 | Msa0936970:intron | 75.0% | |
| GCGAGCCCGGACACTTGCCC+GGG | + | chr6_3:7947681-7947700 | Msa0936970:intron | 75.0% | |
| CGGAGCCCGGGCAAGTGTCC+GGG | - | chr6_3:7947689-7947708 | None:intergenic | 75.0% | |
| CCGGAGCCCGGGCAAGTGTC+CGG | - | chr6_3:7947690-7947709 | None:intergenic | 75.0% | |
| CCGGACACTTGCCCGGGCTC+CGG | + | chr6_3:7947687-7947706 | Msa0936970:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 7940388 | 7949220 | 7940388 | ID=Msa0936970;Name=Msa0936970 |
| chr6_3 | mRNA | 7940388 | 7949220 | 7940388 | ID=Msa0936970-mRNA-1;Parent=Msa0936970;Name=Msa0936970-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.8|0.5|0.83|0.8|0.83|6|0|456 |
| chr6_3 | exon | 7940388 | 7940626 | 7940388 | ID=Msa0936970-mRNA-1:exon:2623;Parent=Msa0936970-mRNA-1 |
| chr6_3 | exon | 7945183 | 7945376 | 7945183 | ID=Msa0936970-mRNA-1:exon:2624;Parent=Msa0936970-mRNA-1 |
| chr6_3 | exon | 7945674 | 7945723 | 7945674 | ID=Msa0936970-mRNA-1:exon:2625;Parent=Msa0936970-mRNA-1 |
| chr6_3 | exon | 7946770 | 7946893 | 7946770 | ID=Msa0936970-mRNA-1:exon:2626;Parent=Msa0936970-mRNA-1 |
| chr6_3 | exon | 7947085 | 7947192 | 7947085 | ID=Msa0936970-mRNA-1:exon:2627;Parent=Msa0936970-mRNA-1 |
| chr6_3 | exon | 7948565 | 7949220 | 7948565 | ID=Msa0936970-mRNA-1:exon:2628;Parent=Msa0936970-mRNA-1 |
| chr6_3 | CDS | 7940388 | 7940626 | 7940388 | ID=Msa0936970-mRNA-1:cds;Parent=Msa0936970-mRNA-1 |
| chr6_3 | CDS | 7945183 | 7945376 | 7945183 | ID=Msa0936970-mRNA-1:cds;Parent=Msa0936970-mRNA-1 |
| chr6_3 | CDS | 7945674 | 7945723 | 7945674 | ID=Msa0936970-mRNA-1:cds;Parent=Msa0936970-mRNA-1 |
| chr6_3 | CDS | 7946770 | 7946893 | 7946770 | ID=Msa0936970-mRNA-1:cds;Parent=Msa0936970-mRNA-1 |
| chr6_3 | CDS | 7947085 | 7947192 | 7947085 | ID=Msa0936970-mRNA-1:cds;Parent=Msa0936970-mRNA-1 |
| chr6_3 | CDS | 7948565 | 7949220 | 7948565 | ID=Msa0936970-mRNA-1:cds;Parent=Msa0936970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
