Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937120 | XP_039682786.1 | 77.350 | 702 | 85 | 5 | 5 | 632 | 10 | 711 | 0.0 | 1064 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937120 | sp|Q9ZVH4|CUL3A_ARATH | 63.909 | 701 | 178 | 5 | 6 | 632 | 14 | 713 | 0.0 | 872 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0937120 | Msa1057420 | 0.800289 | 1.545402e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937120 | MtrunA17_Chr6g0453081 | 77.350 | 702 | 85 | 5 | 5 | 632 | 10 | 711 | 0.0 | 1064 |
| Msa0937120 | MtrunA17_Chr6g0453061 | 74.322 | 701 | 106 | 4 | 6 | 632 | 11 | 711 | 0.0 | 998 |
| Msa0937120 | MtrunA17_Chr8g0361901 | 65.621 | 701 | 166 | 6 | 6 | 632 | 13 | 712 | 0.0 | 900 |
| Msa0937120 | MtrunA17_Chr5g0416711 | 60.819 | 684 | 193 | 5 | 11 | 620 | 19 | 701 | 0.0 | 815 |
| Msa0937120 | MtrunA17_Chr1g0166181 | 57.580 | 686 | 213 | 7 | 12 | 620 | 24 | 708 | 0.0 | 745 |
| Msa0937120 | MtrunA17_Chr7g0231701 | 58.742 | 652 | 203 | 6 | 45 | 632 | 40 | 689 | 0.0 | 730 |
| Msa0937120 | MtrunA17_Chr1g0166131 | 56.414 | 686 | 221 | 7 | 12 | 620 | 25 | 709 | 0.0 | 726 |
| Msa0937120 | MtrunA17_Chr1g0166141 | 59.331 | 568 | 179 | 4 | 104 | 620 | 77 | 643 | 0.0 | 642 |
| Msa0937120 | MtrunA17_Chr7g0231741 | 72.222 | 342 | 89 | 2 | 284 | 620 | 4 | 344 | 0.0 | 518 |
| Msa0937120 | MtrunA17_Chr7g0231791 | 53.699 | 365 | 157 | 6 | 263 | 620 | 11 | 370 | 1.99e-129 | 386 |
| Msa0937120 | MtrunA17_Chr5g0416691 | 53.050 | 377 | 165 | 6 | 263 | 632 | 11 | 382 | 4.06e-129 | 385 |
| Msa0937120 | MtrunA17_Chr2g0285881 | 37.300 | 689 | 340 | 14 | 11 | 619 | 86 | 762 | 7.15e-126 | 390 |
| Msa0937120 | MtrunA17_Chr5g0416831 | 67.164 | 268 | 67 | 3 | 330 | 592 | 1 | 252 | 1.39e-120 | 359 |
| Msa0937120 | MtrunA17_Chr5g0416731 | 46.618 | 414 | 107 | 5 | 45 | 344 | 25 | 438 | 1.33e-104 | 324 |
| Msa0937120 | MtrunA17_Chr7g0231751 | 56.475 | 278 | 96 | 2 | 11 | 263 | 19 | 296 | 7.01e-96 | 296 |
| Msa0937120 | MtrunA17_Chr7g0231721 | 48.896 | 317 | 92 | 4 | 45 | 291 | 25 | 341 | 2.55e-86 | 273 |
| Msa0937120 | MtrunA17_Chr4g0067011 | 30.055 | 722 | 390 | 19 | 18 | 632 | 12 | 725 | 4.81e-80 | 268 |
| Msa0937120 | MtrunA17_Chr2g0296381 | 28.650 | 726 | 395 | 17 | 18 | 632 | 10 | 723 | 1.50e-78 | 264 |
| Msa0937120 | MtrunA17_Chr5g0416901 | 44.795 | 317 | 105 | 3 | 47 | 294 | 21 | 336 | 8.77e-76 | 246 |
| Msa0937120 | MtrunA17_Chr7g0231581 | 45.048 | 313 | 102 | 3 | 51 | 294 | 1 | 312 | 5.42e-75 | 243 |
| Msa0937120 | MtrunA17_Chr7g0231571 | 52.119 | 236 | 87 | 2 | 51 | 261 | 1 | 235 | 1.20e-69 | 226 |
| Msa0937120 | MtrunA17_Chr5g0416911 | 50.000 | 240 | 94 | 2 | 47 | 261 | 5 | 243 | 8.79e-67 | 219 |
| Msa0937120 | MtrunA17_Chr7g0268881 | 37.190 | 363 | 208 | 10 | 270 | 620 | 4 | 358 | 1.46e-61 | 209 |
| Msa0937120 | MtrunA17_Chr7g0231801 | 47.059 | 238 | 99 | 3 | 51 | 261 | 1 | 238 | 1.13e-53 | 184 |
| Msa0937120 | MtrunA17_Chr5g0416681 | 47.059 | 238 | 99 | 3 | 51 | 261 | 1 | 238 | 4.27e-53 | 182 |
| Msa0937120 | MtrunA17_Chr1g0166151 | 45.556 | 180 | 74 | 2 | 75 | 230 | 1 | 180 | 2.55e-42 | 151 |
| Msa0937120 | MtrunA17_Chr5g0416931 | 47.273 | 165 | 62 | 1 | 45 | 184 | 38 | 202 | 1.73e-39 | 144 |
| Msa0937120 | MtrunA17_Chr7g0231561 | 45.283 | 159 | 62 | 1 | 51 | 184 | 1 | 159 | 5.57e-36 | 132 |
| Msa0937120 | MtrunA17_Chr7g0268891 | 27.181 | 298 | 178 | 7 | 7 | 267 | 1 | 296 | 5.13e-26 | 109 |
| Msa0937120 | MtrunA17_Chr5g0416841 | 57.955 | 88 | 37 | 0 | 174 | 261 | 14 | 101 | 1.88e-25 | 101 |
| Msa0937120 | MtrunA17_Chr5g0416721 | 56.863 | 51 | 17 | 1 | 1 | 46 | 4 | 54 | 1.16e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937120 | AT1G26830.1 | 63.909 | 701 | 178 | 5 | 6 | 632 | 14 | 713 | 0.0 | 872 |
| Msa0937120 | AT1G69670.1 | 63.766 | 701 | 179 | 5 | 6 | 632 | 14 | 713 | 0.0 | 870 |
| Msa0937120 | AT1G69670.2 | 63.766 | 701 | 179 | 5 | 6 | 632 | 14 | 713 | 0.0 | 870 |
| Msa0937120 | AT5G46210.1 | 37.048 | 691 | 343 | 15 | 9 | 619 | 84 | 762 | 1.12e-119 | 374 |
| Msa0937120 | AT4G02570.4 | 32.106 | 679 | 346 | 17 | 44 | 620 | 42 | 707 | 1.07e-91 | 299 |
| Msa0937120 | AT4G02570.2 | 32.106 | 679 | 346 | 17 | 44 | 620 | 42 | 707 | 1.07e-91 | 299 |
| Msa0937120 | AT4G02570.1 | 32.106 | 679 | 346 | 17 | 44 | 620 | 42 | 707 | 1.07e-91 | 299 |
| Msa0937120 | AT4G02570.3 | 32.106 | 679 | 346 | 17 | 44 | 620 | 42 | 707 | 1.07e-91 | 299 |
| Msa0937120 | AT1G02980.1 | 30.028 | 716 | 375 | 22 | 18 | 620 | 9 | 711 | 5.64e-77 | 260 |
| Msa0937120 | AT1G02980.2 | 30.028 | 716 | 375 | 22 | 18 | 620 | 9 | 711 | 5.64e-77 | 260 |
| Msa0937120 | AT1G43140.1 | 29.445 | 703 | 366 | 21 | 18 | 620 | 18 | 690 | 1.31e-70 | 243 |
| Msa0937120 | AT1G59790.2 | 29.297 | 256 | 136 | 9 | 44 | 261 | 48 | 296 | 2.37e-19 | 90.9 |
| Msa0937120 | AT1G59790.1 | 29.183 | 257 | 137 | 9 | 43 | 261 | 47 | 296 | 3.16e-19 | 90.5 |
| Msa0937120 | AT1G59800.1 | 33.607 | 122 | 76 | 2 | 100 | 218 | 125 | 244 | 1.31e-14 | 74.7 |
Find 132 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAATGAACTCTGGAAAT+TGG | 0.157589 | 6_3:-8216812 | None:intergenic |
| ATTAAAGATGCTAATGGATT+TGG | 0.182840 | 6_3:+8216232 | Msa0937120:CDS |
| AATATGGTGCAGCATAAATT+TGG | 0.207628 | 6_3:+8215864 | Msa0937120:CDS |
| CTAACTTTGAAGAGCTTTAC+AGG | 0.217796 | 6_3:+8215511 | Msa0937120:CDS |
| AAACTTCGCAGAGGGTTAAA+AGG | 0.239559 | 6_3:+8216849 | Msa0937120:CDS |
| CTTCCACATTCCTTTCTCTA+AGG | 0.288886 | 6_3:-8216181 | None:intergenic |
| CTGTAAAGCTCTTCAAAGTT+AGG | 0.301958 | 6_3:-8215510 | None:intergenic |
| TTGGATTTGAAGGATAAATA+TGG | 0.302868 | 6_3:+8216702 | Msa0937120:intron |
| TCAATTCACTTCTAAGTTAG+AGG | 0.310239 | 6_3:+8217058 | Msa0937120:CDS |
| ACAATTGCTGCCTCAATTTG+TGG | 0.310454 | 6_3:-8217674 | None:intergenic |
| AAACATTCAGCTCATGCTTC+TGG | 0.323833 | 6_3:-8217340 | None:intergenic |
| AATGATCCTCAAAGTCCTTC+TGG | 0.328880 | 6_3:-8216268 | None:intergenic |
| CTTGAGCAGATTCAATTGAT+TGG | 0.335471 | 6_3:-8215944 | None:intergenic |
| ATATGGTGCAGCATAAATTT+GGG | 0.338195 | 6_3:+8215865 | Msa0937120:CDS |
| TTAAAGATGCTAATGGATTT+GGG | 0.339423 | 6_3:+8216233 | Msa0937120:CDS |
| GTTTCTCGGAGGAGCTTAAC+AGG | 0.340101 | 6_3:+8215973 | Msa0937120:CDS |
| GCATTTGGTAATGCTACATT+TGG | 0.348730 | 6_3:+8217311 | Msa0937120:CDS |
| TCTTTAATAAGTTCCTCATT+AGG | 0.362232 | 6_3:-8216217 | None:intergenic |
| ATGAACTTGGTATGAATCTA+TGG | 0.369624 | 6_3:+8216093 | Msa0937120:CDS |
| GTAAGAAACACCTAGCAAAA+AGG | 0.372779 | 6_3:+8216961 | Msa0937120:CDS |
| GAACTTATTAAAGATGCTAA+TGG | 0.373956 | 6_3:+8216226 | Msa0937120:CDS |
| AGAGTTCATTTCTTTGTTTG+TGG | 0.376000 | 6_3:+8216821 | Msa0937120:CDS |
| CTAGCAAGCTCTTCAAGTTA+AGG | 0.377150 | 6_3:+8217573 | Msa0937120:CDS |
| GTTCAGGAATGCATATAATA+TGG | 0.383971 | 6_3:+8215848 | Msa0937120:intron |
| GGCAGAGAGTGGAGGAAGAT+AGG | 0.394712 | 6_3:+8217648 | Msa0937120:CDS |
| GGAAGATTACATTGCGGACT+AGG | 0.395922 | 6_3:-8217209 | None:intergenic |
| GTGCCTTCAGTCGTTGGCCT+TGG | 0.405272 | 6_3:+8217466 | Msa0937120:CDS |
| CAAACACATCCTTCTCTTGA+AGG | 0.405640 | 6_3:-8216929 | None:intergenic |
| TTGAGCAGATTCAATTGATT+GGG | 0.408436 | 6_3:-8215943 | None:intergenic |
| AGAGTTGTTTAAATGAAGAA+AGG | 0.411293 | 6_3:+8216378 | Msa0937120:CDS |
| AGCATCTCATGGTGCTGAGT+TGG | 0.421446 | 6_3:+8217130 | Msa0937120:CDS |
| TTCATACCAAGTTCATGAAC+GGG | 0.422315 | 6_3:-8216086 | None:intergenic |
| AGAAATGAACTCTGGAAATT+GGG | 0.423164 | 6_3:-8216811 | None:intergenic |
| GCATCTCATGGTGCTGAGTT+GGG | 0.426946 | 6_3:+8217131 | Msa0937120:CDS |
| CAGTCGTTGGCCTTGGTCAA+AGG | 0.440000 | 6_3:+8217473 | Msa0937120:CDS |
| CAAGGTTTCTTAGCATCTCA+TGG | 0.447471 | 6_3:+8217119 | Msa0937120:CDS |
| AAAAGATGATTGAAAATCAT+AGG | 0.447654 | 6_3:+8216462 | Msa0937120:CDS |
| AGATTGTCGTGGCATGCATT+TGG | 0.448848 | 6_3:+8217296 | Msa0937120:CDS |
| TGGTAATGCTACATTTGGTA+AGG | 0.449370 | 6_3:+8217316 | Msa0937120:CDS |
| TAGTCTTAGTTTCGTTGGAA+TGG | 0.456375 | 6_3:-8216130 | None:intergenic |
| CTGCAGCTGCTTTGTGACCT+CGG | 0.459363 | 6_3:-8217744 | None:intergenic |
| AAGCCTAGTCTTAGTTTCGT+TGG | 0.459518 | 6_3:-8216135 | None:intergenic |
| CGGGACTGTTGTTGCACAAA+GGG | 0.463244 | 6_3:+8217598 | Msa0937120:CDS |
| TCTGTCCAGGTGCTTACAAC+AGG | 0.465386 | 6_3:+8217170 | Msa0937120:CDS |
| TTGACCTCGTCCTTAGAGAA+AGG | 0.465724 | 6_3:+8216171 | Msa0937120:CDS |
| AAAATCCCCGTTCATGAACT+TGG | 0.466372 | 6_3:+8216080 | Msa0937120:CDS |
| GACAAAATAACAACACGATT+AGG | 0.468340 | 6_3:-8217779 | None:intergenic |
| AAGTTTCGTATTTATTATCT+CGG | 0.473025 | 6_3:+8217257 | Msa0937120:CDS |
| GAGTTGTTTAAATGAAGAAA+GGG | 0.473217 | 6_3:+8216379 | Msa0937120:CDS |
| AGTCGTTGGCCTTGGTCAAA+GGG | 0.473393 | 6_3:+8217474 | Msa0937120:CDS |
| ATGTTCAAATACAGAATTCA+AGG | 0.474674 | 6_3:-8216772 | None:intergenic |
| TGTTTACCAGAAGGACTTTG+AGG | 0.474733 | 6_3:+8216262 | Msa0937120:CDS |
| TGCTCAAGGAGAAAGTTTCT+CGG | 0.479661 | 6_3:+8215959 | Msa0937120:CDS |
| AATTTCTTTAACGATGAAGA+AGG | 0.487881 | 6_3:+8215383 | None:intergenic |
| AGGTGCTTACAACAGGTTCA+TGG | 0.492266 | 6_3:+8217177 | Msa0937120:CDS |
| TGAGTCAAAGATAACTAGTC+TGG | 0.492731 | 6_3:+8216433 | Msa0937120:CDS |
| TGTAAAGCTCTTCAAAGTTA+GGG | 0.493460 | 6_3:-8215509 | None:intergenic |
| CAAACTTCTTTCTGCCTCAT+CGG | 0.495929 | 6_3:-8217006 | None:intergenic |
| AGCTCTTCAAGTTAAGGATC+GGG | 0.499619 | 6_3:+8217579 | Msa0937120:CDS |
| TCAACTACGTCCTTACTCAT+TGG | 0.501430 | 6_3:-8217518 | None:intergenic |
| AACTTCGCAGAGGGTTAAAA+GGG | 0.502046 | 6_3:+8216850 | Msa0937120:CDS |
| CGAGGTCACAAAGCAGCTGC+AGG | 0.503683 | 6_3:+8217745 | Msa0937120:CDS |
| GAAGAGGTGCCTTCAGTCGT+TGG | 0.504097 | 6_3:+8217460 | Msa0937120:CDS |
| CATTGCGGACTAGGTTGAGT+TGG | 0.504999 | 6_3:-8217200 | None:intergenic |
| TCGGAAAGAGCCAATGAGTA+AGG | 0.505271 | 6_3:+8217508 | Msa0937120:CDS |
| CATCCATGAGCATATTAACT+AGG | 0.508325 | 6_3:-8216514 | None:intergenic |
| CGCAGAGGGTTAAAAGGGAC+TGG | 0.517112 | 6_3:+8216855 | Msa0937120:CDS |
| GGAGAGAGTATCTCACTACT+TGG | 0.519528 | 6_3:+8216400 | Msa0937120:CDS |
| TTGTGAGGGTAATGAAATCC+AGG | 0.537815 | 6_3:+8217693 | Msa0937120:CDS |
| GCTCATGGATGACAAGTATG+AGG | 0.538860 | 6_3:+8216526 | Msa0937120:CDS |
| ACAAACAAAGAAATGAACTC+TGG | 0.540439 | 6_3:-8216819 | None:intergenic |
| AGATAGGAAGCCACAAATTG+AGG | 0.542261 | 6_3:+8217664 | Msa0937120:CDS |
| AGTTAGAATCCACCACTTCA+CGG | 0.542530 | 6_3:-8215419 | None:intergenic |
| AGTCCTAGTTAATATGCTCA+TGG | 0.546980 | 6_3:+8216511 | Msa0937120:CDS |
| TTGTTTCAGATGAGAAGTCA+TGG | 0.547857 | 6_3:-8215916 | None:intergenic |
| TGCTGATCGGATGACTTGTA+AGG | 0.549561 | 6_3:+8217400 | Msa0937120:CDS |
| TTTGAGGTACCTTCAAGAGA+AGG | 0.550938 | 6_3:+8216920 | Msa0937120:CDS |
| AAGCTCTTCAAGTTAAGGAT+CGG | 0.551687 | 6_3:+8217578 | Msa0937120:CDS |
| TATAGAAACTCGGCAGAGAG+TGG | 0.552212 | 6_3:+8217637 | Msa0937120:CDS |
| TACTCATGTCAGACTTGAAG+AGG | 0.552320 | 6_3:+8217444 | Msa0937120:CDS |
| GGTAATGCTACATTTGGTAA+GGG | 0.553253 | 6_3:+8217317 | Msa0937120:CDS |
| ACTTCTTATGATATGTTGCA+AGG | 0.553570 | 6_3:+8217101 | Msa0937120:CDS |
| GTTAAAAGGGACTGGTGAGG+AGG | 0.554508 | 6_3:+8216863 | Msa0937120:CDS |
| CATAAACCTCGGATTTCAGA+TGG | 0.554525 | 6_3:-8217230 | None:intergenic |
| AAAGCATTAGTACACACATC+TGG | 0.555795 | 6_3:-8217370 | None:intergenic |
| CTTAAGCTCAAAACAGAATG+TGG | 0.557946 | 6_3:+8217032 | Msa0937120:CDS |
| CATTCCTTTCTCTAAGGACG+AGG | 0.557975 | 6_3:-8216175 | None:intergenic |
| TAGCCCTACACTATCTGTCC+AGG | 0.560211 | 6_3:+8217157 | Msa0937120:CDS |
| CAATTCACTTCTAAGTTAGA+GGG | 0.560970 | 6_3:+8217059 | Msa0937120:CDS |
| TGACCAAGGCCAACGACTGA+AGG | 0.564547 | 6_3:-8217469 | None:intergenic |
| CAATGAATCTTGTGATTGCG+AGG | 0.565035 | 6_3:+8216337 | Msa0937120:CDS |
| ATGAACCTGTTGTAAGCACC+TGG | 0.566331 | 6_3:-8217175 | None:intergenic |
| CTTTAACGATGAAGAAGGGA+CGG | 0.571878 | 6_3:+8215388 | None:intergenic |
| TTTGGGGAGAAACTTTACAC+TGG | 0.572596 | 6_3:+8215882 | Msa0937120:CDS |
| ATTATGTTCTAAAACCCGCC+TGG | 0.580759 | 6_3:-8217711 | None:intergenic |
| CAATCAATTGAATCTGCTCA+AGG | 0.585187 | 6_3:+8215945 | Msa0937120:CDS |
| TGGATGACAAACTTCGCAGA+GGG | 0.588805 | 6_3:+8216841 | Msa0937120:CDS |
| ATATACAATCATAATGCTAG+TGG | 0.588882 | 6_3:+8215486 | Msa0937120:CDS |
| AATGAGTAAGGACGTAGTTG+AGG | 0.591712 | 6_3:+8217520 | Msa0937120:CDS |
| ATTCATACCAAGTTCATGAA+CGG | 0.592789 | 6_3:-8216087 | None:intergenic |
| ATTTCTTTAACGATGAAGAA+GGG | 0.593063 | 6_3:+8215384 | None:intergenic |
| GTCAAAGATAACTAGTCTGG+TGG | 0.598671 | 6_3:+8216436 | Msa0937120:CDS |
| TAATTAACAGAGGCCTAATG+AGG | 0.600832 | 6_3:+8216204 | Msa0937120:CDS |
| TATGGTGCAGCATAAATTTG+GGG | 0.612393 | 6_3:+8215866 | Msa0937120:CDS |
| GAGGGTAATGAAATCCAGGC+GGG | 0.612463 | 6_3:+8217697 | Msa0937120:CDS |
| GACTTGTAAGGAGATAGAGC+AGG | 0.614296 | 6_3:+8217412 | Msa0937120:CDS |
| TCGGGACTGTTGTTGCACAA+AGG | 0.614460 | 6_3:+8217597 | Msa0937120:CDS |
| GGGTTCGTCTGTTTACCAGA+AGG | 0.615443 | 6_3:+8216253 | Msa0937120:CDS |
| GTTTGTGAACCGTGAAGTGG+TGG | 0.616221 | 6_3:+8215410 | Msa0937120:CDS |
| AAATTGAGGCAGCAATTGTG+AGG | 0.617528 | 6_3:+8217678 | Msa0937120:CDS |
| TTTGAAGGATAAATATGGCG+AGG | 0.633005 | 6_3:+8216707 | Msa0937120:intron |
| AGAAACTCGGCAGAGAGTGG+AGG | 0.637990 | 6_3:+8217640 | Msa0937120:CDS |
| AACCAGAAAATATAGAAACT+CGG | 0.640392 | 6_3:+8217627 | Msa0937120:CDS |
| ATTCCAACGAAACTAAGACT+AGG | 0.642242 | 6_3:+8216132 | Msa0937120:CDS |
| GAAACTTCTCACATAAACCT+CGG | 0.645109 | 6_3:-8217241 | None:intergenic |
| AATCTTCCATCTGAAATCCG+AGG | 0.657161 | 6_3:+8217224 | Msa0937120:CDS |
| AGGGTTAAAAGGGACTGGTG+AGG | 0.657756 | 6_3:+8216860 | Msa0937120:CDS |
| CGTCCTTAGAGAAAGGAATG+TGG | 0.659752 | 6_3:+8216178 | Msa0937120:CDS |
| ATATGGCGAGGTTATCACAA+AGG | 0.663242 | 6_3:+8216719 | Msa0937120:CDS |
| AATTGAGGCAGCAATTGTGA+GGG | 0.673825 | 6_3:+8217679 | Msa0937120:CDS |
| TATTATCTCGGCGCTCACAG+TGG | 0.674761 | 6_3:+8217269 | Msa0937120:CDS |
| GTGGATGACAAACTTCGCAG+AGG | 0.678039 | 6_3:+8216840 | Msa0937120:CDS |
| ACGGTTTGTGAACCGTGAAG+TGG | 0.680900 | 6_3:+8215407 | Msa0937120:CDS |
| AGCACCTGGACAGATAGTGT+AGG | 0.681962 | 6_3:-8217161 | None:intergenic |
| ACATAATAATGTCATCGCCG+AGG | 0.682843 | 6_3:+8217727 | Msa0937120:CDS |
| AATGTGGAAGTAATTAACAG+AGG | 0.688801 | 6_3:+8216194 | Msa0937120:CDS |
| GGGGAAGACTGTATCCGATG+AGG | 0.696748 | 6_3:+8216992 | Msa0937120:CDS |
| TCATACCAAGTTCATGAACG+GGG | 0.704763 | 6_3:-8216085 | None:intergenic |
| TCAGATGGAAGATTACATTG+CGG | 0.706660 | 6_3:-8217215 | None:intergenic |
| TGAGGGTAATGAAATCCAGG+CGG | 0.724523 | 6_3:+8217696 | Msa0937120:CDS |
| TCAAGGAGAAAGTTTCTCGG+AGG | 0.732240 | 6_3:+8215962 | Msa0937120:CDS |
| ACAGTGGTAGGAGATTGTCG+TGG | 0.773650 | 6_3:+8217285 | Msa0937120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAGTTTATAATATTTATT+TGG | - | chr6_3:8215776-8215795 | None:intergenic | 10.0% |
| !! | CAAAGTTTATAATATTTATT+TGG | - | chr6_3:8215776-8215795 | None:intergenic | 10.0% |
| !!! | TGAATTTTAAACAAATCATT+CGG | + | chr6_3:8215637-8215656 | Msa0937120:intron | 15.0% |
| !!! | TGAATTTTAAACAAATCATT+CGG | + | chr6_3:8215637-8215656 | Msa0937120:intron | 15.0% |
| !!! | GAATTTTAAACAAATCATTC+GGG | + | chr6_3:8215638-8215657 | Msa0937120:intron | 20.0% |
| !! | AAAAGATGATTGAAAATCAT+AGG | + | chr6_3:8216462-8216481 | Msa0937120:CDS | 20.0% |
| !!! | ACATGATGATTTCTTTTATA+CGG | + | chr6_3:8216609-8216628 | Msa0937120:intron | 20.0% |
| !! | AAGTTTCGTATTTATTATCT+CGG | + | chr6_3:8217257-8217276 | Msa0937120:CDS | 20.0% |
| !!! | GAATTTTAAACAAATCATTC+GGG | + | chr6_3:8215638-8215657 | Msa0937120:intron | 20.0% |
| !! | AAAAGATGATTGAAAATCAT+AGG | + | chr6_3:8216462-8216481 | Msa0937120:CDS | 20.0% |
| !!! | ACATGATGATTTCTTTTATA+CGG | + | chr6_3:8216609-8216628 | Msa0937120:intron | 20.0% |
| !! | AAGTTTCGTATTTATTATCT+CGG | + | chr6_3:8217257-8217276 | Msa0937120:CDS | 20.0% |
| ! | ATATACAATCATAATGCTAG+TGG | + | chr6_3:8215486-8215505 | Msa0937120:CDS | 25.0% |
| !! | ATTTTCTTCTCAAGATGATA+TGG | + | chr6_3:8215570-8215589 | Msa0937120:intron | 25.0% |
| ! | TAATATAAAGTTCAGCATGA+AGG | - | chr6_3:8215716-8215735 | None:intergenic | 25.0% |
| !! | TTATTTCCAATGCTTTGTTA+TGG | - | chr6_3:8216010-8216029 | None:intergenic | 25.0% |
| ! | TCTTTAATAAGTTCCTCATT+AGG | - | chr6_3:8216220-8216239 | None:intergenic | 25.0% |
| ! | GAACTTATTAAAGATGCTAA+TGG | + | chr6_3:8216226-8216245 | Msa0937120:CDS | 25.0% |
| !!! | ATTAAAGATGCTAATGGATT+TGG | + | chr6_3:8216232-8216251 | Msa0937120:CDS | 25.0% |
| !!! | TTAAAGATGCTAATGGATTT+GGG | + | chr6_3:8216233-8216252 | Msa0937120:CDS | 25.0% |
| ! | AGAGTTGTTTAAATGAAGAA+AGG | + | chr6_3:8216378-8216397 | Msa0937120:CDS | 25.0% |
| ! | GAGTTGTTTAAATGAAGAAA+GGG | + | chr6_3:8216379-8216398 | Msa0937120:CDS | 25.0% |
| !!! | AATGTATAACTTGTTTTGCA+AGG | + | chr6_3:8216559-8216578 | Msa0937120:CDS | 25.0% |
| ! | TTGGATTTGAAGGATAAATA+TGG | + | chr6_3:8216702-8216721 | Msa0937120:intron | 25.0% |
| ! | ATGTTCAAATACAGAATTCA+AGG | - | chr6_3:8216775-8216794 | None:intergenic | 25.0% |
| ! | AACCAGAAAATATAGAAACT+CGG | + | chr6_3:8217627-8217646 | Msa0937120:CDS | 25.0% |
| ! | ATATACAATCATAATGCTAG+TGG | + | chr6_3:8215486-8215505 | Msa0937120:CDS | 25.0% |
| !! | ATTTTCTTCTCAAGATGATA+TGG | + | chr6_3:8215570-8215589 | Msa0937120:intron | 25.0% |
| ! | TAATATAAAGTTCAGCATGA+AGG | - | chr6_3:8215716-8215735 | None:intergenic | 25.0% |
| !! | TTATTTCCAATGCTTTGTTA+TGG | - | chr6_3:8216010-8216029 | None:intergenic | 25.0% |
| ! | TCTTTAATAAGTTCCTCATT+AGG | - | chr6_3:8216220-8216239 | None:intergenic | 25.0% |
| ! | GAACTTATTAAAGATGCTAA+TGG | + | chr6_3:8216226-8216245 | Msa0937120:CDS | 25.0% |
| !!! | ATTAAAGATGCTAATGGATT+TGG | + | chr6_3:8216232-8216251 | Msa0937120:CDS | 25.0% |
| !!! | TTAAAGATGCTAATGGATTT+GGG | + | chr6_3:8216233-8216252 | Msa0937120:CDS | 25.0% |
| ! | AGAGTTGTTTAAATGAAGAA+AGG | + | chr6_3:8216378-8216397 | Msa0937120:CDS | 25.0% |
| ! | GAGTTGTTTAAATGAAGAAA+GGG | + | chr6_3:8216379-8216398 | Msa0937120:CDS | 25.0% |
| !!! | AATGTATAACTTGTTTTGCA+AGG | + | chr6_3:8216559-8216578 | Msa0937120:CDS | 25.0% |
| ! | TTGGATTTGAAGGATAAATA+TGG | + | chr6_3:8216702-8216721 | Msa0937120:intron | 25.0% |
| ! | ATGTTCAAATACAGAATTCA+AGG | - | chr6_3:8216775-8216794 | None:intergenic | 25.0% |
| ! | AACCAGAAAATATAGAAACT+CGG | + | chr6_3:8217627-8217646 | Msa0937120:CDS | 25.0% |
| TGTAAAGCTCTTCAAAGTTA+GGG | - | chr6_3:8215512-8215531 | None:intergenic | 30.0% | |
| CATCTTGAGAAGAAAATTGA+AGG | - | chr6_3:8215567-8215586 | None:intergenic | 30.0% | |
| GTTCAGGAATGCATATAATA+TGG | + | chr6_3:8215848-8215867 | Msa0937120:intron | 30.0% | |
| AATATGGTGCAGCATAAATT+TGG | + | chr6_3:8215864-8215883 | Msa0937120:CDS | 30.0% | |
| ATATGGTGCAGCATAAATTT+GGG | + | chr6_3:8215865-8215884 | Msa0937120:CDS | 30.0% | |
| TTGAGCAGATTCAATTGATT+GGG | - | chr6_3:8215946-8215965 | None:intergenic | 30.0% | |
| ATTCATACCAAGTTCATGAA+CGG | - | chr6_3:8216090-8216109 | None:intergenic | 30.0% | |
| ATGAACTTGGTATGAATCTA+TGG | + | chr6_3:8216093-8216112 | Msa0937120:CDS | 30.0% | |
| AATGTGGAAGTAATTAACAG+AGG | + | chr6_3:8216194-8216213 | Msa0937120:CDS | 30.0% | |
| ATAACAATTGTAAGTGCAGA+TGG | - | chr6_3:8216587-8216606 | None:intergenic | 30.0% | |
| ! | AGAAATGAACTCTGGAAATT+GGG | - | chr6_3:8216814-8216833 | None:intergenic | 30.0% |
| ! | AAGAAATGAACTCTGGAAAT+TGG | - | chr6_3:8216815-8216834 | None:intergenic | 30.0% |
| ACAAACAAAGAAATGAACTC+TGG | - | chr6_3:8216822-8216841 | None:intergenic | 30.0% | |
| ! | AGAGTTCATTTCTTTGTTTG+TGG | + | chr6_3:8216821-8216840 | Msa0937120:CDS | 30.0% |
| TCAATTCACTTCTAAGTTAG+AGG | + | chr6_3:8217058-8217077 | Msa0937120:CDS | 30.0% | |
| CAATTCACTTCTAAGTTAGA+GGG | + | chr6_3:8217059-8217078 | Msa0937120:CDS | 30.0% | |
| ACTTCTTATGATATGTTGCA+AGG | + | chr6_3:8217101-8217120 | Msa0937120:CDS | 30.0% | |
| TCAAAGGGAAAAATGTTCTT+CGG | + | chr6_3:8217489-8217508 | Msa0937120:CDS | 30.0% | |
| GACAAAATAACAACACGATT+AGG | - | chr6_3:8217782-8217801 | None:intergenic | 30.0% | |
| TGTAAAGCTCTTCAAAGTTA+GGG | - | chr6_3:8215512-8215531 | None:intergenic | 30.0% | |
| CATCTTGAGAAGAAAATTGA+AGG | - | chr6_3:8215567-8215586 | None:intergenic | 30.0% | |
| GTTCAGGAATGCATATAATA+TGG | + | chr6_3:8215848-8215867 | Msa0937120:intron | 30.0% | |
| AATATGGTGCAGCATAAATT+TGG | + | chr6_3:8215864-8215883 | Msa0937120:CDS | 30.0% | |
| ATATGGTGCAGCATAAATTT+GGG | + | chr6_3:8215865-8215884 | Msa0937120:CDS | 30.0% | |
| TTGAGCAGATTCAATTGATT+GGG | - | chr6_3:8215946-8215965 | None:intergenic | 30.0% | |
| ATTCATACCAAGTTCATGAA+CGG | - | chr6_3:8216090-8216109 | None:intergenic | 30.0% | |
| ATGAACTTGGTATGAATCTA+TGG | + | chr6_3:8216093-8216112 | Msa0937120:CDS | 30.0% | |
| AATGTGGAAGTAATTAACAG+AGG | + | chr6_3:8216194-8216213 | Msa0937120:CDS | 30.0% | |
| ATAACAATTGTAAGTGCAGA+TGG | - | chr6_3:8216587-8216606 | None:intergenic | 30.0% | |
| ! | AGAAATGAACTCTGGAAATT+GGG | - | chr6_3:8216814-8216833 | None:intergenic | 30.0% |
| ! | AAGAAATGAACTCTGGAAAT+TGG | - | chr6_3:8216815-8216834 | None:intergenic | 30.0% |
| ACAAACAAAGAAATGAACTC+TGG | - | chr6_3:8216822-8216841 | None:intergenic | 30.0% | |
| ! | AGAGTTCATTTCTTTGTTTG+TGG | + | chr6_3:8216821-8216840 | Msa0937120:CDS | 30.0% |
| TCAATTCACTTCTAAGTTAG+AGG | + | chr6_3:8217058-8217077 | Msa0937120:CDS | 30.0% | |
| CAATTCACTTCTAAGTTAGA+GGG | + | chr6_3:8217059-8217078 | Msa0937120:CDS | 30.0% | |
| ACTTCTTATGATATGTTGCA+AGG | + | chr6_3:8217101-8217120 | Msa0937120:CDS | 30.0% | |
| TCAAAGGGAAAAATGTTCTT+CGG | + | chr6_3:8217489-8217508 | Msa0937120:CDS | 30.0% | |
| GACAAAATAACAACACGATT+AGG | - | chr6_3:8217782-8217801 | None:intergenic | 30.0% | |
| CTAACTATGCTGAAAAAACG+TGG | + | chr6_3:8215436-8215455 | Msa0937120:CDS | 35.0% | |
| CTGTAAAGCTCTTCAAAGTT+AGG | - | chr6_3:8215513-8215532 | None:intergenic | 35.0% | |
| ! | CTAACTTTGAAGAGCTTTAC+AGG | + | chr6_3:8215511-8215530 | Msa0937120:CDS | 35.0% |
| AGCATGAAGGTAAGTAAAGT+CGG | - | chr6_3:8215703-8215722 | None:intergenic | 35.0% | |
| TGATCATCATTTGTCTGTTC+AGG | + | chr6_3:8215832-8215851 | Msa0937120:intron | 35.0% | |
| TATGGTGCAGCATAAATTTG+GGG | + | chr6_3:8215866-8215885 | Msa0937120:CDS | 35.0% | |
| TTGTTTCAGATGAGAAGTCA+TGG | - | chr6_3:8215919-8215938 | None:intergenic | 35.0% | |
| CTTGAGCAGATTCAATTGAT+TGG | - | chr6_3:8215947-8215966 | None:intergenic | 35.0% | |
| CAATCAATTGAATCTGCTCA+AGG | + | chr6_3:8215945-8215964 | Msa0937120:CDS | 35.0% | |
| CCATGTACATTAGTATGTCT+CGG | - | chr6_3:8216034-8216053 | None:intergenic | 35.0% | |
| TTCATACCAAGTTCATGAAC+GGG | - | chr6_3:8216089-8216108 | None:intergenic | 35.0% | |
| ! | TAGTCTTAGTTTCGTTGGAA+TGG | - | chr6_3:8216133-8216152 | None:intergenic | 35.0% |
| ATTCCAACGAAACTAAGACT+AGG | + | chr6_3:8216132-8216151 | Msa0937120:CDS | 35.0% | |
| TAATTAACAGAGGCCTAATG+AGG | + | chr6_3:8216204-8216223 | Msa0937120:CDS | 35.0% | |
| !! | CTTTGAGGATCATTTTCTTG+AGG | + | chr6_3:8216277-8216296 | Msa0937120:CDS | 35.0% |
| TGAGTCAAAGATAACTAGTC+TGG | + | chr6_3:8216433-8216452 | Msa0937120:CDS | 35.0% | |
| AGTCCTAGTTAATATGCTCA+TGG | + | chr6_3:8216511-8216530 | Msa0937120:CDS | 35.0% | |
| CATCCATGAGCATATTAACT+AGG | - | chr6_3:8216517-8216536 | None:intergenic | 35.0% | |
| TACCAATGAGCAGTTAGTTA+TGG | + | chr6_3:8216635-8216654 | Msa0937120:intron | 35.0% | |
| ATCCATAACTAACTGCTCAT+TGG | - | chr6_3:8216640-8216659 | None:intergenic | 35.0% | |
| AGTTAGTTATGGATCCTGAA+AGG | + | chr6_3:8216646-8216665 | Msa0937120:intron | 35.0% | |
| ! | CGATTTTGTGCAATGTCTTT+TGG | + | chr6_3:8216683-8216702 | Msa0937120:intron | 35.0% |
| ! | GCAATGTCTTTTGGATTTGA+AGG | + | chr6_3:8216692-8216711 | Msa0937120:intron | 35.0% |
| TTTGAAGGATAAATATGGCG+AGG | + | chr6_3:8216707-8216726 | Msa0937120:intron | 35.0% | |
| ! | ACAAAGTCATGATGCTTTTG+AGG | + | chr6_3:8216904-8216923 | Msa0937120:CDS | 35.0% |
| GTAAGAAACACCTAGCAAAA+AGG | + | chr6_3:8216961-8216980 | Msa0937120:CDS | 35.0% | |
| CTTAAGCTCAAAACAGAATG+TGG | + | chr6_3:8217032-8217051 | Msa0937120:CDS | 35.0% | |
| TCAGATGGAAGATTACATTG+CGG | - | chr6_3:8217218-8217237 | None:intergenic | 35.0% | |
| GAAACTTCTCACATAAACCT+CGG | - | chr6_3:8217244-8217263 | None:intergenic | 35.0% | |
| !! | GCATTTGGTAATGCTACATT+TGG | + | chr6_3:8217311-8217330 | Msa0937120:CDS | 35.0% |
| ! | TGGTAATGCTACATTTGGTA+AGG | + | chr6_3:8217316-8217335 | Msa0937120:CDS | 35.0% |
| GGTAATGCTACATTTGGTAA+GGG | + | chr6_3:8217317-8217336 | Msa0937120:CDS | 35.0% | |
| ! | AAAGCATTAGTACACACATC+TGG | - | chr6_3:8217373-8217392 | None:intergenic | 35.0% |
| ! | TGCTTTTCAACAATGCTGAT+CGG | + | chr6_3:8217387-8217406 | Msa0937120:CDS | 35.0% |
| ! | AACATTTTTCCCTTTGACCA+AGG | - | chr6_3:8217486-8217505 | None:intergenic | 35.0% |
| !! | GATGATGCATTTGTTTTCGA+CGG | + | chr6_3:8217542-8217561 | Msa0937120:CDS | 35.0% |
| ! | AAGCTCTTCAAGTTAAGGAT+CGG | + | chr6_3:8217578-8217597 | Msa0937120:CDS | 35.0% |
| ! | TGCCGAGTTTCTATATTTTC+TGG | - | chr6_3:8217632-8217651 | None:intergenic | 35.0% |
| CTAACTATGCTGAAAAAACG+TGG | + | chr6_3:8215436-8215455 | Msa0937120:CDS | 35.0% | |
| CTGTAAAGCTCTTCAAAGTT+AGG | - | chr6_3:8215513-8215532 | None:intergenic | 35.0% | |
| ! | CTAACTTTGAAGAGCTTTAC+AGG | + | chr6_3:8215511-8215530 | Msa0937120:CDS | 35.0% |
| AGCATGAAGGTAAGTAAAGT+CGG | - | chr6_3:8215703-8215722 | None:intergenic | 35.0% | |
| TGATCATCATTTGTCTGTTC+AGG | + | chr6_3:8215832-8215851 | Msa0937120:intron | 35.0% | |
| TATGGTGCAGCATAAATTTG+GGG | + | chr6_3:8215866-8215885 | Msa0937120:CDS | 35.0% | |
| TTGTTTCAGATGAGAAGTCA+TGG | - | chr6_3:8215919-8215938 | None:intergenic | 35.0% | |
| CTTGAGCAGATTCAATTGAT+TGG | - | chr6_3:8215947-8215966 | None:intergenic | 35.0% | |
| CAATCAATTGAATCTGCTCA+AGG | + | chr6_3:8215945-8215964 | Msa0937120:CDS | 35.0% | |
| CCATGTACATTAGTATGTCT+CGG | - | chr6_3:8216034-8216053 | None:intergenic | 35.0% | |
| TTCATACCAAGTTCATGAAC+GGG | - | chr6_3:8216089-8216108 | None:intergenic | 35.0% | |
| ! | TAGTCTTAGTTTCGTTGGAA+TGG | - | chr6_3:8216133-8216152 | None:intergenic | 35.0% |
| ATTCCAACGAAACTAAGACT+AGG | + | chr6_3:8216132-8216151 | Msa0937120:CDS | 35.0% | |
| TAATTAACAGAGGCCTAATG+AGG | + | chr6_3:8216204-8216223 | Msa0937120:CDS | 35.0% | |
| !! | CTTTGAGGATCATTTTCTTG+AGG | + | chr6_3:8216277-8216296 | Msa0937120:CDS | 35.0% |
| TGAGTCAAAGATAACTAGTC+TGG | + | chr6_3:8216433-8216452 | Msa0937120:CDS | 35.0% | |
| AGTCCTAGTTAATATGCTCA+TGG | + | chr6_3:8216511-8216530 | Msa0937120:CDS | 35.0% | |
| CATCCATGAGCATATTAACT+AGG | - | chr6_3:8216517-8216536 | None:intergenic | 35.0% | |
| TACCAATGAGCAGTTAGTTA+TGG | + | chr6_3:8216635-8216654 | Msa0937120:intron | 35.0% | |
| ATCCATAACTAACTGCTCAT+TGG | - | chr6_3:8216640-8216659 | None:intergenic | 35.0% | |
| AGTTAGTTATGGATCCTGAA+AGG | + | chr6_3:8216646-8216665 | Msa0937120:intron | 35.0% | |
| ! | CGATTTTGTGCAATGTCTTT+TGG | + | chr6_3:8216683-8216702 | Msa0937120:intron | 35.0% |
| ! | GCAATGTCTTTTGGATTTGA+AGG | + | chr6_3:8216692-8216711 | Msa0937120:intron | 35.0% |
| TTTGAAGGATAAATATGGCG+AGG | + | chr6_3:8216707-8216726 | Msa0937120:intron | 35.0% | |
| ! | ACAAAGTCATGATGCTTTTG+AGG | + | chr6_3:8216904-8216923 | Msa0937120:CDS | 35.0% |
| GTAAGAAACACCTAGCAAAA+AGG | + | chr6_3:8216961-8216980 | Msa0937120:CDS | 35.0% | |
| CTTAAGCTCAAAACAGAATG+TGG | + | chr6_3:8217032-8217051 | Msa0937120:CDS | 35.0% | |
| TCAGATGGAAGATTACATTG+CGG | - | chr6_3:8217218-8217237 | None:intergenic | 35.0% | |
| GAAACTTCTCACATAAACCT+CGG | - | chr6_3:8217244-8217263 | None:intergenic | 35.0% | |
| !! | GCATTTGGTAATGCTACATT+TGG | + | chr6_3:8217311-8217330 | Msa0937120:CDS | 35.0% |
| ! | TGGTAATGCTACATTTGGTA+AGG | + | chr6_3:8217316-8217335 | Msa0937120:CDS | 35.0% |
| GGTAATGCTACATTTGGTAA+GGG | + | chr6_3:8217317-8217336 | Msa0937120:CDS | 35.0% | |
| ! | AAAGCATTAGTACACACATC+TGG | - | chr6_3:8217373-8217392 | None:intergenic | 35.0% |
| ! | TGCTTTTCAACAATGCTGAT+CGG | + | chr6_3:8217387-8217406 | Msa0937120:CDS | 35.0% |
| ! | AACATTTTTCCCTTTGACCA+AGG | - | chr6_3:8217486-8217505 | None:intergenic | 35.0% |
| !! | GATGATGCATTTGTTTTCGA+CGG | + | chr6_3:8217542-8217561 | Msa0937120:CDS | 35.0% |
| ! | AAGCTCTTCAAGTTAAGGAT+CGG | + | chr6_3:8217578-8217597 | Msa0937120:CDS | 35.0% |
| ! | TGCCGAGTTTCTATATTTTC+TGG | - | chr6_3:8217632-8217651 | None:intergenic | 35.0% |
| AGTTAGAATCCACCACTTCA+CGG | - | chr6_3:8215422-8215441 | None:intergenic | 40.0% | |
| ACTAAAAACTACTCCAGCCA+TGG | - | chr6_3:8215680-8215699 | None:intergenic | 40.0% | |
| TTTGGGGAGAAACTTTACAC+TGG | + | chr6_3:8215882-8215901 | Msa0937120:CDS | 40.0% | |
| TGCTCAAGGAGAAAGTTTCT+CGG | + | chr6_3:8215959-8215978 | Msa0937120:CDS | 40.0% | |
| GGTAGACCATAACAAAGCAT+TGG | + | chr6_3:8216001-8216020 | Msa0937120:intron | 40.0% | |
| CCGAGACATACTAATGTACA+TGG | + | chr6_3:8216031-8216050 | Msa0937120:intron | 40.0% | |
| AAAATCCCCGTTCATGAACT+TGG | + | chr6_3:8216080-8216099 | Msa0937120:CDS | 40.0% | |
| TCATACCAAGTTCATGAACG+GGG | - | chr6_3:8216088-8216107 | None:intergenic | 40.0% | |
| !! | AAGCCTAGTCTTAGTTTCGT+TGG | - | chr6_3:8216138-8216157 | None:intergenic | 40.0% |
| CTTCCACATTCCTTTCTCTA+AGG | - | chr6_3:8216184-8216203 | None:intergenic | 40.0% | |
| TGTTTACCAGAAGGACTTTG+AGG | + | chr6_3:8216262-8216281 | Msa0937120:CDS | 40.0% | |
| AATGATCCTCAAAGTCCTTC+TGG | - | chr6_3:8216271-8216290 | None:intergenic | 40.0% | |
| CAATGAATCTTGTGATTGCG+AGG | + | chr6_3:8216337-8216356 | Msa0937120:CDS | 40.0% | |
| ! | GTCAAAGATAACTAGTCTGG+TGG | + | chr6_3:8216436-8216455 | Msa0937120:CDS | 40.0% |
| AGACATTGCACAAAATCGAC+AGG | - | chr6_3:8216681-8216700 | None:intergenic | 40.0% | |
| ATATGGCGAGGTTATCACAA+AGG | + | chr6_3:8216719-8216738 | Msa0937120:CDS | 40.0% | |
| AAACTTCGCAGAGGGTTAAA+AGG | + | chr6_3:8216849-8216868 | Msa0937120:CDS | 40.0% | |
| AACTTCGCAGAGGGTTAAAA+GGG | + | chr6_3:8216850-8216869 | Msa0937120:CDS | 40.0% | |
| ! | TTTGAGGTACCTTCAAGAGA+AGG | + | chr6_3:8216920-8216939 | Msa0937120:CDS | 40.0% |
| CAAACACATCCTTCTCTTGA+AGG | - | chr6_3:8216932-8216951 | None:intergenic | 40.0% | |
| CCTAGCAAAAAGGCTTCTTT+CGG | + | chr6_3:8216971-8216990 | Msa0937120:CDS | 40.0% | |
| CTAGCAAAAAGGCTTCTTTC+GGG | + | chr6_3:8216972-8216991 | Msa0937120:CDS | 40.0% | |
| TAGCAAAAAGGCTTCTTTCG+GGG | + | chr6_3:8216973-8216992 | Msa0937120:CDS | 40.0% | |
| CAAACTTCTTTCTGCCTCAT+CGG | - | chr6_3:8217009-8217028 | None:intergenic | 40.0% | |
| CAAGGTTTCTTAGCATCTCA+TGG | + | chr6_3:8217119-8217138 | Msa0937120:CDS | 40.0% | |
| ! | AATCTTCCATCTGAAATCCG+AGG | + | chr6_3:8217224-8217243 | Msa0937120:CDS | 40.0% |
| CATAAACCTCGGATTTCAGA+TGG | - | chr6_3:8217233-8217252 | None:intergenic | 40.0% | |
| AAACATTCAGCTCATGCTTC+TGG | - | chr6_3:8217343-8217362 | None:intergenic | 40.0% | |
| TACTCATGTCAGACTTGAAG+AGG | + | chr6_3:8217444-8217463 | Msa0937120:CDS | 40.0% | |
| TCAACTACGTCCTTACTCAT+TGG | - | chr6_3:8217521-8217540 | None:intergenic | 40.0% | |
| AATGAGTAAGGACGTAGTTG+AGG | + | chr6_3:8217520-8217539 | Msa0937120:CDS | 40.0% | |
| ! | CTAGCAAGCTCTTCAAGTTA+AGG | + | chr6_3:8217573-8217592 | Msa0937120:CDS | 40.0% |
| ! | AGCTCTTCAAGTTAAGGATC+GGG | + | chr6_3:8217579-8217598 | Msa0937120:CDS | 40.0% |
| AGATAGGAAGCCACAAATTG+AGG | + | chr6_3:8217664-8217683 | Msa0937120:CDS | 40.0% | |
| ACAATTGCTGCCTCAATTTG+TGG | - | chr6_3:8217677-8217696 | None:intergenic | 40.0% | |
| AAATTGAGGCAGCAATTGTG+AGG | + | chr6_3:8217678-8217697 | Msa0937120:CDS | 40.0% | |
| AATTGAGGCAGCAATTGTGA+GGG | + | chr6_3:8217679-8217698 | Msa0937120:CDS | 40.0% | |
| TTGTGAGGGTAATGAAATCC+AGG | + | chr6_3:8217693-8217712 | Msa0937120:CDS | 40.0% | |
| !! | ATTATGTTCTAAAACCCGCC+TGG | - | chr6_3:8217714-8217733 | None:intergenic | 40.0% |
| ACATAATAATGTCATCGCCG+AGG | + | chr6_3:8217727-8217746 | Msa0937120:CDS | 40.0% | |
| AGTTAGAATCCACCACTTCA+CGG | - | chr6_3:8215422-8215441 | None:intergenic | 40.0% | |
| ACTAAAAACTACTCCAGCCA+TGG | - | chr6_3:8215680-8215699 | None:intergenic | 40.0% | |
| TTTGGGGAGAAACTTTACAC+TGG | + | chr6_3:8215882-8215901 | Msa0937120:CDS | 40.0% | |
| TGCTCAAGGAGAAAGTTTCT+CGG | + | chr6_3:8215959-8215978 | Msa0937120:CDS | 40.0% | |
| GGTAGACCATAACAAAGCAT+TGG | + | chr6_3:8216001-8216020 | Msa0937120:intron | 40.0% | |
| CCGAGACATACTAATGTACA+TGG | + | chr6_3:8216031-8216050 | Msa0937120:intron | 40.0% | |
| AAAATCCCCGTTCATGAACT+TGG | + | chr6_3:8216080-8216099 | Msa0937120:CDS | 40.0% | |
| TCATACCAAGTTCATGAACG+GGG | - | chr6_3:8216088-8216107 | None:intergenic | 40.0% | |
| !! | AAGCCTAGTCTTAGTTTCGT+TGG | - | chr6_3:8216138-8216157 | None:intergenic | 40.0% |
| CTTCCACATTCCTTTCTCTA+AGG | - | chr6_3:8216184-8216203 | None:intergenic | 40.0% | |
| TGTTTACCAGAAGGACTTTG+AGG | + | chr6_3:8216262-8216281 | Msa0937120:CDS | 40.0% | |
| AATGATCCTCAAAGTCCTTC+TGG | - | chr6_3:8216271-8216290 | None:intergenic | 40.0% | |
| CAATGAATCTTGTGATTGCG+AGG | + | chr6_3:8216337-8216356 | Msa0937120:CDS | 40.0% | |
| ! | GTCAAAGATAACTAGTCTGG+TGG | + | chr6_3:8216436-8216455 | Msa0937120:CDS | 40.0% |
| AGACATTGCACAAAATCGAC+AGG | - | chr6_3:8216681-8216700 | None:intergenic | 40.0% | |
| ATATGGCGAGGTTATCACAA+AGG | + | chr6_3:8216719-8216738 | Msa0937120:CDS | 40.0% | |
| AAACTTCGCAGAGGGTTAAA+AGG | + | chr6_3:8216849-8216868 | Msa0937120:CDS | 40.0% | |
| AACTTCGCAGAGGGTTAAAA+GGG | + | chr6_3:8216850-8216869 | Msa0937120:CDS | 40.0% | |
| ! | TTTGAGGTACCTTCAAGAGA+AGG | + | chr6_3:8216920-8216939 | Msa0937120:CDS | 40.0% |
| CAAACACATCCTTCTCTTGA+AGG | - | chr6_3:8216932-8216951 | None:intergenic | 40.0% | |
| CCTAGCAAAAAGGCTTCTTT+CGG | + | chr6_3:8216971-8216990 | Msa0937120:CDS | 40.0% | |
| CTAGCAAAAAGGCTTCTTTC+GGG | + | chr6_3:8216972-8216991 | Msa0937120:CDS | 40.0% | |
| TAGCAAAAAGGCTTCTTTCG+GGG | + | chr6_3:8216973-8216992 | Msa0937120:CDS | 40.0% | |
| CAAACTTCTTTCTGCCTCAT+CGG | - | chr6_3:8217009-8217028 | None:intergenic | 40.0% | |
| CAAGGTTTCTTAGCATCTCA+TGG | + | chr6_3:8217119-8217138 | Msa0937120:CDS | 40.0% | |
| ! | AATCTTCCATCTGAAATCCG+AGG | + | chr6_3:8217224-8217243 | Msa0937120:CDS | 40.0% |
| CATAAACCTCGGATTTCAGA+TGG | - | chr6_3:8217233-8217252 | None:intergenic | 40.0% | |
| AAACATTCAGCTCATGCTTC+TGG | - | chr6_3:8217343-8217362 | None:intergenic | 40.0% | |
| TACTCATGTCAGACTTGAAG+AGG | + | chr6_3:8217444-8217463 | Msa0937120:CDS | 40.0% | |
| TCAACTACGTCCTTACTCAT+TGG | - | chr6_3:8217521-8217540 | None:intergenic | 40.0% | |
| AATGAGTAAGGACGTAGTTG+AGG | + | chr6_3:8217520-8217539 | Msa0937120:CDS | 40.0% | |
| ! | CTAGCAAGCTCTTCAAGTTA+AGG | + | chr6_3:8217573-8217592 | Msa0937120:CDS | 40.0% |
| ! | AGCTCTTCAAGTTAAGGATC+GGG | + | chr6_3:8217579-8217598 | Msa0937120:CDS | 40.0% |
| AGATAGGAAGCCACAAATTG+AGG | + | chr6_3:8217664-8217683 | Msa0937120:CDS | 40.0% | |
| ACAATTGCTGCCTCAATTTG+TGG | - | chr6_3:8217677-8217696 | None:intergenic | 40.0% | |
| AAATTGAGGCAGCAATTGTG+AGG | + | chr6_3:8217678-8217697 | Msa0937120:CDS | 40.0% | |
| AATTGAGGCAGCAATTGTGA+GGG | + | chr6_3:8217679-8217698 | Msa0937120:CDS | 40.0% | |
| TTGTGAGGGTAATGAAATCC+AGG | + | chr6_3:8217693-8217712 | Msa0937120:CDS | 40.0% | |
| !! | ATTATGTTCTAAAACCCGCC+TGG | - | chr6_3:8217714-8217733 | None:intergenic | 40.0% |
| ACATAATAATGTCATCGCCG+AGG | + | chr6_3:8217727-8217746 | Msa0937120:CDS | 40.0% | |
| ! | TTTTAACCATCCGAGTCCCA+GGG | - | chr6_3:8215753-8215772 | None:intergenic | 45.0% |
| TCAAGGAGAAAGTTTCTCGG+AGG | + | chr6_3:8215962-8215981 | Msa0937120:CDS | 45.0% | |
| ! | GTTCATGAACGGGGATTTTG+TGG | - | chr6_3:8216079-8216098 | None:intergenic | 45.0% |
| TTGACCTCGTCCTTAGAGAA+AGG | + | chr6_3:8216171-8216190 | Msa0937120:CDS | 45.0% | |
| ! | CATTCCTTTCTCTAAGGACG+AGG | - | chr6_3:8216178-8216197 | None:intergenic | 45.0% |
| CGTCCTTAGAGAAAGGAATG+TGG | + | chr6_3:8216178-8216197 | Msa0937120:CDS | 45.0% | |
| !! | GGAGAGAGTATCTCACTACT+TGG | + | chr6_3:8216400-8216419 | Msa0937120:CDS | 45.0% |
| GCTCATGGATGACAAGTATG+AGG | + | chr6_3:8216526-8216545 | Msa0937120:CDS | 45.0% | |
| ACAGGATCTAACAGCCTTTC+AGG | - | chr6_3:8216663-8216682 | None:intergenic | 45.0% | |
| TGGATGACAAACTTCGCAGA+GGG | + | chr6_3:8216841-8216860 | Msa0937120:CDS | 45.0% | |
| ! | CCGAAAGAAGCCTTTTTGCT+AGG | - | chr6_3:8216974-8216993 | None:intergenic | 45.0% |
| ATGAACCTGTTGTAAGCACC+TGG | - | chr6_3:8217178-8217197 | None:intergenic | 45.0% | |
| AGGTGCTTACAACAGGTTCA+TGG | + | chr6_3:8217177-8217196 | Msa0937120:CDS | 45.0% | |
| GGAAGATTACATTGCGGACT+AGG | - | chr6_3:8217212-8217231 | None:intergenic | 45.0% | |
| AGATTGTCGTGGCATGCATT+TGG | + | chr6_3:8217296-8217315 | Msa0937120:CDS | 45.0% | |
| ! | TGCTGATCGGATGACTTGTA+AGG | + | chr6_3:8217400-8217419 | Msa0937120:CDS | 45.0% |
| GACTTGTAAGGAGATAGAGC+AGG | + | chr6_3:8217412-8217431 | Msa0937120:CDS | 45.0% | |
| TCGGAAAGAGCCAATGAGTA+AGG | + | chr6_3:8217508-8217527 | Msa0937120:CDS | 45.0% | |
| TATAGAAACTCGGCAGAGAG+TGG | + | chr6_3:8217637-8217656 | Msa0937120:CDS | 45.0% | |
| TGAGGGTAATGAAATCCAGG+CGG | + | chr6_3:8217696-8217715 | Msa0937120:CDS | 45.0% | |
| ! | TTTTAACCATCCGAGTCCCA+GGG | - | chr6_3:8215753-8215772 | None:intergenic | 45.0% |
| TCAAGGAGAAAGTTTCTCGG+AGG | + | chr6_3:8215962-8215981 | Msa0937120:CDS | 45.0% | |
| ! | GTTCATGAACGGGGATTTTG+TGG | - | chr6_3:8216079-8216098 | None:intergenic | 45.0% |
| TTGACCTCGTCCTTAGAGAA+AGG | + | chr6_3:8216171-8216190 | Msa0937120:CDS | 45.0% | |
| ! | CATTCCTTTCTCTAAGGACG+AGG | - | chr6_3:8216178-8216197 | None:intergenic | 45.0% |
| CGTCCTTAGAGAAAGGAATG+TGG | + | chr6_3:8216178-8216197 | Msa0937120:CDS | 45.0% | |
| !! | GGAGAGAGTATCTCACTACT+TGG | + | chr6_3:8216400-8216419 | Msa0937120:CDS | 45.0% |
| GCTCATGGATGACAAGTATG+AGG | + | chr6_3:8216526-8216545 | Msa0937120:CDS | 45.0% | |
| ACAGGATCTAACAGCCTTTC+AGG | - | chr6_3:8216663-8216682 | None:intergenic | 45.0% | |
| TGGATGACAAACTTCGCAGA+GGG | + | chr6_3:8216841-8216860 | Msa0937120:CDS | 45.0% | |
| ! | CCGAAAGAAGCCTTTTTGCT+AGG | - | chr6_3:8216974-8216993 | None:intergenic | 45.0% |
| ATGAACCTGTTGTAAGCACC+TGG | - | chr6_3:8217178-8217197 | None:intergenic | 45.0% | |
| AGGTGCTTACAACAGGTTCA+TGG | + | chr6_3:8217177-8217196 | Msa0937120:CDS | 45.0% | |
| GGAAGATTACATTGCGGACT+AGG | - | chr6_3:8217212-8217231 | None:intergenic | 45.0% | |
| AGATTGTCGTGGCATGCATT+TGG | + | chr6_3:8217296-8217315 | Msa0937120:CDS | 45.0% | |
| ! | TGCTGATCGGATGACTTGTA+AGG | + | chr6_3:8217400-8217419 | Msa0937120:CDS | 45.0% |
| GACTTGTAAGGAGATAGAGC+AGG | + | chr6_3:8217412-8217431 | Msa0937120:CDS | 45.0% | |
| TCGGAAAGAGCCAATGAGTA+AGG | + | chr6_3:8217508-8217527 | Msa0937120:CDS | 45.0% | |
| TATAGAAACTCGGCAGAGAG+TGG | + | chr6_3:8217637-8217656 | Msa0937120:CDS | 45.0% | |
| TGAGGGTAATGAAATCCAGG+CGG | + | chr6_3:8217696-8217715 | Msa0937120:CDS | 45.0% | |
| ACGGTTTGTGAACCGTGAAG+TGG | + | chr6_3:8215407-8215426 | Msa0937120:CDS | 50.0% | |
| GTTTGTGAACCGTGAAGTGG+TGG | + | chr6_3:8215410-8215429 | Msa0937120:CDS | 50.0% | |
| GAGTACCCGAGTTTGATCCA+TGG | + | chr6_3:8215660-8215679 | Msa0937120:intron | 50.0% | |
| TCCAGCCATGGATCAAACTC+GGG | - | chr6_3:8215668-8215687 | None:intergenic | 50.0% | |
| CTCCAGCCATGGATCAAACT+CGG | - | chr6_3:8215669-8215688 | None:intergenic | 50.0% | |
| TTATCTGAGCCCATTTCCCC+TGG | + | chr6_3:8215733-8215752 | Msa0937120:intron | 50.0% | |
| TATCTGAGCCCATTTCCCCT+GGG | + | chr6_3:8215734-8215753 | Msa0937120:intron | 50.0% | |
| TTTAACCATCCGAGTCCCAG+GGG | - | chr6_3:8215752-8215771 | None:intergenic | 50.0% | |
| !! | GTTTTAACCATCCGAGTCCC+AGG | - | chr6_3:8215754-8215773 | None:intergenic | 50.0% |
| GTTTCTCGGAGGAGCTTAAC+AGG | + | chr6_3:8215973-8215992 | Msa0937120:CDS | 50.0% | |
| GGAGGAGCTTAACAGGAAGT+GGG | + | chr6_3:8215980-8215999 | Msa0937120:intron | 50.0% | |
| ! | ACGGGGATTTTGTGGTTGCT+TGG | - | chr6_3:8216071-8216090 | None:intergenic | 50.0% |
| GGGTTCGTCTGTTTACCAGA+AGG | + | chr6_3:8216253-8216272 | Msa0937120:CDS | 50.0% | |
| GTGGATGACAAACTTCGCAG+AGG | + | chr6_3:8216840-8216859 | Msa0937120:CDS | 50.0% | |
| ! | AGGGTTAAAAGGGACTGGTG+AGG | + | chr6_3:8216860-8216879 | Msa0937120:CDS | 50.0% |
| ! | GTTAAAAGGGACTGGTGAGG+AGG | + | chr6_3:8216863-8216882 | Msa0937120:CDS | 50.0% |
| ! | AGCATCTCATGGTGCTGAGT+TGG | + | chr6_3:8217130-8217149 | Msa0937120:CDS | 50.0% |
| ! | GCATCTCATGGTGCTGAGTT+GGG | + | chr6_3:8217131-8217150 | Msa0937120:CDS | 50.0% |
| TAGCCCTACACTATCTGTCC+AGG | + | chr6_3:8217157-8217176 | Msa0937120:CDS | 50.0% | |
| GCACCTGGACAGATAGTGTA+GGG | - | chr6_3:8217163-8217182 | None:intergenic | 50.0% | |
| AGCACCTGGACAGATAGTGT+AGG | - | chr6_3:8217164-8217183 | None:intergenic | 50.0% | |
| TCTGTCCAGGTGCTTACAAC+AGG | + | chr6_3:8217170-8217189 | Msa0937120:CDS | 50.0% | |
| !! | CATTGCGGACTAGGTTGAGT+TGG | - | chr6_3:8217203-8217222 | None:intergenic | 50.0% |
| TATTATCTCGGCGCTCACAG+TGG | + | chr6_3:8217269-8217288 | Msa0937120:CDS | 50.0% | |
| ACAGTGGTAGGAGATTGTCG+TGG | + | chr6_3:8217285-8217304 | Msa0937120:CDS | 50.0% | |
| !! | AGTCGTTGGCCTTGGTCAAA+GGG | + | chr6_3:8217474-8217493 | Msa0937120:CDS | 50.0% |
| TCGGGACTGTTGTTGCACAA+AGG | + | chr6_3:8217597-8217616 | Msa0937120:CDS | 50.0% | |
| CGGGACTGTTGTTGCACAAA+GGG | + | chr6_3:8217598-8217617 | Msa0937120:CDS | 50.0% | |
| GAGGGTAATGAAATCCAGGC+GGG | + | chr6_3:8217697-8217716 | Msa0937120:CDS | 50.0% | |
| ACGGTTTGTGAACCGTGAAG+TGG | + | chr6_3:8215407-8215426 | Msa0937120:CDS | 50.0% | |
| GTTTGTGAACCGTGAAGTGG+TGG | + | chr6_3:8215410-8215429 | Msa0937120:CDS | 50.0% | |
| GAGTACCCGAGTTTGATCCA+TGG | + | chr6_3:8215660-8215679 | Msa0937120:intron | 50.0% | |
| TCCAGCCATGGATCAAACTC+GGG | - | chr6_3:8215668-8215687 | None:intergenic | 50.0% | |
| CTCCAGCCATGGATCAAACT+CGG | - | chr6_3:8215669-8215688 | None:intergenic | 50.0% | |
| TTATCTGAGCCCATTTCCCC+TGG | + | chr6_3:8215733-8215752 | Msa0937120:intron | 50.0% | |
| TATCTGAGCCCATTTCCCCT+GGG | + | chr6_3:8215734-8215753 | Msa0937120:intron | 50.0% | |
| TTTAACCATCCGAGTCCCAG+GGG | - | chr6_3:8215752-8215771 | None:intergenic | 50.0% | |
| !! | GTTTTAACCATCCGAGTCCC+AGG | - | chr6_3:8215754-8215773 | None:intergenic | 50.0% |
| GTTTCTCGGAGGAGCTTAAC+AGG | + | chr6_3:8215973-8215992 | Msa0937120:CDS | 50.0% | |
| GGAGGAGCTTAACAGGAAGT+GGG | + | chr6_3:8215980-8215999 | Msa0937120:intron | 50.0% | |
| ! | ACGGGGATTTTGTGGTTGCT+TGG | - | chr6_3:8216071-8216090 | None:intergenic | 50.0% |
| GGGTTCGTCTGTTTACCAGA+AGG | + | chr6_3:8216253-8216272 | Msa0937120:CDS | 50.0% | |
| GTGGATGACAAACTTCGCAG+AGG | + | chr6_3:8216840-8216859 | Msa0937120:CDS | 50.0% | |
| ! | AGGGTTAAAAGGGACTGGTG+AGG | + | chr6_3:8216860-8216879 | Msa0937120:CDS | 50.0% |
| ! | GTTAAAAGGGACTGGTGAGG+AGG | + | chr6_3:8216863-8216882 | Msa0937120:CDS | 50.0% |
| ! | AGCATCTCATGGTGCTGAGT+TGG | + | chr6_3:8217130-8217149 | Msa0937120:CDS | 50.0% |
| ! | GCATCTCATGGTGCTGAGTT+GGG | + | chr6_3:8217131-8217150 | Msa0937120:CDS | 50.0% |
| TAGCCCTACACTATCTGTCC+AGG | + | chr6_3:8217157-8217176 | Msa0937120:CDS | 50.0% | |
| GCACCTGGACAGATAGTGTA+GGG | - | chr6_3:8217163-8217182 | None:intergenic | 50.0% | |
| AGCACCTGGACAGATAGTGT+AGG | - | chr6_3:8217164-8217183 | None:intergenic | 50.0% | |
| TCTGTCCAGGTGCTTACAAC+AGG | + | chr6_3:8217170-8217189 | Msa0937120:CDS | 50.0% | |
| !! | CATTGCGGACTAGGTTGAGT+TGG | - | chr6_3:8217203-8217222 | None:intergenic | 50.0% |
| TATTATCTCGGCGCTCACAG+TGG | + | chr6_3:8217269-8217288 | Msa0937120:CDS | 50.0% | |
| ACAGTGGTAGGAGATTGTCG+TGG | + | chr6_3:8217285-8217304 | Msa0937120:CDS | 50.0% | |
| !! | AGTCGTTGGCCTTGGTCAAA+GGG | + | chr6_3:8217474-8217493 | Msa0937120:CDS | 50.0% |
| TCGGGACTGTTGTTGCACAA+AGG | + | chr6_3:8217597-8217616 | Msa0937120:CDS | 50.0% | |
| CGGGACTGTTGTTGCACAAA+GGG | + | chr6_3:8217598-8217617 | Msa0937120:CDS | 50.0% | |
| GAGGGTAATGAAATCCAGGC+GGG | + | chr6_3:8217697-8217716 | Msa0937120:CDS | 50.0% | |
| ACCCGAGTTTGATCCATGGC+TGG | + | chr6_3:8215664-8215683 | Msa0937120:intron | 55.0% | |
| ATCCGAGTCCCAGGGGAAAT+GGG | - | chr6_3:8215745-8215764 | None:intergenic | 55.0% | |
| CGGAGGAGCTTAACAGGAAG+TGG | + | chr6_3:8215979-8215998 | Msa0937120:intron | 55.0% | |
| CGCAGAGGGTTAAAAGGGAC+TGG | + | chr6_3:8216855-8216874 | Msa0937120:CDS | 55.0% | |
| GGGGAAGACTGTATCCGATG+AGG | + | chr6_3:8216992-8217011 | Msa0937120:CDS | 55.0% | |
| !! | GAAGAGGTGCCTTCAGTCGT+TGG | + | chr6_3:8217460-8217479 | Msa0937120:CDS | 55.0% |
| TGACCAAGGCCAACGACTGA+AGG | - | chr6_3:8217472-8217491 | None:intergenic | 55.0% | |
| !! | CAGTCGTTGGCCTTGGTCAA+AGG | + | chr6_3:8217473-8217492 | Msa0937120:CDS | 55.0% |
| AGAAACTCGGCAGAGAGTGG+AGG | + | chr6_3:8217640-8217659 | Msa0937120:CDS | 55.0% | |
| GGCAGAGAGTGGAGGAAGAT+AGG | + | chr6_3:8217648-8217667 | Msa0937120:CDS | 55.0% | |
| ! | CTGCAGCTGCTTTGTGACCT+CGG | - | chr6_3:8217747-8217766 | None:intergenic | 55.0% |
| ACCCGAGTTTGATCCATGGC+TGG | + | chr6_3:8215664-8215683 | Msa0937120:intron | 55.0% | |
| ATCCGAGTCCCAGGGGAAAT+GGG | - | chr6_3:8215745-8215764 | None:intergenic | 55.0% | |
| CGGAGGAGCTTAACAGGAAG+TGG | + | chr6_3:8215979-8215998 | Msa0937120:intron | 55.0% | |
| CGCAGAGGGTTAAAAGGGAC+TGG | + | chr6_3:8216855-8216874 | Msa0937120:CDS | 55.0% | |
| GGGGAAGACTGTATCCGATG+AGG | + | chr6_3:8216992-8217011 | Msa0937120:CDS | 55.0% | |
| !! | GAAGAGGTGCCTTCAGTCGT+TGG | + | chr6_3:8217460-8217479 | Msa0937120:CDS | 55.0% |
| TGACCAAGGCCAACGACTGA+AGG | - | chr6_3:8217472-8217491 | None:intergenic | 55.0% | |
| !! | CAGTCGTTGGCCTTGGTCAA+AGG | + | chr6_3:8217473-8217492 | Msa0937120:CDS | 55.0% |
| AGAAACTCGGCAGAGAGTGG+AGG | + | chr6_3:8217640-8217659 | Msa0937120:CDS | 55.0% | |
| GGCAGAGAGTGGAGGAAGAT+AGG | + | chr6_3:8217648-8217667 | Msa0937120:CDS | 55.0% | |
| ! | CTGCAGCTGCTTTGTGACCT+CGG | - | chr6_3:8217747-8217766 | None:intergenic | 55.0% |
| AGCCCATTTCCCCTGGGACT+CGG | + | chr6_3:8215740-8215759 | Msa0937120:intron | 60.0% | |
| CATCCGAGTCCCAGGGGAAA+TGG | - | chr6_3:8215746-8215765 | None:intergenic | 60.0% | |
| CATTTCCCCTGGGACTCGGA+TGG | + | chr6_3:8215744-8215763 | Msa0937120:intron | 60.0% | |
| ATCTCGGCGCTCACAGTGGT+AGG | + | chr6_3:8217273-8217292 | Msa0937120:CDS | 60.0% | |
| ! | GTGCCTTCAGTCGTTGGCCT+TGG | + | chr6_3:8217466-8217485 | Msa0937120:CDS | 60.0% |
| CGAGGTCACAAAGCAGCTGC+AGG | + | chr6_3:8217745-8217764 | Msa0937120:CDS | 60.0% | |
| AGCCCATTTCCCCTGGGACT+CGG | + | chr6_3:8215740-8215759 | Msa0937120:intron | 60.0% | |
| CATCCGAGTCCCAGGGGAAA+TGG | - | chr6_3:8215746-8215765 | None:intergenic | 60.0% | |
| CATTTCCCCTGGGACTCGGA+TGG | + | chr6_3:8215744-8215763 | Msa0937120:intron | 60.0% | |
| ATCTCGGCGCTCACAGTGGT+AGG | + | chr6_3:8217273-8217292 | Msa0937120:CDS | 60.0% | |
| ! | GTGCCTTCAGTCGTTGGCCT+TGG | + | chr6_3:8217466-8217485 | Msa0937120:CDS | 60.0% |
| CGAGGTCACAAAGCAGCTGC+AGG | + | chr6_3:8217745-8217764 | Msa0937120:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 8215396 | 8217823 | 8215396 | ID=Msa0937120;Name=Msa0937120 |
| chr6_3 | mRNA | 8215396 | 8217823 | 8215396 | ID=Msa0937120-mRNA-1;Parent=Msa0937120;Name=Msa0937120-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.33|0|1|1|1|4|0|632 |
| chr6_3 | exon | 8215396 | 8215532 | 8215396 | ID=Msa0937120-mRNA-1:exon:2680;Parent=Msa0937120-mRNA-1 |
| chr6_3 | exon | 8215854 | 8215997 | 8215854 | ID=Msa0937120-mRNA-1:exon:2681;Parent=Msa0937120-mRNA-1 |
| chr6_3 | exon | 8216073 | 8216580 | 8216073 | ID=Msa0937120-mRNA-1:exon:2682;Parent=Msa0937120-mRNA-1 |
| chr6_3 | exon | 8216714 | 8217823 | 8216714 | ID=Msa0937120-mRNA-1:exon:2683;Parent=Msa0937120-mRNA-1 |
| chr6_3 | CDS | 8215396 | 8215532 | 8215396 | ID=Msa0937120-mRNA-1:cds;Parent=Msa0937120-mRNA-1 |
| chr6_3 | CDS | 8215854 | 8215997 | 8215854 | ID=Msa0937120-mRNA-1:cds;Parent=Msa0937120-mRNA-1 |
| chr6_3 | CDS | 8216073 | 8216580 | 8216073 | ID=Msa0937120-mRNA-1:cds;Parent=Msa0937120-mRNA-1 |
| chr6_3 | CDS | 8216714 | 8217823 | 8216714 | ID=Msa0937120-mRNA-1:cds;Parent=Msa0937120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
