AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0942250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942250 MtrunA17_Chr6g0458271 94.268 157 9 0 1 157 1 157 5.04e-106 299
Msa0942250 MtrunA17_Chr6g0458281 90.506 158 10 3 1 157 1 154 3.82e-98 279
Msa0942250 MtrunA17_Chr6g0473621 40.411 146 79 3 19 156 11 156 1.20e-28 108
Msa0942250 MtrunA17_Chr7g0243051 46.667 105 53 1 35 136 16 120 3.70e-26 99.0
Msa0942250 MtrunA17_Chr1g0203771 43.519 108 57 2 37 140 21 128 1.08e-24 97.1
Msa0942250 MtrunA17_Chr2g0285591 37.097 124 77 1 33 155 25 148 4.64e-23 91.3
Msa0942250 MtrunA17_Chr4g0057261 43.810 105 57 1 38 140 32 136 7.08e-23 91.3
Msa0942250 MtrunA17_Chr4g0007601 51.220 82 40 0 58 139 26 107 3.18e-18 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942250 AT5G14360.1 54.971 171 55 5 1 157 1 163 5.71e-57 176
Msa0942250 AT5G40630.1 47.205 161 66 3 1 142 1 161 3.89e-44 143
Msa0942250 AT5G62100.3 49.057 106 53 1 38 142 15 120 1.45e-26 98.2
Msa0942250 AT5G62100.6 49.057 106 53 1 38 142 15 120 1.45e-26 98.2
Msa0942250 AT5G62100.5 48.148 108 55 1 38 144 15 122 7.36e-26 97.8
Msa0942250 AT5G62100.4 48.148 108 55 1 38 144 15 122 1.27e-25 97.4
Msa0942250 AT5G62100.2 48.148 108 55 1 38 144 15 122 7.15e-25 97.1
Msa0942250 AT5G62100.1 48.148 108 55 1 38 144 15 122 1.22e-24 96.7
Msa0942250 AT5G07220.1 40.833 120 70 1 38 156 21 140 6.89e-24 94.7
Msa0942250 AT5G52060.1 41.667 108 58 1 38 140 39 146 1.16e-21 89.4
Msa0942250 AT3G51780.1 41.071 112 50 2 36 131 8 119 2.45e-19 82.0

Find 39 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGAGTGTATCGTGAATT+TGG 0.201129 6_3:+16816252 None:intergenic
AGATCTAGCATTCACACATT+TGG 0.320437 6_3:+16816288 None:intergenic
ATTGAAGCAACTTCAACTTT+TGG 0.327143 6_3:-16817039 Msa0942250:intron
AGCATATCTAAACTTGGCTT+TGG 0.330269 6_3:-16817231 Msa0942250:CDS
TTCTTCACATGATTGGTGTT+AGG 0.341495 6_3:-16816461 Msa0942250:CDS
AATTTCAGGAGAATTGAAAA+TGG 0.354607 6_3:-16816562 Msa0942250:intron
GGAAATGAAGCTACTTGGTT+TGG 0.365011 6_3:-16816397 Msa0942250:CDS
TAGAGAAGCCTCTGCTCTCT+TGG 0.368216 6_3:+16816513 None:intergenic
AATTATTATTATCTAGTAGT+TGG 0.369412 6_3:-16816102 Msa0942250:three_prime_UTR
TCACAACAATCCTTCTCAAC+TGG 0.371617 6_3:+16817189 None:intergenic
GATCTAGCATTCACACATTT+GGG 0.371786 6_3:+16816289 None:intergenic
TCTTCACATGATTGGTGTTA+GGG 0.396279 6_3:-16816460 Msa0942250:CDS
TCATATTATACACAAATTGT+AGG 0.396908 6_3:+16816345 None:intergenic
AGCTTCATTTCCTTGATAGC+TGG 0.407812 6_3:+16816408 None:intergenic
AATGAATTTCTTCACATGAT+TGG 0.414769 6_3:-16816468 Msa0942250:CDS
ATCAAGGAAATGAAGCTACT+TGG 0.442950 6_3:-16816402 Msa0942250:CDS
TCTAGAAGATCCAGCTATCA+AGG 0.459465 6_3:-16816418 Msa0942250:CDS
AGAGAGAGTAACAAAAGTGT+TGG 0.471291 6_3:-16817114 Msa0942250:CDS
TATTGTGAGAGAAAACATAA+AGG 0.478074 6_3:-16817319 None:intergenic
TGTAGAAGCATATCTAAACT+TGG 0.485899 6_3:-16817237 Msa0942250:CDS
TGAAAATAGTGAAATCGAAT+GGG 0.489480 6_3:-16817169 Msa0942250:CDS
AGTAGCATCTCCAGTTGAGA+AGG 0.522995 6_3:-16817199 Msa0942250:CDS
TGAATGCTAGATCTGATTGC+AGG 0.523626 6_3:-16816279 Msa0942250:three_prime_UTR
AAGCTACTTGGTTTGGCAAG+AGG 0.530918 6_3:-16816390 Msa0942250:CDS
ATCGAATGGGAACTTAGGCC+TGG 0.546005 6_3:-16817156 Msa0942250:CDS
AAAATAAGATGATGAAGTTG+AGG 0.552877 6_3:-16817272 Msa0942250:exon
GTGAAAATAGTGAAATCGAA+TGG 0.559143 6_3:-16817170 Msa0942250:CDS
TGATGAAGTTGAGGTCAAAG+AGG 0.559715 6_3:-16817263 Msa0942250:CDS
GAGCAGAGGCTTCTCTACAA+AGG 0.569914 6_3:-16816507 Msa0942250:CDS
TTCTCTACAAAGGTAAAGAG+AGG 0.582260 6_3:-16816497 Msa0942250:CDS
GAGTTTCAACTATGTCAAAG+TGG 0.599297 6_3:-16817074 Msa0942250:CDS
GTGAAATCGAATGGGAACTT+AGG 0.612081 6_3:-16817161 Msa0942250:CDS
TGGTGTTAGGGACAAAGACA+AGG 0.613407 6_3:-16816448 Msa0942250:CDS
GTTTAGAGCCAAGAGAGCAG+AGG 0.629869 6_3:-16816521 Msa0942250:CDS
GGTGCAACACCATGTTATGT+TGG 0.633090 6_3:-16816044 Msa0942250:three_prime_UTR
TAGCAAACTCCAACATAACA+TGG 0.640581 6_3:+16816035 None:intergenic
TCTCTACAAAGGTAAAGAGA+GGG 0.650942 6_3:-16816496 Msa0942250:CDS
TATACACAAATTGTAGGACA+AGG 0.665060 6_3:+16816351 None:intergenic
GAATGGGAACTTAGGCCTGG+TGG 0.713354 6_3:-16817153 Msa0942250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTGAACAATTATATTT+AGG - chr6_3:16816366-16816385 Msa0942250:CDS 10.0%
!! TTAATTGAACAATTATATTT+AGG - chr6_3:16816366-16816385 Msa0942250:CDS 10.0%
!! TTGTACATTAACATAAAATA+TGG - chr6_3:16816419-16816438 Msa0942250:CDS 15.0%
!! AACTATAAAAATTACTTTGA+GGG - chr6_3:16816708-16816727 Msa0942250:intron 15.0%
!!! AATTTTTATGAATGAATTTC+AGG - chr6_3:16816742-16816761 Msa0942250:intron 15.0%
!! AATTATTATTATCTAGTAGT+TGG - chr6_3:16817216-16817235 Msa0942250:CDS 15.0%
!! TTGTACATTAACATAAAATA+TGG - chr6_3:16816419-16816438 Msa0942250:CDS 15.0%
!! AACTATAAAAATTACTTTGA+GGG - chr6_3:16816708-16816727 Msa0942250:intron 15.0%
!!! AATTTTTATGAATGAATTTC+AGG - chr6_3:16816742-16816761 Msa0942250:intron 15.0%
!! AATTATTATTATCTAGTAGT+TGG - chr6_3:16817216-16817235 Msa0942250:CDS 15.0%
!! TAATTTAAACCCAAAACAAA+AGG + chr6_3:16816339-16816358 None:intergenic 20.0%
!! GAGTTATTACCAAAATTTAT+TGG - chr6_3:16816449-16816468 Msa0942250:CDS 20.0%
!!! ATAATAATGCAAGACTTTTT+TGG + chr6_3:16816684-16816703 None:intergenic 20.0%
!! CAACTATAAAAATTACTTTG+AGG - chr6_3:16816707-16816726 Msa0942250:intron 20.0%
!! ACTATAAAAATTACTTTGAG+GGG - chr6_3:16816709-16816728 Msa0942250:intron 20.0%
!! TCATATTATACACAAATTGT+AGG + chr6_3:16816976-16816995 None:intergenic 20.0%
!! TAATTTAAACCCAAAACAAA+AGG + chr6_3:16816339-16816358 None:intergenic 20.0%
!! GAGTTATTACCAAAATTTAT+TGG - chr6_3:16816449-16816468 Msa0942250:CDS 20.0%
!!! ATAATAATGCAAGACTTTTT+TGG + chr6_3:16816684-16816703 None:intergenic 20.0%
!! CAACTATAAAAATTACTTTG+AGG - chr6_3:16816707-16816726 Msa0942250:intron 20.0%
!! ACTATAAAAATTACTTTGAG+GGG - chr6_3:16816709-16816728 Msa0942250:intron 20.0%
!! TCATATTATACACAAATTGT+AGG + chr6_3:16816976-16816995 None:intergenic 20.0%
! AAAATAAGATGATGAAGTTG+AGG - chr6_3:16816046-16816065 Msa0942250:three_prime_UTR 25.0%
! TGAAAATAGTGAAATCGAAT+GGG - chr6_3:16816149-16816168 Msa0942250:three_prime_UTR 25.0%
! AATCAATACAAATGAAAGGT+TGG + chr6_3:16816315-16816334 None:intergenic 25.0%
!!! TATTGATTGCCTTTTGTTTT+GGG - chr6_3:16816327-16816346 Msa0942250:three_prime_UTR 25.0%
! AATTTCAGGAGAATTGAAAA+TGG - chr6_3:16816756-16816775 Msa0942250:intron 25.0%
!!! ATTGAAAATGGTTTTGTCAT+TGG - chr6_3:16816768-16816787 Msa0942250:intron 25.0%
! AATGAATTTCTTCACATGAT+TGG - chr6_3:16816850-16816869 Msa0942250:intron 25.0%
!!! GTTTCACTTTTGTTATTTTC+TGG + chr6_3:16817123-16817142 None:intergenic 25.0%
! TGATTTAAAAATGTGTAAGC+TGG - chr6_3:16817253-16817272 Msa0942250:CDS 25.0%
! AAAATAAGATGATGAAGTTG+AGG - chr6_3:16816046-16816065 Msa0942250:three_prime_UTR 25.0%
! TGAAAATAGTGAAATCGAAT+GGG - chr6_3:16816149-16816168 Msa0942250:three_prime_UTR 25.0%
! AATCAATACAAATGAAAGGT+TGG + chr6_3:16816315-16816334 None:intergenic 25.0%
!!! TATTGATTGCCTTTTGTTTT+GGG - chr6_3:16816327-16816346 Msa0942250:three_prime_UTR 25.0%
! AATTTCAGGAGAATTGAAAA+TGG - chr6_3:16816756-16816775 Msa0942250:intron 25.0%
!!! ATTGAAAATGGTTTTGTCAT+TGG - chr6_3:16816768-16816787 Msa0942250:intron 25.0%
! AATGAATTTCTTCACATGAT+TGG - chr6_3:16816850-16816869 Msa0942250:intron 25.0%
!!! GTTTCACTTTTGTTATTTTC+TGG + chr6_3:16817123-16817142 None:intergenic 25.0%
! TGATTTAAAAATGTGTAAGC+TGG - chr6_3:16817253-16817272 Msa0942250:CDS 25.0%
! TGTAGAAGCATATCTAAACT+TGG - chr6_3:16816081-16816100 Msa0942250:three_prime_UTR 30.0%
GTGAAAATAGTGAAATCGAA+TGG - chr6_3:16816148-16816167 Msa0942250:three_prime_UTR 30.0%
! ATTGAAGCAACTTCAACTTT+TGG - chr6_3:16816279-16816298 Msa0942250:three_prime_UTR 30.0%
AGGCAATCAATACAAATGAA+AGG + chr6_3:16816319-16816338 None:intergenic 30.0%
!!! GTATTGATTGCCTTTTGTTT+TGG - chr6_3:16816326-16816345 Msa0942250:three_prime_UTR 30.0%
! AACTGCATGCCAATAAATTT+TGG + chr6_3:16816461-16816480 None:intergenic 30.0%
!! TCTCCATTTTTAAGAGTTAG+AGG - chr6_3:16816570-16816589 Msa0942250:intron 30.0%
!! CTCCATTTTTAAGAGTTAGA+GGG - chr6_3:16816571-16816590 Msa0942250:intron 30.0%
AACCCTCTAACTCTTAAAAA+TGG + chr6_3:16816576-16816595 None:intergenic 30.0%
AGGGTTAAAAAAATTCTGCA+TGG - chr6_3:16816590-16816609 Msa0942250:intron 30.0%
TATACACAAATTGTAGGACA+AGG + chr6_3:16816970-16816989 None:intergenic 30.0%
! TGTAGAAGCATATCTAAACT+TGG - chr6_3:16816081-16816100 Msa0942250:three_prime_UTR 30.0%
GTGAAAATAGTGAAATCGAA+TGG - chr6_3:16816148-16816167 Msa0942250:three_prime_UTR 30.0%
! ATTGAAGCAACTTCAACTTT+TGG - chr6_3:16816279-16816298 Msa0942250:three_prime_UTR 30.0%
AGGCAATCAATACAAATGAA+AGG + chr6_3:16816319-16816338 None:intergenic 30.0%
!!! GTATTGATTGCCTTTTGTTT+TGG - chr6_3:16816326-16816345 Msa0942250:three_prime_UTR 30.0%
! AACTGCATGCCAATAAATTT+TGG + chr6_3:16816461-16816480 None:intergenic 30.0%
!! TCTCCATTTTTAAGAGTTAG+AGG - chr6_3:16816570-16816589 Msa0942250:intron 30.0%
!! CTCCATTTTTAAGAGTTAGA+GGG - chr6_3:16816571-16816590 Msa0942250:intron 30.0%
AACCCTCTAACTCTTAAAAA+TGG + chr6_3:16816576-16816595 None:intergenic 30.0%
AGGGTTAAAAAAATTCTGCA+TGG - chr6_3:16816590-16816609 Msa0942250:intron 30.0%
TATACACAAATTGTAGGACA+AGG + chr6_3:16816970-16816989 None:intergenic 30.0%
AGCATATCTAAACTTGGCTT+TGG - chr6_3:16816087-16816106 Msa0942250:three_prime_UTR 35.0%
! AGAGAGAGTAACAAAAGTGT+TGG - chr6_3:16816204-16816223 Msa0942250:three_prime_UTR 35.0%
GAGTTTCAACTATGTCAAAG+TGG - chr6_3:16816244-16816263 Msa0942250:three_prime_UTR 35.0%
! TAATTTAAAGTTCCGCCGTA+CGG + chr6_3:16816545-16816564 None:intergenic 35.0%
TTCTCTACAAAGGTAAAGAG+AGG - chr6_3:16816821-16816840 Msa0942250:intron 35.0%
TCTCTACAAAGGTAAAGAGA+GGG - chr6_3:16816822-16816841 Msa0942250:intron 35.0%
! TTCTTCACATGATTGGTGTT+AGG - chr6_3:16816857-16816876 Msa0942250:intron 35.0%
!! TCTTCACATGATTGGTGTTA+GGG - chr6_3:16816858-16816877 Msa0942250:intron 35.0%
ATCAAGGAAATGAAGCTACT+TGG - chr6_3:16816916-16816935 Msa0942250:intron 35.0%
GATCTAGCATTCACACATTT+GGG + chr6_3:16817032-16817051 None:intergenic 35.0%
AGATCTAGCATTCACACATT+TGG + chr6_3:16817033-16817052 None:intergenic 35.0%
TAGCAAACTCCAACATAACA+TGG + chr6_3:16817286-16817305 None:intergenic 35.0%
AGCATATCTAAACTTGGCTT+TGG - chr6_3:16816087-16816106 Msa0942250:three_prime_UTR 35.0%
! AGAGAGAGTAACAAAAGTGT+TGG - chr6_3:16816204-16816223 Msa0942250:three_prime_UTR 35.0%
GAGTTTCAACTATGTCAAAG+TGG - chr6_3:16816244-16816263 Msa0942250:three_prime_UTR 35.0%
! TAATTTAAAGTTCCGCCGTA+CGG + chr6_3:16816545-16816564 None:intergenic 35.0%
TTCTCTACAAAGGTAAAGAG+AGG - chr6_3:16816821-16816840 Msa0942250:intron 35.0%
TCTCTACAAAGGTAAAGAGA+GGG - chr6_3:16816822-16816841 Msa0942250:intron 35.0%
! TTCTTCACATGATTGGTGTT+AGG - chr6_3:16816857-16816876 Msa0942250:intron 35.0%
!! TCTTCACATGATTGGTGTTA+GGG - chr6_3:16816858-16816877 Msa0942250:intron 35.0%
ATCAAGGAAATGAAGCTACT+TGG - chr6_3:16816916-16816935 Msa0942250:intron 35.0%
GATCTAGCATTCACACATTT+GGG + chr6_3:16817032-16817051 None:intergenic 35.0%
AGATCTAGCATTCACACATT+TGG + chr6_3:16817033-16817052 None:intergenic 35.0%
TAGCAAACTCCAACATAACA+TGG + chr6_3:16817286-16817305 None:intergenic 35.0%
TGATGAAGTTGAGGTCAAAG+AGG - chr6_3:16816055-16816074 Msa0942250:three_prime_UTR 40.0%
TCACAACAATCCTTCTCAAC+TGG + chr6_3:16816132-16816151 None:intergenic 40.0%
GTGAAATCGAATGGGAACTT+AGG - chr6_3:16816157-16816176 Msa0942250:three_prime_UTR 40.0%
TCTAGAAGATCCAGCTATCA+AGG - chr6_3:16816900-16816919 Msa0942250:intron 40.0%
! AGCTTCATTTCCTTGATAGC+TGG + chr6_3:16816913-16816932 None:intergenic 40.0%
GGAAATGAAGCTACTTGGTT+TGG - chr6_3:16816921-16816940 Msa0942250:intron 40.0%
TGAATGCTAGATCTGATTGC+AGG - chr6_3:16817039-16817058 Msa0942250:intron 40.0%
CTTCGAGTGTATCGTGAATT+TGG + chr6_3:16817069-16817088 None:intergenic 40.0%
TGATGAAGTTGAGGTCAAAG+AGG - chr6_3:16816055-16816074 Msa0942250:three_prime_UTR 40.0%
TCACAACAATCCTTCTCAAC+TGG + chr6_3:16816132-16816151 None:intergenic 40.0%
GTGAAATCGAATGGGAACTT+AGG - chr6_3:16816157-16816176 Msa0942250:three_prime_UTR 40.0%
TCTAGAAGATCCAGCTATCA+AGG - chr6_3:16816900-16816919 Msa0942250:intron 40.0%
! AGCTTCATTTCCTTGATAGC+TGG + chr6_3:16816913-16816932 None:intergenic 40.0%
GGAAATGAAGCTACTTGGTT+TGG - chr6_3:16816921-16816940 Msa0942250:intron 40.0%
TGAATGCTAGATCTGATTGC+AGG - chr6_3:16817039-16817058 Msa0942250:intron 40.0%
CTTCGAGTGTATCGTGAATT+TGG + chr6_3:16817069-16817088 None:intergenic 40.0%
AGTAGCATCTCCAGTTGAGA+AGG - chr6_3:16816119-16816138 Msa0942250:three_prime_UTR 45.0%
! TTTTGTACAAGCATGCCACC+AGG + chr6_3:16816183-16816202 None:intergenic 45.0%
! ACTCCAGTTTTGCTACCGTA+CGG - chr6_3:16816527-16816546 Msa0942250:CDS 45.0%
! TGGTGTTAGGGACAAAGACA+AGG - chr6_3:16816870-16816889 Msa0942250:intron 45.0%
!! AAGCTACTTGGTTTGGCAAG+AGG - chr6_3:16816928-16816947 Msa0942250:intron 45.0%
GGTGCAACACCATGTTATGT+TGG - chr6_3:16817274-16817293 Msa0942250:exon 45.0%
AGTAGCATCTCCAGTTGAGA+AGG - chr6_3:16816119-16816138 Msa0942250:three_prime_UTR 45.0%
! TTTTGTACAAGCATGCCACC+AGG + chr6_3:16816183-16816202 None:intergenic 45.0%
! ACTCCAGTTTTGCTACCGTA+CGG - chr6_3:16816527-16816546 Msa0942250:CDS 45.0%
! TGGTGTTAGGGACAAAGACA+AGG - chr6_3:16816870-16816889 Msa0942250:intron 45.0%
!! AAGCTACTTGGTTTGGCAAG+AGG - chr6_3:16816928-16816947 Msa0942250:intron 45.0%
GGTGCAACACCATGTTATGT+TGG - chr6_3:16817274-16817293 Msa0942250:exon 45.0%
!! TTCAAAAATATATATAAATA+TGG + chr6_3:16816637-16816656 None:intergenic 5.0%
!! TTCAAAAATATATATAAATA+TGG + chr6_3:16816637-16816656 None:intergenic 5.0%
ATCGAATGGGAACTTAGGCC+TGG - chr6_3:16816162-16816181 Msa0942250:three_prime_UTR 50.0%
! GTTTAGAGCCAAGAGAGCAG+AGG - chr6_3:16816797-16816816 Msa0942250:intron 50.0%
TAGAGAAGCCTCTGCTCTCT+TGG + chr6_3:16816808-16816827 None:intergenic 50.0%
GAGCAGAGGCTTCTCTACAA+AGG - chr6_3:16816811-16816830 Msa0942250:intron 50.0%
ATCGAATGGGAACTTAGGCC+TGG - chr6_3:16816162-16816181 Msa0942250:three_prime_UTR 50.0%
! GTTTAGAGCCAAGAGAGCAG+AGG - chr6_3:16816797-16816816 Msa0942250:intron 50.0%
TAGAGAAGCCTCTGCTCTCT+TGG + chr6_3:16816808-16816827 None:intergenic 50.0%
GAGCAGAGGCTTCTCTACAA+AGG - chr6_3:16816811-16816830 Msa0942250:intron 50.0%
GAATGGGAACTTAGGCCTGG+TGG - chr6_3:16816165-16816184 Msa0942250:three_prime_UTR 55.0%
! CCAGTTTTGCTACCGTACGG+CGG - chr6_3:16816530-16816549 Msa0942250:CDS 55.0%
GAATGGGAACTTAGGCCTGG+TGG - chr6_3:16816165-16816184 Msa0942250:three_prime_UTR 55.0%
! CCAGTTTTGCTACCGTACGG+CGG - chr6_3:16816530-16816549 Msa0942250:CDS 55.0%
CCGCCGTACGGTAGCAAAAC+TGG + chr6_3:16816533-16816552 None:intergenic 60.0%
CCGCCGTACGGTAGCAAAAC+TGG + chr6_3:16816533-16816552 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 16816006 16817334 16816006 ID=Msa0942250;Name=Msa0942250
chr6_3 mRNA 16816006 16817334 16816006 ID=Msa0942250-mRNA-1;Parent=Msa0942250;Name=Msa0942250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=48|1|1|1|1|1|2|344|157
chr6_3 exon 16816006 16816576 16816006 ID=Msa0942250-mRNA-1:exon:5085;Parent=Msa0942250-mRNA-1
chr6_3 exon 16817040 16817334 16817040 ID=Msa0942250-mRNA-1:exon:5084;Parent=Msa0942250-mRNA-1
chr6_3 five_prime_UTR 16817287 16817334 16817287 ID=Msa0942250-mRNA-1:five_prime_utr;Parent=Msa0942250-mRNA-1
chr6_3 CDS 16817040 16817286 16817040 ID=Msa0942250-mRNA-1:cds;Parent=Msa0942250-mRNA-1
chr6_3 CDS 16816350 16816576 16816350 ID=Msa0942250-mRNA-1:cds;Parent=Msa0942250-mRNA-1
chr6_3 three_prime_UTR 16816006 16816349 16816006 ID=Msa0942250-mRNA-1:three_prime_utr;Parent=Msa0942250-mRNA-1
Gene Sequence

>Msa0942250

ATGATGAAGTTGAGGTCAAAGAGGTTTTGTAGAAGCATATCTAAACTTGGCTTTGGAAACAAAGTAGTAGCATCTCCAGTTGAGAAGGATTGTTGTGAAAATAGTGAAATCGAATGGGAACTTAGGCCTGGTGGCATGCTTGTACAAAAAAGAGAGAGTAACAAAAGTGTTGGAGAGATGATCACAATTAGAGTTTCAACTATGTCAAAGTGGCATGACATTTCTATTGAAGCAACTTCAACTTTTGGAGAATTGAAAATGGTTTTGTCATTGGTAACAAGTTTAGAGCCAAGAGAGCAGAGGCTTCTCTACAAAGGTAAAGAGAGGGATGACAATGAATTTCTTCACATGATTGGTGTTAGGGACAAAGACAAGGTTTTGCTTCTAGAAGATCCAGCTATCAAGGAAATGAAGCTACTTGGTTTGGCAAGAGGACAACATATTAGAAATCCTTGTCCTACAATTTGTGTATAA
Protein sequence

>Msa0942250

MMKLRSKRFCRSISKLGFGNKVVASPVEKDCCENSEIEWELRPGGMLVQKRESNKSVGEMITIRVSTMSKWHDISIEATSTFGELKMVLSLVTSLEPREQRLLYKGKERDDNEFLHMIGVRDKDKVLLLEDPAIKEMKLLGLARGQHIRNPCPTICV*