Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876960 | XP_003618792.1 | 97.600 | 125 | 3 | 0 | 1 | 125 | 1 | 125 | 1.56e-81 | 250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876960 | sp|Q0WPX7|BAG2_ARATH | 49.438 | 89 | 44 | 1 | 38 | 125 | 15 | 103 | 9.03e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876960 | G7KN78 | 97.600 | 125 | 3 | 0 | 1 | 125 | 1 | 125 | 7.46e-82 | 250 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0876950 | Msa0876960 | 0.849655 | 2.812030e-60 | -8.615850e-47 |
| Msa0876960 | Msa0942240 | 0.809676 | 1.681889e-50 | -8.615850e-47 |
| Msa0876960 | Msa0942250 | 0.848959 | 4.395619e-60 | -8.615850e-47 |
| Msa0876960 | Msa0979300 | 0.947435 | 6.770456e-106 | -8.615850e-47 |
| Msa0876960 | Msa0979310 | 0.850729 | 1.406656e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876960 | MtrunA17_Chr6g0458271 | 97.600 | 125 | 3 | 0 | 1 | 125 | 1 | 125 | 1.44e-85 | 250 |
| Msa0876960 | MtrunA17_Chr6g0458281 | 88.889 | 126 | 9 | 3 | 1 | 125 | 1 | 122 | 1.14e-71 | 215 |
| Msa0876960 | MtrunA17_Chr6g0473621 | 45.217 | 115 | 55 | 4 | 19 | 125 | 11 | 125 | 2.52e-21 | 90.9 |
| Msa0876960 | MtrunA17_Chr7g0243051 | 38.843 | 121 | 66 | 2 | 32 | 144 | 13 | 133 | 9.92e-20 | 84.3 |
| Msa0876960 | MtrunA17_Chr2g0285591 | 43.617 | 94 | 52 | 1 | 33 | 125 | 25 | 118 | 1.14e-19 | 84.3 |
| Msa0876960 | MtrunA17_Chr1g0203771 | 42.424 | 99 | 53 | 1 | 31 | 125 | 15 | 113 | 3.34e-19 | 84.7 |
| Msa0876960 | MtrunA17_Chr4g0057261 | 45.556 | 90 | 47 | 1 | 38 | 125 | 32 | 121 | 1.18e-17 | 79.7 |
| Msa0876960 | MtrunA17_Chr4g0007601 | 50.000 | 68 | 34 | 0 | 58 | 125 | 26 | 93 | 7.14e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876960 | AT5G14360.1 | 54.676 | 139 | 44 | 4 | 1 | 125 | 1 | 134 | 2.92e-44 | 146 |
| Msa0876960 | AT5G40630.1 | 45.517 | 145 | 58 | 4 | 1 | 125 | 1 | 144 | 8.48e-34 | 119 |
| Msa0876960 | AT5G62100.3 | 49.438 | 89 | 44 | 1 | 38 | 125 | 15 | 103 | 3.91e-19 | 81.3 |
| Msa0876960 | AT5G62100.6 | 49.438 | 89 | 44 | 1 | 38 | 125 | 15 | 103 | 3.91e-19 | 81.3 |
| Msa0876960 | AT5G62100.5 | 49.438 | 89 | 44 | 1 | 38 | 125 | 15 | 103 | 1.90e-18 | 80.9 |
| Msa0876960 | AT5G62100.4 | 49.438 | 89 | 44 | 1 | 38 | 125 | 15 | 103 | 2.53e-18 | 80.5 |
| Msa0876960 | AT5G62100.2 | 49.438 | 89 | 44 | 1 | 38 | 125 | 15 | 103 | 9.18e-18 | 80.5 |
| Msa0876960 | AT5G62100.1 | 49.438 | 89 | 44 | 1 | 38 | 125 | 15 | 103 | 1.32e-17 | 80.1 |
| Msa0876960 | AT5G07220.1 | 46.067 | 89 | 47 | 1 | 38 | 125 | 21 | 109 | 1.46e-17 | 80.1 |
| Msa0876960 | AT3G51780.1 | 40.952 | 105 | 47 | 1 | 36 | 125 | 8 | 112 | 5.76e-17 | 77.8 |
| Msa0876960 | AT5G52060.1 | 41.935 | 93 | 49 | 1 | 38 | 125 | 39 | 131 | 4.69e-16 | 76.3 |
Find 48 sgRNAs with CRISPR-Local
Find 510 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTCCTGTTTAAGCAATT+TGG | 0.066216 | 6_1:+15629904 | None:intergenic |
| ACACCATTCTTCTATTAATA+AGG | 0.255956 | 6_1:-15628650 | Msa0876960:CDS |
| TGTTCCTGTTTAAGCAATTT+GGG | 0.275034 | 6_1:+15629905 | None:intergenic |
| ATTGAAGCAACTTCAACTTT+TGG | 0.327143 | 6_1:-15635058 | Msa0876960:intron |
| AGCATATCTAAACTTGGCTT+TGG | 0.330269 | 6_1:-15635250 | Msa0876960:CDS |
| TTCTTCACATGATTGGTGTT+AGG | 0.341495 | 6_1:-15634484 | Msa0876960:CDS |
| TGAAACAGATTTCAGATGAA+TGG | 0.353933 | 6_1:-15628699 | Msa0876960:intron |
| AATTTCAGGAGAATTGAAAA+TGG | 0.354607 | 6_1:-15634585 | Msa0876960:intron |
| TAGAGAAGCCTCTGCTCTCT+TGG | 0.368216 | 6_1:+15634536 | None:intergenic |
| TCACTACAATCCTTCTCAAT+TGG | 0.382631 | 6_1:+15635208 | None:intergenic |
| TCTTCACATGATTGGTGTTA+GGG | 0.396279 | 6_1:-15634483 | Msa0876960:CDS |
| TTGGCCCAAATTGCTTAAAC+AGG | 0.414526 | 6_1:-15629909 | Msa0876960:CDS |
| AATGAATTTCTTCACATGAT+TGG | 0.414769 | 6_1:-15634491 | Msa0876960:CDS |
| CAGGGGTGGGGTTCACGTAA+TGG | 0.463365 | 6_1:-15630010 | Msa0876960:CDS |
| AGAGAGAGTAACAAAAGTGT+TGG | 0.471291 | 6_1:-15635133 | Msa0876960:CDS |
| TATTGTGAGAGAAAACATAA+AGG | 0.478074 | 6_1:-15635338 | None:intergenic |
| TGTAGAAGCATATCTAAACT+TGG | 0.485899 | 6_1:-15635256 | Msa0876960:CDS |
| GCTACCAACGTGCATGTTGT+TGG | 0.486044 | 6_1:-15628574 | Msa0876960:CDS |
| GTAAGCTTCATGAGGAAGAT+TGG | 0.487258 | 6_1:-15629928 | Msa0876960:CDS |
| TGAAAATAGTGAAATCGAAT+GGG | 0.493131 | 6_1:-15635188 | Msa0876960:CDS |
| GTGAAAATAGTGAAATCGAA+TGG | 0.497284 | 6_1:-15635189 | Msa0876960:CDS |
| GAAAATCCTTGGCAGGGGTG+GGG | 0.504127 | 6_1:-15630022 | Msa0876960:intron |
| AAATCACCTTGTTGTACAGC+TGG | 0.510321 | 6_1:+15628523 | None:intergenic |
| CGTCCTTATTAATAGAAGAA+TGG | 0.516462 | 6_1:+15628647 | None:intergenic |
| TCAGATGAATGGAAAGATGA+AGG | 0.541811 | 6_1:-15628688 | Msa0876960:CDS |
| ATCGAATGGGAACTTAGGCC+TGG | 0.546005 | 6_1:-15635175 | Msa0876960:CDS |
| GGTAGCTTCCTTGCAACTAG+TGG | 0.546500 | 6_1:+15628591 | None:intergenic |
| AAAATAAGATGATGAAGTTG+AGG | 0.552877 | 6_1:-15635291 | Msa0876960:exon |
| ATTGCTTAAACAGGAACAGA+AGG | 0.556336 | 6_1:-15629900 | Msa0876960:intron |
| TGATGAAGTTGAGGTCAAAG+AGG | 0.559715 | 6_1:-15635282 | Msa0876960:CDS |
| GAGCAGAGGCTTCTCTACAA+AGG | 0.569914 | 6_1:-15634530 | Msa0876960:CDS |
| TTCTCTACAAAGGTAAAGAG+AGG | 0.582260 | 6_1:-15634520 | Msa0876960:CDS |
| GAGTTTCAACTATGTCAAAG+TGG | 0.599297 | 6_1:-15635093 | Msa0876960:CDS |
| AGTAAGCAATGGTTCTCCCT+CGG | 0.605795 | 6_1:-15628548 | Msa0876960:CDS |
| AGTAGCATCTCCAATTGAGA+AGG | 0.608005 | 6_1:-15635218 | Msa0876960:CDS |
| TCATGCACGTAATAAACAGA+AGG | 0.608020 | 6_1:-15629981 | Msa0876960:CDS |
| TTGTTGTACAGCTGGTACCG+AGG | 0.612068 | 6_1:+15628531 | None:intergenic |
| GTGAAATCGAATGGGAACTT+AGG | 0.612081 | 6_1:-15635180 | Msa0876960:CDS |
| TGGTGTTAGGGACAAAGACA+AGG | 0.613407 | 6_1:-15634471 | Msa0876960:intron |
| GTTGTTGGATCAGTAAGCAA+TGG | 0.618849 | 6_1:-15628559 | Msa0876960:CDS |
| TGTTGTACAGCTGGTACCGA+GGG | 0.621251 | 6_1:+15628532 | None:intergenic |
| GTTTAGAGCCAAGAGAGCAG+AGG | 0.629869 | 6_1:-15634544 | Msa0876960:CDS |
| GGATGATGCCACTAGTTGCA+AGG | 0.632166 | 6_1:-15628599 | Msa0876960:CDS |
| TCTCTACAAAGGTAAAGAGA+GGG | 0.650942 | 6_1:-15634519 | Msa0876960:CDS |
| TCGGTACCAGCTGTACAACA+AGG | 0.670510 | 6_1:-15628529 | None:intergenic |
| TGATGCACGTAAGCTTCATG+AGG | 0.676238 | 6_1:-15629936 | Msa0876960:CDS |
| GAATGGGAACTTAGGCCTGG+TGG | 0.713354 | 6_1:-15635172 | Msa0876960:CDS |
| TGATCCAACAACATGCACGT+TGG | 0.714323 | 6_1:+15628570 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATTAATATTAAATAA+AGG | - | chr6_1:15630894-15630913 | Msa0876960:intron | 0.0% |
| !! | AAAAATTAATATTAAATAAA+GGG | - | chr6_1:15630895-15630914 | Msa0876960:intron | 0.0% |
| !!! | AATAATATTGATAATCTATT+TGG | + | chr6_1:15630312-15630331 | None:intergenic | 10.0% |
| !! | TTACTTGAACAATTATATTT+AGG | - | chr6_1:15628891-15628910 | Msa0876960:intron | 15.0% |
| !! | TTGTACATTAACATAAAATA+TGG | - | chr6_1:15628942-15628961 | Msa0876960:intron | 15.0% |
| !!! | AATTTTTATGAATGAATTTC+AGG | - | chr6_1:15629263-15629282 | Msa0876960:intron | 15.0% |
| !! | AATTATTATTATCTAGTAGT+TGG | - | chr6_1:15629737-15629756 | Msa0876960:intron | 15.0% |
| !! | AAAAAATTGTGCAATAAAAA+AGG | + | chr6_1:15629855-15629874 | None:intergenic | 15.0% |
| !!! | CTACTATTTAACTATTTTAT+TGG | + | chr6_1:15630028-15630047 | None:intergenic | 15.0% |
| !!! | TTTTATTTCTTCTTTATGTT+TGG | + | chr6_1:15630113-15630132 | None:intergenic | 15.0% |
| !! | AAGAAAATAAAATCTAACAA+TGG | - | chr6_1:15630221-15630240 | Msa0876960:intron | 15.0% |
| !! | TAGCCAAAAAATAATTTAAT+GGG | - | chr6_1:15630372-15630391 | Msa0876960:intron | 15.0% |
| !!! | TTCAAGTTTTTTTTTACTTT+TGG | - | chr6_1:15630423-15630442 | Msa0876960:intron | 15.0% |
| !!! | TCAAGTTTTTTTTTACTTTT+GGG | - | chr6_1:15630424-15630443 | Msa0876960:intron | 15.0% |
| !! | ATTAATATTAAATAAAGGGT+CGG | - | chr6_1:15630899-15630918 | Msa0876960:intron | 15.0% |
| !! | ATATAATGTTAGTTACATAT+TGG | + | chr6_1:15631883-15631902 | None:intergenic | 15.0% |
| !!! | TATTGATTTTATCTTTCATT+TGG | - | chr6_1:15632009-15632028 | Msa0876960:intron | 15.0% |
| !! | TAAAAATATATGAGAAATGA+AGG | - | chr6_1:15632253-15632272 | Msa0876960:intron | 15.0% |
| !! | TAATATAAACATGAATAAAG+TGG | + | chr6_1:15632985-15633004 | None:intergenic | 15.0% |
| !! | ATTCATGTTTATATTAAAGA+AGG | - | chr6_1:15632989-15633008 | Msa0876960:intron | 15.0% |
| !! | ATATAATCTTAGTTAAATGT+TGG | + | chr6_1:15633356-15633375 | None:intergenic | 15.0% |
| !! | AGATTATATAGATAGATTAA+TGG | - | chr6_1:15633367-15633386 | Msa0876960:intron | 15.0% |
| !!! | AAAAAGAAACAAAGTTTTTA+AGG | + | chr6_1:15634076-15634095 | None:intergenic | 15.0% |
| !! | TAATTTAAACCCAAAACAAA+AGG | + | chr6_1:15628864-15628883 | None:intergenic | 20.0% |
| !!! | ATAATAATGCAAGACTTTTT+TGG | + | chr6_1:15629203-15629222 | None:intergenic | 20.0% |
| !! | CAACTATAAAAATTACTTTG+AGG | - | chr6_1:15629228-15629247 | Msa0876960:intron | 20.0% |
| !! | TCATATTATACACAAATTGT+AGG | + | chr6_1:15629497-15629516 | None:intergenic | 20.0% |
| !! | TGAAATGATCTTATAAAAAG+AGG | + | chr6_1:15629988-15630007 | None:intergenic | 20.0% |
| !! | TTTGAACTAACAAAATTGTT+TGG | - | chr6_1:15630347-15630366 | Msa0876960:intron | 20.0% |
| !! | GTAGCCAAAAAATAATTTAA+TGG | - | chr6_1:15630371-15630390 | Msa0876960:intron | 20.0% |
| !! | AGCCAAAAAATAATTTAATG+GGG | - | chr6_1:15630373-15630392 | Msa0876960:intron | 20.0% |
| !!! | TACCCCATTAAATTATTTTT+TGG | + | chr6_1:15630378-15630397 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTTTTTACTTTTG+GGG | - | chr6_1:15630425-15630444 | Msa0876960:intron | 20.0% |
| !!! | ACAAAACTTTGTTTTGTATA+TGG | + | chr6_1:15630773-15630792 | None:intergenic | 20.0% |
| !! | TCATATAAACATGAATAAAG+TGG | + | chr6_1:15631505-15631524 | None:intergenic | 20.0% |
| !! | ATTCATGTTTATATGAAAGA+AGG | - | chr6_1:15631509-15631528 | Msa0876960:intron | 20.0% |
| !!! | TACACAAACATATTTTTTTG+TGG | - | chr6_1:15631830-15631849 | Msa0876960:intron | 20.0% |
| !!! | AAATATATGACATTTTGTGA+TGG | - | chr6_1:15631912-15631931 | Msa0876960:intron | 20.0% |
| !!! | TCTTTGATTTTTACTAAGAT+GGG | + | chr6_1:15632211-15632230 | None:intergenic | 20.0% |
| !!! | TTCTTTGATTTTTACTAAGA+TGG | + | chr6_1:15632212-15632231 | None:intergenic | 20.0% |
| !! | ATTAGTGGAATGTAAATATT+GGG | + | chr6_1:15632369-15632388 | None:intergenic | 20.0% |
| !! | AATTAGTGGAATGTAAATAT+TGG | + | chr6_1:15632370-15632389 | None:intergenic | 20.0% |
| !!! | AGATTATTTGTTGGTTATTT+CGG | + | chr6_1:15633143-15633162 | None:intergenic | 20.0% |
| !! | TGTGTATTATCTACAAAAAA+AGG | + | chr6_1:15633296-15633315 | None:intergenic | 20.0% |
| !! | TTATATAGATAGATTAATGG+AGG | - | chr6_1:15633370-15633389 | Msa0876960:intron | 20.0% |
| !! | TTAACGGAAGATTTATATTT+AGG | + | chr6_1:15634536-15634555 | None:intergenic | 20.0% |
| !!! | TTCCGTTAATGATTTTATTT+GGG | - | chr6_1:15634547-15634566 | Msa0876960:CDS | 20.0% |
| !!! | ATTTTCAACTTATTGAAGAA+TGG | - | chr6_1:15635019-15635038 | Msa0876960:intron | 20.0% |
| !!! | TTTTCAACTTATTGAAGAAT+GGG | - | chr6_1:15635020-15635039 | Msa0876960:intron | 20.0% |
| ! | AAAATAAGATGATGAAGTTG+AGG | - | chr6_1:15628571-15628590 | Msa0876960:CDS | 25.0% |
| ! | TGAAAATAGTGAAATCGAAT+GGG | - | chr6_1:15628674-15628693 | Msa0876960:CDS | 25.0% |
| ! | AATCAATACAAATGAAAGGT+TGG | + | chr6_1:15628840-15628859 | None:intergenic | 25.0% |
| !!! | TATTGATTGCCTTTTGTTTT+GGG | - | chr6_1:15628852-15628871 | Msa0876960:intron | 25.0% |
| ! | GAGTTATTACGAAAATTTGT+TGG | - | chr6_1:15628972-15628991 | Msa0876960:intron | 25.0% |
| ! | AATTTCAGGAGAATTGAAAA+TGG | - | chr6_1:15629277-15629296 | Msa0876960:intron | 25.0% |
| !!! | ATTGAAAATGGTTTTGTCAT+TGG | - | chr6_1:15629289-15629308 | Msa0876960:intron | 25.0% |
| ! | AATGAATTTCTTCACATGAT+TGG | - | chr6_1:15629371-15629390 | Msa0876960:intron | 25.0% |
| !!! | GTTTCACTTTTGTTATTTTC+TGG | + | chr6_1:15629644-15629663 | None:intergenic | 25.0% |
| ! | TGATTTAAAAATGTGTAAGC+TGG | - | chr6_1:15629774-15629793 | Msa0876960:intron | 25.0% |
| ! | ATCATTTCAAAAGCTTCAAT+TGG | - | chr6_1:15629999-15630018 | Msa0876960:CDS | 25.0% |
| ! | TCATTTCAAAAGCTTCAATT+GGG | - | chr6_1:15630000-15630019 | Msa0876960:CDS | 25.0% |
| !! | TTTATACAAGTTGAGTTGTA+TGG | - | chr6_1:15630247-15630266 | Msa0876960:intron | 25.0% |
| !! | ATTTGGTTTAGTGTCTATTA+TGG | + | chr6_1:15630295-15630314 | None:intergenic | 25.0% |
| !!! | GAATATTTTTCAGTCATTGA+TGG | - | chr6_1:15630518-15630537 | Msa0876960:intron | 25.0% |
| ! | TCAACAAAGTTATCATCTAA+TGG | + | chr6_1:15630597-15630616 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr6_1:15630623-15630642 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr6_1:15630622-15630641 | Msa0876960:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr6_1:15630635-15630654 | Msa0876960:intron | 25.0% |
| ! | TGCTTAAGAAAAGTTCAATT+TGG | - | chr6_1:15630981-15631000 | Msa0876960:intron | 25.0% |
| ! | CCAAAAAAAATCACACATTT+GGG | + | chr6_1:15631188-15631207 | None:intergenic | 25.0% |
| ! | ACCAAAAAAAATCACACATT+TGG | + | chr6_1:15631189-15631208 | None:intergenic | 25.0% |
| ! | TAAACATGAATAAAGTGGTT+TGG | + | chr6_1:15631500-15631519 | None:intergenic | 25.0% |
| ! | ATTACTTTAAATTCTCCCTT+TGG | + | chr6_1:15631721-15631740 | None:intergenic | 25.0% |
| ! | TGTGTACTATCTACAAAAAA+AGG | + | chr6_1:15631816-15631835 | None:intergenic | 25.0% |
| !!! | TTATGTAACGTCATTTTTTG+TGG | - | chr6_1:15631857-15631876 | Msa0876960:intron | 25.0% |
| ! | TTTCACTTCACAAAAGTTTA+TGG | + | chr6_1:15632057-15632076 | None:intergenic | 25.0% |
| ! | TTAGTGGAATGTAAATATTG+GGG | + | chr6_1:15632368-15632387 | None:intergenic | 25.0% |
| !!! | TTGAGCTTTTTAAAACTAGA+CGG | - | chr6_1:15632441-15632460 | Msa0876960:intron | 25.0% |
| ! | AGATAAGTAGTTGACATTAT+CGG | - | chr6_1:15632810-15632829 | Msa0876960:intron | 25.0% |
| ! | TAAACATGAATAAAGTGGTT+TGG | + | chr6_1:15631500-15631519 | None:intergenic | 25.0% |
| ! | ATTGGATTGAGATTATTTGT+TGG | + | chr6_1:15633152-15633171 | None:intergenic | 25.0% |
| !!! | AAATTCTCCTTTTGGTTTTT+CGG | + | chr6_1:15633194-15633213 | None:intergenic | 25.0% |
| !! | ATTACTTCAAATTCTCCTTT+TGG | + | chr6_1:15633202-15633221 | None:intergenic | 25.0% |
| ! | ATAAAAAAAACATGAGTGAG+AGG | - | chr6_1:15633395-15633414 | Msa0876960:intron | 25.0% |
| !!! | TGAAAGCTTTAAATAATGTG+TGG | - | chr6_1:15634258-15634277 | Msa0876960:intron | 25.0% |
| ! | CTTTAAATAATGTGTGGTTT+GGG | - | chr6_1:15634264-15634283 | Msa0876960:intron | 25.0% |
| ! | TTTAAATAATGTGTGGTTTG+GGG | - | chr6_1:15634265-15634284 | Msa0876960:intron | 25.0% |
| !! | CTTCCGTTAATGATTTTATT+TGG | - | chr6_1:15634546-15634565 | Msa0876960:CDS | 25.0% |
| ! | AGCCCAAATAAAATCATTAA+CGG | + | chr6_1:15634552-15634571 | None:intergenic | 25.0% |
| ! | AAAATCATCCTTTGTAAAAC+TGG | + | chr6_1:15634616-15634635 | None:intergenic | 25.0% |
| ! | CTTTGGATATTATTCATACT+CGG | - | chr6_1:15634965-15634984 | Msa0876960:intron | 25.0% |
| ! | TTTGGATATTATTCATACTC+GGG | - | chr6_1:15634966-15634985 | Msa0876960:intron | 25.0% |
| !! | CAATAAGTTGAAAATCGAAA+AGG | + | chr6_1:15635014-15635033 | None:intergenic | 25.0% |
| ! | TTTCAACTTATTGAAGAATG+GGG | - | chr6_1:15635021-15635040 | Msa0876960:intron | 25.0% |
| ! | ACACCATTCTTCTATTAATA+AGG | - | chr6_1:15635212-15635231 | Msa0876960:CDS | 25.0% |
| !!! | TACTTTTTGCAAGGAAAATA+AGG | - | chr6_1:15635242-15635261 | Msa0876960:CDS | 25.0% |
| ! | TGTAGAAGCATATCTAAACT+TGG | - | chr6_1:15628606-15628625 | Msa0876960:CDS | 30.0% |
| GTGAAAATAGTGAAATCGAA+TGG | - | chr6_1:15628673-15628692 | Msa0876960:CDS | 30.0% | |
| ! | ATTGAAGCAACTTCAACTTT+TGG | - | chr6_1:15628804-15628823 | Msa0876960:intron | 30.0% |
| AGGCAATCAATACAAATGAA+AGG | + | chr6_1:15628844-15628863 | None:intergenic | 30.0% | |
| !!! | GTATTGATTGCCTTTTGTTT+TGG | - | chr6_1:15628851-15628870 | Msa0876960:intron | 30.0% |
| !! | TCTCCATTTTTAAGAGTTAG+AGG | - | chr6_1:15629093-15629112 | Msa0876960:intron | 30.0% |
| !! | CTCCATTTTTAAGAGTTAGA+GGG | - | chr6_1:15629094-15629113 | Msa0876960:intron | 30.0% |
| AACCCTCTAACTCTTAAAAA+TGG | + | chr6_1:15629099-15629118 | None:intergenic | 30.0% | |
| TATACACAAATTGTAGGACA+AGG | + | chr6_1:15629491-15629510 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr6_1:15630648-15630667 | Msa0876960:intron | 30.0% | |
| GACTTTAAGCCTCAAAATTT+CGG | - | chr6_1:15630948-15630967 | Msa0876960:intron | 30.0% | |
| ACTTTAAGCCTCAAAATTTC+GGG | - | chr6_1:15630949-15630968 | Msa0876960:intron | 30.0% | |
| GGGTATGAACAAAATTGTTT+GGG | + | chr6_1:15631036-15631055 | None:intergenic | 30.0% | |
| TGGGTATGAACAAAATTGTT+TGG | + | chr6_1:15631037-15631056 | None:intergenic | 30.0% | |
| !!! | TATTTTTGGAAGTTTGGGTT+GGG | + | chr6_1:15631056-15631075 | None:intergenic | 30.0% |
| !!! | TTATTTTTGGAAGTTTGGGT+TGG | + | chr6_1:15631057-15631076 | None:intergenic | 30.0% |
| !!! | CCCAAATGTGTGATTTTTTT+TGG | - | chr6_1:15631185-15631204 | Msa0876960:intron | 30.0% |
| AAAGCTTGAGTGTAAATCAT+TGG | - | chr6_1:15631212-15631231 | Msa0876960:intron | 30.0% | |
| GTAAATCATTGGAAAACGTT+AGG | - | chr6_1:15631223-15631242 | Msa0876960:intron | 30.0% | |
| !! | TGATTTGTTGGTTATTTCAG+CGG | + | chr6_1:15631659-15631678 | None:intergenic | 30.0% |
| ! | ATTGGATTGAGATGATTTGT+TGG | + | chr6_1:15631671-15631690 | None:intergenic | 30.0% |
| !!! | AAATTCTCCCTTTGGTTTTT+CGG | + | chr6_1:15631713-15631732 | None:intergenic | 30.0% |
| TATCTAACTAGCTAGTGATA+TGG | + | chr6_1:15631764-15631783 | None:intergenic | 30.0% | |
| !! | GTTGATAGCTTCATAATTAG+TGG | + | chr6_1:15632384-15632403 | None:intergenic | 30.0% |
| TTTCTCATGTAAATGTAGCT+CGG | + | chr6_1:15632406-15632425 | None:intergenic | 30.0% | |
| ! | CTATTTATGAGAAGGTGTAA+AGG | + | chr6_1:15632773-15632792 | None:intergenic | 30.0% |
| TTACACCTTCTCATAAATAG+TGG | - | chr6_1:15632773-15632792 | Msa0876960:intron | 30.0% | |
| ! | TTATTTGTTGGTTATTTCGG+CGG | + | chr6_1:15633140-15633159 | None:intergenic | 30.0% |
| !!! | AATTCTCCTTTTGGTTTTTC+GGG | + | chr6_1:15633193-15633212 | None:intergenic | 30.0% |
| !!! | AAGCTATGACACTTTTTTGT+CGG | - | chr6_1:15631783-15631802 | Msa0876960:intron | 30.0% |
| TAAATGTTGGCCACAAAAAA+TGG | + | chr6_1:15633343-15633362 | None:intergenic | 30.0% | |
| !!! | AAAGGAGTTTTTTGATTCAG+AGG | - | chr6_1:15633740-15633759 | Msa0876960:intron | 30.0% |
| ACATACAAACACAATCATTG+TGG | - | chr6_1:15633813-15633832 | Msa0876960:intron | 30.0% | |
| TGTTCCTGTTTAAGCAATTT+GGG | + | chr6_1:15633960-15633979 | None:intergenic | 30.0% | |
| ! | TATTTTACGAATGTACCAGA+AGG | - | chr6_1:15634095-15634114 | Msa0876960:intron | 30.0% |
| ! | GTATTTCCAATGTCTTGTTA+CGG | - | chr6_1:15634117-15634136 | Msa0876960:intron | 30.0% |
| ! | GCTTTAAATAATGTGTGGTT+TGG | - | chr6_1:15634263-15634282 | Msa0876960:intron | 30.0% |
| ! | TAGGTTTGGTAAAAAGAAGT+CGG | - | chr6_1:15634322-15634341 | Msa0876960:intron | 30.0% |
| TGAGGGAGAAAAAATTAAAG+AGG | - | chr6_1:15634361-15634380 | Msa0876960:intron | 30.0% | |
| GAGGGAGAAAAAATTAAAGA+GGG | - | chr6_1:15634362-15634381 | Msa0876960:intron | 30.0% | |
| !! | TGATTTTATTTGGGCTTTGA+AGG | - | chr6_1:15634556-15634575 | Msa0876960:CDS | 30.0% |
| ! | AAGCTATACCAGTTTTACAA+AGG | - | chr6_1:15634605-15634624 | Msa0876960:intron | 30.0% |
| AAGTTATGTGTACTTGATGT+TGG | - | chr6_1:15634865-15634884 | Msa0876960:intron | 30.0% | |
| TGAAACAGATTTCAGATGAA+TGG | - | chr6_1:15635163-15635182 | Msa0876960:CDS | 30.0% | |
| CGTCCTTATTAATAGAAGAA+TGG | + | chr6_1:15635218-15635237 | None:intergenic | 30.0% | |
| AGCATATCTAAACTTGGCTT+TGG | - | chr6_1:15628612-15628631 | Msa0876960:CDS | 35.0% | |
| TCACTACAATCCTTCTCAAT+TGG | + | chr6_1:15628657-15628676 | None:intergenic | 35.0% | |
| ! | AGAGAGAGTAACAAAAGTGT+TGG | - | chr6_1:15628729-15628748 | Msa0876960:intron | 35.0% |
| GAGTTTCAACTATGTCAAAG+TGG | - | chr6_1:15628769-15628788 | Msa0876960:intron | 35.0% | |
| TTCTCTACAAAGGTAAAGAG+AGG | - | chr6_1:15629342-15629361 | Msa0876960:intron | 35.0% | |
| TCTCTACAAAGGTAAAGAGA+GGG | - | chr6_1:15629343-15629362 | Msa0876960:intron | 35.0% | |
| ! | TTCTTCACATGATTGGTGTT+AGG | - | chr6_1:15629378-15629397 | Msa0876960:intron | 35.0% |
| !! | TCTTCACATGATTGGTGTTA+GGG | - | chr6_1:15629379-15629398 | Msa0876960:intron | 35.0% |
| ATCAAGGAAATGAAGCTACT+TGG | - | chr6_1:15629437-15629456 | Msa0876960:intron | 35.0% | |
| GATCTAGCATTCACACATTT+GGG | + | chr6_1:15629553-15629572 | None:intergenic | 35.0% | |
| AGATCTAGCATTCACACATT+TGG | + | chr6_1:15629554-15629573 | None:intergenic | 35.0% | |
| TAGCAAACTCCAACATAACA+TGG | + | chr6_1:15629807-15629826 | None:intergenic | 35.0% | |
| GTGCACACCAATGATTAAAA+GGG | - | chr6_1:15629936-15629955 | Msa0876960:CDS | 35.0% | |
| TGCACACCAATGATTAAAAG+GGG | - | chr6_1:15629937-15629956 | Msa0876960:CDS | 35.0% | |
| ! | ATTCTGCCCCTTTTAATCAT+TGG | + | chr6_1:15629946-15629965 | None:intergenic | 35.0% |
| TTAAAGTTGCTTCCAAGCAA+GGG | + | chr6_1:15630486-15630505 | None:intergenic | 35.0% | |
| ATTAAAGTTGCTTCCAAGCA+AGG | + | chr6_1:15630487-15630506 | None:intergenic | 35.0% | |
| !! | TCATTGATGGACTCAGTATT+TGG | - | chr6_1:15630531-15630550 | Msa0876960:intron | 35.0% |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr6_1:15630715-15630734 | Msa0876960:intron | 35.0% | |
| !!! | AGCCACTTTTTGACAACTTT+TGG | + | chr6_1:15630720-15630739 | None:intergenic | 35.0% |
| TGAGGCTTAAAGTCTTAGAT+TGG | + | chr6_1:15630942-15630961 | None:intergenic | 35.0% | |
| ! | TTTCTTGACCCGAAATTTTG+AGG | + | chr6_1:15630960-15630979 | None:intergenic | 35.0% |
| !!! | GGGGTTATTTTTGGAAGTTT+GGG | + | chr6_1:15631061-15631080 | None:intergenic | 35.0% |
| !!! | TGGGGTTATTTTTGGAAGTT+TGG | + | chr6_1:15631062-15631081 | None:intergenic | 35.0% |
| ! | TGTTAGCCTAAAAACAGGAA+TGG | + | chr6_1:15631109-15631128 | None:intergenic | 35.0% |
| ! | AATCACACATTTGGGTGTTT+TGG | + | chr6_1:15631180-15631199 | None:intergenic | 35.0% |
| !! | GAAGGTGTAAAGGTGTTAAA+TGG | + | chr6_1:15631296-15631315 | None:intergenic | 35.0% |
| ! | CTATTTGTGAGAAGGTGTAA+AGG | + | chr6_1:15631306-15631325 | None:intergenic | 35.0% |
| TTACACCTTCTCACAAATAG+TGG | - | chr6_1:15631306-15631325 | Msa0876960:intron | 35.0% | |
| AGATACGTAGTTGACATTAC+CGG | - | chr6_1:15631343-15631362 | Msa0876960:intron | 35.0% | |
| AGTCTCACATATACCTCTTT+CGG | + | chr6_1:15631411-15631430 | None:intergenic | 35.0% | |
| ! | TTCGTACAAGACGAAAGTAT+TGG | + | chr6_1:15631539-15631558 | None:intergenic | 35.0% |
| GAAGAATCACAAGATTGATG+AGG | - | chr6_1:15631562-15631581 | Msa0876960:intron | 35.0% | |
| TTCAAAGACCTCATGTCTAA+GGG | - | chr6_1:15631626-15631645 | Msa0876960:intron | 35.0% | |
| !!! | AATTCTCCCTTTGGTTTTTC+GGG | + | chr6_1:15631712-15631731 | None:intergenic | 35.0% |
| CTTAATCTTCCTCTTGAAAG+CGG | + | chr6_1:15632127-15632146 | None:intergenic | 35.0% | |
| CTTCAACTCATTCAACTTGT+CGG | + | chr6_1:15632166-15632185 | None:intergenic | 35.0% | |
| ATTGTAAGTGAGGAGAAGTT+GGG | - | chr6_1:15632330-15632349 | Msa0876960:intron | 35.0% | |
| ! | TGTTAGCCTAAAAACAGGAA+TGG | + | chr6_1:15631109-15631128 | None:intergenic | 35.0% |
| AAAGCTTGAGTGCAAATCAA+TGG | - | chr6_1:15632681-15632700 | Msa0876960:intron | 35.0% | |
| TTCCACCACTATTTATGAGA+AGG | + | chr6_1:15632781-15632800 | None:intergenic | 35.0% | |
| AGTCTCATACATACCTCTTT+CGG | + | chr6_1:15632891-15632910 | None:intergenic | 35.0% | |
| TTCAAAGACCTCATGTCTAA+GGG | - | chr6_1:15631626-15631645 | Msa0876960:intron | 35.0% | |
| AGTGGGAGTTTCACATAAAT+TGG | + | chr6_1:15633170-15633189 | None:intergenic | 35.0% | |
| !!! | TCGATTAACGCCATTTTTTG+TGG | - | chr6_1:15633330-15633349 | Msa0876960:intron | 35.0% |
| ATTGTGGCAATGAAAATCCT+TGG | - | chr6_1:15633829-15633848 | Msa0876960:intron | 35.0% | |
| TCATGCACGTAATAAACAGA+AGG | - | chr6_1:15633881-15633900 | Msa0876960:intron | 35.0% | |
| CTGTTCCTGTTTAAGCAATT+TGG | + | chr6_1:15633961-15633980 | None:intergenic | 35.0% | |
| ATTGCTTAAACAGGAACAGA+AGG | - | chr6_1:15633962-15633981 | Msa0876960:intron | 35.0% | |
| AAGACATTGGAAATACCTTC+TGG | + | chr6_1:15634113-15634132 | None:intergenic | 35.0% | |
| !!! | TTTTGAGGTTTGTGGTCAAA+TGG | - | chr6_1:15634145-15634164 | Msa0876960:intron | 35.0% |
| TCAAATGGAGGATGTATATC+TGG | - | chr6_1:15634160-15634179 | Msa0876960:intron | 35.0% | |
| TTACTGTAAAGTTCGAGATG+TGG | - | chr6_1:15634226-15634245 | Msa0876960:intron | 35.0% | |
| !!! | GTAGCTAGTTTTGATAGGTT+TGG | - | chr6_1:15634308-15634327 | Msa0876960:intron | 35.0% |
| TGTTAAGGTGCAATCTAATC+AGG | - | chr6_1:15634502-15634521 | Msa0876960:CDS | 35.0% | |
| ! | CAAAGGATGATTTTTGATGC+AGG | - | chr6_1:15634622-15634641 | Msa0876960:intron | 35.0% |
| !! | AAGCTTGCTATTATTCCGTT+GGG | - | chr6_1:15634652-15634671 | Msa0876960:intron | 35.0% |
| TGGAATAAGGATACGTTGAT+TGG | - | chr6_1:15634778-15634797 | Msa0876960:intron | 35.0% | |
| !!! | AGATCGTTTTGATTATGCGA+GGG | - | chr6_1:15634924-15634943 | Msa0876960:intron | 35.0% |
| TGAAGAATGGGGTTATTCAT+TGG | - | chr6_1:15635032-15635051 | Msa0876960:intron | 35.0% | |
| GAAGAATGGGGTTATTCATT+GGG | - | chr6_1:15635033-15635052 | Msa0876960:intron | 35.0% | |
| GTGACACTTCATCATCTATA+AGG | + | chr6_1:15635071-15635090 | None:intergenic | 35.0% | |
| TCAGATGAATGGAAAGATGA+AGG | - | chr6_1:15635174-15635193 | Msa0876960:CDS | 35.0% | |
| TGATGAAGTTGAGGTCAAAG+AGG | - | chr6_1:15628580-15628599 | Msa0876960:CDS | 40.0% | |
| AGTAGCATCTCCAATTGAGA+AGG | - | chr6_1:15628644-15628663 | Msa0876960:CDS | 40.0% | |
| GTGAAATCGAATGGGAACTT+AGG | - | chr6_1:15628682-15628701 | Msa0876960:CDS | 40.0% | |
| TAATTCAAAGTTCCGCCGTA+CGG | + | chr6_1:15629068-15629087 | None:intergenic | 40.0% | |
| TCTAGAAGATCCAGCTATCA+AGG | - | chr6_1:15629421-15629440 | Msa0876960:intron | 40.0% | |
| ! | AGCTTCATTTCCTTGATAGC+TGG | + | chr6_1:15629434-15629453 | None:intergenic | 40.0% |
| GGAAATGAAGCTACTTGGTT+TGG | - | chr6_1:15629442-15629461 | Msa0876960:intron | 40.0% | |
| TGAATGCTAGATCTGATTGC+AGG | - | chr6_1:15629560-15629579 | Msa0876960:intron | 40.0% | |
| CTTCGAGTGTATCGTGAATT+TGG | + | chr6_1:15629590-15629609 | None:intergenic | 40.0% | |
| CGTGCACACCAATGATTAAA+AGG | - | chr6_1:15629935-15629954 | Msa0876960:CDS | 40.0% | |
| ! | AAGCTACCACAATTTTTGCG+AGG | - | chr6_1:15630084-15630103 | Msa0876960:intron | 40.0% |
| ! | AGCTACCACAATTTTTGCGA+GGG | - | chr6_1:15630085-15630104 | Msa0876960:intron | 40.0% |
| TTAAATAAAGGGTCGGCCTT+AGG | - | chr6_1:15630906-15630925 | Msa0876960:intron | 40.0% | |
| TAAATAAAGGGTCGGCCTTA+GGG | - | chr6_1:15630907-15630926 | Msa0876960:intron | 40.0% | |
| !! | TGCGATCCATTCCTGTTTTT+AGG | - | chr6_1:15631100-15631119 | Msa0876960:intron | 40.0% |
| ! | TAGTGTGTGTGTTTGAAGTG+TGG | + | chr6_1:15631141-15631160 | None:intergenic | 40.0% |
| TTCCACCACTATTTGTGAGA+AGG | + | chr6_1:15631314-15631333 | None:intergenic | 40.0% | |
| AACTTGACATTACCCGAAAG+AGG | - | chr6_1:15631395-15631414 | Msa0876960:intron | 40.0% | |
| GTCTCACATATACCTCTTTC+GGG | + | chr6_1:15631410-15631429 | None:intergenic | 40.0% | |
| TAAGCCTATCCACATGATGT+GGG | + | chr6_1:15631474-15631493 | None:intergenic | 40.0% | |
| TTAAGCCTATCCACATGATG+TGG | + | chr6_1:15631475-15631494 | None:intergenic | 40.0% | |
| TACTTTCGTCTTGTACGAAG+TGG | - | chr6_1:15631540-15631559 | Msa0876960:intron | 40.0% | |
| GTTCAAAGACCTCATGTCTA+AGG | - | chr6_1:15631625-15631644 | Msa0876960:intron | 40.0% | |
| TCAAAGACCTCATGTCTAAG+GGG | - | chr6_1:15631627-15631646 | Msa0876960:intron | 40.0% | |
| ! | GTTGGTTATTTCAGCGGTTT+CGG | + | chr6_1:15631653-15631672 | None:intergenic | 40.0% |
| !! | AGTGGGAGTGTCACATAAAT+TGG | + | chr6_1:15631689-15631708 | None:intergenic | 40.0% |
| CGCTTTCAAGAGGAAGATTA+AGG | - | chr6_1:15632125-15632144 | Msa0876960:intron | 40.0% | |
| CATTGTAAGTGAGGAGAAGT+TGG | - | chr6_1:15632329-15632348 | Msa0876960:intron | 40.0% | |
| !! | TGCGATCCATTCCTGTTTTT+AGG | - | chr6_1:15631100-15631119 | Msa0876960:intron | 40.0% |
| ! | AGTTGTGTGTGTTTGAAGTG+TGG | + | chr6_1:15632591-15632610 | None:intergenic | 40.0% |
| !! | ACACACACTTTTGGGTGTTT+TGG | + | chr6_1:15632628-15632647 | None:intergenic | 40.0% |
| ! | ACACACACACACACACTTTT+GGG | + | chr6_1:15632636-15632655 | None:intergenic | 40.0% |
| GAGCGTAAAAACTTACTTCC+TGG | + | chr6_1:15632713-15632732 | None:intergenic | 40.0% | |
| !! | GAAGGTGTAAAGGTGTTAGA+TGG | + | chr6_1:15632763-15632782 | None:intergenic | 40.0% |
| CACCTTCTCATAAATAGTGG+TGG | - | chr6_1:15632776-15632795 | Msa0876960:intron | 40.0% | |
| GTCTCATACATACCTCTTTC+GGG | + | chr6_1:15632890-15632909 | None:intergenic | 40.0% | |
| !!! | GAGACTTTTTTCCCAATCTG+AGG | - | chr6_1:15632905-15632924 | Msa0876960:intron | 40.0% |
| TTAGTCTAGCCACATGATGT+GGG | + | chr6_1:15632954-15632973 | None:intergenic | 40.0% | |
| TTTAGTCTAGCCACATGATG+TGG | + | chr6_1:15632955-15632974 | None:intergenic | 40.0% | |
| TTCATGCAAGACGATGGTAT+TGG | + | chr6_1:15633019-15633038 | None:intergenic | 40.0% | |
| AATACCATCGTCTTGCATGA+AGG | - | chr6_1:15633018-15633037 | Msa0876960:intron | 40.0% | |
| ATACCATCGTCTTGCATGAA+GGG | - | chr6_1:15633019-15633038 | Msa0876960:intron | 40.0% | |
| GGAGAATCACAAGATTGATG+AGG | - | chr6_1:15633043-15633062 | Msa0876960:intron | 40.0% | |
| GTTCAAAGACCTCATGTCTA+AGG | - | chr6_1:15631625-15631644 | Msa0876960:intron | 40.0% | |
| TCAAAGACCTCATGTCTAAG+GGG | - | chr6_1:15631627-15631646 | Msa0876960:intron | 40.0% | |
| !!! | ACTGGTTTTTGGATGATCAG+CGG | - | chr6_1:15633625-15633644 | Msa0876960:intron | 40.0% |
| !! | ATGGTTCTGAATTGAGCTAC+AGG | - | chr6_1:15633703-15633722 | Msa0876960:intron | 40.0% |
| !! | TGGTTCTGAATTGAGCTACA+GGG | - | chr6_1:15633704-15633723 | Msa0876960:intron | 40.0% |
| GTAAGCTTCATGAGGAAGAT+TGG | - | chr6_1:15633934-15633953 | Msa0876960:intron | 40.0% | |
| TTGGCCCAAATTGCTTAAAC+AGG | - | chr6_1:15633953-15633972 | Msa0876960:intron | 40.0% | |
| !!! | TTTTGTAGTGTTGGTTGCTG+AGG | + | chr6_1:15634020-15634039 | None:intergenic | 40.0% |
| TCAGCAACCAACACTACAAA+AGG | - | chr6_1:15634019-15634038 | Msa0876960:intron | 40.0% | |
| ! | TCCAATGTCTTGTTACGGAA+AGG | - | chr6_1:15634122-15634141 | Msa0876960:intron | 40.0% |
| ACCTTTCCGTAACAAGACAT+TGG | + | chr6_1:15634126-15634145 | None:intergenic | 40.0% | |
| ! | CTTGTTACGGAAAGGTTTTG+AGG | - | chr6_1:15634130-15634149 | Msa0876960:intron | 40.0% |
| !!! | CGAAGGTAGCTAGTTTTGAT+AGG | - | chr6_1:15634303-15634322 | Msa0876960:intron | 40.0% |
| GTTTGGTAAAAAGAAGTCGG+AGG | - | chr6_1:15634325-15634344 | Msa0876960:intron | 40.0% | |
| AGAGGGAGAAAGAAGAAAGA+TGG | - | chr6_1:15634379-15634398 | Msa0876960:intron | 40.0% | |
| GAGGGAGAAAGAAGAAAGAT+GGG | - | chr6_1:15634380-15634399 | Msa0876960:intron | 40.0% | |
| AGGGAGAAAGAAGAAAGATG+GGG | - | chr6_1:15634381-15634400 | Msa0876960:intron | 40.0% | |
| AAGAAAGATGGGGGATGTTA+AGG | - | chr6_1:15634391-15634410 | Msa0876960:intron | 40.0% | |
| GAGTGAGGGAGAAAAAAGTA+AGG | - | chr6_1:15634415-15634434 | Msa0876960:intron | 40.0% | |
| TGAGGGAGAAAAAAGTAAGG+TGG | - | chr6_1:15634418-15634437 | Msa0876960:intron | 40.0% | |
| !! | TTATTTGGGCTTTGAAGGTG+CGG | - | chr6_1:15634561-15634580 | Msa0876960:CDS | 40.0% |
| !! | CAAGCTTGCTATTATTCCGT+TGG | - | chr6_1:15634651-15634670 | Msa0876960:intron | 40.0% |
| AAAACCTTGTTAGCACCCAA+CGG | + | chr6_1:15634670-15634689 | None:intergenic | 40.0% | |
| ! | GTGCTAACAAGGTTTTTCTG+CGG | - | chr6_1:15634674-15634693 | Msa0876960:intron | 40.0% |
| GTATCCTTATTCCATGACAC+AGG | + | chr6_1:15634772-15634791 | None:intergenic | 40.0% | |
| TCTATATTCCAAGCGTGAAG+TGG | + | chr6_1:15634838-15634857 | None:intergenic | 40.0% | |
| ! | TTGATGTTGGCTGTCTATTG+AGG | - | chr6_1:15634878-15634897 | Msa0876960:intron | 40.0% |
| ! | TGATGTTGGCTGTCTATTGA+GGG | - | chr6_1:15634879-15634898 | Msa0876960:intron | 40.0% |
| !! | ATTGAGGGTTGATGATAGCA+CGG | - | chr6_1:15634894-15634913 | Msa0876960:intron | 40.0% |
| !!! | GAGATCGTTTTGATTATGCG+AGG | - | chr6_1:15634923-15634942 | Msa0876960:intron | 40.0% |
| !! | TTTTGATTATGCGAGGGTGT+TGG | - | chr6_1:15634930-15634949 | Msa0876960:intron | 40.0% |
| ! | GTTGGTTTCGACAACATCTT+TGG | - | chr6_1:15634948-15634967 | Msa0876960:intron | 40.0% |
| TATTATTCATACTCGGGCTC+AGG | - | chr6_1:15634972-15634991 | Msa0876960:intron | 40.0% | |
| AAACCTTCAGCATGTTCTTC+AGG | + | chr6_1:15635117-15635136 | None:intergenic | 40.0% | |
| ! | GAAGAACATGCTGAAGGTTT+TGG | - | chr6_1:15635117-15635136 | Msa0876960:CDS | 40.0% |
| !!! | AACATGCTGAAGGTTTTGGA+AGG | - | chr6_1:15635121-15635140 | Msa0876960:CDS | 40.0% |
| !!! | ACATGCTGAAGGTTTTGGAA+GGG | - | chr6_1:15635122-15635141 | Msa0876960:CDS | 40.0% |
| GTTGTTGGATCAGTAAGCAA+TGG | - | chr6_1:15635303-15635322 | Msa0876960:exon | 40.0% | |
| ! | TTTTGTACAAGCATGCCACC+AGG | + | chr6_1:15628708-15628727 | None:intergenic | 45.0% |
| ! | ACTCCAGTTTTGCTACCGTA+CGG | - | chr6_1:15629050-15629069 | Msa0876960:intron | 45.0% |
| ! | AGTTAGAGGGTTGATCTGCA+TGG | - | chr6_1:15629107-15629126 | Msa0876960:intron | 45.0% |
| ! | TGGTGTTAGGGACAAAGACA+AGG | - | chr6_1:15629391-15629410 | Msa0876960:intron | 45.0% |
| !! | AAGCTACTTGGTTTGGCAAG+AGG | - | chr6_1:15629449-15629468 | Msa0876960:intron | 45.0% |
| GGTGCAACACCATGTTATGT+TGG | - | chr6_1:15629795-15629814 | Msa0876960:intron | 45.0% | |
| TAATCATTGGTGTGCACGCA+TGG | + | chr6_1:15629933-15629952 | None:intergenic | 45.0% | |
| ! | GCTACCACAATTTTTGCGAG+GGG | - | chr6_1:15630086-15630105 | Msa0876960:intron | 45.0% |
| ! | CTACCACAATTTTTGCGAGG+GGG | - | chr6_1:15630087-15630106 | Msa0876960:intron | 45.0% |
| CGAATGGATGTGTAGTCATG+GGG | + | chr6_1:15630463-15630482 | None:intergenic | 45.0% | |
| GCGAATGGATGTGTAGTCAT+GGG | + | chr6_1:15630464-15630483 | None:intergenic | 45.0% | |
| TGGACTCAGTATTTGGATGC+TGG | - | chr6_1:15630538-15630557 | Msa0876960:intron | 45.0% | |
| !! | ACTCACGCTGGGGTTATTTT+TGG | + | chr6_1:15631070-15631089 | None:intergenic | 45.0% |
| AACGTGAGTTAACTCACGCT+GGG | + | chr6_1:15631081-15631100 | None:intergenic | 45.0% | |
| ! | GGTGGTGTTAGCCTAAAAAC+AGG | + | chr6_1:15631114-15631133 | None:intergenic | 45.0% |
| ! | TGTTTGAAGTGTGGAGTTGG+TGG | + | chr6_1:15631132-15631151 | None:intergenic | 45.0% |
| ! | GTGTGTTTGAAGTGTGGAGT+TGG | + | chr6_1:15631135-15631154 | None:intergenic | 45.0% |
| !! | CACACATTTGGGTGTTTTGG+AGG | + | chr6_1:15631177-15631196 | None:intergenic | 45.0% |
| CACCTTCTCACAAATAGTGG+TGG | - | chr6_1:15631309-15631328 | Msa0876960:intron | 45.0% | |
| GCAACAATGTGACACATGTC+CGG | + | chr6_1:15631365-15631384 | None:intergenic | 45.0% | |
| !!! | GAGACTTTTTTCCCAATCCG+AGG | - | chr6_1:15631425-15631444 | Msa0876960:intron | 45.0% |
| ATGTGGGCATGTAGGTTAAG+TGG | + | chr6_1:15631458-15631477 | None:intergenic | 45.0% | |
| TCCTCTTGAAAGCGGAGTAT+CGG | + | chr6_1:15632119-15632138 | None:intergenic | 45.0% | |
| CAACTCATTCAACTTGTCGG+TGG | + | chr6_1:15632163-15632182 | None:intergenic | 45.0% | |
| ATGCTCACGCATTGTAAGTG+AGG | - | chr6_1:15632320-15632339 | Msa0876960:intron | 45.0% | |
| ! | GCTGGTGTTAGCCTAAAAAC+AGG | + | chr6_1:15632564-15632583 | None:intergenic | 45.0% |
| ! | TGTTTGAAGTGTGGAACTGC+TGG | + | chr6_1:15632582-15632601 | None:intergenic | 45.0% |
| !! | CACACTTTTGGGTGTTTTGG+AGG | + | chr6_1:15632625-15632644 | None:intergenic | 45.0% |
| ! | CACACACACACACACACTTT+TGG | + | chr6_1:15632637-15632656 | None:intergenic | 45.0% |
| GCAAATCAATGGAAAACGCC+AGG | - | chr6_1:15632692-15632711 | Msa0876960:intron | 45.0% | |
| ATGTGGGCATGTAGGTTAAG+TGG | + | chr6_1:15631458-15631477 | None:intergenic | 45.0% | |
| TACCATCGTCTTGCATGAAG+GGG | - | chr6_1:15633020-15633039 | Msa0876960:intron | 45.0% | |
| ! | GTTGGTTATTTCGGCGGTTT+CGG | + | chr6_1:15633134-15633153 | None:intergenic | 45.0% |
| !!! | CCTTTTGGTTTTTCGGGAGT+GGG | + | chr6_1:15633187-15633206 | None:intergenic | 45.0% |
| !!! | TCCTTTTGGTTTTTCGGGAG+TGG | + | chr6_1:15633188-15633207 | None:intergenic | 45.0% |
| ! | TCTAGGGTTAGGGTTAGGTA+TGG | - | chr6_1:15633684-15633703 | Msa0876960:intron | 45.0% |
| CAGGGAGACTGACAATGAAA+AGG | - | chr6_1:15633722-15633741 | Msa0876960:intron | 45.0% | |
| TGTTTGTATGTTGAGCGACC+TGG | + | chr6_1:15633804-15633823 | None:intergenic | 45.0% | |
| TGGCAATGAAAATCCTTGGC+AGG | - | chr6_1:15633833-15633852 | Msa0876960:intron | 45.0% | |
| GGCAATGAAAATCCTTGGCA+GGG | - | chr6_1:15633834-15633853 | Msa0876960:intron | 45.0% | |
| GCAATGAAAATCCTTGGCAG+GGG | - | chr6_1:15633835-15633854 | Msa0876960:intron | 45.0% | |
| TGATGCACGTAAGCTTCATG+AGG | - | chr6_1:15633926-15633945 | Msa0876960:intron | 45.0% | |
| AAGGTTCAAGCCTACAACCT+TGG | - | chr6_1:15633981-15634000 | Msa0876960:intron | 45.0% | |
| GCAACCAACACTACAAAAGG+AGG | - | chr6_1:15634022-15634041 | Msa0876960:intron | 45.0% | |
| ! | ACGTCCTCCTTTTGTAGTGT+TGG | + | chr6_1:15634029-15634048 | None:intergenic | 45.0% |
| !!! | CGGAAAGGTTTTGAGGTTTG+TGG | - | chr6_1:15634137-15634156 | Msa0876960:intron | 45.0% |
| TGAGGTTTGTGGTCAAATGG+AGG | - | chr6_1:15634148-15634167 | Msa0876960:intron | 45.0% | |
| GCTCGTAAGCGTAATGTCAA+TGG | - | chr6_1:15634182-15634201 | Msa0876960:intron | 45.0% | |
| CGTAAGCGTAATGTCAATGG+CGG | - | chr6_1:15634185-15634204 | Msa0876960:intron | 45.0% | |
| GTAAGCGTAATGTCAATGGC+GGG | - | chr6_1:15634186-15634205 | Msa0876960:intron | 45.0% | |
| ! | TGTGTGGTTTGGGGATTGTA+AGG | - | chr6_1:15634274-15634293 | Msa0876960:intron | 45.0% |
| TGGTAAAAAGAAGTCGGAGG+TGG | - | chr6_1:15634328-15634347 | Msa0876960:intron | 45.0% | |
| GGGAGAAAGAAGAAAGATGG+GGG | - | chr6_1:15634382-15634401 | Msa0876960:intron | 45.0% | |
| ! | AGCGAGGACGTAACACTTTT+GGG | - | chr6_1:15634464-15634483 | Msa0876960:intron | 45.0% |
| !! | AGGACGTAACACTTTTGGGT+GGG | - | chr6_1:15634468-15634487 | Msa0876960:intron | 45.0% |
| TGGGAAGGAAGGTAGTGTTA+AGG | - | chr6_1:15634487-15634506 | Msa0876960:CDS | 45.0% | |
| TATTCCGTTGGGTGCTAACA+AGG | - | chr6_1:15634663-15634682 | Msa0876960:intron | 45.0% | |
| TTTCTGCGGTCTCTTGATGA+TGG | - | chr6_1:15634688-15634707 | Msa0876960:intron | 45.0% | |
| ! | TTCTGCGGTCTCTTGATGAT+GGG | - | chr6_1:15634689-15634708 | Msa0876960:intron | 45.0% |
| ! | TCTTTTCCAAGCCTGTGTCA+TGG | - | chr6_1:15634758-15634777 | Msa0876960:intron | 45.0% |
| CTTATTCCATGACACAGGCT+TGG | + | chr6_1:15634767-15634786 | None:intergenic | 45.0% | |
| CAAGCCTGTGTCATGGAATA+AGG | - | chr6_1:15634765-15634784 | Msa0876960:intron | 45.0% | |
| ! | GATACGTTGATTGGAGAACG+AGG | - | chr6_1:15634787-15634806 | Msa0876960:intron | 45.0% |
| !! | GGTGCGTGGGTTAGAATTTA+TGG | - | chr6_1:15634808-15634827 | Msa0876960:intron | 45.0% |
| TTGCCTGAAGAACATGCTGA+AGG | - | chr6_1:15635111-15635130 | Msa0876960:CDS | 45.0% | |
| !!! | GGACGATGCTACTTTTTGCA+AGG | - | chr6_1:15635233-15635252 | Msa0876960:CDS | 45.0% |
| TGATCCAACAACATGCACGT+TGG | + | chr6_1:15635295-15635314 | None:intergenic | 45.0% | |
| AGTAAGCAATGGTTCTCCCT+CGG | - | chr6_1:15635314-15635333 | Msa0876960:five_prime_UTR | 45.0% | |
| !! | CAAAAATATAAATATAAATA+TGG | + | chr6_1:15629154-15629173 | None:intergenic | 5.0% |
| !! | TATATTTAAAAATTTATAGA+GGG | + | chr6_1:15630806-15630825 | None:intergenic | 5.0% |
| !! | ATATATTTAAAAATTTATAG+AGG | + | chr6_1:15630807-15630826 | None:intergenic | 5.0% |
| ATCGAATGGGAACTTAGGCC+TGG | - | chr6_1:15628687-15628706 | Msa0876960:CDS | 50.0% | |
| ! | GTTTAGAGCCAAGAGAGCAG+AGG | - | chr6_1:15629318-15629337 | Msa0876960:intron | 50.0% |
| TAGAGAAGCCTCTGCTCTCT+TGG | + | chr6_1:15629329-15629348 | None:intergenic | 50.0% | |
| GAGCAGAGGCTTCTCTACAA+AGG | - | chr6_1:15629332-15629351 | Msa0876960:intron | 50.0% | |
| GTACGCATGCAGCTCTTACT+TGG | - | chr6_1:15630050-15630069 | Msa0876960:intron | 50.0% | |
| CAGCTCTTACTTGGAAGCAG+CGG | - | chr6_1:15630059-15630078 | Msa0876960:intron | 50.0% | |
| GTGTAGTCATGGGGTAGCAT+TGG | + | chr6_1:15630454-15630473 | None:intergenic | 50.0% | |
| GGCGAATGGATGTGTAGTCA+TGG | + | chr6_1:15630465-15630484 | None:intergenic | 50.0% | |
| GATTGGACCACTTAGCCCTA+AGG | + | chr6_1:15630925-15630944 | None:intergenic | 50.0% | |
| ACGTGAGTTAACTCACGCTG+GGG | + | chr6_1:15631080-15631099 | None:intergenic | 50.0% | |
| CAACGTGAGTTAACTCACGC+TGG | + | chr6_1:15631082-15631101 | None:intergenic | 50.0% | |
| !!! | GGGTGTTTTGGAGGTGAAGA+GGG | + | chr6_1:15631168-15631187 | None:intergenic | 50.0% |
| !!! | TGGGTGTTTTGGAGGTGAAG+AGG | + | chr6_1:15631169-15631188 | None:intergenic | 50.0% |
| GGTTAAGTGGTGTAGCACCT+CGG | + | chr6_1:15631445-15631464 | None:intergenic | 50.0% | |
| ACCTACATGCCCACATCATG+TGG | - | chr6_1:15631462-15631481 | Msa0876960:intron | 50.0% | |
| TCCACATGATGTGGGCATGT+AGG | + | chr6_1:15631466-15631485 | None:intergenic | 50.0% | |
| CATGCCCACATCATGTGGAT+AGG | - | chr6_1:15631467-15631486 | Msa0876960:intron | 50.0% | |
| TCCCACTCCCGAAAAACCAA+AGG | - | chr6_1:15631702-15631721 | Msa0876960:intron | 50.0% | |
| !!! | CCCTTTGGTTTTTCGGGAGT+GGG | + | chr6_1:15631706-15631725 | None:intergenic | 50.0% |
| CCCACTCCCGAAAAACCAAA+GGG | - | chr6_1:15631703-15631722 | Msa0876960:intron | 50.0% | |
| !!! | TCCCTTTGGTTTTTCGGGAG+TGG | + | chr6_1:15631707-15631726 | None:intergenic | 50.0% |
| TCCGATACTCCGCTTTCAAG+AGG | - | chr6_1:15632115-15632134 | Msa0876960:intron | 50.0% | |
| CTCATTCAACTTGTCGGTGG+AGG | + | chr6_1:15632160-15632179 | None:intergenic | 50.0% | |
| !!! | GGGTGTTTTGGAGGTGAAGA+GGG | + | chr6_1:15631168-15631187 | None:intergenic | 50.0% |
| !!! | TGGGTGTTTTGGAGGTGAAG+AGG | + | chr6_1:15631169-15631188 | None:intergenic | 50.0% |
| CAGCTGATAAGTCCCGAAAG+AGG | - | chr6_1:15632875-15632894 | Msa0876960:intron | 50.0% | |
| TGGGCATGTAGGTTAAGTGG+TGG | + | chr6_1:15631455-15631474 | None:intergenic | 50.0% | |
| ACCTACATGCCCACATCATG+TGG | - | chr6_1:15631462-15631481 | Msa0876960:intron | 50.0% | |
| ACCATCGTCTTGCATGAAGG+GGG | - | chr6_1:15633021-15633040 | Msa0876960:intron | 50.0% | |
| CCCACTCCCGAAAAACCAAA+AGG | - | chr6_1:15631703-15631722 | Msa0876960:intron | 50.0% | |
| !! | CAAGCAGGGTGCCACTATAT+GGG | - | chr6_1:15633529-15633548 | Msa0876960:intron | 50.0% |
| !! | AAGCAGGGTGCCACTATATG+GGG | - | chr6_1:15633530-15633549 | Msa0876960:intron | 50.0% |
| TGCCACTATATGGGGGGATT+AGG | - | chr6_1:15633538-15633557 | Msa0876960:intron | 50.0% | |
| GCCACTATATGGGGGGATTA+GGG | - | chr6_1:15633539-15633558 | Msa0876960:intron | 50.0% | |
| CCACTATATGGGGGGATTAG+GGG | - | chr6_1:15633540-15633559 | Msa0876960:intron | 50.0% | |
| CACTATATGGGGGGATTAGG+GGG | - | chr6_1:15633541-15633560 | Msa0876960:intron | 50.0% | |
| ACTATATGGGGGGATTAGGG+GGG | - | chr6_1:15633542-15633561 | Msa0876960:intron | 50.0% | |
| ! | AAAGCGTCTGAACAGGTGGA+TGG | - | chr6_1:15633594-15633613 | Msa0876960:intron | 50.0% |
| ! | TTTTTGGATGATCAGCGGCG+CGG | - | chr6_1:15633630-15633649 | Msa0876960:intron | 50.0% |
| GATTCAGAGGTCTCGAGAGA+TGG | - | chr6_1:15633753-15633772 | Msa0876960:intron | 50.0% | |
| ATTCTGCAGTACACACGTCC+AGG | - | chr6_1:15633783-15633802 | Msa0876960:intron | 50.0% | |
| ATGAAAATCCTTGGCAGGGG+TGG | - | chr6_1:15633838-15633857 | Msa0876960:intron | 50.0% | |
| TGAAAATCCTTGGCAGGGGT+GGG | - | chr6_1:15633839-15633858 | Msa0876960:intron | 50.0% | |
| ! | TGCTGCTTCACCAAGGTTGT+AGG | + | chr6_1:15633994-15634013 | None:intergenic | 50.0% |
| GGAGGACGTCATCATAGAAC+AGG | - | chr6_1:15634040-15634059 | Msa0876960:intron | 50.0% | |
| GACGTCATCATAGAACAGGC+TGG | - | chr6_1:15634044-15634063 | Msa0876960:intron | 50.0% | |
| !! | AATGTCAATGGCGGGCTGTT+TGG | - | chr6_1:15634194-15634213 | Msa0876960:intron | 50.0% |
| ! | GTGGTTTGGGGATTGTAAGG+TGG | - | chr6_1:15634277-15634296 | Msa0876960:intron | 50.0% |
| GTTTGGGGATTGTAAGGTGG+TGG | - | chr6_1:15634280-15634299 | Msa0876960:intron | 50.0% | |
| AGAAGTCGGAGGTGGTTTCT+AGG | - | chr6_1:15634336-15634355 | Msa0876960:intron | 50.0% | |
| GAAGTCGGAGGTGGTTTCTA+GGG | - | chr6_1:15634337-15634356 | Msa0876960:intron | 50.0% | |
| !! | GAGGTGGTTTCTAGGGTTGA+GGG | - | chr6_1:15634344-15634363 | Msa0876960:intron | 50.0% |
| GGGGATGTTAAGGTGAGTGA+GGG | - | chr6_1:15634401-15634420 | Msa0876960:intron | 50.0% | |
| GTAGTGCCTCTAGTACGCAA+GGG | - | chr6_1:15634440-15634459 | Msa0876960:intron | 50.0% | |
| TAGTGCCTCTAGTACGCAAG+GGG | - | chr6_1:15634441-15634460 | Msa0876960:intron | 50.0% | |
| ! | GAGCGAGGACGTAACACTTT+TGG | - | chr6_1:15634463-15634482 | Msa0876960:intron | 50.0% |
| ! | GAGGACGTAACACTTTTGGG+TGG | - | chr6_1:15634467-15634486 | Msa0876960:intron | 50.0% |
| !! | CGTAACACTTTTGGGTGGGA+AGG | - | chr6_1:15634472-15634491 | Msa0876960:CDS | 50.0% |
| !! | ACACTTTTGGGTGGGAAGGA+AGG | - | chr6_1:15634476-15634495 | Msa0876960:CDS | 50.0% |
| !! | GCGGTGGTGTCTGTTTTGAA+CGG | - | chr6_1:15634580-15634599 | Msa0876960:CDS | 50.0% |
| !! | TCTGCGGTCTCTTGATGATG+GGG | - | chr6_1:15634690-15634709 | Msa0876960:intron | 50.0% |
| ATGGTGTACCACTTCACGCT+TGG | - | chr6_1:15634827-15634846 | Msa0876960:intron | 50.0% | |
| !! | CGGGCTCAGGTTTTGATAGA+TGG | - | chr6_1:15634985-15635004 | Msa0876960:intron | 50.0% |
| GGATGATGCCACTAGTTGCA+AGG | - | chr6_1:15635263-15635282 | Msa0876960:CDS | 50.0% | |
| GGTAGCTTCCTTGCAACTAG+TGG | + | chr6_1:15635274-15635293 | None:intergenic | 50.0% | |
| GCTACCAACGTGCATGTTGT+TGG | - | chr6_1:15635288-15635307 | Msa0876960:exon | 50.0% | |
| ! | TGTTGTACAGCTGGTACCGA+GGG | + | chr6_1:15635333-15635352 | None:intergenic | 50.0% |
| TTGTTGTACAGCTGGTACCG+AGG | + | chr6_1:15635334-15635353 | None:intergenic | 50.0% | |
| GAATGGGAACTTAGGCCTGG+TGG | - | chr6_1:15628690-15628709 | Msa0876960:CDS | 55.0% | |
| ! | CCAGTTTTGCTACCGTACGG+CGG | - | chr6_1:15629053-15629072 | Msa0876960:intron | 55.0% |
| TGGCCCCCTCGCAAAAATTG+TGG | + | chr6_1:15630093-15630112 | None:intergenic | 55.0% | |
| CACATCCATTCGCCCTTGCT+TGG | - | chr6_1:15630471-15630490 | Msa0876960:intron | 55.0% | |
| TGCTTCCAAGCAAGGGCGAA+TGG | + | chr6_1:15630479-15630498 | None:intergenic | 55.0% | |
| GTGGTGTAGCACCTCGGATT+GGG | + | chr6_1:15631439-15631458 | None:intergenic | 55.0% | |
| AGTGGTGTAGCACCTCGGAT+TGG | + | chr6_1:15631440-15631459 | None:intergenic | 55.0% | |
| GTTTCGGCCCCTTAGACATG+AGG | + | chr6_1:15631637-15631656 | None:intergenic | 55.0% | |
| ! | GTGGTGGAGCACCTCAGATT+GGG | + | chr6_1:15632919-15632938 | None:intergenic | 55.0% |
| ! | AGTGGTGGAGCACCTCAGAT+TGG | + | chr6_1:15632920-15632939 | None:intergenic | 55.0% |
| GCCACATGATGTGGGCATGT+AGG | + | chr6_1:15632946-15632965 | None:intergenic | 55.0% | |
| CCATCGTCTTGCATGAAGGG+GGG | - | chr6_1:15633022-15633041 | Msa0876960:intron | 55.0% | |
| GTTTCGGCCCCTTAGACATG+AGG | + | chr6_1:15631637-15631656 | None:intergenic | 55.0% | |
| ACATGAGTGAGAGGAGAGCG+TGG | - | chr6_1:15633404-15633423 | Msa0876960:intron | 55.0% | |
| TGGTCCAGAGAGAGAGTGAG+AGG | - | chr6_1:15633424-15633443 | Msa0876960:intron | 55.0% | |
| TCCAGAGAGAGAGTGAGAGG+CGG | - | chr6_1:15633427-15633446 | Msa0876960:intron | 55.0% | |
| GAGTGAGAGGCGGTTACCAT+CGG | - | chr6_1:15633437-15633456 | Msa0876960:intron | 55.0% | |
| ! | CCTCCGGTGATGGTGAATAC+CGG | + | chr6_1:15633483-15633502 | None:intergenic | 55.0% |
| ! | CGAGGTACTATGGGGGGAAT+GGG | - | chr6_1:15633503-15633522 | Msa0876960:intron | 55.0% |
| ! | GAGGTACTATGGGGGGAATG+GGG | - | chr6_1:15633504-15633523 | Msa0876960:intron | 55.0% |
| CCATATAGTGGCACCCTGCT+TGG | + | chr6_1:15633531-15633550 | None:intergenic | 55.0% | |
| !! | CCAAGCAGGGTGCCACTATA+TGG | - | chr6_1:15633528-15633547 | Msa0876960:intron | 55.0% |
| !! | AGCAGGGTGCCACTATATGG+GGG | - | chr6_1:15633531-15633550 | Msa0876960:intron | 55.0% |
| CCCCTAATCCCCCCATATAG+TGG | + | chr6_1:15633543-15633562 | None:intergenic | 55.0% | |
| !! | AAGGGGGAAAGCGTCTGAAC+AGG | - | chr6_1:15633587-15633606 | Msa0876960:intron | 55.0% |
| CTGAACAGGTGGATGGACAG+CGG | - | chr6_1:15633601-15633620 | Msa0876960:intron | 55.0% | |
| TGAACAGGTGGATGGACAGC+GGG | - | chr6_1:15633602-15633621 | Msa0876960:intron | 55.0% | |
| !!! | TGGACAGCGGGACTGGTTTT+TGG | - | chr6_1:15633614-15633633 | Msa0876960:intron | 55.0% |
| ! | GACGGTCTAGGGTTAGGGTT+AGG | - | chr6_1:15633679-15633698 | Msa0876960:intron | 55.0% |
| GAAAATCCTTGGCAGGGGTG+GGG | - | chr6_1:15633840-15633859 | Msa0876960:intron | 55.0% | |
| ! | GGATTGTAAGGTGGTGGCGA+AGG | - | chr6_1:15634286-15634305 | Msa0876960:intron | 55.0% |
| !! | GGAGGTGGTTTCTAGGGTTG+AGG | - | chr6_1:15634343-15634362 | Msa0876960:intron | 55.0% |
| GGGGGATGTTAAGGTGAGTG+AGG | - | chr6_1:15634400-15634419 | Msa0876960:intron | 55.0% | |
| GGTAGTGCCTCTAGTACGCA+AGG | - | chr6_1:15634439-15634458 | Msa0876960:intron | 55.0% | |
| !! | TTTGGGCTTTGAAGGTGCGG+TGG | - | chr6_1:15634564-15634583 | Msa0876960:CDS | 55.0% |
| TGATTGGAGAACGAGGTGCG+TGG | - | chr6_1:15634794-15634813 | Msa0876960:intron | 55.0% | |
| GATTGGAGAACGAGGTGCGT+GGG | - | chr6_1:15634795-15634814 | Msa0876960:intron | 55.0% | |
| !! | GAGGGTTGATGATAGCACGG+TGG | - | chr6_1:15634897-15634916 | Msa0876960:intron | 55.0% |
| CCGCCGTACGGTAGCAAAAC+TGG | + | chr6_1:15629056-15629075 | None:intergenic | 60.0% | |
| CCCCCCTTCATGCAAGACGA+TGG | + | chr6_1:15633025-15633044 | None:intergenic | 60.0% | |
| ACCGCCTCTCACTCTCTCTC+TGG | + | chr6_1:15633431-15633450 | None:intergenic | 60.0% | |
| !! | GGTTACCATCGGTTCCACCG+TGG | - | chr6_1:15633448-15633467 | Msa0876960:intron | 60.0% |
| GTTGTCCACGGTGGAACCGA+TGG | + | chr6_1:15633456-15633475 | None:intergenic | 60.0% | |
| AATACCGGCGCGGTTGTCCA+CGG | + | chr6_1:15633468-15633487 | None:intergenic | 60.0% | |
| ! | GGTGATGGTGAATACCGGCG+CGG | + | chr6_1:15633478-15633497 | None:intergenic | 60.0% |
| ! | GCGCCGGTATTCACCATCAC+CGG | - | chr6_1:15633477-15633496 | Msa0876960:intron | 60.0% |
| CCGGTATTCACCATCACCGG+AGG | - | chr6_1:15633480-15633499 | Msa0876960:intron | 60.0% | |
| ATTCACCATCACCGGAGGCG+AGG | - | chr6_1:15633485-15633504 | Msa0876960:intron | 60.0% | |
| TAGTACCTCGCCTCCGGTGA+TGG | + | chr6_1:15633493-15633512 | None:intergenic | 60.0% | |
| ! | TCACCGGAGGCGAGGTACTA+TGG | - | chr6_1:15633493-15633512 | Msa0876960:intron | 60.0% |
| ! | CACCGGAGGCGAGGTACTAT+GGG | - | chr6_1:15633494-15633513 | Msa0876960:intron | 60.0% |
| ! | ACCGGAGGCGAGGTACTATG+GGG | - | chr6_1:15633495-15633514 | Msa0876960:intron | 60.0% |
| ! | GCGAGGTACTATGGGGGGAA+TGG | - | chr6_1:15633502-15633521 | Msa0876960:intron | 60.0% |
| !! | GCAGGGTGCCACTATATGGG+GGG | - | chr6_1:15633532-15633551 | Msa0876960:intron | 60.0% |
| ATATGGGGGGATTAGGGGGG+AGG | - | chr6_1:15633545-15633564 | Msa0876960:intron | 60.0% | |
| !! | GGGGAAAGCGTCTGAACAGG+TGG | - | chr6_1:15633590-15633609 | Msa0876960:intron | 60.0% |
| AGCATCAGCGAGGACGGTCT+AGG | - | chr6_1:15633667-15633686 | Msa0876960:intron | 60.0% | |
| GCATCAGCGAGGACGGTCTA+GGG | - | chr6_1:15633668-15633687 | Msa0876960:intron | 60.0% | |
| ! | AGCGAGGACGGTCTAGGGTT+AGG | - | chr6_1:15633673-15633692 | Msa0876960:intron | 60.0% |
| ! | GCGAGGACGGTCTAGGGTTA+GGG | - | chr6_1:15633674-15633693 | Msa0876960:intron | 60.0% |
| CAGGGGTGGGGTTCACGTAA+TGG | - | chr6_1:15633852-15633871 | Msa0876960:intron | 60.0% | |
| !! | GAGGACGTGCTGCTTCACCA+AGG | + | chr6_1:15634001-15634020 | None:intergenic | 60.0% |
| TCGCTCCCCTTGCGTACTAG+AGG | + | chr6_1:15634449-15634468 | None:intergenic | 60.0% | |
| TCTAGTACGCAAGGGGAGCG+AGG | - | chr6_1:15634448-15634467 | Msa0876960:intron | 60.0% | |
| GGGTCGGCCTTAGGGCTAAG+TGG | - | chr6_1:15630915-15630934 | Msa0876960:intron | 65.0% | |
| CCCCCATAGTACCTCGCCTC+CGG | + | chr6_1:15633499-15633518 | None:intergenic | 65.0% | |
| ! | CCGGAGGCGAGGTACTATGG+GGG | - | chr6_1:15633496-15633515 | Msa0876960:intron | 65.0% |
| ! | CGGAGGCGAGGTACTATGGG+GGG | - | chr6_1:15633497-15633516 | Msa0876960:intron | 65.0% |
| GGGGGAATGGGGTCCAAGCA+GGG | - | chr6_1:15633515-15633534 | Msa0876960:intron | 65.0% | |
| TGCCTGGTGCGAGACTGCGA+AGG | - | chr6_1:15633568-15633587 | Msa0876960:intron | 65.0% | |
| GCCTGGTGCGAGACTGCGAA+GGG | - | chr6_1:15633569-15633588 | Msa0876960:intron | 65.0% | |
| CCTGGTGCGAGACTGCGAAG+GGG | - | chr6_1:15633570-15633589 | Msa0876960:intron | 65.0% | |
| CTGGTGCGAGACTGCGAAGG+GGG | - | chr6_1:15633571-15633590 | Msa0876960:intron | 65.0% | |
| AGGTGGATGGACAGCGGGAC+TGG | - | chr6_1:15633607-15633626 | Msa0876960:intron | 65.0% | |
| TTGGATGATCAGCGGCGCGG+AGG | - | chr6_1:15633633-15633652 | Msa0876960:intron | 65.0% | |
| !! | GCATGGGAGGAGCATCAGCG+AGG | - | chr6_1:15633657-15633676 | Msa0876960:intron | 65.0% |
| !! | GGGAGGAGCATCAGCGAGGA+CGG | - | chr6_1:15633661-15633680 | Msa0876960:intron | 65.0% |
| TCCACCGTGGACAACCGCGC+CGG | - | chr6_1:15633461-15633480 | Msa0876960:intron | 70.0% | |
| GGGGGGAATGGGGTCCAAGC+AGG | - | chr6_1:15633514-15633533 | Msa0876960:intron | 70.0% | |
| !! | GGGATTAGGGGGGAGGTGCC+TGG | - | chr6_1:15633552-15633571 | Msa0876960:intron | 70.0% |
| CCCCTTCGCAGTCTCGCACC+AGG | + | chr6_1:15633573-15633592 | None:intergenic | 70.0% | |
| ATCAGCGGCGCGGAGGAGCA+TGG | - | chr6_1:15633640-15633659 | Msa0876960:intron | 70.0% | |
| ! | TCAGCGGCGCGGAGGAGCAT+GGG | - | chr6_1:15633641-15633660 | Msa0876960:intron | 70.0% |
| CGTGAACCCCACCCCTGCCA+AGG | + | chr6_1:15633849-15633868 | None:intergenic | 70.0% | |
| ACCGGCGCGGTTGTCCACGG+TGG | + | chr6_1:15633465-15633484 | None:intergenic | 75.0% | |
| !! | GCGGCGCGGAGGAGCATGGG+AGG | - | chr6_1:15633644-15633663 | Msa0876960:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 15628531 | 15635353 | 15628531 | ID=Msa0876960;Name=Msa0876960 |
| chr6_1 | mRNA | 15628531 | 15635353 | 15628531 | ID=Msa0876960-mRNA-1;Parent=Msa0876960;Name=Msa0876960-mRNA-1;_AED=0.47;_eAED=0.47;_QI=48|0.33|0.25|0.5|1|0.75|4|0|229 |
| chr6_1 | exon | 15628531 | 15628713 | 15628531 | ID=Msa0876960-mRNA-1:exon:4484;Parent=Msa0876960-mRNA-1 |
| chr6_1 | exon | 15629901 | 15630029 | 15629901 | ID=Msa0876960-mRNA-1:exon:4483;Parent=Msa0876960-mRNA-1 |
| chr6_1 | exon | 15634472 | 15634599 | 15634472 | ID=Msa0876960-mRNA-1:exon:4482;Parent=Msa0876960-mRNA-1 |
| chr6_1 | exon | 15635059 | 15635353 | 15635059 | ID=Msa0876960-mRNA-1:exon:4481;Parent=Msa0876960-mRNA-1 |
| chr6_1 | five_prime_UTR | 15635306 | 15635353 | 15635306 | ID=Msa0876960-mRNA-1:five_prime_utr;Parent=Msa0876960-mRNA-1 |
| chr6_1 | CDS | 15635059 | 15635305 | 15635059 | ID=Msa0876960-mRNA-1:cds;Parent=Msa0876960-mRNA-1 |
| chr6_1 | CDS | 15634472 | 15634599 | 15634472 | ID=Msa0876960-mRNA-1:cds;Parent=Msa0876960-mRNA-1 |
| chr6_1 | CDS | 15629901 | 15630029 | 15629901 | ID=Msa0876960-mRNA-1:cds;Parent=Msa0876960-mRNA-1 |
| chr6_1 | CDS | 15628531 | 15628713 | 15628531 | ID=Msa0876960-mRNA-1:cds;Parent=Msa0876960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
