AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0944140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0944140 MtrunA17_Chr6g0460951 95.946 222 4 2 1 217 1 222 2.62e-150 425
Msa0944140 MtrunA17_Chr6g0460951 58.252 206 57 4 220 413 39 227 4.86e-69 218
Msa0944140 MtrunA17_Chr6g0460931 93.519 108 5 2 307 413 1 107 2.50e-54 176
Msa0944140 MtrunA17_Chr6g0460931 50.000 102 33 3 133 217 2 102 4.84e-14 68.2
Msa0944140 MtrunA17_Chr6g0460941 78.652 89 19 0 215 303 1 89 3.25e-43 146
Msa0944140 MtrunA17_Chr6g0460941 64.773 88 28 1 40 124 7 94 8.46e-35 124
Msa0944140 MtrunA17_Chr1g0184271 45.745 188 84 5 40 215 12 193 2.21e-42 149
Msa0944140 MtrunA17_Chr1g0184271 55.319 94 39 1 221 311 12 105 2.30e-30 117
Msa0944140 MtrunA17_Chr7g0261031 62.963 108 37 1 39 143 7 114 2.12e-40 143
Msa0944140 MtrunA17_Chr7g0261031 55.000 100 42 1 215 311 2 101 1.49e-31 119
Msa0944140 MtrunA17_Chr7g0260971 66.019 103 32 1 39 138 13 115 2.24e-40 143
Msa0944140 MtrunA17_Chr7g0260971 55.238 105 44 1 212 313 5 109 1.71e-30 117
Msa0944140 MtrunA17_Chr8g0351701 63.725 102 34 1 40 138 23 124 3.87e-39 140
Msa0944140 MtrunA17_Chr8g0351701 54.455 101 36 1 221 311 23 123 5.12e-30 115
Msa0944140 MtrunA17_Chr5g0435641 51.261 119 55 1 39 154 6 124 2.12e-38 137
Msa0944140 MtrunA17_Chr5g0435641 48.000 100 49 1 215 311 1 100 5.06e-26 103
Msa0944140 MtrunA17_Chr1g0184281 62.376 101 35 1 40 137 15 115 5.64e-38 136
Msa0944140 MtrunA17_Chr1g0184281 55.208 96 40 1 221 313 15 110 1.58e-28 111
Msa0944140 MtrunA17_Chr7g0245871 59.804 102 38 1 40 138 27 128 1.27e-37 136
Msa0944140 MtrunA17_Chr7g0245871 49.057 106 44 1 221 316 27 132 2.22e-28 112
Msa0944140 MtrunA17_Chr8g0351721 57.983 119 46 2 40 154 18 136 1.59e-37 135
Msa0944140 MtrunA17_Chr8g0351721 54.255 94 40 1 221 311 18 111 3.64e-28 110
Msa0944140 MtrunA17_Chr7g0245861 64.444 90 27 3 40 124 12 101 1.85e-29 111
Msa0944140 MtrunA17_Chr7g0245861 57.647 85 34 2 221 303 12 96 6.20e-25 99.4
Msa0944140 MtrunA17_Chr3g0114061 36.875 160 82 4 39 191 7 154 3.86e-29 111
Msa0944140 MtrunA17_Chr3g0114061 37.324 142 81 3 219 354 6 145 2.40e-23 95.5
Msa0944140 MtrunA17_Chr4g0043421 36.943 157 83 4 39 188 14 161 4.37e-29 111
Msa0944140 MtrunA17_Chr4g0043421 35.616 146 93 1 219 364 13 157 8.53e-24 97.4
Msa0944140 MtrunA17_Chr4g0058651 49.074 108 53 1 39 144 10 117 6.82e-29 111
Msa0944140 MtrunA17_Chr4g0058651 46.316 95 47 2 220 311 10 103 3.65e-24 99.0
Msa0944140 MtrunA17_Chr2g0311601 44.954 109 56 2 38 143 11 118 1.42e-28 109
Msa0944140 MtrunA17_Chr2g0311601 45.263 95 48 2 220 311 12 105 1.34e-22 93.6
Msa0944140 MtrunA17_Chr3g0129071 48.214 112 54 2 38 146 45 155 5.38e-28 110
Msa0944140 MtrunA17_Chr3g0129071 40.196 102 50 2 220 311 46 146 3.36e-20 89.0
Msa0944140 MtrunA17_Chr3g0117121 48.624 109 52 2 39 145 9 115 9.38e-28 108
Msa0944140 MtrunA17_Chr3g0117121 46.465 99 49 2 216 311 5 102 3.43e-24 99.0
Msa0944140 MtrunA17_Chr3g0106101 47.115 104 51 2 39 139 6 108 1.01e-27 108
Msa0944140 MtrunA17_Chr3g0106101 44.000 100 52 2 215 311 1 99 9.67e-24 97.4
Msa0944140 MtrunA17_Chr6g0449641 45.690 116 57 3 39 151 8 120 1.04e-27 107
Msa0944140 MtrunA17_Chr6g0449641 44.898 98 52 2 216 312 4 100 1.28e-22 93.2
Msa0944140 MtrunA17_Chr7g0227511 49.038 104 49 2 39 139 10 112 1.48e-27 107
Msa0944140 MtrunA17_Chr7g0227511 44.118 102 53 2 213 311 3 103 3.71e-23 95.5
Msa0944140 MtrunA17_Chr5g0437401 47.000 100 51 1 41 138 12 111 1.64e-27 107
Msa0944140 MtrunA17_Chr5g0437401 50.602 83 40 1 219 301 9 90 5.62e-23 95.1
Msa0944140 MtrunA17_Chr5g0438091 46.429 112 56 2 39 147 38 148 4.74e-27 107
Msa0944140 MtrunA17_Chr5g0438091 34.752 141 80 3 199 333 11 145 2.60e-21 91.3
Msa0944140 MtrunA17_Chr5g0402611 50.000 102 49 1 39 138 7 108 1.75e-26 108
Msa0944140 MtrunA17_Chr5g0402611 40.541 148 75 5 216 352 3 148 2.82e-23 99.4
Msa0944140 MtrunA17_Chr5g0437571 45.631 103 54 1 39 139 5 107 2.47e-26 103
Msa0944140 MtrunA17_Chr5g0437571 39.669 121 71 2 220 340 5 123 6.71e-24 97.4
Msa0944140 MtrunA17_Chr4g0030001 42.222 135 66 5 37 161 21 153 2.54e-26 104
Msa0944140 MtrunA17_Chr4g0030001 37.037 135 66 3 198 314 1 134 1.47e-21 91.7
Msa0944140 MtrunA17_Chr3g0115431 47.059 102 52 1 39 138 8 109 1.99e-25 103
Msa0944140 MtrunA17_Chr3g0115431 51.250 80 38 1 219 298 7 85 1.14e-21 92.8
Msa0944140 MtrunA17_Chr6g0449651 43.103 116 60 3 39 151 66 178 4.42e-25 101
Msa0944140 MtrunA17_Chr6g0449651 43.158 95 49 2 217 311 63 152 3.48e-20 88.2
Msa0944140 MtrunA17_Chr3g0113891 44.211 95 51 1 41 133 15 109 8.25e-25 100
Msa0944140 MtrunA17_Chr3g0113891 42.708 96 50 2 219 314 12 102 2.55e-21 90.9
Msa0944140 MtrunA17_Chr3g0097221 43.966 116 60 2 39 152 6 118 1.60e-24 102
Msa0944140 MtrunA17_Chr3g0097221 50.000 84 41 1 215 298 1 83 2.29e-22 96.3
Msa0944140 MtrunA17_Chr1g0200201 43.363 113 62 2 41 151 73 185 5.76e-24 99.4
Msa0944140 MtrunA17_Chr1g0200201 41.935 93 50 2 222 311 73 164 3.14e-19 86.3
Msa0944140 MtrunA17_Chr5g0432451 50.000 108 50 2 38 142 41 147 1.78e-23 98.2
Msa0944140 MtrunA17_Chr5g0432451 47.561 82 42 1 220 301 42 122 4.29e-20 88.6
Msa0944140 MtrunA17_Chr5g0444351 42.857 105 58 1 41 143 6 110 1.14e-22 93.2
Msa0944140 MtrunA17_Chr5g0444351 37.903 124 67 3 222 341 6 123 2.17e-18 81.6
Msa0944140 MtrunA17_Chr8g0374601 38.235 136 76 3 37 168 23 154 5.71e-22 95.1
Msa0944140 MtrunA17_Chr8g0374601 45.455 77 41 1 221 297 26 101 1.91e-17 82.0
Msa0944140 MtrunA17_Chr8g0353981 54.878 82 33 2 39 117 6 86 2.08e-21 92.4
Msa0944140 MtrunA17_Chr8g0353981 43.678 87 48 1 215 301 1 86 4.05e-19 85.9
Msa0944140 MtrunA17_Chr7g0225111 38.532 109 65 1 37 143 2 110 4.04e-21 88.2
Msa0944140 MtrunA17_Chr7g0225111 40.260 77 45 1 222 298 6 81 1.33e-15 72.8
Msa0944140 MtrunA17_Chr8g0374591 38.318 107 64 1 34 138 2 108 1.22e-19 84.3
Msa0944140 MtrunA17_Chr8g0374591 48.052 77 39 1 221 297 8 83 3.11e-19 83.2
Msa0944140 MtrunA17_Chr8g0374581 39.815 108 62 2 35 139 3 110 3.22e-17 80.5
Msa0944140 MtrunA17_Chr8g0374581 40.506 79 45 2 221 298 8 85 2.98e-12 65.9
Msa0944140 MtrunA17_Chr4g0040831 45.333 75 40 1 222 296 16 89 1.07e-15 75.5
Msa0944140 MtrunA17_Chr4g0040831 33.333 105 63 3 41 139 16 119 2.09e-12 65.9
Msa0944140 MtrunA17_Chr4g0059901 38.000 100 60 1 41 138 11 110 1.19e-15 76.6
Msa0944140 MtrunA17_Chr4g0059901 38.710 93 53 2 222 311 11 102 3.30e-15 75.5
Msa0944140 MtrunA17_Chr2g0330201 35.000 100 63 1 41 138 20 119 1.22e-15 77.0
Msa0944140 MtrunA17_Chr2g0330201 31.183 93 60 2 222 311 20 111 4.72e-13 69.3
Msa0944140 MtrunA17_Chr8g0342351 33.043 115 59 3 222 333 13 112 4.83e-15 74.7
Msa0944140 MtrunA17_Chr8g0342351 36.000 100 62 1 41 138 13 112 6.18e-15 74.3
Msa0944140 MtrunA17_Chr6g0452671 32.632 95 63 1 219 313 9 102 1.45e-14 72.0
Msa0944140 MtrunA17_Chr6g0452671 34.000 100 64 1 41 138 12 111 1.62e-13 69.3
Msa0944140 MtrunA17_Chr4g0046201 40.244 82 48 1 220 301 5 85 9.29e-14 71.2
Msa0944140 MtrunA17_Chr6g0452661 33.051 118 70 4 222 333 10 124 1.24e-13 70.5
Msa0944140 MtrunA17_Chr6g0452661 32.727 110 64 4 37 138 3 110 3.65e-12 66.2
Msa0944140 MtrunA17_Chr6g0452691 26.404 178 107 6 222 394 10 168 2.02e-13 68.6
Msa0944140 MtrunA17_Chr6g0452691 37.255 102 59 3 41 138 10 110 5.86e-13 67.0
Msa0944140 MtrunA17_Chr4g0055441 37.079 89 54 2 222 309 3 90 7.45e-13 66.2
Msa0944140 MtrunA17_Chr4g0055441 41.250 80 44 2 41 117 3 82 2.42e-12 64.7
Msa0944140 MtrunA17_Chr2g0326051 36.000 100 56 2 83 176 5 102 6.98e-12 62.4
Msa0944140 MtrunA17_Chr5g0439111 29.605 152 92 5 222 359 10 160 9.74e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0944140 AT3G03760.1 67.347 147 42 2 39 182 50 193 3.60e-55 184
Msa0944140 AT3G03760.1 53.571 112 42 1 220 321 50 161 2.73e-35 131
Msa0944140 AT2G42430.1 49.438 178 56 5 39 182 14 191 5.85e-42 148
Msa0944140 AT2G42430.1 50.000 116 53 2 220 330 14 129 2.02e-30 117
Msa0944140 AT3G58190.1 60.169 118 43 2 40 154 11 127 2.19e-41 146
Msa0944140 AT3G58190.1 52.475 101 38 1 221 311 11 111 1.61e-29 114
Msa0944140 AT2G42440.1 56.881 109 44 1 39 144 6 114 4.04e-37 135
Msa0944140 AT2G42440.1 50.000 100 47 1 215 311 1 100 9.33e-29 113
Msa0944140 AT2G45420.1 62.500 104 36 1 43 143 40 143 8.84e-37 135
Msa0944140 AT2G45420.1 57.143 98 32 1 224 311 40 137 1.83e-28 112
Msa0944140 AT5G06080.1 50.806 124 56 2 39 159 6 127 1.23e-36 132
Msa0944140 AT5G06080.1 43.590 117 54 2 215 321 1 115 4.09e-25 101
Msa0944140 AT4G00220.1 59.615 104 39 1 43 143 20 123 2.11e-36 133
Msa0944140 AT4G00220.1 42.949 156 74 5 224 371 20 168 2.14e-26 106
Msa0944140 AT2G31310.1 54.717 106 45 1 39 141 6 111 2.78e-36 131
Msa0944140 AT2G31310.1 48.000 100 49 1 215 311 1 100 5.53e-29 112
Msa0944140 AT4G00210.1 60.784 102 37 1 40 138 11 112 6.72e-36 131
Msa0944140 AT4G00210.1 46.281 121 53 3 221 338 11 122 3.60e-26 105
Msa0944140 AT2G45410.1 48.299 147 57 5 43 184 19 151 7.38e-34 125
Msa0944140 AT2G45410.1 43.182 132 71 2 224 352 19 149 1.47e-26 105
Msa0944140 AT3G27650.1 50.476 105 48 2 39 140 38 141 7.10e-29 110
Msa0944140 AT3G27650.1 45.882 85 45 1 217 301 35 118 1.65e-21 90.9
Msa0944140 AT1G07900.1 44.538 119 60 3 37 151 30 146 5.32e-28 109
Msa0944140 AT1G07900.1 33.548 155 85 4 220 363 32 179 1.90e-23 97.4
Msa0944140 AT2G30340.1 43.939 132 61 4 38 166 50 171 5.73e-28 111
Msa0944140 AT2G30340.1 38.333 120 61 3 220 329 51 167 6.57e-20 89.4
Msa0944140 AT2G30340.2 43.939 132 61 4 38 166 51 172 5.79e-28 111
Msa0944140 AT2G30340.2 38.333 120 61 3 220 329 52 168 8.68e-20 89.0
Msa0944140 AT5G63090.4 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0944140 AT5G63090.4 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0944140 AT5G63090.3 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0944140 AT5G63090.3 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0944140 AT5G63090.2 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0944140 AT5G63090.2 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0944140 AT5G63090.1 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0944140 AT5G63090.1 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0944140 AT3G11090.1 45.545 101 53 1 41 139 12 112 3.86e-27 106
Msa0944140 AT3G11090.1 38.261 115 70 1 219 333 9 122 9.19e-23 94.7
Msa0944140 AT2G28500.1 46.847 111 53 3 37 143 52 160 6.35e-27 107
Msa0944140 AT2G28500.1 43.158 95 50 2 220 311 54 147 4.36e-21 91.7
Msa0944140 AT2G30130.1 44.355 124 63 3 36 156 4 124 7.98e-27 106
Msa0944140 AT2G30130.1 46.875 96 47 2 219 311 6 100 1.02e-22 95.5
Msa0944140 AT1G16530.1 44.954 109 55 3 38 142 12 119 9.68e-26 102
Msa0944140 AT1G16530.1 36.842 133 81 3 211 342 4 134 1.33e-22 94.4
Msa0944140 AT5G66870.1 41.096 146 73 4 39 181 6 141 9.73e-26 106
Msa0944140 AT5G66870.1 40.945 127 70 3 215 339 1 124 2.20e-23 100
Msa0944140 AT1G31320.1 45.794 107 56 1 39 143 12 118 6.67e-25 100
Msa0944140 AT1G31320.1 37.209 129 74 2 211 339 3 124 9.66e-22 92.0
Msa0944140 AT2G23660.2 43.269 104 57 1 39 140 4 107 2.89e-23 99.8
Msa0944140 AT2G23660.2 53.750 80 36 1 219 298 3 81 1.64e-22 97.4
Msa0944140 AT2G23660.3 43.269 104 57 1 39 140 4 107 2.89e-23 99.8
Msa0944140 AT2G23660.3 53.750 80 36 1 219 298 3 81 1.64e-22 97.4
Msa0944140 AT2G23660.1 43.269 104 57 1 39 140 4 107 2.89e-23 99.8
Msa0944140 AT2G23660.1 53.750 80 36 1 219 298 3 81 1.64e-22 97.4
Msa0944140 AT1G65620.1 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0944140 AT1G65620.1 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0944140 AT1G65620.4 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0944140 AT1G65620.4 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0944140 AT1G65620.3 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0944140 AT1G65620.3 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0944140 AT1G65620.5 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0944140 AT1G65620.5 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0944140 AT1G65620.2 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0944140 AT1G65620.2 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0944140 AT3G26660.1 43.519 108 50 3 41 138 6 112 6.73e-23 93.6
Msa0944140 AT3G26660.1 41.558 77 44 1 222 298 6 81 1.61e-18 81.6
Msa0944140 AT2G40470.2 48.718 117 56 2 38 151 18 133 7.40e-23 95.9
Msa0944140 AT2G40470.2 46.341 82 43 1 220 301 19 99 1.29e-19 87.0
Msa0944140 AT2G40470.1 48.718 117 56 2 38 151 43 158 7.68e-23 96.7
Msa0944140 AT2G40470.1 46.341 82 43 1 220 301 44 124 2.25e-19 86.7
Msa0944140 AT3G26620.1 43.519 108 50 3 41 138 6 112 9.02e-23 93.2
Msa0944140 AT3G26620.1 41.558 77 44 1 222 298 6 81 2.78e-18 80.9
Msa0944140 AT3G50510.1 42.708 96 54 1 214 309 5 99 7.05e-22 93.2
Msa0944140 AT3G50510.1 35.185 108 68 1 33 138 5 112 1.48e-18 84.0
Msa0944140 AT3G50510.2 42.708 96 54 1 214 309 5 99 7.05e-22 93.2
Msa0944140 AT3G50510.2 35.185 108 68 1 33 138 5 112 1.48e-18 84.0
Msa0944140 AT5G35900.1 47.500 80 41 1 219 298 3 81 3.38e-16 77.4
Msa0944140 AT5G35900.1 32.353 102 67 1 39 138 4 105 2.63e-13 68.9
Msa0944140 AT1G72980.1 40.000 110 61 3 39 144 12 120 3.64e-16 77.4
Msa0944140 AT1G72980.1 35.922 103 55 2 219 311 11 112 6.75e-15 73.9
Msa0944140 AT3G13850.1 36.000 100 62 1 41 138 37 136 2.01e-15 76.3
Msa0944140 AT3G13850.1 29.365 126 82 3 222 344 37 158 2.14e-14 73.6
Msa0944140 AT1G06280.1 44.000 75 41 1 222 296 25 98 2.00e-14 72.4
Msa0944140 AT3G47870.1 35.714 84 53 1 219 302 34 116 3.61e-13 70.5
Msa0944140 AT3G47870.1 29.808 104 71 1 41 142 37 140 5.14e-11 63.9

Find 101 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGAAACGGCGGCTGATA+TGG 0.243600 6_3:+20663710 None:intergenic
GCAGCTGTGCACAAGGTCTT+TGG 0.255749 6_3:-20660108 Msa0944140:CDS
AACAACTTCAACCCTGGTTT+TGG 0.268597 6_3:-20663602 Msa0944140:CDS
GTGGACACACAACCATTAAT+TGG 0.284098 6_3:+20659985 None:intergenic
TTGAAGAAGAAGTGTATTAA+TGG 0.285388 6_3:-20660180 Msa0944140:CDS
AGGCTAGCTGATCCAGTTTA+TGG 0.286193 6_3:-20664132 Msa0944140:CDS
AAATTGTTGCAGCAGCTTCC+TGG 0.332792 6_3:+20664172 None:intergenic
TTGTTGGTGGCAGCAAGAAC+AGG 0.345361 6_3:+20659375 None:intergenic
GCGGTGAATAGTTGGAATTT+TGG 0.347398 6_3:+20660059 None:intergenic
AGGATCGCTGATCCAATTAA+TGG 0.374552 6_3:-20659997 Msa0944140:CDS
CCTTCTTGCATTGCAGCAAC+AGG 0.375996 6_3:-20664097 Msa0944140:intron
GACTGTGATGGCTGAGTCAC+AGG 0.379048 6_3:-20664460 None:intergenic
CTCCAGGTTCTCTTATCATC+AGG 0.387227 6_3:-20659262 Msa0944140:CDS
GGTGGTGATGGTAGTAGTTC+GGG 0.392136 6_3:-20664438 Msa0944140:CDS
GTGGACACACAGCCATAAAC+TGG 0.395590 6_3:+20664120 None:intergenic
GAAGCACTTGTCCAACATTC+CGG 0.397219 6_3:-20664205 Msa0944140:CDS
TGCATCTTTGCACCCTACTT+TGG 0.399115 6_3:-20664291 Msa0944140:CDS
TGAAGTTGTTCATGTTCATA+AGG 0.399289 6_3:+20659352 None:intergenic
TGAAGTTGTTCATGTTCATA+AGG 0.399289 6_3:+20663615 None:intergenic
TGCATCTTTGCACCCTACTT+TGG 0.409327 6_3:-20660156 Msa0944140:CDS
TAGCCTAGCTTGAGCCTCAT+AGG 0.409914 6_3:+20664149 None:intergenic
ATGGTAGTAGTTCGGGAAAC+AGG 0.414773 6_3:-20664431 Msa0944140:CDS
TGCACAGGTACATTGAAGTT+TGG 0.417807 6_3:+20663677 None:intergenic
GTTGAAACGGCGGCTGATAT+GGG 0.423151 6_3:+20663711 None:intergenic
TGCAAACTCAATTGATGAAT+AGG 0.424003 6_3:-20663769 Msa0944140:CDS
GCGGCTGTGCACAAGGTGTT+TGG 0.424834 6_3:-20664243 Msa0944140:intron
TGCACAGATACATTGAAGTT+TGG 0.428474 6_3:+20659462 None:intergenic
GATCCTGGCCTGAGCCTCAT+AGG 0.432336 6_3:+20660014 None:intergenic
GGGTGGTGATGGTAGTAGTT+CGG 0.433902 6_3:-20664439 Msa0944140:CDS
GCACCACACGGCGTTATAAC+CGG 0.444947 6_3:+20664348 None:intergenic
GTAGCATTTGCTGATGCTGC+AGG 0.445401 6_3:+20659490 None:intergenic
GTTCATGTTCATAAGGTTGT+TGG 0.448098 6_3:+20659359 None:intergenic
ATATCAGCCGCCGTTTCAAC+TGG 0.453062 6_3:-20663708 Msa0944140:intron
GACTATAACCTATGAGGCTC+AGG 0.457119 6_3:-20660022 Msa0944140:CDS
TTGGAATATGCTGGCTGCAC+AGG 0.466534 6_3:+20663662 None:intergenic
ATTAATTGGATCAGCGATCC+TGG 0.479430 6_3:+20659999 None:intergenic
TTGCAGCAGCTTCCTGGCGA+TGG 0.481070 6_3:+20664178 None:intergenic
GGCTCTAAGCTCTGTGATGA+AGG 0.484149 6_3:+20663560 None:intergenic
TTTCTCAAAACGAGACATCC+TGG 0.484547 6_3:+20663526 None:intergenic
GTTGTTCATGTTCATAAGGT+TGG 0.485083 6_3:+20663619 None:intergenic
GCTTCCTGGCGATGGCTAGC+CGG 0.485119 6_3:+20664186 None:intergenic
TTGAGGAGGAAGTGTAGTAG+TGG 0.488789 6_3:-20664315 Msa0944140:CDS
GATGGAAGGAGATGGATTGT+TGG 0.492226 6_3:+20659428 None:intergenic
CCAAGGTGCGGCTAAGTTTG+CGG 0.493536 6_3:-20664262 Msa0944140:CDS
GATGGATTGTTGGAGTATGC+TGG 0.496824 6_3:+20659438 None:intergenic
AAGAGCAACACAAGACGAAC+CGG 0.499358 6_3:-20664367 Msa0944140:CDS
GGTTGCTGTACCAGTTGAAA+CGG 0.507203 6_3:+20663698 None:intergenic
GGTGGAAGCAGATGAGTTGT+TGG 0.513070 6_3:+20663643 None:intergenic
TCCATTGTGAGGCCAAAACC+AGG 0.515508 6_3:+20663590 None:intergenic
TTGCTGATGCTGCAGGTCTG+TGG 0.518208 6_3:+20659497 None:intergenic
GCGATGGCTAGCCGGAATGT+TGG 0.521327 6_3:+20664194 None:intergenic
AACATGAACAACTTCAACCC+TGG 0.523993 6_3:-20659345 Msa0944140:CDS
AACATGAACAACTTCAACCC+TGG 0.523993 6_3:-20663608 Msa0944140:CDS
CATGTTCATGAGATCTTCGA+TGG 0.526356 6_3:+20659410 None:intergenic
TGCTGCAACAATTTCCTATG+AGG 0.529239 6_3:-20664163 Msa0944140:CDS
GTTCATGTTCATAAGGTTGG+TGG 0.542354 6_3:+20663622 None:intergenic
CATGTTCATAAGGTTGTTGG+TGG 0.547943 6_3:+20659362 None:intergenic
AATGAAGACTATAACCTATG+AGG 0.550364 6_3:-20660028 Msa0944140:CDS
CAGATAAATCGACACCGTGT+GGG 0.552619 6_3:-20660215 Msa0944140:CDS
ACCTTGGTCAGTACCAAAGT+AGG 0.553693 6_3:+20664278 None:intergenic
GCTGAGTCACAGGGTGGTGA+TGG 0.557362 6_3:-20664450 Msa0944140:CDS
TCCATTGTAGTATCAAAACC+AGG 0.562905 6_3:+20659327 None:intergenic
TAACCTATGAGGCTCAGGCC+AGG 0.563627 6_3:-20660017 Msa0944140:CDS
TTCATGAGATCTTCGATGGA+AGG 0.566318 6_3:+20659414 None:intergenic
TAGCTTTGCAGCTGTGCACA+AGG 0.566837 6_3:-20660115 Msa0944140:CDS
AGATCTTCGATGGAAGGAGA+TGG 0.567577 6_3:+20659420 None:intergenic
CATTCCGGCTAGCCATCGCC+AGG 0.568999 6_3:-20664190 Msa0944140:CDS
CTCAAAGCTCTGTGATGATG+AGG 0.569176 6_3:+20659296 None:intergenic
AAACTCAATTGATGAATAGG+AGG 0.570071 6_3:-20663766 Msa0944140:CDS
CCTGTTGCTGCAATGCAAGA+AGG 0.570706 6_3:+20664097 None:intergenic
TCCCTGATGATAAGAGAACC+TGG 0.572844 6_3:+20659260 None:intergenic
CCGCAAACTTAGCCGCACCT+TGG 0.577994 6_3:+20664262 None:intergenic
CATGTTCATAAGGTTGGTGG+TGG 0.580499 6_3:+20663625 None:intergenic
TTTCCTATGAGGCTCAAGCT+AGG 0.591556 6_3:-20664152 Msa0944140:CDS
TCCAGGTTCTCTTATCATCA+GGG 0.596198 6_3:-20659261 Msa0944140:CDS
CCTTGGTCAGTACCAAAGTA+GGG 0.599955 6_3:+20664279 None:intergenic
CTGTTGCTGCAATGCAAGAA+GGG 0.602626 6_3:+20664098 None:intergenic
GATGAGTTGTTGGAATATGC+TGG 0.605347 6_3:+20663653 None:intergenic
TTGAAACGGCGGCTGATATG+GGG 0.606891 6_3:+20663712 None:intergenic
GCAGATAAATCGACACCGTG+TGG 0.608982 6_3:-20660216 Msa0944140:intron
CCCTACTTTGGTACTGACCA+AGG 0.613176 6_3:-20664279 Msa0944140:CDS
GGTGGAGGCACTGCAAGCAG+AGG 0.616998 6_3:-20659580 Msa0944140:CDS
GGACAAGATCTTCAACACAT+TGG 0.623216 6_3:+20660080 None:intergenic
TGTTGGTGGCAGCAAGAACA+GGG 0.624562 6_3:+20659376 None:intergenic
GGTGGCAGCTATGCAAGCAG+AGG 0.634590 6_3:-20663801 Msa0944140:CDS
AGATAAATCGACACCGTGTG+GGG 0.638818 6_3:-20660214 Msa0944140:CDS
AAGTGCTTGCAAGCCCCACA+CGG 0.644781 6_3:+20660201 None:intergenic
GTGGTGCTTGCAAGTTCTTG+AGG 0.646814 6_3:-20664332 Msa0944140:CDS
TCAAAGCTCTGTGATGATGA+GGG 0.650661 6_3:+20659297 None:intergenic
CTTTGGTACTGACCAAGGTG+CGG 0.655594 6_3:-20664274 Msa0944140:CDS
AAAGCTCAGCAGATGAACAA+CGG 0.670494 6_3:-20659546 Msa0944140:CDS
AAGGTGCCGTCTCCATTGTG+AGG 0.672207 6_3:+20663579 None:intergenic
ACTGTGATGGCTGAGTCACA+GGG 0.673977 6_3:-20664459 None:intergenic
GTGCTTGCAAGTTCTTGAGG+AGG 0.680170 6_3:-20664329 Msa0944140:CDS
TTGCTGCAATGCAAGAAGGG+TGG 0.687118 6_3:+20664101 None:intergenic
TGCTGTACCAGTTGAAACGG+CGG 0.689555 6_3:+20663701 None:intergenic
AAGAACTTGCAAGCACCACA+CGG 0.689772 6_3:+20664336 None:intergenic
CCATTGTAGTATCAAAACCA+GGG 0.697403 6_3:+20659328 None:intergenic
CCATTGTGAGGCCAAAACCA+GGG 0.697828 6_3:+20663591 None:intergenic
GAACCGGTTATAACGCCGTG+TGG 0.738703 6_3:-20664351 Msa0944140:CDS
GTGATGGCTGAGTCACAGGG+TGG 0.776633 6_3:-20664456 Msa0944140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATATTATTAATAA+AGG - chr6_3:20661327-20661346 Msa0944140:intron 0.0%
!! AATAAAAGAAGAAAAAAAAA+TGG + chr6_3:20660348-20660367 None:intergenic 10.0%
!! TATATGAAATGTAAAATATA+TGG - chr6_3:20660468-20660487 Msa0944140:intron 10.0%
!! TTGTTTAAGTATATTATTTA+AGG + chr6_3:20661498-20661517 None:intergenic 10.0%
!! AATTAATTATAACTTGAATT+TGG + chr6_3:20662736-20662755 None:intergenic 10.0%
!! TTATTGATGAGAAAATTATT+AGG + chr6_3:20659750-20659769 None:intergenic 15.0%
!!! ATTTTACATTTCATATAATC+CGG + chr6_3:20660465-20660484 None:intergenic 15.0%
!! GAAAAAAATGTATTTAGTAT+TGG - chr6_3:20661364-20661383 Msa0944140:intron 15.0%
!!! AGTATATTGGTTTTAAATTA+TGG + chr6_3:20661590-20661609 None:intergenic 15.0%
!!! TGAAAGGAAATTTATTTTTA+TGG + chr6_3:20661778-20661797 None:intergenic 15.0%
!! AATTTGGATTTAAGTATTTA+TGG + chr6_3:20661832-20661851 None:intergenic 15.0%
!! ATAAATACTTAAATCCAAAT+TGG - chr6_3:20661831-20661850 Msa0944140:intron 15.0%
!! AATATTTAATATGTTGAGTA+GGG + chr6_3:20661953-20661972 None:intergenic 15.0%
!!! TATGTAAAAAATCTCTTTTT+AGG + chr6_3:20662055-20662074 None:intergenic 15.0%
!! AATAAGATATTACTTTGAAT+GGG + chr6_3:20662343-20662362 None:intergenic 15.0%
!! AAATAAGATATTACTTTGAA+TGG + chr6_3:20662344-20662363 None:intergenic 15.0%
!! CAAGTTATAATTAATTATAG+AGG - chr6_3:20662740-20662759 Msa0944140:intron 15.0%
!! TTTGTTGAAAAGAAATTAAA+TGG + chr6_3:20664004-20664023 None:intergenic 15.0%
!! AGAATATTTATCTATCTCTA+TGG - chr6_3:20659636-20659655 Msa0944140:intron 20.0%
!!! CATTCTTTCTTTGAAATTAA+AGG + chr6_3:20659680-20659699 None:intergenic 20.0%
!! ATGATGAATAACTTACATTA+TGG - chr6_3:20659872-20659891 Msa0944140:intron 20.0%
!! AAGTAATATTGTTGAATACT+TGG + chr6_3:20660267-20660286 None:intergenic 20.0%
!! TAAACAACTAAACATAAAGA+TGG - chr6_3:20660564-20660583 Msa0944140:intron 20.0%
!!! ATTTTCGTTTTAATGAGATA+GGG + chr6_3:20660957-20660976 None:intergenic 20.0%
!!! TATTTTCGTTTTAATGAGAT+AGG + chr6_3:20660958-20660977 None:intergenic 20.0%
!! AATAAAGGACTACTAAAATA+TGG - chr6_3:20661342-20661361 Msa0944140:intron 20.0%
!! ATTCATATATTTAATACCCT+TGG - chr6_3:20661739-20661758 Msa0944140:intron 20.0%
!! CAATATTTAATATGTTGAGT+AGG + chr6_3:20661954-20661973 None:intergenic 20.0%
!!! TCAAGAGATTTTACTATAAT+AGG + chr6_3:20662020-20662039 None:intergenic 20.0%
!!! TATAACTTGAATTTGGAATT+TGG + chr6_3:20662729-20662748 None:intergenic 20.0%
!!! GTGATTAAAGTATTAGTTAT+TGG + chr6_3:20663186-20663205 None:intergenic 20.0%
!!! TTTTGTTTTTTACCAAAGTA+GGG + chr6_3:20663563-20663582 None:intergenic 20.0%
!!! ATTTTGTTTTTTACCAAAGT+AGG + chr6_3:20663564-20663583 None:intergenic 20.0%
!! TCAACAAAAATCAGAATATA+TGG - chr6_3:20664016-20664035 Msa0944140:intron 20.0%
!! CAACAAAAATCAGAATATAT+GGG - chr6_3:20664017-20664036 Msa0944140:intron 20.0%
!! ATAATGAATAACTTACCTTA+TGG - chr6_3:20664093-20664112 Msa0944140:intron 20.0%
! TCCTTTATTAAGTATCTTGA+TGG - chr6_3:20660427-20660446 Msa0944140:intron 25.0%
! TCCATCAAGATACTTAATAA+AGG + chr6_3:20660431-20660450 None:intergenic 25.0%
! TTGATGGAATGTAAAATTTC+CGG - chr6_3:20660443-20660462 Msa0944140:intron 25.0%
! ACTATCTTTATGTTGAATCT+TGG + chr6_3:20660663-20660682 None:intergenic 25.0%
!!! ATGCTTGTAAAATTGATTTG+TGG + chr6_3:20661099-20661118 None:intergenic 25.0%
!!! TTTACTTGTGTTTTTATGCA+TGG + chr6_3:20661151-20661170 None:intergenic 25.0%
! TAACATTAGCAAACATTAGA+AGG - chr6_3:20661192-20661211 Msa0944140:intron 25.0%
! TAAAACCAATATACTACACT+CGG - chr6_3:20661595-20661614 Msa0944140:intron 25.0%
! TATCTACGTCAAAATATCAA+AGG - chr6_3:20661804-20661823 Msa0944140:intron 25.0%
! TTTATTAATGCATCGTATGA+AGG + chr6_3:20661870-20661889 None:intergenic 25.0%
!! GAGATTTTACTATAATAGGA+AGG + chr6_3:20662016-20662035 None:intergenic 25.0%
!!! AACTCTAAGATTATCATTCA+AGG - chr6_3:20662168-20662187 Msa0944140:intron 25.0%
!!! ACTCTAAGATTATCATTCAA+GGG - chr6_3:20662169-20662188 Msa0944140:intron 25.0%
!! TTAGCTTTCTTAATTGATTC+CGG - chr6_3:20662400-20662419 Msa0944140:intron 25.0%
! TTCAAACTAAAAGTCGATTA+TGG - chr6_3:20662493-20662512 Msa0944140:intron 25.0%
!!! AGTATAATTGATTTTCCTTC+TGG + chr6_3:20662560-20662579 None:intergenic 25.0%
!!! AATTGATTCTAGAATTCGAA+AGG + chr6_3:20662610-20662629 None:intergenic 25.0%
! ATAAAGTTGAAGCTGAAATA+TGG + chr6_3:20662660-20662679 None:intergenic 25.0%
! AAATCAATTCTAGTCCATAA+AGG - chr6_3:20662765-20662784 Msa0944140:intron 25.0%
! GAATAAAATATTGACATGGT+GGG + chr6_3:20663144-20663163 None:intergenic 25.0%
! TGAATAAAATATTGACATGG+TGG + chr6_3:20663145-20663164 None:intergenic 25.0%
! TCGCAATTTATAACATTGTT+GGG + chr6_3:20663373-20663392 None:intergenic 25.0%
! ATCGCAATTTATAACATTGT+TGG + chr6_3:20663374-20663393 None:intergenic 25.0%
!!! CATTGATTAATGTTTTAGTG+TGG - chr6_3:20663422-20663441 Msa0944140:intron 25.0%
! AATACAATCGATGTAACTAT+AGG + chr6_3:20663450-20663469 None:intergenic 25.0%
!! TTGAAGAAGAAGTGTATTAA+TGG - chr6_3:20663524-20663543 Msa0944140:intron 25.0%
! TTCTGTAAACGGTTTATTAA+AGG + chr6_3:20663808-20663827 None:intergenic 25.0%
! AAATGAAGTCTTTCTGTAAA+CGG + chr6_3:20663819-20663838 None:intergenic 25.0%
!! TTACAGAAAGACTTCATTTT+CGG - chr6_3:20663820-20663839 Msa0944140:intron 25.0%
! TCAAGGTCTCAAATAAATTA+TGG + chr6_3:20663864-20663883 None:intergenic 25.0%
! AATGGAGGATTATTTAATCT+AGG + chr6_3:20663986-20664005 None:intergenic 25.0%
! GTTGAAAAGAAATTAAATGG+AGG + chr6_3:20664001-20664020 None:intergenic 25.0%
! ATATATGGGACAAAAGTAAA+AGG - chr6_3:20664031-20664050 Msa0944140:intron 25.0%
ACTTGAGGTTACATTAATCT+TGG + chr6_3:20659843-20659862 None:intergenic 30.0%
TGCAAACTCAATTGATGAAT+AGG - chr6_3:20659935-20659954 Msa0944140:intron 30.0%
AAACTCAATTGATGAATAGG+AGG - chr6_3:20659938-20659957 Msa0944140:intron 30.0%
TGAAGTTGTTCATGTTCATA+AGG + chr6_3:20660092-20660111 None:intergenic 30.0%
! ATGATGGTGCAGTAATATAA+TGG + chr6_3:20660312-20660331 None:intergenic 30.0%
AATAATGCTATAGGGGATAA+AGG + chr6_3:20660375-20660394 None:intergenic 30.0%
TCCTTGTGAATAATGCTATA+GGG + chr6_3:20660383-20660402 None:intergenic 30.0%
ATCCTTGTGAATAATGCTAT+AGG + chr6_3:20660384-20660403 None:intergenic 30.0%
TCATTTAACAGCTTAATGCT+AGG + chr6_3:20660524-20660543 None:intergenic 30.0%
TCTGATACTAATTGCAATTG+AGG + chr6_3:20660619-20660638 None:intergenic 30.0%
CTAGTTTCCACAATTATTAC+CGG + chr6_3:20660752-20660771 None:intergenic 30.0%
AAACTAGAAGTGATTGAATG+TGG - chr6_3:20660765-20660784 Msa0944140:intron 30.0%
CAATCTCAATTGTGTAATGA+AGG - chr6_3:20660926-20660945 Msa0944140:intron 30.0%
!!! TGGTTTTTTGTGCGAAAAAA+AGG + chr6_3:20661079-20661098 None:intergenic 30.0%
GCATTCATGTAGAGATTAAA+AGG - chr6_3:20661115-20661134 Msa0944140:intron 30.0%
TTCATGTAGAGATTAAAAGG+AGG - chr6_3:20661118-20661137 Msa0944140:intron 30.0%
GACGTAGATAAGTAATTGAA+AGG + chr6_3:20661794-20661813 None:intergenic 30.0%
AATATAAACTGCTTGTAGAC+TGG + chr6_3:20661914-20661933 None:intergenic 30.0%
TAATAGGAAGGCAAGTATTT+AGG + chr6_3:20662004-20662023 None:intergenic 30.0%
TAAGATTATCATTCAAGGGA+AGG - chr6_3:20662173-20662192 Msa0944140:intron 30.0%
!! AATGTAAAAGTGTCTGATGT+AGG + chr6_3:20662284-20662303 None:intergenic 30.0%
!! GGCTTGTGTTTGTTATTAAT+AGG + chr6_3:20662317-20662336 None:intergenic 30.0%
TACCTTCAATTCACTTTAAC+CGG + chr6_3:20662422-20662441 None:intergenic 30.0%
! AACTAAGAATCTTTTCCAGA+AGG - chr6_3:20662542-20662561 Msa0944140:intron 30.0%
TTGAAATCACTAAAACGCAT+CGG - chr6_3:20662579-20662598 Msa0944140:intron 30.0%
!! CTACCATTTTGATGTAAAGT+AGG + chr6_3:20663008-20663027 None:intergenic 30.0%
CTACTTTACATCAAAATGGT+AGG - chr6_3:20663006-20663025 Msa0944140:intron 30.0%
! TGGAGAGTACAAGAAAAAAA+GGG + chr6_3:20663080-20663099 None:intergenic 30.0%
GCGTGAATAAAATATTGACA+TGG + chr6_3:20663148-20663167 None:intergenic 30.0%
TTATATGTGACGATTTGTGA+GGG + chr6_3:20663343-20663362 None:intergenic 30.0%
CAATTTATAACATTGTTGGG+TGG + chr6_3:20663370-20663389 None:intergenic 30.0%
GTTGTGACTATATATAGTTG+TGG + chr6_3:20663403-20663422 None:intergenic 30.0%
TATTTGTCTGTGATTCTCTA+TGG - chr6_3:20663466-20663485 Msa0944140:intron 30.0%
!!! TAGTCTTCATTGCTTTTTTG+CGG + chr6_3:20663667-20663686 None:intergenic 30.0%
AATGAAGACTATAACCTATG+AGG - chr6_3:20663676-20663695 Msa0944140:CDS 30.0%
! AATTTATTTGAGACCTTGAG+AGG - chr6_3:20663865-20663884 Msa0944140:intron 30.0%
TGAAGTTGTTCATGTTCATA+AGG + chr6_3:20660092-20660111 None:intergenic 30.0%
GTTGTTCATGTTCATAAGGT+TGG + chr6_3:20660088-20660107 None:intergenic 35.0%
GAAAGATGATTAAGAACTCC+AGG - chr6_3:20660197-20660216 Msa0944140:CDS 35.0%
TGGAAATACATTTGACGAGA+TGG + chr6_3:20660292-20660311 None:intergenic 35.0%
TGGAAATACATTGACGATGA+TGG + chr6_3:20660328-20660347 None:intergenic 35.0%
CCTTGTGAATAATGCTATAG+GGG + chr6_3:20660382-20660401 None:intergenic 35.0%
ACAGCTTAATGCTAGGATTT+AGG + chr6_3:20660517-20660536 None:intergenic 35.0%
TAACACTCTTCGAACTGTTA+TGG - chr6_3:20660690-20660709 Msa0944140:intron 35.0%
! TATTGATAACCAAGGAAGCA+CGG + chr6_3:20661051-20661070 None:intergenic 35.0%
! AGGTGAACTATTGATAACCA+AGG + chr6_3:20661059-20661078 None:intergenic 35.0%
TTTAATACCCTTGGCATCTT+AGG - chr6_3:20661748-20661767 Msa0944140:intron 35.0%
TTAATACCCTTGGCATCTTA+GGG - chr6_3:20661749-20661768 Msa0944140:intron 35.0%
!! TATTGATTCTGCCTTCTGAT+CGG - chr6_3:20661969-20661988 Msa0944140:intron 35.0%
TAGGCTATAGGTTAAGAGTA+AGG + chr6_3:20662096-20662115 None:intergenic 35.0%
TTGTTAAGATGGTAGGCTAT+AGG + chr6_3:20662108-20662127 None:intergenic 35.0%
!! TAATCCGTAGCTTGTTAAGA+TGG + chr6_3:20662119-20662138 None:intergenic 35.0%
! TAACAAGCTACGGATTAATG+TGG - chr6_3:20662122-20662141 Msa0944140:intron 35.0%
CAAGGGAAGGTTGTAAAAAA+TGG - chr6_3:20662186-20662205 Msa0944140:intron 35.0%
GATATTACTTTGAATGGGAC+TGG + chr6_3:20662338-20662357 None:intergenic 35.0%
TTCCGGTTAAAGTGAATTGA+AGG - chr6_3:20662417-20662436 Msa0944140:intron 35.0%
! GCACAAAGTTGATTCCTTTA+TGG + chr6_3:20662782-20662801 None:intergenic 35.0%
GAATCAACTTTGTGCTTGTT+TGG - chr6_3:20662787-20662806 Msa0944140:intron 35.0%
! CAATAGTTTCCTTTTTGACG+TGG + chr6_3:20662815-20662834 None:intergenic 35.0%
! AATTCCAGCTTTGACGTAAT+CGG + chr6_3:20662839-20662858 None:intergenic 35.0%
GTGTTTGATTGGATATACGT+TGG + chr6_3:20662905-20662924 None:intergenic 35.0%
ACGCTCATATAGTGTTTGAT+TGG + chr6_3:20662916-20662935 None:intergenic 35.0%
ATCAAACACTATATGAGCGT+AGG - chr6_3:20662916-20662935 Msa0944140:intron 35.0%
TCAAACACTATATGAGCGTA+GGG - chr6_3:20662917-20662936 Msa0944140:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG - chr6_3:20662974-20662993 Msa0944140:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr6_3:20662979-20662998 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr6_3:20662979-20662998 Msa0944140:intron 35.0%
CTGCCTACTTTACATCAAAA+TGG - chr6_3:20663002-20663021 Msa0944140:intron 35.0%
TTAAAGCTCCTGTATTTGCA+GGG + chr6_3:20663045-20663064 None:intergenic 35.0%
ATTAAAGCTCCTGTATTTGC+AGG + chr6_3:20663046-20663065 None:intergenic 35.0%
! ATACAGGAGCTTTAATGCAT+CGG - chr6_3:20663050-20663069 Msa0944140:intron 35.0%
! GTGGAGAGTACAAGAAAAAA+AGG + chr6_3:20663081-20663100 None:intergenic 35.0%
TATGTGAGAGAAAGAGTTCA+AGG + chr6_3:20663256-20663275 None:intergenic 35.0%
TATATGTGACGATTTGTGAG+GGG + chr6_3:20663342-20663361 None:intergenic 35.0%
CTTATATGTGACGATTTGTG+AGG + chr6_3:20663344-20663363 None:intergenic 35.0%
! GAAAGACTTCATTTTCGGTA+AGG - chr6_3:20663825-20663844 Msa0944140:intron 35.0%
AACATTTGCTTAACCCACTT+GGG + chr6_3:20663930-20663949 None:intergenic 35.0%
TGCACAGATACATTGAAGTT+TGG + chr6_3:20664245-20664264 None:intergenic 35.0%
GTTCATGTTCATAAGGTTGT+TGG + chr6_3:20664348-20664367 None:intergenic 35.0%
CCATTGTAGTATCAAAACCA+GGG + chr6_3:20664379-20664398 None:intergenic 35.0%
TCCATTGTAGTATCAAAACC+AGG + chr6_3:20664380-20664399 None:intergenic 35.0%
TGCTGCAACAATTTCCTATG+AGG - chr6_3:20659541-20659560 Msa0944140:CDS 40.0%
CATCATTCATTCACGACTTG+AGG + chr6_3:20659858-20659877 None:intergenic 40.0%
TGCACAGGTACATTGAAGTT+TGG + chr6_3:20660030-20660049 None:intergenic 40.0%
GATGAGTTGTTGGAATATGC+TGG + chr6_3:20660054-20660073 None:intergenic 40.0%
GTTCATGTTCATAAGGTTGG+TGG + chr6_3:20660085-20660104 None:intergenic 40.0%
AACATGAACAACTTCAACCC+TGG - chr6_3:20660096-20660115 Msa0944140:CDS 40.0%
! AACAACTTCAACCCTGGTTT+TGG - chr6_3:20660102-20660121 Msa0944140:CDS 40.0%
! TAGAGCCTTTTCAAAACTCC+AGG - chr6_3:20660160-20660179 Msa0944140:CDS 40.0%
!!! GACATCCTGGAGTTTTGAAA+AGG + chr6_3:20660168-20660187 None:intergenic 40.0%
TTTCTCAAAACGAGACATCC+TGG + chr6_3:20660181-20660200 None:intergenic 40.0%
TTCCTCATAATGAGACATCC+TGG + chr6_3:20660218-20660237 None:intergenic 40.0%
CCCCTATAGCATTATTCACA+AGG - chr6_3:20660379-20660398 Msa0944140:intron 40.0%
ACTATCACTAACACAGACAC+CGG - chr6_3:20660730-20660749 Msa0944140:intron 40.0%
ACAGACACCGGTAATAATTG+TGG - chr6_3:20660742-20660761 Msa0944140:intron 40.0%
TGTCGAACATTGACAAGTGT+CGG - chr6_3:20660827-20660846 Msa0944140:intron 40.0%
AGATTGAGCGTATCAGGAAA+AGG + chr6_3:20660912-20660931 None:intergenic 40.0%
CAATTGAGATTGAGCGTATC+AGG + chr6_3:20660918-20660937 None:intergenic 40.0%
! CAACTTTCAAGTGTCTTCTG+AGG - chr6_3:20660995-20661014 Msa0944140:intron 40.0%
AACCAATATACTACACTCGG+TGG - chr6_3:20661598-20661617 Msa0944140:intron 40.0%
GAGAAAGATGCGAACCAATT+TGG + chr6_3:20661848-20661867 None:intergenic 40.0%
! ATTGATTCTGCCTTCTGATC+GGG - chr6_3:20661970-20661989 Msa0944140:intron 40.0%
GGAAGGCAAGTATTTAGGTA+TGG + chr6_3:20661999-20662018 None:intergenic 40.0%
CCTACCATCTTAACAAGCTA+CGG - chr6_3:20662112-20662131 Msa0944140:intron 40.0%
ATCAATCCTAGTTTCTGCTC+TGG - chr6_3:20662689-20662708 Msa0944140:intron 40.0%
! TGTTTGGAACCACGTCAAAA+AGG - chr6_3:20662803-20662822 Msa0944140:intron 40.0%
! ATTCCAGCTTTGACGTAATC+GGG + chr6_3:20662838-20662857 None:intergenic 40.0%
TTGCTTAGACGACAACACAT+TGG - chr6_3:20662861-20662880 Msa0944140:intron 40.0%
! TGATTGGATATACGTTGGCT+TGG + chr6_3:20662900-20662919 None:intergenic 40.0%
TATGAGCGTAGGGTTATATC+TGG - chr6_3:20662927-20662946 Msa0944140:intron 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG - chr6_3:20662973-20662992 Msa0944140:intron 40.0%
! TACAGGAGCTTTAATGCATC+GGG - chr6_3:20663051-20663070 Msa0944140:intron 40.0%
TGTGTGAAACTTACCTGGAA+AGG + chr6_3:20663112-20663131 None:intergenic 40.0%
TCGTTTGTGTGAAACTTACC+TGG + chr6_3:20663117-20663136 None:intergenic 40.0%
TGTTGAATAGCACGTGGTAT+GGG + chr6_3:20663221-20663240 None:intergenic 40.0%
!! AAAGAGTTCAAGGTTGGTGA+GGG + chr6_3:20663246-20663265 None:intergenic 40.0%
TGAGAGAAAGAGTTCAAGGT+TGG + chr6_3:20663252-20663271 None:intergenic 40.0%
GGACAAGATCTTCAACACAT+TGG + chr6_3:20663627-20663646 None:intergenic 40.0%
! GCGGTGAATAGTTGGAATTT+TGG + chr6_3:20663648-20663667 None:intergenic 40.0%
!!! GCTTTTTTGCGGTGAATAGT+TGG + chr6_3:20663656-20663675 None:intergenic 40.0%
ATTAATTGGATCAGCGATCC+TGG + chr6_3:20663708-20663727 None:intergenic 40.0%
AGGATCGCTGATCCAATTAA+TGG - chr6_3:20663707-20663726 Msa0944140:intron 40.0%
GTGGACACACAACCATTAAT+TGG + chr6_3:20663722-20663741 None:intergenic 40.0%
! TTTCTCCAAAGCACTAATGG+TGG + chr6_3:20663741-20663760 None:intergenic 40.0%
! CTGTTTCTCCAAAGCACTAA+TGG + chr6_3:20663744-20663763 None:intergenic 40.0%
!! CATTAGTGCTTTGGAGAAAC+AGG - chr6_3:20663742-20663761 Msa0944140:CDS 40.0%
GAACATTTGCTTAACCCACT+TGG + chr6_3:20663931-20663950 None:intergenic 40.0%
AAAGCTCAGCAGATGAACAA+CGG - chr6_3:20664158-20664177 Msa0944140:CDS 40.0%
TTCATGAGATCTTCGATGGA+AGG + chr6_3:20664293-20664312 None:intergenic 40.0%
CATGTTCATGAGATCTTCGA+TGG + chr6_3:20664297-20664316 None:intergenic 40.0%
CATGTTCATAAGGTTGTTGG+TGG + chr6_3:20664345-20664364 None:intergenic 40.0%
AACATGAACAACTTCAACCC+TGG - chr6_3:20660096-20660115 Msa0944140:CDS 40.0%
!!! CCCTGGTTTTGATACTACAA+TGG - chr6_3:20664376-20664395 Msa0944140:CDS 40.0%
! TCAAAGCTCTGTGATGATGA+GGG + chr6_3:20664410-20664429 None:intergenic 40.0%
! TTGAGCCTTTTCAAAACTCC+AGG - chr6_3:20664426-20664445 Msa0944140:CDS 40.0%
!!! GAGAACCTGGAGTTTTGAAA+AGG + chr6_3:20664434-20664453 None:intergenic 40.0%
TCCAGGTTCTCTTATCATCA+GGG - chr6_3:20664443-20664462 Msa0944140:CDS 40.0%
ATGGTAGTAGTTCGGGAAAC+AGG - chr6_3:20659273-20659292 Msa0944140:CDS 45.0%
AAGAGCAACACAAGACGAAC+CGG - chr6_3:20659337-20659356 Msa0944140:CDS 45.0%
AAGAACTTGCAAGCACCACA+CGG + chr6_3:20659371-20659390 None:intergenic 45.0%
! TTGAGGAGGAAGTGTAGTAG+TGG - chr6_3:20659389-20659408 Msa0944140:CDS 45.0%
TGCATCTTTGCACCCTACTT+TGG - chr6_3:20659413-20659432 Msa0944140:CDS 45.0%
CCTTGGTCAGTACCAAAGTA+GGG + chr6_3:20659428-20659447 None:intergenic 45.0%
ACCTTGGTCAGTACCAAAGT+AGG + chr6_3:20659429-20659448 None:intergenic 45.0%
! GAAGCACTTGTCCAACATTC+CGG - chr6_3:20659499-20659518 Msa0944140:CDS 45.0%
AAATTGTTGCAGCAGCTTCC+TGG + chr6_3:20659535-20659554 None:intergenic 45.0%
TTTCCTATGAGGCTCAAGCT+AGG - chr6_3:20659552-20659571 Msa0944140:CDS 45.0%
! AGGCTAGCTGATCCAGTTTA+TGG - chr6_3:20659572-20659591 Msa0944140:CDS 45.0%
CTGTTGCTGCAATGCAAGAA+GGG + chr6_3:20659609-20659628 None:intergenic 45.0%
ACTTACATTATGGCCGATGC+AGG - chr6_3:20659882-20659901 Msa0944140:intron 45.0%
GGTTGCTGTACCAGTTGAAA+CGG + chr6_3:20660009-20660028 None:intergenic 45.0%
!! CATGTTCATAAGGTTGGTGG+TGG + chr6_3:20660082-20660101 None:intergenic 45.0%
! TTTTGGCCTCACAATGGAGA+CGG - chr6_3:20660119-20660138 Msa0944140:CDS 45.0%
CTCCAGGATGTCTCATTATG+AGG - chr6_3:20660213-20660232 Msa0944140:CDS 45.0%
ACACTTGACACAGACACTTG+TGG + chr6_3:20660791-20660810 None:intergenic 45.0%
AGTGTCTGTGTCAAGTGTGT+CGG - chr6_3:20660793-20660812 Msa0944140:intron 45.0%
CCTTCCTCTGTTGTCAAACA+CGG + chr6_3:20661682-20661701 None:intergenic 45.0%
TGGTAACCCTAAGATGCCAA+GGG + chr6_3:20661758-20661777 None:intergenic 45.0%
ATGGTAACCCTAAGATGCCA+AGG + chr6_3:20661759-20661778 None:intergenic 45.0%
! CTGCTTGTAGACTGGTGTTA+TGG + chr6_3:20661906-20661925 None:intergenic 45.0%
!! CCGTAGCTTGTTAAGATGGT+AGG + chr6_3:20662115-20662134 None:intergenic 45.0%
AATCCTAGTTTCTGCTCTGG+AGG - chr6_3:20662692-20662711 Msa0944140:intron 45.0%
TATTTGCAGGGTTCGGAAAG+GGG + chr6_3:20663033-20663052 None:intergenic 45.0%
GTATTTGCAGGGTTCGGAAA+GGG + chr6_3:20663034-20663053 None:intergenic 45.0%
TGTATTTGCAGGGTTCGGAA+AGG + chr6_3:20663035-20663054 None:intergenic 45.0%
TTTCCGAACCCTGCAAATAC+AGG - chr6_3:20663034-20663053 Msa0944140:intron 45.0%
TCCACGAAGATAACCTTTCC+AGG - chr6_3:20663096-20663115 Msa0944140:intron 45.0%
ACCTGGAAAGGTTATCTTCG+TGG + chr6_3:20663100-20663119 None:intergenic 45.0%
TTGAATAGCACGTGGTATGG+GGG + chr6_3:20663219-20663238 None:intergenic 45.0%
GTTGAATAGCACGTGGTATG+GGG + chr6_3:20663220-20663239 None:intergenic 45.0%
GTGTTGAATAGCACGTGGTA+TGG + chr6_3:20663222-20663241 None:intergenic 45.0%
!! GAAAGAGTTCAAGGTTGGTG+AGG + chr6_3:20663247-20663266 None:intergenic 45.0%
GTTGGTCATGTGAATGTGGT+TGG + chr6_3:20663312-20663331 None:intergenic 45.0%
GAACGTTGGTCATGTGAATG+TGG + chr6_3:20663316-20663335 None:intergenic 45.0%
CAGATAAATCGACACCGTGT+GGG - chr6_3:20663489-20663508 Msa0944140:intron 45.0%
AGATAAATCGACACCGTGTG+GGG - chr6_3:20663490-20663509 Msa0944140:intron 45.0%
TGCATCTTTGCACCCTACTT+TGG - chr6_3:20659413-20659432 Msa0944140:CDS 45.0%
GACTATAACCTATGAGGCTC+AGG - chr6_3:20663682-20663701 Msa0944140:CDS 45.0%
TGTGTCCACCATTAGTGCTT+TGG - chr6_3:20663733-20663752 Msa0944140:CDS 45.0%
!! CTTAGAGAGTACTCCTCTCA+AGG + chr6_3:20663881-20663900 None:intergenic 45.0%
!! CTTGAGAGGAGTACTCTCTA+AGG - chr6_3:20663879-20663898 Msa0944140:intron 45.0%
TTTGCTTAACCCACTTGGGT+TGG + chr6_3:20663926-20663945 None:intergenic 45.0%
ACTTACCTTATGGCCAATCC+AGG - chr6_3:20664103-20664122 Msa0944140:CDS 45.0%
!! GATGGATTGTTGGAGTATGC+TGG + chr6_3:20664269-20664288 None:intergenic 45.0%
!! GATGGAAGGAGATGGATTGT+TGG + chr6_3:20664279-20664298 None:intergenic 45.0%
AGATCTTCGATGGAAGGAGA+TGG + chr6_3:20664287-20664306 None:intergenic 45.0%
! CTCAAAGCTCTGTGATGATG+AGG + chr6_3:20664411-20664430 None:intergenic 45.0%
CTCCAGGTTCTCTTATCATC+AGG - chr6_3:20664442-20664461 Msa0944140:CDS 45.0%
TCCCTGATGATAAGAGAACC+TGG + chr6_3:20664447-20664466 None:intergenic 45.0%
!! GGGTGGTGATGGTAGTAGTT+CGG - chr6_3:20659265-20659284 Msa0944140:CDS 50.0%
!! GGTGGTGATGGTAGTAGTTC+GGG - chr6_3:20659266-20659285 Msa0944140:CDS 50.0%
GTGGTGCTTGCAAGTTCTTG+AGG - chr6_3:20659372-20659391 Msa0944140:CDS 50.0%
GTGCTTGCAAGTTCTTGAGG+AGG - chr6_3:20659375-20659394 Msa0944140:CDS 50.0%
!! CCCTACTTTGGTACTGACCA+AGG - chr6_3:20659425-20659444 Msa0944140:CDS 50.0%
!! CTTTGGTACTGACCAAGGTG+CGG - chr6_3:20659430-20659449 Msa0944140:CDS 50.0%
TAAGTTTGCGGCTGTGCACA+AGG - chr6_3:20659454-20659473 Msa0944140:CDS 50.0%
TAGCCTAGCTTGAGCCTCAT+AGG + chr6_3:20659558-20659577 None:intergenic 50.0%
GTGGACACACAGCCATAAAC+TGG + chr6_3:20659587-20659606 None:intergenic 50.0%
TTGCTGCAATGCAAGAAGGG+TGG + chr6_3:20659606-20659625 None:intergenic 50.0%
CCTGTTGCTGCAATGCAAGA+AGG + chr6_3:20659610-20659629 None:intergenic 50.0%
CCTTCTTGCATTGCAGCAAC+AGG - chr6_3:20659607-20659626 Msa0944140:intron 50.0%
TACATTATGGCCGATGCAGG+TGG - chr6_3:20659885-20659904 Msa0944140:intron 50.0%
TTGAAACGGCGGCTGATATG+GGG + chr6_3:20659995-20660014 None:intergenic 50.0%
GTTGAAACGGCGGCTGATAT+GGG + chr6_3:20659996-20660015 None:intergenic 50.0%
AGTTGAAACGGCGGCTGATA+TGG + chr6_3:20659997-20660016 None:intergenic 50.0%
ATATCAGCCGCCGTTTCAAC+TGG - chr6_3:20659996-20660015 Msa0944140:CDS 50.0%
TGCTGTACCAGTTGAAACGG+CGG + chr6_3:20660006-20660025 None:intergenic 50.0%
! TTGGAATATGCTGGCTGCAC+AGG + chr6_3:20660045-20660064 None:intergenic 50.0%
GGTGGAAGCAGATGAGTTGT+TGG + chr6_3:20660064-20660083 None:intergenic 50.0%
CCATTGTGAGGCCAAAACCA+GGG + chr6_3:20660116-20660135 None:intergenic 50.0%
TCCATTGTGAGGCCAAAACC+AGG + chr6_3:20660117-20660136 None:intergenic 50.0%
!! GGCTCTAAGCTCTGTGATGA+AGG + chr6_3:20660147-20660166 None:intergenic 50.0%
! TGATAACCAAGGAAGCACGG+AGG + chr6_3:20661048-20661067 None:intergenic 50.0%
GTCAAAGCAAAAACGCAGCG+CGG - chr6_3:20661225-20661244 Msa0944140:intron 50.0%
CGCCACCGAGTGTAGTATAT+TGG + chr6_3:20661603-20661622 None:intergenic 50.0%
!! GTGACGCGGCTCCTTTATTT+TGG - chr6_3:20661625-20661644 Msa0944140:intron 50.0%
CCGTGTTTGACAACAGAGGA+AGG - chr6_3:20661679-20661698 Msa0944140:intron 50.0%
GGTATGGTAACCCGATCAGA+AGG + chr6_3:20661983-20662002 None:intergenic 50.0%
TCTCCTCCAGAGCAGAAACT+AGG + chr6_3:20662698-20662717 None:intergenic 50.0%
TTGCCCGATTACGTCAAAGC+TGG - chr6_3:20662832-20662851 Msa0944140:intron 50.0%
GCTCCTGTATTTGCAGGGTT+CGG + chr6_3:20663040-20663059 None:intergenic 50.0%
!! AGGGAGTGTTGAATAGCACG+TGG + chr6_3:20663227-20663246 None:intergenic 50.0%
GGTTGGCAACGTGAATGATG+TGG + chr6_3:20663295-20663314 None:intergenic 50.0%
TTTGTGAGGGGAGTGAACGT+TGG + chr6_3:20663330-20663349 None:intergenic 50.0%
GCAGATAAATCGACACCGTG+TGG - chr6_3:20663488-20663507 Msa0944140:intron 50.0%
! TAGCTTTGCAGCTGTGCACA+AGG - chr6_3:20663589-20663608 Msa0944140:CDS 50.0%
TACCTTATGGCCAATCCAGG+TGG - chr6_3:20664106-20664125 Msa0944140:CDS 50.0%
! GTAGCATTTGCTGATGCTGC+AGG + chr6_3:20664217-20664236 None:intergenic 50.0%
!! TGTTGGTGGCAGCAAGAACA+GGG + chr6_3:20664331-20664350 None:intergenic 50.0%
!! TTGTTGGTGGCAGCAAGAAC+AGG + chr6_3:20664332-20664351 None:intergenic 50.0%
GAACCGGTTATAACGCCGTG+TGG - chr6_3:20659353-20659372 Msa0944140:CDS 55.0%
GCACCACACGGCGTTATAAC+CGG + chr6_3:20659359-20659378 None:intergenic 55.0%
CCAAGGTGCGGCTAAGTTTG+CGG - chr6_3:20659442-20659461 Msa0944140:CDS 55.0%
TGCATAGCTGCCACCTGCAT+CGG + chr6_3:20659898-20659917 None:intergenic 55.0%
!!! CCCTGGTTTTGGCCTCACAA+TGG - chr6_3:20660113-20660132 Msa0944140:CDS 55.0%
!! AAGGTGCCGTCTCCATTGTG+AGG + chr6_3:20660128-20660147 None:intergenic 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr6_3:20661251-20661270 Msa0944140:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG + chr6_3:20661260-20661279 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG + chr6_3:20661261-20661280 None:intergenic 55.0%
AAGTGCTTGCAAGCCCCACA+CGG + chr6_3:20663506-20663525 None:intergenic 55.0%
GCAGCTGTGCACAAGGTCTT+TGG - chr6_3:20663596-20663615 Msa0944140:CDS 55.0%
TAACCTATGAGGCTCAGGCC+AGG - chr6_3:20663687-20663706 Msa0944140:intron 55.0%
!! TGGCCTGGTGGTGTTGGTTT+GGG + chr6_3:20663906-20663925 None:intergenic 55.0%
!! TTGGCCTGGTGGTGTTGGTT+TGG + chr6_3:20663907-20663926 None:intergenic 55.0%
!! TTAACCCACTTGGGTTGGCC+TGG + chr6_3:20663921-20663940 None:intergenic 55.0%
!! CTCCACCTGGATTGGCCATA+AGG + chr6_3:20664111-20664130 None:intergenic 55.0%
CTTATGGCCAATCCAGGTGG+AGG - chr6_3:20664109-20664128 Msa0944140:CDS 55.0%
TTGCTGATGCTGCAGGTCTG+TGG + chr6_3:20664210-20664229 None:intergenic 55.0%
GCTGAGTCACAGGGTGGTGA+TGG - chr6_3:20659254-20659273 Msa0944140:CDS 60.0%
CCGCAAACTTAGCCGCACCT+TGG + chr6_3:20659445-20659464 None:intergenic 60.0%
! GCGGCTGTGCACAAGGTGTT+TGG - chr6_3:20659461-20659480 Msa0944140:CDS 60.0%
! GCGATGGCTAGCCGGAATGT+TGG + chr6_3:20659513-20659532 None:intergenic 60.0%
TTGCAGCAGCTTCCTGGCGA+TGG + chr6_3:20659529-20659548 None:intergenic 60.0%
GGTGGCAGCTATGCAAGCAG+AGG - chr6_3:20659903-20659922 Msa0944140:intron 60.0%
CTGTCTCCTCCGTGCTTCCT+TGG - chr6_3:20661039-20661058 Msa0944140:intron 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr6_3:20661256-20661275 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr6_3:20661259-20661278 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr6_3:20661256-20661275 Msa0944140:intron 60.0%
AATTGACGCGGCGCGGTATG+CGG - chr6_3:20661263-20661282 Msa0944140:intron 60.0%
GCGGGCGCTATTACATGACG+CGG - chr6_3:20661293-20661312 Msa0944140:intron 60.0%
GCGCGGAGCGGCCAAAATAA+AGG + chr6_3:20661639-20661658 None:intergenic 60.0%
TTGTCAAACACGGCCGCTCC+CGG + chr6_3:20661672-20661691 None:intergenic 60.0%
GCGGCCGTGTTTGACAACAG+AGG - chr6_3:20661675-20661694 Msa0944140:intron 60.0%
GATCCTGGCCTGAGCCTCAT+AGG + chr6_3:20663693-20663712 None:intergenic 60.0%
GGTCCCAAACCAACACCACC+AGG - chr6_3:20663900-20663919 Msa0944140:intron 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG + chr6_3:20663912-20663931 None:intergenic 60.0%
ACCACCAGGCCAACCCAAGT+GGG - chr6_3:20663914-20663933 Msa0944140:intron 60.0%
TGCAGTGCCTCCACCTGGAT+TGG + chr6_3:20664119-20664138 None:intergenic 60.0%
! CATTCCGGCTAGCCATCGCC+AGG - chr6_3:20659514-20659533 Msa0944140:CDS 65.0%
GCTTCCTGGCGATGGCTAGC+CGG + chr6_3:20659521-20659540 None:intergenic 65.0%
AGCAAAAACGCAGCGCGGCG+CGG - chr6_3:20661230-20661249 Msa0944140:intron 65.0%
ATTGACGCGGCGCGGTATGC+GGG - chr6_3:20661264-20661283 Msa0944140:intron 65.0%
! CACTCGGTGGCGTTGTGACG+CGG - chr6_3:20661611-20661630 Msa0944140:intron 65.0%
CACCACCAGGCCAACCCAAG+TGG - chr6_3:20663913-20663932 Msa0944140:intron 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr6_3:20663918-20663937 None:intergenic 65.0%
CTGCTTGCAGTGCCTCCACC+TGG + chr6_3:20664124-20664143 None:intergenic 65.0%
!! GGTGGAGGCACTGCAAGCAG+AGG - chr6_3:20664124-20664143 Msa0944140:CDS 65.0%
! CGCGGTATGCGGGCGCGACG+CGG - chr6_3:20661274-20661293 Msa0944140:intron 80.0%
! GCGGTATGCGGGCGCGACGC+GGG - chr6_3:20661275-20661294 Msa0944140:intron 80.0%
! GGCGCTATCGCGGCGCGGAG+CGG + chr6_3:20661651-20661670 None:intergenic 80.0%
! GCTCCGCGCCGCGATAGCGC+CGG - chr6_3:20661650-20661669 Msa0944140:intron 80.0%
! CTCCGCGCCGCGATAGCGCC+GGG - chr6_3:20661651-20661670 Msa0944140:intron 80.0%
! CTCCCGGCGCTATCGCGGCG+CGG + chr6_3:20661656-20661675 None:intergenic 80.0%
!! CGCCGCGATAGCGCCGGGAG+CGG - chr6_3:20661656-20661675 Msa0944140:intron 80.0%
! GGCCGCTCCCGGCGCTATCG+CGG + chr6_3:20661661-20661680 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 20659251 20664475 20659251 ID=Msa0944140;Name=Msa0944140
chr6_3 mRNA 20659251 20664475 20659251 ID=Msa0944140-mRNA-1;Parent=Msa0944140;Name=Msa0944140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0.2|0.16|6|0|413
chr6_3 exon 20664260 20664475 20664260 ID=Msa0944140-mRNA-1:exon:6165;Parent=Msa0944140-mRNA-1
chr6_3 exon 20664098 20664250 20664098 ID=Msa0944140-mRNA-1:exon:6164;Parent=Msa0944140-mRNA-1
chr6_3 exon 20663709 20663822 20663709 ID=Msa0944140-mRNA-1:exon:6163;Parent=Msa0944140-mRNA-1
chr6_3 exon 20663537 20663702 20663537 ID=Msa0944140-mRNA-1:exon:6162;Parent=Msa0944140-mRNA-1
chr6_3 exon 20659993 20660234 20659993 ID=Msa0944140-mRNA-1:exon:6161;Parent=Msa0944140-mRNA-1
chr6_3 exon 20659251 20659601 20659251 ID=Msa0944140-mRNA-1:exon:6160;Parent=Msa0944140-mRNA-1
chr6_3 CDS 20664260 20664475 20664260 ID=Msa0944140-mRNA-1:cds;Parent=Msa0944140-mRNA-1
chr6_3 CDS 20664098 20664250 20664098 ID=Msa0944140-mRNA-1:cds;Parent=Msa0944140-mRNA-1
chr6_3 CDS 20663709 20663822 20663709 ID=Msa0944140-mRNA-1:cds;Parent=Msa0944140-mRNA-1
chr6_3 CDS 20663537 20663702 20663537 ID=Msa0944140-mRNA-1:cds;Parent=Msa0944140-mRNA-1
chr6_3 CDS 20659993 20660234 20659993 ID=Msa0944140-mRNA-1:cds;Parent=Msa0944140-mRNA-1
chr6_3 CDS 20659251 20659601 20659251 ID=Msa0944140-mRNA-1:cds;Parent=Msa0944140-mRNA-1
Gene Sequence

>Msa0944140

ATGGCTGAGTCACAGGGTGGTGATGGTAGTAGTTCGGGAAACAGGCGCAATAAAAGCGCAAATGCTGCTGCAAAGCGTGCAATAGCAAGAGCAACACAAGACGAACCGGTTATAACGCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTAGTAGTGGATGCATCTTTGCACCCTACTTTGGTACTGACCAAGGTGCGGCTAAGTTTGCGGCTGTGTTTGGTGCTAGCAATGTGTCGAAGCACTTGTCCAACATTCCGGCTAGCCATCGCCAGGAAGCTGCTGCAACAATTTCCTATGAGGCTCAAGCTAGGCTAGCTGATCCAGTTTATGGCTGTGTGTCCACCCTTCTTGCATTGCAGCAACAGGTGGCAGCTATGCAAGCAGAGGTCTCGATGATGCAAACTCAATTGATGAATAGGAGGCTTGCATATGCAAATGCAAGTACTCTTCAAGCCCCATATCAGCCGCCGTTTCAACTGCAACCAAACTTCAATGTACCTGTGCAGCCAGCATATTCCAACAACTCATCTGCTTCCACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGCCTCACAATGGAGACGGCACCTTCATCACAGAGCTTAGAGCCTTTTCAAAACTCCAGGATGTCTCATAAATCGACACCGTGTGGGGCTTGCAAGCACTTGAAGAAGAAGTGTATTAATGGATGCATCTTTGCACCCTACTTTGGTAAAAAACAAAATGAAGCTAGCTTTGCAGCTGTGCACAAGGTCTTTGGAGCTGCCAATGTGTTGAAGATCTTGTCCAAAATTCCAACTATTCACCGCAAAAAAGCAATGAAGACTATAACCTATGAGGCTCAGGCCAGGATCGCTGATCCAATTAATGGTTGTGTGGAGGCACTGCAAGCAGAGGTCTCAATGATGAAAGCTCAGCAGATGAACAACGGATTTGCATATGCGAATGCTCTTCAAACCACAGACCTGCAGCATCAGCAAATGCTACAGCAACCAAACTTCAATGTATCTGTGCAACCAGCATACTCCAACAATCCATCTCCTTCCATCGAAGATCTCATGAACATGAACAACTTCAACCCTGTTCTTGCTGCCACCAACAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGATACTACAATGGAGACAGCACCCTCATCATCACAGAGCTTTGAGCCTTTTCAAAACTCCAGGTTCTCTTATCATCAGGGAGACAATTAA
Protein sequence

>Msa0944140

MAESQGGDGSSSGNRRNKSANAAAKRAIARATQDEPVITPCGACKFLRRKCSSGCIFAPYFGTDQGAAKFAAVFGASNVSKHLSNIPASHRQEAAATISYEAQARLADPVYGCVSTLLALQQQVAAMQAEVSMMQTQLMNRRLAYANASTLQAPYQPPFQLQPNFNVPVQPAYSNNSSASTTNLMNMNNFNPGFGLTMETAPSSQSLEPFQNSRMSHKSTPCGACKHLKKKCINGCIFAPYFGKKQNEASFAAVHKVFGAANVLKILSKIPTIHRKKAMKTITYEAQARIADPINGCVEALQAEVSMMKAQQMNNGFAYANALQTTDLQHQQMLQQPNFNVSVQPAYSNNPSPSIEDLMNMNNFNPVLAATNNLMNMNNFNPGFDTTMETAPSSSQSFEPFQNSRFSYHQGDN*