AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0980510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980510 MtrunA17_Chr6g0460951 95.946 222 4 2 1 217 1 222 2.62e-150 425
Msa0980510 MtrunA17_Chr6g0460951 58.252 206 57 4 220 413 39 227 4.86e-69 218
Msa0980510 MtrunA17_Chr6g0460931 93.519 108 5 2 307 413 1 107 2.50e-54 176
Msa0980510 MtrunA17_Chr6g0460931 50.000 102 33 3 133 217 2 102 4.84e-14 68.2
Msa0980510 MtrunA17_Chr6g0460941 78.652 89 19 0 215 303 1 89 3.25e-43 146
Msa0980510 MtrunA17_Chr6g0460941 64.773 88 28 1 40 124 7 94 8.46e-35 124
Msa0980510 MtrunA17_Chr1g0184271 45.745 188 84 5 40 215 12 193 2.21e-42 149
Msa0980510 MtrunA17_Chr1g0184271 55.319 94 39 1 221 311 12 105 2.30e-30 117
Msa0980510 MtrunA17_Chr7g0261031 62.963 108 37 1 39 143 7 114 2.12e-40 143
Msa0980510 MtrunA17_Chr7g0261031 55.000 100 42 1 215 311 2 101 1.49e-31 119
Msa0980510 MtrunA17_Chr7g0260971 66.019 103 32 1 39 138 13 115 2.24e-40 143
Msa0980510 MtrunA17_Chr7g0260971 55.238 105 44 1 212 313 5 109 1.71e-30 117
Msa0980510 MtrunA17_Chr8g0351701 63.725 102 34 1 40 138 23 124 3.87e-39 140
Msa0980510 MtrunA17_Chr8g0351701 54.455 101 36 1 221 311 23 123 5.12e-30 115
Msa0980510 MtrunA17_Chr5g0435641 51.261 119 55 1 39 154 6 124 2.12e-38 137
Msa0980510 MtrunA17_Chr5g0435641 48.000 100 49 1 215 311 1 100 5.06e-26 103
Msa0980510 MtrunA17_Chr1g0184281 62.376 101 35 1 40 137 15 115 5.64e-38 136
Msa0980510 MtrunA17_Chr1g0184281 55.208 96 40 1 221 313 15 110 1.58e-28 111
Msa0980510 MtrunA17_Chr7g0245871 59.804 102 38 1 40 138 27 128 1.27e-37 136
Msa0980510 MtrunA17_Chr7g0245871 49.057 106 44 1 221 316 27 132 2.22e-28 112
Msa0980510 MtrunA17_Chr8g0351721 57.983 119 46 2 40 154 18 136 1.59e-37 135
Msa0980510 MtrunA17_Chr8g0351721 54.255 94 40 1 221 311 18 111 3.64e-28 110
Msa0980510 MtrunA17_Chr7g0245861 64.444 90 27 3 40 124 12 101 1.85e-29 111
Msa0980510 MtrunA17_Chr7g0245861 57.647 85 34 2 221 303 12 96 6.20e-25 99.4
Msa0980510 MtrunA17_Chr3g0114061 36.875 160 82 4 39 191 7 154 3.86e-29 111
Msa0980510 MtrunA17_Chr3g0114061 37.324 142 81 3 219 354 6 145 2.40e-23 95.5
Msa0980510 MtrunA17_Chr4g0043421 36.943 157 83 4 39 188 14 161 4.37e-29 111
Msa0980510 MtrunA17_Chr4g0043421 35.616 146 93 1 219 364 13 157 8.53e-24 97.4
Msa0980510 MtrunA17_Chr4g0058651 49.074 108 53 1 39 144 10 117 6.82e-29 111
Msa0980510 MtrunA17_Chr4g0058651 46.316 95 47 2 220 311 10 103 3.65e-24 99.0
Msa0980510 MtrunA17_Chr2g0311601 44.954 109 56 2 38 143 11 118 1.42e-28 109
Msa0980510 MtrunA17_Chr2g0311601 45.263 95 48 2 220 311 12 105 1.34e-22 93.6
Msa0980510 MtrunA17_Chr3g0129071 48.214 112 54 2 38 146 45 155 5.38e-28 110
Msa0980510 MtrunA17_Chr3g0129071 40.196 102 50 2 220 311 46 146 3.36e-20 89.0
Msa0980510 MtrunA17_Chr3g0117121 48.624 109 52 2 39 145 9 115 9.38e-28 108
Msa0980510 MtrunA17_Chr3g0117121 46.465 99 49 2 216 311 5 102 3.43e-24 99.0
Msa0980510 MtrunA17_Chr3g0106101 47.115 104 51 2 39 139 6 108 1.01e-27 108
Msa0980510 MtrunA17_Chr3g0106101 44.000 100 52 2 215 311 1 99 9.67e-24 97.4
Msa0980510 MtrunA17_Chr6g0449641 45.690 116 57 3 39 151 8 120 1.04e-27 107
Msa0980510 MtrunA17_Chr6g0449641 44.898 98 52 2 216 312 4 100 1.28e-22 93.2
Msa0980510 MtrunA17_Chr7g0227511 49.038 104 49 2 39 139 10 112 1.48e-27 107
Msa0980510 MtrunA17_Chr7g0227511 44.118 102 53 2 213 311 3 103 3.71e-23 95.5
Msa0980510 MtrunA17_Chr5g0437401 47.000 100 51 1 41 138 12 111 1.64e-27 107
Msa0980510 MtrunA17_Chr5g0437401 50.602 83 40 1 219 301 9 90 5.62e-23 95.1
Msa0980510 MtrunA17_Chr5g0438091 46.429 112 56 2 39 147 38 148 4.74e-27 107
Msa0980510 MtrunA17_Chr5g0438091 34.752 141 80 3 199 333 11 145 2.60e-21 91.3
Msa0980510 MtrunA17_Chr5g0402611 50.000 102 49 1 39 138 7 108 1.75e-26 108
Msa0980510 MtrunA17_Chr5g0402611 40.541 148 75 5 216 352 3 148 2.82e-23 99.4
Msa0980510 MtrunA17_Chr5g0437571 45.631 103 54 1 39 139 5 107 2.47e-26 103
Msa0980510 MtrunA17_Chr5g0437571 39.669 121 71 2 220 340 5 123 6.71e-24 97.4
Msa0980510 MtrunA17_Chr4g0030001 42.222 135 66 5 37 161 21 153 2.54e-26 104
Msa0980510 MtrunA17_Chr4g0030001 37.037 135 66 3 198 314 1 134 1.47e-21 91.7
Msa0980510 MtrunA17_Chr3g0115431 47.059 102 52 1 39 138 8 109 1.99e-25 103
Msa0980510 MtrunA17_Chr3g0115431 51.250 80 38 1 219 298 7 85 1.14e-21 92.8
Msa0980510 MtrunA17_Chr6g0449651 43.103 116 60 3 39 151 66 178 4.42e-25 101
Msa0980510 MtrunA17_Chr6g0449651 43.158 95 49 2 217 311 63 152 3.48e-20 88.2
Msa0980510 MtrunA17_Chr3g0113891 44.211 95 51 1 41 133 15 109 8.25e-25 100
Msa0980510 MtrunA17_Chr3g0113891 42.708 96 50 2 219 314 12 102 2.55e-21 90.9
Msa0980510 MtrunA17_Chr3g0097221 43.966 116 60 2 39 152 6 118 1.60e-24 102
Msa0980510 MtrunA17_Chr3g0097221 50.000 84 41 1 215 298 1 83 2.29e-22 96.3
Msa0980510 MtrunA17_Chr1g0200201 43.363 113 62 2 41 151 73 185 5.76e-24 99.4
Msa0980510 MtrunA17_Chr1g0200201 41.935 93 50 2 222 311 73 164 3.14e-19 86.3
Msa0980510 MtrunA17_Chr5g0432451 50.000 108 50 2 38 142 41 147 1.78e-23 98.2
Msa0980510 MtrunA17_Chr5g0432451 47.561 82 42 1 220 301 42 122 4.29e-20 88.6
Msa0980510 MtrunA17_Chr5g0444351 42.857 105 58 1 41 143 6 110 1.14e-22 93.2
Msa0980510 MtrunA17_Chr5g0444351 37.903 124 67 3 222 341 6 123 2.17e-18 81.6
Msa0980510 MtrunA17_Chr8g0374601 38.235 136 76 3 37 168 23 154 5.71e-22 95.1
Msa0980510 MtrunA17_Chr8g0374601 45.455 77 41 1 221 297 26 101 1.91e-17 82.0
Msa0980510 MtrunA17_Chr8g0353981 54.878 82 33 2 39 117 6 86 2.08e-21 92.4
Msa0980510 MtrunA17_Chr8g0353981 43.678 87 48 1 215 301 1 86 4.05e-19 85.9
Msa0980510 MtrunA17_Chr7g0225111 38.532 109 65 1 37 143 2 110 4.04e-21 88.2
Msa0980510 MtrunA17_Chr7g0225111 40.260 77 45 1 222 298 6 81 1.33e-15 72.8
Msa0980510 MtrunA17_Chr8g0374591 38.318 107 64 1 34 138 2 108 1.22e-19 84.3
Msa0980510 MtrunA17_Chr8g0374591 48.052 77 39 1 221 297 8 83 3.11e-19 83.2
Msa0980510 MtrunA17_Chr8g0374581 39.815 108 62 2 35 139 3 110 3.22e-17 80.5
Msa0980510 MtrunA17_Chr8g0374581 40.506 79 45 2 221 298 8 85 2.98e-12 65.9
Msa0980510 MtrunA17_Chr4g0040831 45.333 75 40 1 222 296 16 89 1.07e-15 75.5
Msa0980510 MtrunA17_Chr4g0040831 33.333 105 63 3 41 139 16 119 2.09e-12 65.9
Msa0980510 MtrunA17_Chr4g0059901 38.000 100 60 1 41 138 11 110 1.19e-15 76.6
Msa0980510 MtrunA17_Chr4g0059901 38.710 93 53 2 222 311 11 102 3.30e-15 75.5
Msa0980510 MtrunA17_Chr2g0330201 35.000 100 63 1 41 138 20 119 1.22e-15 77.0
Msa0980510 MtrunA17_Chr2g0330201 31.183 93 60 2 222 311 20 111 4.72e-13 69.3
Msa0980510 MtrunA17_Chr8g0342351 33.043 115 59 3 222 333 13 112 4.83e-15 74.7
Msa0980510 MtrunA17_Chr8g0342351 36.000 100 62 1 41 138 13 112 6.18e-15 74.3
Msa0980510 MtrunA17_Chr6g0452671 32.632 95 63 1 219 313 9 102 1.45e-14 72.0
Msa0980510 MtrunA17_Chr6g0452671 34.000 100 64 1 41 138 12 111 1.62e-13 69.3
Msa0980510 MtrunA17_Chr4g0046201 40.244 82 48 1 220 301 5 85 9.29e-14 71.2
Msa0980510 MtrunA17_Chr6g0452661 33.051 118 70 4 222 333 10 124 1.24e-13 70.5
Msa0980510 MtrunA17_Chr6g0452661 32.727 110 64 4 37 138 3 110 3.65e-12 66.2
Msa0980510 MtrunA17_Chr6g0452691 26.404 178 107 6 222 394 10 168 2.02e-13 68.6
Msa0980510 MtrunA17_Chr6g0452691 37.255 102 59 3 41 138 10 110 5.86e-13 67.0
Msa0980510 MtrunA17_Chr4g0055441 37.079 89 54 2 222 309 3 90 7.45e-13 66.2
Msa0980510 MtrunA17_Chr4g0055441 41.250 80 44 2 41 117 3 82 2.42e-12 64.7
Msa0980510 MtrunA17_Chr2g0326051 36.000 100 56 2 83 176 5 102 6.98e-12 62.4
Msa0980510 MtrunA17_Chr5g0439111 29.605 152 92 5 222 359 10 160 9.74e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980510 AT3G03760.1 67.347 147 42 2 39 182 50 193 3.60e-55 184
Msa0980510 AT3G03760.1 53.571 112 42 1 220 321 50 161 2.73e-35 131
Msa0980510 AT2G42430.1 49.438 178 56 5 39 182 14 191 5.85e-42 148
Msa0980510 AT2G42430.1 50.000 116 53 2 220 330 14 129 2.02e-30 117
Msa0980510 AT3G58190.1 60.169 118 43 2 40 154 11 127 2.19e-41 146
Msa0980510 AT3G58190.1 52.475 101 38 1 221 311 11 111 1.61e-29 114
Msa0980510 AT2G42440.1 56.881 109 44 1 39 144 6 114 4.04e-37 135
Msa0980510 AT2G42440.1 50.000 100 47 1 215 311 1 100 9.33e-29 113
Msa0980510 AT2G45420.1 62.500 104 36 1 43 143 40 143 8.84e-37 135
Msa0980510 AT2G45420.1 57.143 98 32 1 224 311 40 137 1.83e-28 112
Msa0980510 AT5G06080.1 50.806 124 56 2 39 159 6 127 1.23e-36 132
Msa0980510 AT5G06080.1 43.590 117 54 2 215 321 1 115 4.09e-25 101
Msa0980510 AT4G00220.1 59.615 104 39 1 43 143 20 123 2.11e-36 133
Msa0980510 AT4G00220.1 42.949 156 74 5 224 371 20 168 2.14e-26 106
Msa0980510 AT2G31310.1 54.717 106 45 1 39 141 6 111 2.78e-36 131
Msa0980510 AT2G31310.1 48.000 100 49 1 215 311 1 100 5.53e-29 112
Msa0980510 AT4G00210.1 60.784 102 37 1 40 138 11 112 6.72e-36 131
Msa0980510 AT4G00210.1 46.281 121 53 3 221 338 11 122 3.60e-26 105
Msa0980510 AT2G45410.1 48.299 147 57 5 43 184 19 151 7.38e-34 125
Msa0980510 AT2G45410.1 43.182 132 71 2 224 352 19 149 1.47e-26 105
Msa0980510 AT3G27650.1 50.476 105 48 2 39 140 38 141 7.10e-29 110
Msa0980510 AT3G27650.1 45.882 85 45 1 217 301 35 118 1.65e-21 90.9
Msa0980510 AT1G07900.1 44.538 119 60 3 37 151 30 146 5.32e-28 109
Msa0980510 AT1G07900.1 33.548 155 85 4 220 363 32 179 1.90e-23 97.4
Msa0980510 AT2G30340.1 43.939 132 61 4 38 166 50 171 5.73e-28 111
Msa0980510 AT2G30340.1 38.333 120 61 3 220 329 51 167 6.57e-20 89.4
Msa0980510 AT2G30340.2 43.939 132 61 4 38 166 51 172 5.79e-28 111
Msa0980510 AT2G30340.2 38.333 120 61 3 220 329 52 168 8.68e-20 89.0
Msa0980510 AT5G63090.4 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0980510 AT5G63090.4 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0980510 AT5G63090.3 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0980510 AT5G63090.3 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0980510 AT5G63090.2 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0980510 AT5G63090.2 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0980510 AT5G63090.1 40.764 157 78 5 39 185 10 161 1.55e-27 108
Msa0980510 AT5G63090.1 46.316 95 47 2 220 311 10 103 1.44e-23 97.4
Msa0980510 AT3G11090.1 45.545 101 53 1 41 139 12 112 3.86e-27 106
Msa0980510 AT3G11090.1 38.261 115 70 1 219 333 9 122 9.19e-23 94.7
Msa0980510 AT2G28500.1 46.847 111 53 3 37 143 52 160 6.35e-27 107
Msa0980510 AT2G28500.1 43.158 95 50 2 220 311 54 147 4.36e-21 91.7
Msa0980510 AT2G30130.1 44.355 124 63 3 36 156 4 124 7.98e-27 106
Msa0980510 AT2G30130.1 46.875 96 47 2 219 311 6 100 1.02e-22 95.5
Msa0980510 AT1G16530.1 44.954 109 55 3 38 142 12 119 9.68e-26 102
Msa0980510 AT1G16530.1 36.842 133 81 3 211 342 4 134 1.33e-22 94.4
Msa0980510 AT5G66870.1 41.096 146 73 4 39 181 6 141 9.73e-26 106
Msa0980510 AT5G66870.1 40.945 127 70 3 215 339 1 124 2.20e-23 100
Msa0980510 AT1G31320.1 45.794 107 56 1 39 143 12 118 6.67e-25 100
Msa0980510 AT1G31320.1 37.209 129 74 2 211 339 3 124 9.66e-22 92.0
Msa0980510 AT2G23660.2 43.269 104 57 1 39 140 4 107 2.89e-23 99.8
Msa0980510 AT2G23660.2 53.750 80 36 1 219 298 3 81 1.64e-22 97.4
Msa0980510 AT2G23660.3 43.269 104 57 1 39 140 4 107 2.89e-23 99.8
Msa0980510 AT2G23660.3 53.750 80 36 1 219 298 3 81 1.64e-22 97.4
Msa0980510 AT2G23660.1 43.269 104 57 1 39 140 4 107 2.89e-23 99.8
Msa0980510 AT2G23660.1 53.750 80 36 1 219 298 3 81 1.64e-22 97.4
Msa0980510 AT1G65620.1 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0980510 AT1G65620.1 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0980510 AT1G65620.4 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0980510 AT1G65620.4 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0980510 AT1G65620.3 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0980510 AT1G65620.3 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0980510 AT1G65620.5 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0980510 AT1G65620.5 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0980510 AT1G65620.2 50.485 103 47 2 39 138 8 109 5.93e-23 96.3
Msa0980510 AT1G65620.2 46.512 86 45 1 216 301 4 88 7.00e-20 87.4
Msa0980510 AT3G26660.1 43.519 108 50 3 41 138 6 112 6.73e-23 93.6
Msa0980510 AT3G26660.1 41.558 77 44 1 222 298 6 81 1.61e-18 81.6
Msa0980510 AT2G40470.2 48.718 117 56 2 38 151 18 133 7.40e-23 95.9
Msa0980510 AT2G40470.2 46.341 82 43 1 220 301 19 99 1.29e-19 87.0
Msa0980510 AT2G40470.1 48.718 117 56 2 38 151 43 158 7.68e-23 96.7
Msa0980510 AT2G40470.1 46.341 82 43 1 220 301 44 124 2.25e-19 86.7
Msa0980510 AT3G26620.1 43.519 108 50 3 41 138 6 112 9.02e-23 93.2
Msa0980510 AT3G26620.1 41.558 77 44 1 222 298 6 81 2.78e-18 80.9
Msa0980510 AT3G50510.1 42.708 96 54 1 214 309 5 99 7.05e-22 93.2
Msa0980510 AT3G50510.1 35.185 108 68 1 33 138 5 112 1.48e-18 84.0
Msa0980510 AT3G50510.2 42.708 96 54 1 214 309 5 99 7.05e-22 93.2
Msa0980510 AT3G50510.2 35.185 108 68 1 33 138 5 112 1.48e-18 84.0
Msa0980510 AT5G35900.1 47.500 80 41 1 219 298 3 81 3.38e-16 77.4
Msa0980510 AT5G35900.1 32.353 102 67 1 39 138 4 105 2.63e-13 68.9
Msa0980510 AT1G72980.1 40.000 110 61 3 39 144 12 120 3.64e-16 77.4
Msa0980510 AT1G72980.1 35.922 103 55 2 219 311 11 112 6.75e-15 73.9
Msa0980510 AT3G13850.1 36.000 100 62 1 41 138 37 136 2.01e-15 76.3
Msa0980510 AT3G13850.1 29.365 126 82 3 222 344 37 158 2.14e-14 73.6
Msa0980510 AT1G06280.1 44.000 75 41 1 222 296 25 98 2.00e-14 72.4
Msa0980510 AT3G47870.1 35.714 84 53 1 219 302 34 116 3.61e-13 70.5
Msa0980510 AT3G47870.1 29.808 104 71 1 41 142 37 140 5.14e-11 63.9

Find 101 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGAAACGGCGGCTGATA+TGG 0.243600 6_4:-18758389 None:intergenic
GCAGCTGTGCACAAGGTCTT+TGG 0.255749 6_4:+18761991 Msa0980510:CDS
AACAACTTCAACCCTGGTTT+TGG 0.268597 6_4:+18758497 Msa0980510:CDS
GTGGACACACAACCATTAAT+TGG 0.284098 6_4:-18762114 None:intergenic
TTGAAGAAGAAGTGTATTAA+TGG 0.285388 6_4:+18761919 Msa0980510:CDS
AGGCTAGCTGATCCAGTTTA+TGG 0.286193 6_4:+18757967 Msa0980510:CDS
CCTTCTTGCTTTGCAGCAAC+AGG 0.312094 6_4:+18758002 Msa0980510:CDS
AAATTGTTGCAGCAGCTTCC+TGG 0.332792 6_4:-18757927 None:intergenic
TTGTTGGTGGCAGCAAGAAC+AGG 0.345361 6_4:-18762724 None:intergenic
GCGGTGAATAGTTGGAATTT+TGG 0.347398 6_4:-18762040 None:intergenic
AGGATCGCTGATCCAATTAA+TGG 0.374552 6_4:+18762102 Msa0980510:CDS
GACTGTGATGGCTGAGTCAC+AGG 0.379048 6_4:+18757639 None:intergenic
CTCCAGGTTCTCTTATCATC+AGG 0.387227 6_4:+18762837 Msa0980510:CDS
GGTGGTGATGGTAGTAGTTC+GGG 0.392136 6_4:+18757661 Msa0980510:CDS
GTGGACACACAGCCATAAAC+TGG 0.395590 6_4:-18757979 None:intergenic
GAAGCACTTGTCCAACATTC+CGG 0.397219 6_4:+18757894 Msa0980510:CDS
TGCATCTTTGCACCCTACTT+TGG 0.399115 6_4:+18757808 Msa0980510:CDS
TGAAGTTGTTCATGTTCATA+AGG 0.399289 6_4:-18758484 None:intergenic
TGAAGTTGTTCATGTTCATA+AGG 0.399289 6_4:-18762747 None:intergenic
TGCATCTTTGCACCCTACTT+TGG 0.409327 6_4:+18761943 Msa0980510:CDS
TAGCCTAGCTTGAGCCTCAT+AGG 0.409914 6_4:-18757950 None:intergenic
ATGGTAGTAGTTCGGGAAAC+AGG 0.414773 6_4:+18757668 Msa0980510:CDS
TGCACAGGTACATTGAAGTT+TGG 0.417807 6_4:-18758422 None:intergenic
GTTGAAACGGCGGCTGATAT+GGG 0.423151 6_4:-18758388 None:intergenic
TGCAAACTCAATTGATGAAT+AGG 0.424003 6_4:+18758330 Msa0980510:CDS
GCGGCTGTGCACAAGGTGTT+TGG 0.424834 6_4:+18757856 Msa0980510:intron
TGCACAGATACATTGAAGTT+TGG 0.428474 6_4:-18762637 None:intergenic
GATCCTGGCCTGAGCCTCAT+AGG 0.432336 6_4:-18762085 None:intergenic
GGGTGGTGATGGTAGTAGTT+CGG 0.433902 6_4:+18757660 Msa0980510:CDS
GCACCACACGGCGTTATAAC+CGG 0.444947 6_4:-18757751 None:intergenic
GTAGCATTTGCTGATGCTGC+AGG 0.445401 6_4:-18762609 None:intergenic
GTTCATGTTCATAAGGTTGT+TGG 0.448098 6_4:-18762740 None:intergenic
ATATCAGCCGCCGTTTCAAC+TGG 0.453062 6_4:+18758391 Msa0980510:CDS
GACTATAACCTATGAGGCTC+AGG 0.457119 6_4:+18762077 Msa0980510:CDS
TTGGAATATGCTGGCTGCAC+AGG 0.466534 6_4:-18758437 None:intergenic
ATTAATTGGATCAGCGATCC+TGG 0.479430 6_4:-18762100 None:intergenic
TTGCAGCAGCTTCCTGGCGA+TGG 0.481070 6_4:-18757921 None:intergenic
GGCTCTAAGCTCTGTGATGA+AGG 0.484149 6_4:-18758539 None:intergenic
TTTCTCAAAACGAGACATCC+TGG 0.484547 6_4:-18758573 None:intergenic
GTTGTTCATGTTCATAAGGT+TGG 0.485083 6_4:-18758480 None:intergenic
GCTTCCTGGCGATGGCTAGC+CGG 0.485119 6_4:-18757913 None:intergenic
TTGAGGAGGAAGTGTAGTAG+TGG 0.488789 6_4:+18757784 Msa0980510:CDS
GATGGAAGGAGATGGATTGT+TGG 0.492226 6_4:-18762671 None:intergenic
CCAAGGTGCGGCTAAGTTTG+CGG 0.493536 6_4:+18757837 Msa0980510:CDS
GATGGATTGTTGGAGTATGC+TGG 0.496824 6_4:-18762661 None:intergenic
AAGAGCAACACAAGACGAAC+CGG 0.499358 6_4:+18757732 Msa0980510:CDS
GGTTGCTGTACCAGTTGAAA+CGG 0.507203 6_4:-18758401 None:intergenic
GGTGGAAGCAGATGAGTTGT+TGG 0.513070 6_4:-18758456 None:intergenic
TCCATTGTGAGGCCAAAACC+AGG 0.515508 6_4:-18758509 None:intergenic
TTGCTGATGCTGCAGGTCTG+TGG 0.518208 6_4:-18762602 None:intergenic
CCTGTTGCTGCAAAGCAAGA+AGG 0.518305 6_4:-18758002 None:intergenic
GCGATGGCTAGCCGGAATGT+TGG 0.521327 6_4:-18757905 None:intergenic
AACATGAACAACTTCAACCC+TGG 0.523993 6_4:+18758491 Msa0980510:CDS
AACATGAACAACTTCAACCC+TGG 0.523993 6_4:+18762754 Msa0980510:CDS
CATGTTCATGAGATCTTCGA+TGG 0.526356 6_4:-18762689 None:intergenic
TGCTGCAACAATTTCCTATG+AGG 0.529239 6_4:+18757936 Msa0980510:CDS
GTTCATGTTCATAAGGTTGG+TGG 0.542354 6_4:-18758477 None:intergenic
CTGTTGCTGCAAAGCAAGAA+GGG 0.544374 6_4:-18758001 None:intergenic
CATGTTCATAAGGTTGTTGG+TGG 0.547943 6_4:-18762737 None:intergenic
AATGAAGACTATAACCTATG+AGG 0.550364 6_4:+18762071 Msa0980510:CDS
CAGATAAATCGACACCGTGT+GGG 0.552619 6_4:+18761884 Msa0980510:intron
ACCTTGGTCAGTACCAAAGT+AGG 0.553693 6_4:-18757821 None:intergenic
GCTGAGTCACAGGGTGGTGA+TGG 0.557362 6_4:+18757649 Msa0980510:CDS
TCCATTGTAGTATCAAAACC+AGG 0.562905 6_4:-18762772 None:intergenic
TAACCTATGAGGCTCAGGCC+AGG 0.563627 6_4:+18762082 Msa0980510:CDS
TTCATGAGATCTTCGATGGA+AGG 0.566318 6_4:-18762685 None:intergenic
TAGCTTTGCAGCTGTGCACA+AGG 0.566837 6_4:+18761984 Msa0980510:CDS
AGATCTTCGATGGAAGGAGA+TGG 0.567577 6_4:-18762679 None:intergenic
CATTCCGGCTAGCCATCGCC+AGG 0.568999 6_4:+18757909 Msa0980510:CDS
CTCAAAGCTCTGTGATGATG+AGG 0.569176 6_4:-18762803 None:intergenic
AAACTCAATTGATGAATAGG+AGG 0.570071 6_4:+18758333 Msa0980510:CDS
TCCCTGATGATAAGAGAACC+TGG 0.572844 6_4:-18762839 None:intergenic
CCGCAAACTTAGCCGCACCT+TGG 0.577994 6_4:-18757837 None:intergenic
CATGTTCATAAGGTTGGTGG+TGG 0.580499 6_4:-18758474 None:intergenic
TTTCCTATGAGGCTCAAGCT+AGG 0.591556 6_4:+18757947 Msa0980510:CDS
TCCAGGTTCTCTTATCATCA+GGG 0.596198 6_4:+18762838 Msa0980510:CDS
CCTTGGTCAGTACCAAAGTA+GGG 0.599955 6_4:-18757820 None:intergenic
GATGAGTTGTTGGAATATGC+TGG 0.605347 6_4:-18758446 None:intergenic
TTGAAACGGCGGCTGATATG+GGG 0.606891 6_4:-18758387 None:intergenic
GCAGATAAATCGACACCGTG+TGG 0.608982 6_4:+18761883 Msa0980510:intron
CCCTACTTTGGTACTGACCA+AGG 0.613176 6_4:+18757820 Msa0980510:CDS
GGTGGAGGCACTGCAAGCAG+AGG 0.616998 6_4:+18762519 Msa0980510:intron
GGACAAGATCTTCAACACAT+TGG 0.623216 6_4:-18762019 None:intergenic
TGTTGGTGGCAGCAAGAACA+GGG 0.624562 6_4:-18762723 None:intergenic
GGTGGCAGCTATGCAAGCAG+AGG 0.634590 6_4:+18758298 Msa0980510:intron
AGATAAATCGACACCGTGTG+GGG 0.638818 6_4:+18761885 Msa0980510:intron
AAGTGCTTGCAAGCCCCACA+CGG 0.644781 6_4:-18761898 None:intergenic
GTGGTGCTTGCAAGTTCTTG+AGG 0.646814 6_4:+18757767 Msa0980510:CDS
TCAAAGCTCTGTGATGATGA+GGG 0.650661 6_4:-18762802 None:intergenic
CTTTGGTACTGACCAAGGTG+CGG 0.655594 6_4:+18757825 Msa0980510:CDS
AAAGCTCAGCAGATGAACAA+CGG 0.670494 6_4:+18762553 Msa0980510:CDS
TTGCTGCAAAGCAAGAAGGG+TGG 0.671870 6_4:-18757998 None:intergenic
AAGGTGCCGTCTCCATTGTG+AGG 0.672207 6_4:-18758520 None:intergenic
ACTGTGATGGCTGAGTCACA+GGG 0.673977 6_4:+18757640 None:intergenic
GTGCTTGCAAGTTCTTGAGG+AGG 0.680170 6_4:+18757770 Msa0980510:CDS
TGCTGTACCAGTTGAAACGG+CGG 0.689555 6_4:-18758398 None:intergenic
AAGAACTTGCAAGCACCACA+CGG 0.689772 6_4:-18757763 None:intergenic
CCATTGTAGTATCAAAACCA+GGG 0.697403 6_4:-18762771 None:intergenic
CCATTGTGAGGCCAAAACCA+GGG 0.697828 6_4:-18758508 None:intergenic
GAACCGGTTATAACGCCGTG+TGG 0.738703 6_4:+18757748 Msa0980510:CDS
GTGATGGCTGAGTCACAGGG+TGG 0.776633 6_4:+18757643 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATATTATTAATAA+AGG + chr6_4:18759721-18759740 Msa0980510:intron 0.0%
!! TAATGAAAGAAAAAAAAAAA+TGG - chr6_4:18758743-18758762 None:intergenic 10.0%
!! TATATGAAATGTAAAATATA+TGG + chr6_4:18758862-18758881 Msa0980510:intron 10.0%
!! TTGTTTAAGTATATTATTTA+AGG - chr6_4:18759893-18759912 None:intergenic 10.0%
!! AATTAATTATAACTTGAATT+TGG - chr6_4:18761131-18761150 None:intergenic 10.0%
!! TTATTGATGAGAAAATTATT+AGG - chr6_4:18758145-18758164 None:intergenic 15.0%
!!! ATTTTACATTTCATATAATC+CGG - chr6_4:18758859-18758878 None:intergenic 15.0%
!! GAAAAAAATGTATTTAGTAT+TGG + chr6_4:18759758-18759777 Msa0980510:intron 15.0%
!!! AGTATATTGGTTTTAAATTA+TGG - chr6_4:18759985-18760004 None:intergenic 15.0%
!!! TGAAAGGAAATTTATTTTTA+TGG - chr6_4:18760173-18760192 None:intergenic 15.0%
!! AATTTGGATTTAAGTATTTA+TGG - chr6_4:18760227-18760246 None:intergenic 15.0%
!! ATAAATACTTAAATCCAAAT+TGG + chr6_4:18760226-18760245 Msa0980510:intron 15.0%
!! AATATTTAATATGTTGAGTA+GGG - chr6_4:18760348-18760367 None:intergenic 15.0%
!!! TATGTAAAAAATCTCTTTTT+AGG - chr6_4:18760450-18760469 None:intergenic 15.0%
!! AATAAGATATTACTTTGAAT+GGG - chr6_4:18760738-18760757 None:intergenic 15.0%
!! AAATAAGATATTACTTTGAA+TGG - chr6_4:18760739-18760758 None:intergenic 15.0%
!! CAAGTTATAATTAATTATAG+AGG + chr6_4:18761135-18761154 Msa0980510:intron 15.0%
!! TTTGTTGAAAAGAAATTAAA+TGG - chr6_4:18762399-18762418 None:intergenic 15.0%
!! AGAATATTTATCTATCTCTA+TGG + chr6_4:18758031-18758050 Msa0980510:intron 20.0%
!!! CATTCTTTCTTTGAAATTAA+AGG - chr6_4:18758075-18758094 None:intergenic 20.0%
!! ATGATGAATAACTTACATTA+TGG + chr6_4:18758267-18758286 Msa0980510:intron 20.0%
!! AAGTAATATTGTTGAATACT+TGG - chr6_4:18758662-18758681 None:intergenic 20.0%
!! TAAACAACTAAACATAAAGA+TGG + chr6_4:18758958-18758977 Msa0980510:intron 20.0%
!!! ATTTTCGTTTTAATGAGATA+GGG - chr6_4:18759351-18759370 None:intergenic 20.0%
!!! TATTTTCGTTTTAATGAGAT+AGG - chr6_4:18759352-18759371 None:intergenic 20.0%
!! AATAAAGGACTACTAAAATA+TGG + chr6_4:18759736-18759755 Msa0980510:intron 20.0%
!! ATTCATATATTTAATACCCT+TGG + chr6_4:18760134-18760153 Msa0980510:intron 20.0%
!! CAATATTTAATATGTTGAGT+AGG - chr6_4:18760349-18760368 None:intergenic 20.0%
!!! TCAAGAGATTTTACTATAAT+AGG - chr6_4:18760415-18760434 None:intergenic 20.0%
!!! TATAACTTGAATTTGGAATT+TGG - chr6_4:18761124-18761143 None:intergenic 20.0%
!!! GTGATTAAAGTATTAGTTAT+TGG - chr6_4:18761581-18761600 None:intergenic 20.0%
!!! TTTTGTTTTTTACCAAAGTA+GGG - chr6_4:18761958-18761977 None:intergenic 20.0%
!!! ATTTTGTTTTTTACCAAAGT+AGG - chr6_4:18761959-18761978 None:intergenic 20.0%
!! TCAACAAAAATCAGAATATA+TGG + chr6_4:18762411-18762430 Msa0980510:intron 20.0%
!! CAACAAAAATCAGAATATAT+GGG + chr6_4:18762412-18762431 Msa0980510:intron 20.0%
!! ATAATGAATAACTTACCTTA+TGG + chr6_4:18762488-18762507 Msa0980510:intron 20.0%
! TCCTTTATTAAGTATCTTGA+TGG + chr6_4:18758821-18758840 Msa0980510:intron 25.0%
! TCCATCAAGATACTTAATAA+AGG - chr6_4:18758825-18758844 None:intergenic 25.0%
! TTGATGGAATGTAAAATTTC+CGG + chr6_4:18758837-18758856 Msa0980510:intron 25.0%
! ACTATCTTTATGTTGAATCT+TGG - chr6_4:18759057-18759076 None:intergenic 25.0%
!!! ATGCTTGTAAAATTGATTTG+TGG - chr6_4:18759493-18759512 None:intergenic 25.0%
!!! TTTACTTGTGTTTTTATGCA+TGG - chr6_4:18759545-18759564 None:intergenic 25.0%
! TAACATTAGCAAACATTAGA+AGG + chr6_4:18759586-18759605 Msa0980510:intron 25.0%
! TAAAACCAATATACTACACT+CGG + chr6_4:18759990-18760009 Msa0980510:intron 25.0%
! TATCTACGTCAAAATATCAA+AGG + chr6_4:18760199-18760218 Msa0980510:intron 25.0%
! TTTATTAATGCATCGTATGA+AGG - chr6_4:18760265-18760284 None:intergenic 25.0%
!! GAGATTTTACTATAATAGGA+AGG - chr6_4:18760411-18760430 None:intergenic 25.0%
!!! AACTCTAAGATTATCATTCA+AGG + chr6_4:18760563-18760582 Msa0980510:intron 25.0%
!!! ACTCTAAGATTATCATTCAA+GGG + chr6_4:18760564-18760583 Msa0980510:intron 25.0%
!! TTAGCTTTCTTAATTGATTC+CGG + chr6_4:18760795-18760814 Msa0980510:intron 25.0%
! TTCAAACTAAAAGTCGATTA+TGG + chr6_4:18760888-18760907 Msa0980510:intron 25.0%
!!! AATTGATTCTAGAATTCGAA+AGG - chr6_4:18761005-18761024 None:intergenic 25.0%
! ATAAAGTTGAAGCTGAAATA+TGG - chr6_4:18761055-18761074 None:intergenic 25.0%
! AAATCAATTCTAGTCCATAA+AGG + chr6_4:18761160-18761179 Msa0980510:intron 25.0%
! GAATAAAATATTGACATGGT+GGG - chr6_4:18761539-18761558 None:intergenic 25.0%
! TGAATAAAATATTGACATGG+TGG - chr6_4:18761540-18761559 None:intergenic 25.0%
! TCGCAATTTATAACATTGTT+GGG - chr6_4:18761768-18761787 None:intergenic 25.0%
! ATCGCAATTTATAACATTGT+TGG - chr6_4:18761769-18761788 None:intergenic 25.0%
!!! CATTGATTAATGTTTTAGTG+TGG + chr6_4:18761817-18761836 Msa0980510:intron 25.0%
! AATACAATCGATGTAACTAT+AGG - chr6_4:18761845-18761864 None:intergenic 25.0%
!! TTGAAGAAGAAGTGTATTAA+TGG + chr6_4:18761919-18761938 Msa0980510:CDS 25.0%
! TTCTGTAAACGGTTTATTAA+AGG - chr6_4:18762203-18762222 None:intergenic 25.0%
! AAATGAAGTCTTTCTGTAAA+CGG - chr6_4:18762214-18762233 None:intergenic 25.0%
!! TTACAGAAAGACTTCATTTT+CGG + chr6_4:18762215-18762234 Msa0980510:intron 25.0%
! TCAAGGTCTCAAATAAATTA+TGG - chr6_4:18762259-18762278 None:intergenic 25.0%
! AATGGAGGATTATTTAATCT+AGG - chr6_4:18762381-18762400 None:intergenic 25.0%
! GTTGAAAAGAAATTAAATGG+AGG - chr6_4:18762396-18762415 None:intergenic 25.0%
! ATATATGGGACAAAAGTAAA+AGG + chr6_4:18762426-18762445 Msa0980510:intron 25.0%
ACTTGAGGTTACATTAATCT+TGG - chr6_4:18758238-18758257 None:intergenic 30.0%
TGCAAACTCAATTGATGAAT+AGG + chr6_4:18758330-18758349 Msa0980510:CDS 30.0%
AAACTCAATTGATGAATAGG+AGG + chr6_4:18758333-18758352 Msa0980510:CDS 30.0%
TGAAGTTGTTCATGTTCATA+AGG - chr6_4:18758487-18758506 None:intergenic 30.0%
! ATGATGGTGCAGTAATATAA+TGG - chr6_4:18758707-18758726 None:intergenic 30.0%
AATAATGCTATAGGGGATAA+AGG - chr6_4:18758769-18758788 None:intergenic 30.0%
TCCTTGTGAATAATGCTATA+GGG - chr6_4:18758777-18758796 None:intergenic 30.0%
ATCCTTGTGAATAATGCTAT+AGG - chr6_4:18758778-18758797 None:intergenic 30.0%
TCATTTAACAGCTTAATGCT+TGG - chr6_4:18758918-18758937 None:intergenic 30.0%
TCTGATACTAATTGCAATTG+AGG - chr6_4:18759013-18759032 None:intergenic 30.0%
CTAGTTTCCACAATTATTAC+CGG - chr6_4:18759146-18759165 None:intergenic 30.0%
AAACTAGAAGTGATTGAATG+TGG + chr6_4:18759159-18759178 Msa0980510:intron 30.0%
CAATCTCAATTGTGTAATGA+AGG + chr6_4:18759320-18759339 Msa0980510:intron 30.0%
GCATTCATGTAGAGATTAAA+AGG + chr6_4:18759509-18759528 Msa0980510:intron 30.0%
TTCATGTAGAGATTAAAAGG+AGG + chr6_4:18759512-18759531 Msa0980510:intron 30.0%
GACGTAGATAAGTAATTGAA+AGG - chr6_4:18760189-18760208 None:intergenic 30.0%
AATATAAACTGCTTGTAGAC+TGG - chr6_4:18760309-18760328 None:intergenic 30.0%
TAATAGGAAGGCAAGTATTT+AGG - chr6_4:18760399-18760418 None:intergenic 30.0%
TAAGATTATCATTCAAGGGA+AGG + chr6_4:18760568-18760587 Msa0980510:intron 30.0%
!! AATGTAAAAGTGTCTGATGT+AGG - chr6_4:18760679-18760698 None:intergenic 30.0%
!! GGCTTGTGTTTGTTATTAAT+AGG - chr6_4:18760712-18760731 None:intergenic 30.0%
TACCTTCAATTCACTTTAAC+CGG - chr6_4:18760817-18760836 None:intergenic 30.0%
! AACTAAGAATCTTTTCCAGA+AGG + chr6_4:18760937-18760956 Msa0980510:intron 30.0%
!! AGTAGAATTGATTTTCCTTC+TGG - chr6_4:18760955-18760974 None:intergenic 30.0%
TTGAAATCACTAAAACGCAT+CGG + chr6_4:18760974-18760993 Msa0980510:intron 30.0%
!! CTACCATTTTGATGTAAAGT+AGG - chr6_4:18761403-18761422 None:intergenic 30.0%
CTACTTTACATCAAAATGGT+AGG + chr6_4:18761401-18761420 Msa0980510:intron 30.0%
! TGGAGAGTACAAGAAAAAAA+GGG - chr6_4:18761475-18761494 None:intergenic 30.0%
GCGTGAATAAAATATTGACA+TGG - chr6_4:18761543-18761562 None:intergenic 30.0%
TTATATGTGACGATTTGTGA+GGG - chr6_4:18761738-18761757 None:intergenic 30.0%
CAATTTATAACATTGTTGGG+TGG - chr6_4:18761765-18761784 None:intergenic 30.0%
GTTGTGACTATATATAGTTG+TGG - chr6_4:18761798-18761817 None:intergenic 30.0%
TATTTGTCTGTGATTCTCTA+TGG + chr6_4:18761861-18761880 Msa0980510:intron 30.0%
!!! TAGTCTTCATTGCTTTTTTG+CGG - chr6_4:18762062-18762081 None:intergenic 30.0%
AATGAAGACTATAACCTATG+AGG + chr6_4:18762071-18762090 Msa0980510:CDS 30.0%
! AATTTATTTGAGACCTTGAG+AGG + chr6_4:18762260-18762279 Msa0980510:intron 30.0%
AATATTTGCTTAACCCACTT+GGG - chr6_4:18762325-18762344 None:intergenic 30.0%
TGAAGTTGTTCATGTTCATA+AGG - chr6_4:18758487-18758506 None:intergenic 30.0%
GTTGTTCATGTTCATAAGGT+TGG - chr6_4:18758483-18758502 None:intergenic 35.0%
GAAAGATGATTAAGAACTCC+AGG + chr6_4:18758592-18758611 Msa0980510:intron 35.0%
TGGAAATACATTTGACGAGA+TGG - chr6_4:18758687-18758706 None:intergenic 35.0%
TGGAAATACATTGACGATGA+TGG - chr6_4:18758723-18758742 None:intergenic 35.0%
CCTTGTGAATAATGCTATAG+GGG - chr6_4:18758776-18758795 None:intergenic 35.0%
ACAGCTTAATGCTTGGATTT+AGG - chr6_4:18758911-18758930 None:intergenic 35.0%
TAACACTCTTCGAACTGTTA+TGG + chr6_4:18759084-18759103 Msa0980510:intron 35.0%
! TATTGATAACCAAGGAAGCA+CGG - chr6_4:18759445-18759464 None:intergenic 35.0%
! AGGTGAACTATTGATAACCA+AGG - chr6_4:18759453-18759472 None:intergenic 35.0%
! TGGTTTTCTGTGCGAAAAAA+AGG - chr6_4:18759473-18759492 None:intergenic 35.0%
TAGTTGTCAAAGCAAAAACG+CGG + chr6_4:18759614-18759633 Msa0980510:intron 35.0%
TTTAATACCCTTGGCATCTT+AGG + chr6_4:18760143-18760162 Msa0980510:intron 35.0%
TTAATACCCTTGGCATCTTA+GGG + chr6_4:18760144-18760163 Msa0980510:intron 35.0%
!! TATTGATTCTGCCTTCTGAT+CGG + chr6_4:18760364-18760383 Msa0980510:intron 35.0%
AGGTTAAGAGTAAGGTCTTT+AGG - chr6_4:18760483-18760502 None:intergenic 35.0%
TAGGCTATAGGTTAAGAGTA+AGG - chr6_4:18760491-18760510 None:intergenic 35.0%
TTGTTAAGATGGTAGGCTAT+AGG - chr6_4:18760503-18760522 None:intergenic 35.0%
!! TAATCCGTAGCTTGTTAAGA+TGG - chr6_4:18760514-18760533 None:intergenic 35.0%
! TAACAAGCTACGGATTAATG+TGG + chr6_4:18760517-18760536 Msa0980510:intron 35.0%
CAAGGGAAGGTTGTAAAAAA+TGG + chr6_4:18760581-18760600 Msa0980510:intron 35.0%
GATATTACTTTGAATGGGAC+TGG - chr6_4:18760733-18760752 None:intergenic 35.0%
TTCCGGTTAAAGTGAATTGA+AGG + chr6_4:18760812-18760831 Msa0980510:intron 35.0%
! GCACAAAGTTGATTCCTTTA+TGG - chr6_4:18761177-18761196 None:intergenic 35.0%
GAATCAACTTTGTGCTTGTT+TGG + chr6_4:18761182-18761201 Msa0980510:intron 35.0%
! CAATAGTTTCCTTTTTGACG+TGG - chr6_4:18761210-18761229 None:intergenic 35.0%
! AATTCCAGCTTTGACGTAAT+CGG - chr6_4:18761234-18761253 None:intergenic 35.0%
GTGTTTGATTGGATATACGT+TGG - chr6_4:18761300-18761319 None:intergenic 35.0%
ACGCTCATATAGTGTTTGAT+TGG - chr6_4:18761311-18761330 None:intergenic 35.0%
ATCAAACACTATATGAGCGT+AGG + chr6_4:18761311-18761330 Msa0980510:intron 35.0%
TCAAACACTATATGAGCGTA+GGG + chr6_4:18761312-18761331 Msa0980510:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + chr6_4:18761369-18761388 Msa0980510:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr6_4:18761374-18761393 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr6_4:18761374-18761393 Msa0980510:intron 35.0%
CTGCCTACTTTACATCAAAA+TGG + chr6_4:18761397-18761416 Msa0980510:intron 35.0%
TTAAAGCTCCTGTATTTGCA+GGG - chr6_4:18761440-18761459 None:intergenic 35.0%
ATTAAAGCTCCTGTATTTGC+AGG - chr6_4:18761441-18761460 None:intergenic 35.0%
! ATACAGGAGCTTTAATGCAT+CGG + chr6_4:18761445-18761464 Msa0980510:intron 35.0%
! GTGGAGAGTACAAGAAAAAA+AGG - chr6_4:18761476-18761495 None:intergenic 35.0%
TATGTGAGAGAAAGAGTTCA+AGG - chr6_4:18761651-18761670 None:intergenic 35.0%
TATATGTGACGATTTGTGAG+GGG - chr6_4:18761737-18761756 None:intergenic 35.0%
CTTATATGTGACGATTTGTG+AGG - chr6_4:18761739-18761758 None:intergenic 35.0%
! GAAAGACTTCATTTTCGGTA+AGG + chr6_4:18762220-18762239 Msa0980510:intron 35.0%
GAATATTTGCTTAACCCACT+TGG - chr6_4:18762326-18762345 None:intergenic 35.0%
TGCACAGATACATTGAAGTT+TGG - chr6_4:18762640-18762659 None:intergenic 35.0%
GTTCATGTTCATAAGGTTGT+TGG - chr6_4:18762743-18762762 None:intergenic 35.0%
CCATTGTAGTATCAAAACCA+GGG - chr6_4:18762774-18762793 None:intergenic 35.0%
TCCATTGTAGTATCAAAACC+AGG - chr6_4:18762775-18762794 None:intergenic 35.0%
TGCTGCAACAATTTCCTATG+AGG + chr6_4:18757936-18757955 Msa0980510:CDS 40.0%
CATCATTCATTCACGACTTG+AGG - chr6_4:18758253-18758272 None:intergenic 40.0%
TGCACAGGTACATTGAAGTT+TGG - chr6_4:18758425-18758444 None:intergenic 40.0%
GATGAGTTGTTGGAATATGC+TGG - chr6_4:18758449-18758468 None:intergenic 40.0%
GTTCATGTTCATAAGGTTGG+TGG - chr6_4:18758480-18758499 None:intergenic 40.0%
AACATGAACAACTTCAACCC+TGG + chr6_4:18758491-18758510 Msa0980510:CDS 40.0%
! AACAACTTCAACCCTGGTTT+TGG + chr6_4:18758497-18758516 Msa0980510:CDS 40.0%
! TAGAGCCTTTTCAAAACTCC+AGG + chr6_4:18758555-18758574 Msa0980510:CDS 40.0%
!!! GACATCCTGGAGTTTTGAAA+AGG - chr6_4:18758563-18758582 None:intergenic 40.0%
TTTCTCAAAACGAGACATCC+TGG - chr6_4:18758576-18758595 None:intergenic 40.0%
TTCCTCATAATGAGACATCC+TGG - chr6_4:18758613-18758632 None:intergenic 40.0%
CCCCTATAGCATTATTCACA+AGG + chr6_4:18758773-18758792 Msa0980510:intron 40.0%
ACTATCACTAACACAGACAC+CGG + chr6_4:18759124-18759143 Msa0980510:intron 40.0%
ACAGACACCGGTAATAATTG+TGG + chr6_4:18759136-18759155 Msa0980510:intron 40.0%
TGTCGAACATTGACAAGTGT+CGG + chr6_4:18759221-18759240 Msa0980510:intron 40.0%
AGATTGAGCGTATCAGGAAA+AGG - chr6_4:18759306-18759325 None:intergenic 40.0%
CAATTGAGATTGAGCGTATC+AGG - chr6_4:18759312-18759331 None:intergenic 40.0%
! CAACTTTCAAGTGTCTTCTG+AGG + chr6_4:18759389-18759408 Msa0980510:intron 40.0%
AACCAATATACTACACTCGG+TGG + chr6_4:18759993-18760012 Msa0980510:intron 40.0%
GAGAAAGATGCGAACCAATT+TGG - chr6_4:18760243-18760262 None:intergenic 40.0%
! ATTGATTCTGCCTTCTGATC+GGG + chr6_4:18760365-18760384 Msa0980510:intron 40.0%
GGAAGGCAAGTATTTAGGTA+TGG - chr6_4:18760394-18760413 None:intergenic 40.0%
CCTACCATCTTAACAAGCTA+CGG + chr6_4:18760507-18760526 Msa0980510:intron 40.0%
ATCAATCCTAGTTTCTGCTC+TGG + chr6_4:18761084-18761103 Msa0980510:intron 40.0%
! TGTTTGGAACCACGTCAAAA+AGG + chr6_4:18761198-18761217 Msa0980510:intron 40.0%
! ATTCCAGCTTTGACGTAATC+GGG - chr6_4:18761233-18761252 None:intergenic 40.0%
TTGCTTAGACGACAACACAT+TGG + chr6_4:18761256-18761275 Msa0980510:intron 40.0%
! TGATTGGATATACGTTGGCT+TGG - chr6_4:18761295-18761314 None:intergenic 40.0%
TATGAGCGTAGGGTTATATC+TGG + chr6_4:18761322-18761341 Msa0980510:intron 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + chr6_4:18761368-18761387 Msa0980510:intron 40.0%
! TACAGGAGCTTTAATGCATC+GGG + chr6_4:18761446-18761465 Msa0980510:intron 40.0%
TGTGTGAAACTTACCTGGAA+AGG - chr6_4:18761507-18761526 None:intergenic 40.0%
TCGTTTGTGTGAAACTTACC+TGG - chr6_4:18761512-18761531 None:intergenic 40.0%
TGTTGAATAGCACGTGGTAT+GGG - chr6_4:18761616-18761635 None:intergenic 40.0%
!! AAAGAGTTCAAGGTTGGTGA+GGG - chr6_4:18761641-18761660 None:intergenic 40.0%
TGAGAGAAAGAGTTCAAGGT+TGG - chr6_4:18761647-18761666 None:intergenic 40.0%
GGACAAGATCTTCAACACAT+TGG - chr6_4:18762022-18762041 None:intergenic 40.0%
! GCGGTGAATAGTTGGAATTT+TGG - chr6_4:18762043-18762062 None:intergenic 40.0%
!!! GCTTTTTTGCGGTGAATAGT+TGG - chr6_4:18762051-18762070 None:intergenic 40.0%
ATTAATTGGATCAGCGATCC+TGG - chr6_4:18762103-18762122 None:intergenic 40.0%
AGGATCGCTGATCCAATTAA+TGG + chr6_4:18762102-18762121 Msa0980510:CDS 40.0%
GTGGACACACAACCATTAAT+TGG - chr6_4:18762117-18762136 None:intergenic 40.0%
! TTTCTCCAAAGCACTAATGG+TGG - chr6_4:18762136-18762155 None:intergenic 40.0%
! CTGTTTCTCCAAAGCACTAA+TGG - chr6_4:18762139-18762158 None:intergenic 40.0%
!! CATTAGTGCTTTGGAGAAAC+AGG + chr6_4:18762137-18762156 Msa0980510:intron 40.0%
AAAGCTCAGCAGATGAACAA+CGG + chr6_4:18762553-18762572 Msa0980510:CDS 40.0%
TTCATGAGATCTTCGATGGA+AGG - chr6_4:18762688-18762707 None:intergenic 40.0%
CATGTTCATGAGATCTTCGA+TGG - chr6_4:18762692-18762711 None:intergenic 40.0%
CATGTTCATAAGGTTGTTGG+TGG - chr6_4:18762740-18762759 None:intergenic 40.0%
AACATGAACAACTTCAACCC+TGG + chr6_4:18758491-18758510 Msa0980510:CDS 40.0%
!!! CCCTGGTTTTGATACTACAA+TGG + chr6_4:18762771-18762790 Msa0980510:CDS 40.0%
! TCAAAGCTCTGTGATGATGA+GGG - chr6_4:18762805-18762824 None:intergenic 40.0%
! TTGAGCCTTTTCAAAACTCC+AGG + chr6_4:18762821-18762840 Msa0980510:CDS 40.0%
!!! GAGAACCTGGAGTTTTGAAA+AGG - chr6_4:18762829-18762848 None:intergenic 40.0%
TCCAGGTTCTCTTATCATCA+GGG + chr6_4:18762838-18762857 Msa0980510:CDS 40.0%
ATGGTAGTAGTTCGGGAAAC+AGG + chr6_4:18757668-18757687 Msa0980510:CDS 45.0%
AAGAGCAACACAAGACGAAC+CGG + chr6_4:18757732-18757751 Msa0980510:CDS 45.0%
AAGAACTTGCAAGCACCACA+CGG - chr6_4:18757766-18757785 None:intergenic 45.0%
! TTGAGGAGGAAGTGTAGTAG+TGG + chr6_4:18757784-18757803 Msa0980510:CDS 45.0%
TGCATCTTTGCACCCTACTT+TGG + chr6_4:18757808-18757827 Msa0980510:CDS 45.0%
CCTTGGTCAGTACCAAAGTA+GGG - chr6_4:18757823-18757842 None:intergenic 45.0%
ACCTTGGTCAGTACCAAAGT+AGG - chr6_4:18757824-18757843 None:intergenic 45.0%
! GAAGCACTTGTCCAACATTC+CGG + chr6_4:18757894-18757913 Msa0980510:CDS 45.0%
AAATTGTTGCAGCAGCTTCC+TGG - chr6_4:18757930-18757949 None:intergenic 45.0%
TTTCCTATGAGGCTCAAGCT+AGG + chr6_4:18757947-18757966 Msa0980510:CDS 45.0%
! AGGCTAGCTGATCCAGTTTA+TGG + chr6_4:18757967-18757986 Msa0980510:CDS 45.0%
CTGTTGCTGCAAAGCAAGAA+GGG - chr6_4:18758004-18758023 None:intergenic 45.0%
ACTTACATTATGGCCGATGC+AGG + chr6_4:18758277-18758296 Msa0980510:intron 45.0%
GGTTGCTGTACCAGTTGAAA+CGG - chr6_4:18758404-18758423 None:intergenic 45.0%
!! CATGTTCATAAGGTTGGTGG+TGG - chr6_4:18758477-18758496 None:intergenic 45.0%
! TTTTGGCCTCACAATGGAGA+CGG + chr6_4:18758514-18758533 Msa0980510:CDS 45.0%
CTCCAGGATGTCTCATTATG+AGG + chr6_4:18758608-18758627 Msa0980510:intron 45.0%
ACACTTGACACAGACACTTG+TGG - chr6_4:18759185-18759204 None:intergenic 45.0%
AGTGTCTGTGTCAAGTGTGT+CGG + chr6_4:18759187-18759206 Msa0980510:intron 45.0%
CCTTCCTCTGTTGTCAAACA+CGG - chr6_4:18760077-18760096 None:intergenic 45.0%
TGGTAACCCTAAGATGCCAA+GGG - chr6_4:18760153-18760172 None:intergenic 45.0%
ATGGTAACCCTAAGATGCCA+AGG - chr6_4:18760154-18760173 None:intergenic 45.0%
! CTGCTTGTAGACTGGTGTTA+TGG - chr6_4:18760301-18760320 None:intergenic 45.0%
!! CCGTAGCTTGTTAAGATGGT+AGG - chr6_4:18760510-18760529 None:intergenic 45.0%
AATCCTAGTTTCTGCTCTGG+AGG + chr6_4:18761087-18761106 Msa0980510:intron 45.0%
TATTTGCAGGGTTCGGAAAG+GGG - chr6_4:18761428-18761447 None:intergenic 45.0%
GTATTTGCAGGGTTCGGAAA+GGG - chr6_4:18761429-18761448 None:intergenic 45.0%
TGTATTTGCAGGGTTCGGAA+AGG - chr6_4:18761430-18761449 None:intergenic 45.0%
TTTCCGAACCCTGCAAATAC+AGG + chr6_4:18761429-18761448 Msa0980510:intron 45.0%
TCCACGAAGATAACCTTTCC+AGG + chr6_4:18761491-18761510 Msa0980510:intron 45.0%
ACCTGGAAAGGTTATCTTCG+TGG - chr6_4:18761495-18761514 None:intergenic 45.0%
TTGAATAGCACGTGGTATGG+GGG - chr6_4:18761614-18761633 None:intergenic 45.0%
GTTGAATAGCACGTGGTATG+GGG - chr6_4:18761615-18761634 None:intergenic 45.0%
GTGTTGAATAGCACGTGGTA+TGG - chr6_4:18761617-18761636 None:intergenic 45.0%
!! GAAAGAGTTCAAGGTTGGTG+AGG - chr6_4:18761642-18761661 None:intergenic 45.0%
GTTGGTCATGTGAATGTGGT+TGG - chr6_4:18761707-18761726 None:intergenic 45.0%
GAACGTTGGTCATGTGAATG+TGG - chr6_4:18761711-18761730 None:intergenic 45.0%
CAGATAAATCGACACCGTGT+GGG + chr6_4:18761884-18761903 Msa0980510:intron 45.0%
AGATAAATCGACACCGTGTG+GGG + chr6_4:18761885-18761904 Msa0980510:intron 45.0%
TGCATCTTTGCACCCTACTT+TGG + chr6_4:18757808-18757827 Msa0980510:CDS 45.0%
GACTATAACCTATGAGGCTC+AGG + chr6_4:18762077-18762096 Msa0980510:CDS 45.0%
TGTGTCCACCATTAGTGCTT+TGG + chr6_4:18762128-18762147 Msa0980510:intron 45.0%
!! CTTAGAGAGTACTCCTCTCA+AGG - chr6_4:18762276-18762295 None:intergenic 45.0%
!! CTTGAGAGGAGTACTCTCTA+AGG + chr6_4:18762274-18762293 Msa0980510:intron 45.0%
TTTGCTTAACCCACTTGGGT+TGG - chr6_4:18762321-18762340 None:intergenic 45.0%
ACTTACCTTATGGCCAATCC+AGG + chr6_4:18762498-18762517 Msa0980510:intron 45.0%
!! GATGGATTGTTGGAGTATGC+TGG - chr6_4:18762664-18762683 None:intergenic 45.0%
!! GATGGAAGGAGATGGATTGT+TGG - chr6_4:18762674-18762693 None:intergenic 45.0%
AGATCTTCGATGGAAGGAGA+TGG - chr6_4:18762682-18762701 None:intergenic 45.0%
! CTCAAAGCTCTGTGATGATG+AGG - chr6_4:18762806-18762825 None:intergenic 45.0%
CTCCAGGTTCTCTTATCATC+AGG + chr6_4:18762837-18762856 Msa0980510:CDS 45.0%
TCCCTGATGATAAGAGAACC+TGG - chr6_4:18762842-18762861 None:intergenic 45.0%
!! GGGTGGTGATGGTAGTAGTT+CGG + chr6_4:18757660-18757679 Msa0980510:CDS 50.0%
!! GGTGGTGATGGTAGTAGTTC+GGG + chr6_4:18757661-18757680 Msa0980510:CDS 50.0%
GTGGTGCTTGCAAGTTCTTG+AGG + chr6_4:18757767-18757786 Msa0980510:CDS 50.0%
GTGCTTGCAAGTTCTTGAGG+AGG + chr6_4:18757770-18757789 Msa0980510:CDS 50.0%
!! CCCTACTTTGGTACTGACCA+AGG + chr6_4:18757820-18757839 Msa0980510:CDS 50.0%
!! CTTTGGTACTGACCAAGGTG+CGG + chr6_4:18757825-18757844 Msa0980510:CDS 50.0%
TAAGTTTGCGGCTGTGCACA+AGG + chr6_4:18757849-18757868 Msa0980510:intron 50.0%
TAGCCTAGCTTGAGCCTCAT+AGG - chr6_4:18757953-18757972 None:intergenic 50.0%
GTGGACACACAGCCATAAAC+TGG - chr6_4:18757982-18758001 None:intergenic 50.0%
TTGCTGCAAAGCAAGAAGGG+TGG - chr6_4:18758001-18758020 None:intergenic 50.0%
CCTGTTGCTGCAAAGCAAGA+AGG - chr6_4:18758005-18758024 None:intergenic 50.0%
CCTTCTTGCTTTGCAGCAAC+AGG + chr6_4:18758002-18758021 Msa0980510:CDS 50.0%
TACATTATGGCCGATGCAGG+TGG + chr6_4:18758280-18758299 Msa0980510:intron 50.0%
TTGAAACGGCGGCTGATATG+GGG - chr6_4:18758390-18758409 None:intergenic 50.0%
GTTGAAACGGCGGCTGATAT+GGG - chr6_4:18758391-18758410 None:intergenic 50.0%
AGTTGAAACGGCGGCTGATA+TGG - chr6_4:18758392-18758411 None:intergenic 50.0%
ATATCAGCCGCCGTTTCAAC+TGG + chr6_4:18758391-18758410 Msa0980510:CDS 50.0%
TGCTGTACCAGTTGAAACGG+CGG - chr6_4:18758401-18758420 None:intergenic 50.0%
! TTGGAATATGCTGGCTGCAC+AGG - chr6_4:18758440-18758459 None:intergenic 50.0%
GGTGGAAGCAGATGAGTTGT+TGG - chr6_4:18758459-18758478 None:intergenic 50.0%
CCATTGTGAGGCCAAAACCA+GGG - chr6_4:18758511-18758530 None:intergenic 50.0%
TCCATTGTGAGGCCAAAACC+AGG - chr6_4:18758512-18758531 None:intergenic 50.0%
!! GGCTCTAAGCTCTGTGATGA+AGG - chr6_4:18758542-18758561 None:intergenic 50.0%
! TGATAACCAAGGAAGCACGG+AGG - chr6_4:18759442-18759461 None:intergenic 50.0%
GTCAAAGCAAAAACGCGGTG+CGG + chr6_4:18759619-18759638 Msa0980510:intron 50.0%
CGCCACCGAGTGTAGTATAT+TGG - chr6_4:18759998-18760017 None:intergenic 50.0%
CCGTGTTTGACAACAGAGGA+AGG + chr6_4:18760074-18760093 Msa0980510:intron 50.0%
GGTATGGTAACCCGATCAGA+AGG - chr6_4:18760378-18760397 None:intergenic 50.0%
TCTCCTCCAGAGCAGAAACT+AGG - chr6_4:18761093-18761112 None:intergenic 50.0%
TTGCCCGATTACGTCAAAGC+TGG + chr6_4:18761227-18761246 Msa0980510:intron 50.0%
GCTCCTGTATTTGCAGGGTT+CGG - chr6_4:18761435-18761454 None:intergenic 50.0%
!! AGGGAGTGTTGAATAGCACG+TGG - chr6_4:18761622-18761641 None:intergenic 50.0%
GGTTGGCAACGTGAATGATG+TGG - chr6_4:18761690-18761709 None:intergenic 50.0%
TTTGTGAGGGGAGTGAACGT+TGG - chr6_4:18761725-18761744 None:intergenic 50.0%
GCAGATAAATCGACACCGTG+TGG + chr6_4:18761883-18761902 Msa0980510:intron 50.0%
! TAGCTTTGCAGCTGTGCACA+AGG + chr6_4:18761984-18762003 Msa0980510:CDS 50.0%
TACCTTATGGCCAATCCAGG+TGG + chr6_4:18762501-18762520 Msa0980510:intron 50.0%
! GTAGCATTTGCTGATGCTGC+AGG - chr6_4:18762612-18762631 None:intergenic 50.0%
!! TGTTGGTGGCAGCAAGAACA+GGG - chr6_4:18762726-18762745 None:intergenic 50.0%
!! TTGTTGGTGGCAGCAAGAAC+AGG - chr6_4:18762727-18762746 None:intergenic 50.0%
GAACCGGTTATAACGCCGTG+TGG + chr6_4:18757748-18757767 Msa0980510:CDS 55.0%
GCACCACACGGCGTTATAAC+CGG - chr6_4:18757754-18757773 None:intergenic 55.0%
CCAAGGTGCGGCTAAGTTTG+CGG + chr6_4:18757837-18757856 Msa0980510:CDS 55.0%
TGCATAGCTGCCACCTGCAT+CGG - chr6_4:18758293-18758312 None:intergenic 55.0%
!!! CCCTGGTTTTGGCCTCACAA+TGG + chr6_4:18758508-18758527 Msa0980510:CDS 55.0%
!! AAGGTGCCGTCTCCATTGTG+AGG - chr6_4:18758523-18758542 None:intergenic 55.0%
GGCCACCCCAAAAATTGACG+CGG + chr6_4:18759645-18759664 Msa0980510:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG - chr6_4:18759654-18759673 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG - chr6_4:18759655-18759674 None:intergenic 55.0%
! GTGACGCGGCTCCTTGATTT+TGG + chr6_4:18760020-18760039 Msa0980510:intron 55.0%
AAGTGCTTGCAAGCCCCACA+CGG - chr6_4:18761901-18761920 None:intergenic 55.0%
GCAGCTGTGCACAAGGTCTT+TGG + chr6_4:18761991-18762010 Msa0980510:CDS 55.0%
TAACCTATGAGGCTCAGGCC+AGG + chr6_4:18762082-18762101 Msa0980510:CDS 55.0%
!! TGGCCTGGTGGTGTTGGTTT+GGG - chr6_4:18762301-18762320 None:intergenic 55.0%
!! TTGGCCTGGTGGTGTTGGTT+TGG - chr6_4:18762302-18762321 None:intergenic 55.0%
!! TTAACCCACTTGGGTTGGCC+TGG - chr6_4:18762316-18762335 None:intergenic 55.0%
!! CTCCACCTGGATTGGCCATA+AGG - chr6_4:18762506-18762525 None:intergenic 55.0%
CTTATGGCCAATCCAGGTGG+AGG + chr6_4:18762504-18762523 Msa0980510:intron 55.0%
TTGCTGATGCTGCAGGTCTG+TGG - chr6_4:18762605-18762624 None:intergenic 55.0%
GCTGAGTCACAGGGTGGTGA+TGG + chr6_4:18757649-18757668 Msa0980510:CDS 60.0%
CCGCAAACTTAGCCGCACCT+TGG - chr6_4:18757840-18757859 None:intergenic 60.0%
! GCGGCTGTGCACAAGGTGTT+TGG + chr6_4:18757856-18757875 Msa0980510:intron 60.0%
! GCGATGGCTAGCCGGAATGT+TGG - chr6_4:18757908-18757927 None:intergenic 60.0%
TTGCAGCAGCTTCCTGGCGA+TGG - chr6_4:18757924-18757943 None:intergenic 60.0%
GGTGGCAGCTATGCAAGCAG+AGG + chr6_4:18758298-18758317 Msa0980510:intron 60.0%
CTGTCTCCTCCGTGCTTCCT+TGG + chr6_4:18759433-18759452 Msa0980510:intron 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG - chr6_4:18759650-18759669 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG - chr6_4:18759653-18759672 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG + chr6_4:18759650-18759669 Msa0980510:intron 60.0%
AATTGACGCGGCGCGGTATG+CGG + chr6_4:18759657-18759676 Msa0980510:intron 60.0%
GCGGGCGCTATTACATGACG+CGG + chr6_4:18759687-18759706 Msa0980510:intron 60.0%
TTGTCAAACACGGCCGCTCC+CGG - chr6_4:18760067-18760086 None:intergenic 60.0%
GCGGCCGTGTTTGACAACAG+AGG + chr6_4:18760070-18760089 Msa0980510:intron 60.0%
GATCCTGGCCTGAGCCTCAT+AGG - chr6_4:18762088-18762107 None:intergenic 60.0%
GGTCCCAAACCAACACCACC+AGG + chr6_4:18762295-18762314 Msa0980510:intron 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG - chr6_4:18762307-18762326 None:intergenic 60.0%
ACCACCAGGCCAACCCAAGT+GGG + chr6_4:18762309-18762328 Msa0980510:intron 60.0%
TGCAGTGCCTCCACCTGGAT+TGG - chr6_4:18762514-18762533 None:intergenic 60.0%
! CATTCCGGCTAGCCATCGCC+AGG + chr6_4:18757909-18757928 Msa0980510:CDS 65.0%
GCTTCCTGGCGATGGCTAGC+CGG - chr6_4:18757916-18757935 None:intergenic 65.0%
AGCAAAAACGCGGTGCGGCG+CGG + chr6_4:18759624-18759643 Msa0980510:intron 65.0%
ATTGACGCGGCGCGGTATGC+GGG + chr6_4:18759658-18759677 Msa0980510:intron 65.0%
! CACTCGGTGGCGTTGTGACG+CGG + chr6_4:18760006-18760025 Msa0980510:intron 65.0%
GCGCGGAGCGGCCAAAATCA+AGG - chr6_4:18760034-18760053 None:intergenic 65.0%
CACCACCAGGCCAACCCAAG+TGG + chr6_4:18762308-18762327 Msa0980510:intron 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG - chr6_4:18762313-18762332 None:intergenic 65.0%
CTGCTTGCAGTGCCTCCACC+TGG - chr6_4:18762519-18762538 None:intergenic 65.0%
!! GGTGGAGGCACTGCAAGCAG+AGG + chr6_4:18762519-18762538 Msa0980510:intron 65.0%
! CGCGGTATGCGGGCGCGACG+CGG + chr6_4:18759668-18759687 Msa0980510:intron 80.0%
! GCGGTATGCGGGCGCGACGC+GGG + chr6_4:18759669-18759688 Msa0980510:intron 80.0%
! GGCGCTATCGCGGCGCGGAG+CGG - chr6_4:18760046-18760065 None:intergenic 80.0%
! GCTCCGCGCCGCGATAGCGC+CGG + chr6_4:18760045-18760064 Msa0980510:intron 80.0%
! CTCCGCGCCGCGATAGCGCC+GGG + chr6_4:18760046-18760065 Msa0980510:intron 80.0%
! CTCCCGGCGCTATCGCGGCG+CGG - chr6_4:18760051-18760070 None:intergenic 80.0%
!! CGCCGCGATAGCGCCGGGAG+CGG + chr6_4:18760051-18760070 Msa0980510:intron 80.0%
! GGCCGCTCCCGGCGCTATCG+CGG - chr6_4:18760056-18760075 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 18757646 18762870 18757646 ID=Msa0980510;Name=Msa0980510
chr6_4 mRNA 18757646 18762870 18757646 ID=Msa0980510-mRNA-1;Parent=Msa0980510;Name=Msa0980510-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0.2|0.16|6|0|413
chr6_4 exon 18757646 18757861 18757646 ID=Msa0980510-mRNA-1:exon:5838;Parent=Msa0980510-mRNA-1
chr6_4 exon 18757871 18758023 18757871 ID=Msa0980510-mRNA-1:exon:5839;Parent=Msa0980510-mRNA-1
chr6_4 exon 18758299 18758412 18758299 ID=Msa0980510-mRNA-1:exon:5840;Parent=Msa0980510-mRNA-1
chr6_4 exon 18758419 18758584 18758419 ID=Msa0980510-mRNA-1:exon:5841;Parent=Msa0980510-mRNA-1
chr6_4 exon 18761887 18762128 18761887 ID=Msa0980510-mRNA-1:exon:5842;Parent=Msa0980510-mRNA-1
chr6_4 exon 18762520 18762870 18762520 ID=Msa0980510-mRNA-1:exon:5843;Parent=Msa0980510-mRNA-1
chr6_4 CDS 18757646 18757861 18757646 ID=Msa0980510-mRNA-1:cds;Parent=Msa0980510-mRNA-1
chr6_4 CDS 18757871 18758023 18757871 ID=Msa0980510-mRNA-1:cds;Parent=Msa0980510-mRNA-1
chr6_4 CDS 18758299 18758412 18758299 ID=Msa0980510-mRNA-1:cds;Parent=Msa0980510-mRNA-1
chr6_4 CDS 18758419 18758584 18758419 ID=Msa0980510-mRNA-1:cds;Parent=Msa0980510-mRNA-1
chr6_4 CDS 18761887 18762128 18761887 ID=Msa0980510-mRNA-1:cds;Parent=Msa0980510-mRNA-1
chr6_4 CDS 18762520 18762870 18762520 ID=Msa0980510-mRNA-1:cds;Parent=Msa0980510-mRNA-1
Gene Sequence

>Msa0980510

ATGGCTGAGTCACAGGGTGGTGATGGTAGTAGTTCGGGAAACAGGCGCAATAAAAGCGCAAATGCTGCTGCAAAGCGTGCAATAGCAAGAGCAACACAAGACGAACCGGTTATAACGCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTAGTAGTGGATGCATCTTTGCACCCTACTTTGGTACTGACCAAGGTGCGGCTAAGTTTGCGGCTGTGTTTGGTGCTAGCAATGTGTCGAAGCACTTGTCCAACATTCCGGCTAGCCATCGCCAGGAAGCTGCTGCAACAATTTCCTATGAGGCTCAAGCTAGGCTAGCTGATCCAGTTTATGGCTGTGTGTCCACCCTTCTTGCTTTGCAGCAACAGGTGGCAGCTATGCAAGCAGAGGTCTCGATGATGCAAACTCAATTGATGAATAGGAGGCTTGCATATGCAAATGCAAGTACTCTTCAAGCCCCATATCAGCCGCCGTTTCAACTGCAACCAAACTTCAATGTACCTGTGCAGCCAGCATATTCCAACAACTCATCTGCTTCCACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGCCTCACAATGGAGACGGCACCTTCATCACAGAGCTTAGAGCCTTTTCAAAACTCCAGGATGTCTCATAAATCGACACCGTGTGGGGCTTGCAAGCACTTGAAGAAGAAGTGTATTAATGGATGCATCTTTGCACCCTACTTTGGTAAAAAACAAAATGAAGCTAGCTTTGCAGCTGTGCACAAGGTCTTTGGAGCTGCCAATGTGTTGAAGATCTTGTCCAAAATTCCAACTATTCACCGCAAAAAAGCAATGAAGACTATAACCTATGAGGCTCAGGCCAGGATCGCTGATCCAATTAATGGTTGTGTGGAGGCACTGCAAGCAGAGGTCTCAATGATGAAAGCTCAGCAGATGAACAACGGATTTGCATATGCGAATGCTCTTCAAACCACAGACCTGCAGCATCAGCAAATGCTACAGCAACCAAACTTCAATGTATCTGTGCAACCAGCATACTCCAACAATCCATCTCCTTCCATCGAAGATCTCATGAACATGAACAACTTCAACCCTGTTCTTGCTGCCACCAACAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGATACTACAATGGAGACAGCACCCTCATCATCACAGAGCTTTGAGCCTTTTCAAAACTCCAGGTTCTCTTATCATCAGGGAGACAATTAA
Protein sequence

>Msa0980510

MAESQGGDGSSSGNRRNKSANAAAKRAIARATQDEPVITPCGACKFLRRKCSSGCIFAPYFGTDQGAAKFAAVFGASNVSKHLSNIPASHRQEAAATISYEAQARLADPVYGCVSTLLALQQQVAAMQAEVSMMQTQLMNRRLAYANASTLQAPYQPPFQLQPNFNVPVQPAYSNNSSASTTNLMNMNNFNPGFGLTMETAPSSQSLEPFQNSRMSHKSTPCGACKHLKKKCINGCIFAPYFGKKQNEASFAAVHKVFGAANVLKILSKIPTIHRKKAMKTITYEAQARIADPINGCVEALQAEVSMMKAQQMNNGFAYANALQTTDLQHQQMLQQPNFNVSVQPAYSNNPSPSIEDLMNMNNFNPVLAATNNLMNMNNFNPGFDTTMETAPSSSQSFEPFQNSRFSYHQGDN*