Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951550 | KEH26162.1 | 60.563 | 71 | 12 | 1 | 79 | 149 | 17 | 71 | 3.78e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0951550 | A0A072U926 | 60.563 | 71 | 12 | 1 | 79 | 149 | 17 | 71 | 1.80e-17 | 81.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015140 | Msa0951550 | 0.807476 | 4.962646e-50 | -8.615850e-47 |
| Msa0065010 | Msa0951550 | 0.804675 | 1.927891e-49 | -8.615850e-47 |
| Msa0619920 | Msa0951550 | 0.827506 | 1.506393e-54 | -8.615850e-47 |
| Msa0704800 | Msa0951550 | 0.808495 | 3.011323e-50 | -8.615850e-47 |
| Msa0177230 | Msa0951550 | 0.811282 | 7.568796e-51 | -8.615850e-47 |
| Msa0208810 | Msa0951550 | 0.802883 | 4.540466e-49 | -8.615850e-47 |
| Msa0951550 | Msa1223330 | 0.802305 | 5.975778e-49 | -8.615850e-47 |
| Msa0951550 | Msa1253810 | 0.810310 | 1.228606e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 27 sgRNAs with CRISPR-Local
Find 604 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTGTCCGATCTGTACT+TGG | 0.371960 | 6_3:-42663481 | Msa0951550:intron |
| TCAGTCGACTTTCGGATTGA+TGG | 0.388930 | 6_3:+42661132 | None:intergenic |
| AATATGTTGACGTTCATAAC+AGG | 0.420073 | 6_3:-42661287 | Msa0951550:intron |
| TTTCCCAAGAAGACGAGAAA+AGG | 0.423803 | 6_3:+42654548 | None:intergenic |
| AGAAGGTTAACGTGTATGAT+AGG | 0.428550 | 6_3:-42654675 | Msa0951550:CDS |
| GAAAAGGGCATGGCTCATAT+TGG | 0.444360 | 6_3:+42654564 | None:intergenic |
| TTGTCATTCAAATAACCAAC+AGG | 0.445181 | 6_3:+42661970 | None:intergenic |
| GTTAACGTGTATGATAGGTT+TGG | 0.453719 | 6_3:-42654670 | Msa0951550:CDS |
| CATTCAGCTTGTGGCAGCAA+TGG | 0.468864 | 6_3:+42663504 | None:intergenic |
| CAGCTGATCCCAACAGTGAC+AGG | 0.471307 | 6_3:-42654612 | Msa0951550:CDS |
| GCTTGGGTCAGCACTATAGC+AGG | 0.474992 | 6_3:+42654586 | None:intergenic |
| GGCATGGCTCATATTGGCTT+GGG | 0.482781 | 6_3:+42654570 | None:intergenic |
| GGGCATGGCTCATATTGGCT+TGG | 0.487511 | 6_3:+42654569 | None:intergenic |
| GCAGGGAACCTGTCACTGTT+GGG | 0.494231 | 6_3:+42654604 | None:intergenic |
| AGTTGCAGCTGCTTCCTCAA+TGG | 0.501520 | 6_3:-42661163 | Msa0951550:CDS |
| AGCAGGGAACCTGTCACTGT+TGG | 0.506870 | 6_3:+42654603 | None:intergenic |
| TTCCCAAGAAGACGAGAAAA+GGG | 0.509066 | 6_3:+42654549 | None:intergenic |
| TTGCTGAGCGATCATGGCAC+TGG | 0.511895 | 6_3:-42663538 | None:intergenic |
| AAAGGAGAAAGAAATGTTCT+CGG | 0.520240 | 6_3:-42661928 | Msa0951550:intron |
| GACAGCAAGCATTCAGCTTG+TGG | 0.546957 | 6_3:+42663495 | None:intergenic |
| TGATGGAGCTCGTGCCATTG+AGG | 0.569237 | 6_3:+42661149 | None:intergenic |
| TGTATGATAGGTTTGGAGCT+CGG | 0.582274 | 6_3:-42654663 | Msa0951550:CDS |
| TTGGGAAATCGCAGCTGCTG+AGG | 0.588879 | 6_3:-42654533 | Msa0951550:CDS |
| CTGCAGACGACAAAGCCTGT+TGG | 0.651238 | 6_3:-42661985 | Msa0951550:intron |
| AAGAAGACGAGAAAAGGGCA+TGG | 0.651383 | 6_3:+42654554 | None:intergenic |
| AATACAAACCAAGTACAGAT+CGG | 0.672374 | 6_3:+42663473 | None:intergenic |
| CTTGGGTCAGCACTATAGCA+GGG | 0.686858 | 6_3:+42654587 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAATAGATATAAATTTA+TGG | + | chr6_3:42655837-42655856 | None:intergenic | 10.0% |
| !!! | TTAATTTTCTTTAACATTTT+AGG | - | chr6_3:42655882-42655901 | Msa0951550:intron | 10.0% |
| !!! | AGATTTTAAAACAATATTAT+AGG | - | chr6_3:42657164-42657183 | Msa0951550:intron | 10.0% |
| !!! | ATTATTATATAATTTTTGTG+TGG | - | chr6_3:42658232-42658251 | Msa0951550:intron | 10.0% |
| !!! | TTTTTTTTTTAACATTTGAT+TGG | - | chr6_3:42660970-42660989 | Msa0951550:intron | 10.0% |
| !!! | TTTTTTTTTAACATTTGATT+GGG | - | chr6_3:42660971-42660990 | Msa0951550:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660503-42660522 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660503-42660522 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660503-42660522 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660503-42660522 | None:intergenic | 100.0% |
| !!! | TAATTTTTGTAAGGAAAAAT+TGG | + | chr6_3:42654916-42654935 | None:intergenic | 15.0% |
| !!! | TGAAAGATTTAATTTTTGTA+AGG | + | chr6_3:42654925-42654944 | None:intergenic | 15.0% |
| !!! | TTTTGAATAGTGATTTTATA+AGG | - | chr6_3:42655205-42655224 | Msa0951550:intron | 15.0% |
| !!! | TTATTGATGATAATGAAATA+TGG | - | chr6_3:42655943-42655962 | Msa0951550:intron | 15.0% |
| !!! | TTCAATTTTTTTATGAAGAA+AGG | - | chr6_3:42656071-42656090 | Msa0951550:intron | 15.0% |
| !! | ATCAAGAAAATTATTACAAA+GGG | + | chr6_3:42657823-42657842 | None:intergenic | 15.0% |
| !! | AATCAAGAAAATTATTACAA+AGG | + | chr6_3:42657824-42657843 | None:intergenic | 15.0% |
| !! | AAAGTAGTAATAACAAAAAT+AGG | + | chr6_3:42658157-42658176 | None:intergenic | 15.0% |
| !!! | TAATGTATTAAATCAAGTTT+TGG | + | chr6_3:42659617-42659636 | None:intergenic | 15.0% |
| !!! | ATACATTAAATTTTAGTCTA+TGG | - | chr6_3:42659629-42659648 | Msa0951550:intron | 15.0% |
| !!! | TGAAAATGATATTTTGAATT+TGG | + | chr6_3:42660314-42660333 | None:intergenic | 15.0% |
| !! | TTCTAATAATAATTCAGATA+AGG | + | chr6_3:42660416-42660435 | None:intergenic | 15.0% |
| !! | GAAATTATTAATATCATTTC+GGG | + | chr6_3:42660913-42660932 | None:intergenic | 15.0% |
| !! | CGAAATTATTAATATCATTT+CGG | + | chr6_3:42660914-42660933 | None:intergenic | 15.0% |
| !! | ATATGATAATTTAGTGATTA+TGG | - | chr6_3:42661152-42661171 | Msa0951550:CDS | 15.0% |
| !! | TATGATAATTTAGTGATTAT+GGG | - | chr6_3:42661153-42661172 | Msa0951550:CDS | 15.0% |
| !!! | GAATTATGAACAAATTTTAT+TGG | - | chr6_3:42661925-42661944 | Msa0951550:intron | 15.0% |
| !!! | TTTTATCACAAAACAAATTA+TGG | + | chr6_3:42662501-42662520 | None:intergenic | 15.0% |
| !! | TGTATCAACATTAAAAATTA+TGG | + | chr6_3:42662652-42662671 | None:intergenic | 15.0% |
| !!! | CAAAGTTTGAAATAATTAAA+AGG | + | chr6_3:42663023-42663042 | None:intergenic | 15.0% |
| !!! | AGTAATTAATGGATATTTCT+TGG | - | chr6_3:42654569-42654588 | Msa0951550:CDS | 20.0% |
| !! | ATATTTCTTGGTTTAAATGA+TGG | - | chr6_3:42654581-42654600 | Msa0951550:CDS | 20.0% |
| !!! | TGGAATTTGTTGTTTTTTTT+GGG | - | chr6_3:42654628-42654647 | Msa0951550:CDS | 20.0% |
| !!! | CTTAGCTTCTTTTTTAAATT+AGG | - | chr6_3:42654673-42654692 | Msa0951550:CDS | 20.0% |
| !! | AAAATTCATATAGACTAAAG+AGG | + | chr6_3:42655077-42655096 | None:intergenic | 20.0% |
| !!! | TAGTCTATATGAATTTTTTC+AGG | - | chr6_3:42655080-42655099 | Msa0951550:intron | 20.0% |
| !! | TTTGAATTGATTGTAACTAT+AGG | - | chr6_3:42655165-42655184 | Msa0951550:intron | 20.0% |
| !! | TTGAATTGATTGTAACTATA+GGG | - | chr6_3:42655166-42655185 | Msa0951550:intron | 20.0% |
| !!! | ATTTTTATCATAGATATGAG+TGG | + | chr6_3:42655641-42655660 | None:intergenic | 20.0% |
| !! | AAAAAATCATGAAAAAAGCT+AGG | - | chr6_3:42656522-42656541 | Msa0951550:intron | 20.0% |
| !! | AAAAATCATGAAAAAAGCTA+GGG | - | chr6_3:42656523-42656542 | Msa0951550:intron | 20.0% |
| !! | TAATTCTAAACTTGAATTGA+AGG | - | chr6_3:42657076-42657095 | Msa0951550:intron | 20.0% |
| !! | AATTCTAAACTTGAATTGAA+GGG | - | chr6_3:42657077-42657096 | Msa0951550:intron | 20.0% |
| !! | TTGTTGAATTAAATATGACT+TGG | + | chr6_3:42657246-42657265 | None:intergenic | 20.0% |
| !! | TTAATTATACAGTTAAGTGA+AGG | - | chr6_3:42657289-42657308 | Msa0951550:intron | 20.0% |
| !! | AGTTAATTCTTAAGATATTG+AGG | + | chr6_3:42657335-42657354 | None:intergenic | 20.0% |
| !! | ATATCTTAAGAATTAACTCT+TGG | - | chr6_3:42657337-42657356 | Msa0951550:intron | 20.0% |
| !!! | TTGCTAGTTTTCTATAATAA+GGG | + | chr6_3:42658182-42658201 | None:intergenic | 20.0% |
| !!! | ATTATATAATTTTTGTGTGG+AGG | - | chr6_3:42658235-42658254 | Msa0951550:intron | 20.0% |
| !! | GTGATATTATATTATACATG+GGG | + | chr6_3:42658268-42658287 | None:intergenic | 20.0% |
| !! | CGTGATATTATATTATACAT+GGG | + | chr6_3:42658269-42658288 | None:intergenic | 20.0% |
| !! | TCGTGATATTATATTATACA+TGG | + | chr6_3:42658270-42658289 | None:intergenic | 20.0% |
| !!! | AGAAAAAAATATTTTGTGAC+CGG | + | chr6_3:42659933-42659952 | None:intergenic | 20.0% |
| !!! | TCACAAAATATTTTTTTCTC+AGG | - | chr6_3:42659934-42659953 | Msa0951550:intron | 20.0% |
| !! | TCTTAAAGAATAAGTCAATT+TGG | + | chr6_3:42660143-42660162 | None:intergenic | 20.0% |
| !!! | GTAATTGATTATTATTTTGC+AGG | - | chr6_3:42660718-42660737 | Msa0951550:intron | 20.0% |
| !!! | CTAAGTTTACTCAAAATTTT+AGG | - | chr6_3:42661048-42661067 | Msa0951550:intron | 20.0% |
| !!! | ATGAAACTAAATGTGTATTT+TGG | + | chr6_3:42661402-42661421 | None:intergenic | 20.0% |
| !!! | TTTCTTTCTTTTATGATGAA+AGG | - | chr6_3:42661789-42661808 | Msa0951550:intron | 20.0% |
| !! | AAATCAGCAAAATACAAATA+AGG | + | chr6_3:42661820-42661839 | None:intergenic | 20.0% |
| !!! | ATCACAAGAATACATTTTAT+TGG | - | chr6_3:42661861-42661880 | Msa0951550:intron | 20.0% |
| !!! | TCACAAGAATACATTTTATT+GGG | - | chr6_3:42661862-42661881 | Msa0951550:intron | 20.0% |
| !!! | ATAATCAAAGCATTCAAATT+TGG | + | chr6_3:42661967-42661986 | None:intergenic | 20.0% |
| !! | GAAAAAAAATATAGTGTAGA+TGG | - | chr6_3:42662888-42662907 | Msa0951550:intron | 20.0% |
| !! | AGTACTATTCTTAAATCTAA+TGG | - | chr6_3:42662925-42662944 | Msa0951550:intron | 20.0% |
| !! | TTCTTGATATACAAGTTAAA+GGG | + | chr6_3:42663185-42663204 | None:intergenic | 20.0% |
| !! | TTTCTTGATATACAAGTTAA+AGG | + | chr6_3:42663186-42663205 | None:intergenic | 20.0% |
| !! | TAATATAGTCACCTATATAT+TGG | + | chr6_3:42663292-42663311 | None:intergenic | 20.0% |
| ! | GTTTGTATTGCAGTAATTAA+TGG | - | chr6_3:42654558-42654577 | Msa0951550:CDS | 25.0% |
| !!! | GTGGAATTTGTTGTTTTTTT+TGG | - | chr6_3:42654627-42654646 | Msa0951550:CDS | 25.0% |
| !!! | GGAATTTGTTGTTTTTTTTG+GGG | - | chr6_3:42654629-42654648 | Msa0951550:CDS | 25.0% |
| !! | TAATAAGGTTTTCATTTGTG+AGG | - | chr6_3:42654845-42654864 | Msa0951550:intron | 25.0% |
| ! | GGTTAATTTATATACTTCAC+AGG | + | chr6_3:42654895-42654914 | None:intergenic | 25.0% |
| ! | CAAAATTTAGCTGAAATGAA+AGG | + | chr6_3:42655026-42655045 | None:intergenic | 25.0% |
| ! | TTATAGTCAGTATATCTGAA+TGG | - | chr6_3:42655115-42655134 | Msa0951550:intron | 25.0% |
| ! | TATAGTCAGTATATCTGAAT+GGG | - | chr6_3:42655116-42655135 | Msa0951550:intron | 25.0% |
| ! | ATTTAAAGATCATTGACAGT+AGG | - | chr6_3:42655915-42655934 | Msa0951550:intron | 25.0% |
| !! | GATGATAATGAAATATGGAT+TGG | - | chr6_3:42655948-42655967 | Msa0951550:intron | 25.0% |
| ! | TGCATTCTAAATGAACTTAA+TGG | + | chr6_3:42656155-42656174 | None:intergenic | 25.0% |
| !! | ATGTATGATGATTTTTGACA+TGG | + | chr6_3:42656297-42656316 | None:intergenic | 25.0% |
| ! | GTCAAAAATCATCATACATT+AGG | - | chr6_3:42656298-42656317 | Msa0951550:intron | 25.0% |
| !!! | TTGAATCACTTTTGTTTTCT+CGG | + | chr6_3:42656410-42656429 | None:intergenic | 25.0% |
| ! | CAAAAGTGATTCAATTTAAC+AGG | - | chr6_3:42656416-42656435 | Msa0951550:intron | 25.0% |
| ! | AAGCCTTAAATCAGAAATTT+CGG | - | chr6_3:42656471-42656490 | Msa0951550:intron | 25.0% |
| !! | TAGGAAAGTTGATTTCATTT+GGG | + | chr6_3:42656975-42656994 | None:intergenic | 25.0% |
| !! | ATAGGAAAGTTGATTTCATT+TGG | + | chr6_3:42656976-42656995 | None:intergenic | 25.0% |
| !!! | TGAGAAAATGCTTCATTTTT+GGG | - | chr6_3:42657001-42657020 | Msa0951550:intron | 25.0% |
| !! | TTTGTGCTTAATGCTTTTAA+TGG | + | chr6_3:42657135-42657154 | None:intergenic | 25.0% |
| !!! | TTTTCTTGATTTGCTTGAAA+AGG | - | chr6_3:42657833-42657852 | Msa0951550:intron | 25.0% |
| ! | TTGAATTCTACAAGATAACA+AGG | - | chr6_3:42657977-42657996 | Msa0951550:intron | 25.0% |
| ! | AGGAATTCCTTTAGTATATA+AGG | - | chr6_3:42657997-42658016 | Msa0951550:intron | 25.0% |
| ! | GGAATTCCTTTAGTATATAA+GGG | - | chr6_3:42657998-42658017 | Msa0951550:intron | 25.0% |
| !!! | TGCTAGTTTTCTATAATAAG+GGG | + | chr6_3:42658181-42658200 | None:intergenic | 25.0% |
| !!! | GTTGCTAGTTTTCTATAATA+AGG | + | chr6_3:42658183-42658202 | None:intergenic | 25.0% |
| ! | TCAAGAGCTATATAATAACT+GGG | - | chr6_3:42658206-42658225 | Msa0951550:intron | 25.0% |
| !! | AGATTTTATAGTAGATGGAT+TGG | + | chr6_3:42658343-42658362 | None:intergenic | 25.0% |
| !! | TGGATAGATTTTATAGTAGA+TGG | + | chr6_3:42658348-42658367 | None:intergenic | 25.0% |
| ! | ATTTGGGCTGTATTTATATT+CGG | - | chr6_3:42658769-42658788 | Msa0951550:intron | 25.0% |
| ! | CATGATAACACCTTTATAAA+AGG | + | chr6_3:42658893-42658912 | None:intergenic | 25.0% |
| ! | ATTGGATGTTGAAACAAAAT+GGG | + | chr6_3:42659734-42659753 | None:intergenic | 25.0% |
| !! | TCAGAATTTTCAAATTCAAG+CGG | + | chr6_3:42659764-42659783 | None:intergenic | 25.0% |
| !! | TGATTTTTGCAATCAACTAT+AGG | - | chr6_3:42659807-42659826 | Msa0951550:intron | 25.0% |
| !! | GATTTTTGCAATCAACTATA+GGG | - | chr6_3:42659808-42659827 | Msa0951550:intron | 25.0% |
| ! | GAGAAGATCATTTATTCAAT+AGG | + | chr6_3:42659985-42660004 | None:intergenic | 25.0% |
| !!! | TAATAATTTTGATGTGTCCT+AGG | + | chr6_3:42660480-42660499 | None:intergenic | 25.0% |
| ! | ATTATATGATCTCAGAAACT+CGG | + | chr6_3:42660538-42660557 | None:intergenic | 25.0% |
| ! | TCTCCGAATATGATTTATAT+CGG | - | chr6_3:42660601-42660620 | Msa0951550:intron | 25.0% |
| !! | TCTTATTTATGCTTATCAGA+CGG | - | chr6_3:42660651-42660670 | Msa0951550:intron | 25.0% |
| ! | TTATTTCAGAGATGCTATAT+AGG | - | chr6_3:42660750-42660769 | Msa0951550:intron | 25.0% |
| ! | TAGAGATCAAGTAAACTTAT+CGG | + | chr6_3:42660807-42660826 | None:intergenic | 25.0% |
| !! | GAAATTTGAAATGCTAAGTT+TGG | - | chr6_3:42660993-42661012 | Msa0951550:intron | 25.0% |
| ! | ATATTGCAACATTGTCAAAA+CGG | + | chr6_3:42661186-42661205 | None:intergenic | 25.0% |
| !! | AGTCTCATATGATCAAATTT+TGG | + | chr6_3:42661288-42661307 | None:intergenic | 25.0% |
| ! | GATTAAAATTGTGAACTAGT+AGG | - | chr6_3:42661506-42661525 | Msa0951550:intron | 25.0% |
| !! | TTGCATCTCAATTCAATTTT+AGG | + | chr6_3:42661548-42661567 | None:intergenic | 25.0% |
| ! | TAAAATTGAATTGAGATGCA+AGG | - | chr6_3:42661547-42661566 | Msa0951550:intron | 25.0% |
| ! | AGATACATTCTAATTGTCAT+GGG | + | chr6_3:42661586-42661605 | None:intergenic | 25.0% |
| ! | TAGATACATTCTAATTGTCA+TGG | + | chr6_3:42661587-42661606 | None:intergenic | 25.0% |
| ! | ACTTAGCATTAAGATTAAAG+TGG | - | chr6_3:42661652-42661671 | Msa0951550:intron | 25.0% |
| ! | AAAGCTGCAAAATACAAATA+AGG | - | chr6_3:42661675-42661694 | Msa0951550:intron | 25.0% |
| ! | CATTCAAATTTGGAAATGAT+TGG | + | chr6_3:42661957-42661976 | None:intergenic | 25.0% |
| !!! | TCTTTTGATCATTGTTGTTA+TGG | - | chr6_3:42661986-42662005 | Msa0951550:intron | 25.0% |
| ! | AATTGACATCAGAATTAAGA+GGG | + | chr6_3:42662385-42662404 | None:intergenic | 25.0% |
| ! | AAATTGACATCAGAATTAAG+AGG | + | chr6_3:42662386-42662405 | None:intergenic | 25.0% |
| ! | TTCTGAGCATAATTTGAATT+GGG | + | chr6_3:42662439-42662458 | None:intergenic | 25.0% |
| ! | TTTCTGAGCATAATTTGAAT+TGG | + | chr6_3:42662440-42662459 | None:intergenic | 25.0% |
| !!! | ACTCAGAACAAATTTTTTGA+CGG | + | chr6_3:42662615-42662634 | None:intergenic | 25.0% |
| ! | TAAGAACCATAGTAAAATCT+GGG | + | chr6_3:42662703-42662722 | None:intergenic | 25.0% |
| ! | AAACTTTGTACACTCTTTAT+AGG | - | chr6_3:42663035-42663054 | Msa0951550:intron | 25.0% |
| ! | ATATACAAGTTAAAGGGAAT+AGG | + | chr6_3:42663179-42663198 | None:intergenic | 25.0% |
| ! | TGTACATAAATTTCTACAAC+AGG | - | chr6_3:42663217-42663236 | Msa0951550:intron | 25.0% |
| !!! | ATTTTTCTAGTACTATTGCT+TGG | + | chr6_3:42663524-42663543 | None:intergenic | 25.0% |
| AATACAAACCAAGTACAGAT+CGG | + | chr6_3:42654547-42654566 | None:intergenic | 30.0% | |
| !!! | TGTTGTTTTTTTTGGGGTAT+AGG | - | chr6_3:42654635-42654654 | Msa0951550:CDS | 30.0% |
| !!! | GTTGTTTTTTTTGGGGTATA+GGG | - | chr6_3:42654636-42654655 | Msa0951550:CDS | 30.0% |
| ! | TTTTCATTTGTGAGGTTAGA+TGG | - | chr6_3:42654853-42654872 | Msa0951550:intron | 30.0% |
| ! | TAGCTTTTTACTGAAATCTG+CGG | - | chr6_3:42654966-42654985 | Msa0951550:intron | 30.0% |
| TCAAAATAGAAAGATCAGCA+TGG | + | chr6_3:42655280-42655299 | None:intergenic | 30.0% | |
| !! | TGCTGATCTTTCTATTTTGA+AGG | - | chr6_3:42655280-42655299 | Msa0951550:intron | 30.0% |
| ATATGAGTGGTTATTTGGAT+GGG | + | chr6_3:42655628-42655647 | None:intergenic | 30.0% | |
| CATAGATATGAGTGGTTATT+TGG | + | chr6_3:42655633-42655652 | None:intergenic | 30.0% | |
| GCAGTTAAAACTGAAAAGTA+AGG | - | chr6_3:42655663-42655682 | Msa0951550:intron | 30.0% | |
| !! | TTAGTTTTCCCATCTCTTTT+AGG | + | chr6_3:42655989-42656008 | None:intergenic | 30.0% |
| TTGTCATTCAAATAACCAAC+AGG | + | chr6_3:42656050-42656069 | None:intergenic | 30.0% | |
| AAAGGAGAAAGAAATGTTCT+CGG | - | chr6_3:42656089-42656108 | Msa0951550:intron | 30.0% | |
| AAACTCCTATATGCCAAAAA+TGG | + | chr6_3:42656121-42656140 | None:intergenic | 30.0% | |
| TATAGTATACCTCAGCATTA+CGG | - | chr6_3:42656207-42656226 | Msa0951550:intron | 30.0% | |
| AGAATAATTATTCACACTGG+AGG | + | chr6_3:42656253-42656272 | None:intergenic | 30.0% | |
| CAGAGAATAATTATTCACAC+TGG | + | chr6_3:42656256-42656275 | None:intergenic | 30.0% | |
| ! | ATGATTTTTGACATGGTTGA+TGG | + | chr6_3:42656290-42656309 | None:intergenic | 30.0% |
| AAATCATCATACATTAGGTG+AGG | - | chr6_3:42656303-42656322 | Msa0951550:intron | 30.0% | |
| ACTAACTCAGACATAGTTAT+TGG | - | chr6_3:42656345-42656364 | Msa0951550:intron | 30.0% | |
| AATATGTTGACGTTCATAAC+AGG | - | chr6_3:42656730-42656749 | Msa0951550:intron | 30.0% | |
| GATACTATACACAAGTGATA+TGG | - | chr6_3:42656765-42656784 | Msa0951550:intron | 30.0% | |
| ! | CTGAGAAAATGCTTCATTTT+TGG | - | chr6_3:42657000-42657019 | Msa0951550:intron | 30.0% |
| ! | ATATAAGGCTGGAATTTTCA+TGG | + | chr6_3:42657203-42657222 | None:intergenic | 30.0% |
| TGGGCTATATTTCTTATGAT+GGG | + | chr6_3:42657363-42657382 | None:intergenic | 30.0% | |
| TTGGGCTATATTTCTTATGA+TGG | + | chr6_3:42657364-42657383 | None:intergenic | 30.0% | |
| TATATGCTTAATCTCGGATA+AGG | + | chr6_3:42657735-42657754 | None:intergenic | 30.0% | |
| AACAGCTATATGCTTAATCT+CGG | + | chr6_3:42657741-42657760 | None:intergenic | 30.0% | |
| ATTATTACAAAGGGTTTGAG+AGG | + | chr6_3:42657814-42657833 | None:intergenic | 30.0% | |
| TGTTGGAGAGTTTAGTAAAA+CGG | + | chr6_3:42657859-42657878 | None:intergenic | 30.0% | |
| ! | TTTTACTAAACTCTCCAACA+TGG | - | chr6_3:42657859-42657878 | Msa0951550:intron | 30.0% |
| AAAACAATTAGCATCCATGT+TGG | + | chr6_3:42657876-42657895 | None:intergenic | 30.0% | |
| !!! | TTGTTTGTTTTTAACCATCC+AGG | - | chr6_3:42657896-42657915 | Msa0951550:intron | 30.0% |
| !!! | TGTTTGTTTTTAACCATCCA+GGG | - | chr6_3:42657897-42657916 | Msa0951550:intron | 30.0% |
| AACTTCAAAGTTATCTTGAG+AGG | - | chr6_3:42657941-42657960 | Msa0951550:intron | 30.0% | |
| AAGTTATCTTGAGAGGAAAA+TGG | - | chr6_3:42657948-42657967 | Msa0951550:intron | 30.0% | |
| AAGCAACCCTTATATACTAA+AGG | + | chr6_3:42658007-42658026 | None:intergenic | 30.0% | |
| CAAGATCAAACGACTTAAAT+AGG | + | chr6_3:42658070-42658089 | None:intergenic | 30.0% | |
| CTCAAGAGCTATATAATAAC+TGG | - | chr6_3:42658205-42658224 | Msa0951550:intron | 30.0% | |
| CAAGAGCTATATAATAACTG+GGG | - | chr6_3:42658207-42658226 | Msa0951550:intron | 30.0% | |
| TTGGATAGATATGAATTTGG+TGG | + | chr6_3:42658324-42658343 | None:intergenic | 30.0% | |
| GGATTGGATAGATATGAATT+TGG | + | chr6_3:42658327-42658346 | None:intergenic | 30.0% | |
| ! | TGTTTTATGCGATGATTGTA+CGG | - | chr6_3:42658405-42658424 | Msa0951550:intron | 30.0% |
| TCAATTTATAACTGGAACAG+CGG | - | chr6_3:42658440-42658459 | Msa0951550:intron | 30.0% | |
| ATGTTACAATTCGTTTGAAC+TGG | - | chr6_3:42658678-42658697 | Msa0951550:intron | 30.0% | |
| TGTATTTATATTCGGCCTAA+GGG | - | chr6_3:42658777-42658796 | Msa0951550:intron | 30.0% | |
| TAGGTTAACAAAATTGTTCG+AGG | - | chr6_3:42658917-42658936 | Msa0951550:intron | 30.0% | |
| ! | GAGGAAAATGCTCATTTTAA+TGG | - | chr6_3:42658936-42658955 | Msa0951550:intron | 30.0% |
| !! | CATTTTAATGGTAAAGCCTT+CGG | - | chr6_3:42658948-42658967 | Msa0951550:intron | 30.0% |
| ! | TGATTAAGTAGAGAGCATAA+AGG | - | chr6_3:42659036-42659055 | Msa0951550:intron | 30.0% |
| TTCCTCAGAACTTATCATAT+CGG | - | chr6_3:42659059-42659078 | Msa0951550:intron | 30.0% | |
| ACACGTTAGGATTAAATCAA+CGG | + | chr6_3:42659419-42659438 | None:intergenic | 30.0% | |
| !! | AAGAATTTTGAAGACTCTGA+AGG | + | chr6_3:42659442-42659461 | None:intergenic | 30.0% |
| ACAACATATACAATAGCACT+TGG | + | chr6_3:42659587-42659606 | None:intergenic | 30.0% | |
| ! | AATACCTTGTTATCATCAAC+AGG | - | chr6_3:42659696-42659715 | Msa0951550:intron | 30.0% |
| !! | AATACCTGTTGATGATAACA+AGG | + | chr6_3:42659703-42659722 | None:intergenic | 30.0% |
| CATTGGATGTTGAAACAAAA+TGG | + | chr6_3:42659735-42659754 | None:intergenic | 30.0% | |
| ! | AAAAAATATTTTGTGACCGG+AGG | + | chr6_3:42659930-42659949 | None:intergenic | 30.0% |
| TCTTCTCTTATATTCGAGAT+AGG | - | chr6_3:42659998-42660017 | Msa0951550:intron | 30.0% | |
| !!! | ATTTTGACTCTTTCTGATTG+AGG | - | chr6_3:42660036-42660055 | Msa0951550:intron | 30.0% |
| !! | TTTTGACTCTTTCTGATTGA+GGG | - | chr6_3:42660037-42660056 | Msa0951550:intron | 30.0% |
| ! | AGATCACAATGCAATTTTCA+TGG | + | chr6_3:42660392-42660411 | None:intergenic | 30.0% |
| ! | ATCTTCGCACTTTTCTTTTT+TGG | - | chr6_3:42660441-42660460 | Msa0951550:intron | 30.0% |
| CTCCGAATATGATTTATATC+GGG | - | chr6_3:42660602-42660621 | Msa0951550:intron | 30.0% | |
| TCCGAATATGATTTATATCG+GGG | - | chr6_3:42660603-42660622 | Msa0951550:intron | 30.0% | |
| TCCCCGATATAAATCATATT+CGG | + | chr6_3:42660607-42660626 | None:intergenic | 30.0% | |
| CAAATCTCTCATGAGTTATT+AGG | + | chr6_3:42660630-42660649 | None:intergenic | 30.0% | |
| AATCAATTACACAATACCTG+AGG | + | chr6_3:42660708-42660727 | None:intergenic | 30.0% | |
| ! | ATCAAGTAAACTTATCGGTT+AGG | + | chr6_3:42660802-42660821 | None:intergenic | 30.0% |
| CTGACTTACTATTTGAATCT+AGG | - | chr6_3:42661316-42661335 | Msa0951550:intron | 30.0% | |
| ACTTACTATTTGAATCTAGG+TGG | - | chr6_3:42661319-42661338 | Msa0951550:intron | 30.0% | |
| ! | ATTTAGCTGTTAGTTCTCTT+AGG | - | chr6_3:42661438-42661457 | Msa0951550:intron | 30.0% |
| CTGCAAAATACAAATAAGGT+GGG | - | chr6_3:42661679-42661698 | Msa0951550:intron | 30.0% | |
| !!! | CATTTTCTCTGTTTTGATGA+AGG | + | chr6_3:42661707-42661726 | None:intergenic | 30.0% |
| GAGATCTTTCACTATAGTAT+TGG | - | chr6_3:42661884-42661903 | Msa0951550:intron | 30.0% | |
| ! | TTTGATCATTGTTGTTATGG+TGG | - | chr6_3:42661989-42662008 | Msa0951550:intron | 30.0% |
| AGAAAATACTTTGTCATGGT+GGG | + | chr6_3:42662043-42662062 | None:intergenic | 30.0% | |
| TCTGACCATTAAATCAAATG+AGG | - | chr6_3:42662060-42662079 | Msa0951550:intron | 30.0% | |
| ! | GTGTTCCTCATTTGATTTAA+TGG | + | chr6_3:42662068-42662087 | None:intergenic | 30.0% |
| ! | GAGAACTTTTGAATCAACAA+AGG | + | chr6_3:42662216-42662235 | None:intergenic | 30.0% |
| GTGAAAGAGAAAGAAAGAAA+AGG | + | chr6_3:42662240-42662259 | None:intergenic | 30.0% | |
| ACATTGATGTAATTAGGGAT+TGG | + | chr6_3:42662325-42662344 | None:intergenic | 30.0% | |
| TGGTGACATTGATGTAATTA+GGG | + | chr6_3:42662330-42662349 | None:intergenic | 30.0% | |
| ATGGTGACATTGATGTAATT+AGG | + | chr6_3:42662331-42662350 | None:intergenic | 30.0% | |
| !! | CTTTAAAGCATGTTGAAGAA+TGG | + | chr6_3:42662350-42662369 | None:intergenic | 30.0% |
| TTGGGGTAAATAACTGAATA+AGG | + | chr6_3:42662421-42662440 | None:intergenic | 30.0% | |
| TCTGAGCATAATTTGAATTG+GGG | + | chr6_3:42662438-42662457 | None:intergenic | 30.0% | |
| ! | TAAAATCTGGGTTGACAATT+CGG | + | chr6_3:42662691-42662710 | None:intergenic | 30.0% |
| GTAAGAACCATAGTAAAATC+TGG | + | chr6_3:42662704-42662723 | None:intergenic | 30.0% | |
| GGAGAATATCAACAAGAATT+AGG | + | chr6_3:42662726-42662745 | None:intergenic | 30.0% | |
| !! | GAATAGTACTGATCTTATCA+TGG | + | chr6_3:42662915-42662934 | None:intergenic | 30.0% |
| AAAAAAAACCTTTCCCATTG+TGG | - | chr6_3:42662949-42662968 | Msa0951550:intron | 30.0% | |
| AAAAAAACCTTTCCCATTGT+GGG | - | chr6_3:42662950-42662969 | Msa0951550:intron | 30.0% | |
| !! | TTTGTTGTTGAACTCCATAA+GGG | + | chr6_3:42663244-42663263 | None:intergenic | 30.0% |
| !! | ATTTGTTGTTGAACTCCATA+AGG | + | chr6_3:42663245-42663264 | None:intergenic | 30.0% |
| TGAGTGTCAAACCAATATAT+AGG | - | chr6_3:42663278-42663297 | Msa0951550:intron | 30.0% | |
| TAGGTGACTATATTAGTTGA+AGG | - | chr6_3:42663297-42663316 | Msa0951550:intron | 30.0% | |
| AAATTTCAAATGACTCCAGA+AGG | - | chr6_3:42663325-42663344 | Msa0951550:intron | 30.0% | |
| ATGGTAAGATTGATCGAGAT+TGG | - | chr6_3:42654600-42654619 | Msa0951550:CDS | 35.0% | |
| !!! | TTTTTTTTGGGGTATAGGGT+CGG | - | chr6_3:42654640-42654659 | Msa0951550:CDS | 35.0% |
| ACCTTATTAGAGCTCTGTTT+GGG | + | chr6_3:42654834-42654853 | None:intergenic | 35.0% | |
| AACCTTATTAGAGCTCTGTT+TGG | + | chr6_3:42654835-42654854 | None:intergenic | 35.0% | |
| ATTTGTGAGGTTAGATGGTT+TGG | - | chr6_3:42654858-42654877 | Msa0951550:intron | 35.0% | |
| GGCTAGAAATATTCTTTCTG+TGG | + | chr6_3:42655254-42655273 | None:intergenic | 35.0% | |
| GATATGAGTGGTTATTTGGA+TGG | + | chr6_3:42655629-42655648 | None:intergenic | 35.0% | |
| CACAAGAAATTCTAGACTTG+TGG | + | chr6_3:42655769-42655788 | None:intergenic | 35.0% | |
| TTGCAGCTTCTTACTGAAAT+CGG | + | chr6_3:42655792-42655811 | None:intergenic | 35.0% | |
| ATGCTAAAGCCTAAAAGAGA+TGG | - | chr6_3:42655977-42655996 | Msa0951550:intron | 35.0% | |
| TGCTAAAGCCTAAAAGAGAT+GGG | - | chr6_3:42655978-42655997 | Msa0951550:intron | 35.0% | |
| GTTGCATTGAAGATCACATT+TGG | + | chr6_3:42656012-42656031 | None:intergenic | 35.0% | |
| !!! | ACTCACCATTTTTGGCATAT+AGG | - | chr6_3:42656113-42656132 | Msa0951550:intron | 35.0% |
| GGTATACTATATGTCATCAG+AGG | + | chr6_3:42656198-42656217 | None:intergenic | 35.0% | |
| TAATTATTCACACTGGAGGA+AGG | + | chr6_3:42656249-42656268 | None:intergenic | 35.0% | |
| TTACGTCTACATGTTTGTGT+CGG | + | chr6_3:42656379-42656398 | None:intergenic | 35.0% | |
| GCACCGAAATTTCTGATTTA+AGG | + | chr6_3:42656477-42656496 | None:intergenic | 35.0% | |
| TTCGAAGTTAACACCAGTTT+AGG | - | chr6_3:42656574-42656593 | Msa0951550:intron | 35.0% | |
| !!! | CCTTTTTTTCAGTCGACTTT+CGG | + | chr6_3:42656896-42656915 | None:intergenic | 35.0% |
| CGAAAGTCGACTGAAAAAAA+GGG | - | chr6_3:42656894-42656913 | Msa0951550:intron | 35.0% | |
| GAAAAAAAGGGATCAGTAAG+TGG | - | chr6_3:42656906-42656925 | Msa0951550:intron | 35.0% | |
| ! | AAGCATTTTCTCAGCTCAAT+AGG | + | chr6_3:42656994-42657013 | None:intergenic | 35.0% |
| TTTCGTGTTTCTCTGTTGTA+TGG | - | chr6_3:42657040-42657059 | Msa0951550:intron | 35.0% | |
| !! | CAATGCCTTTCTGGAATATA+AGG | + | chr6_3:42657218-42657237 | None:intergenic | 35.0% |
| TCATGTGACTATGTGATGTT+GGG | + | chr6_3:42657412-42657431 | None:intergenic | 35.0% | |
| ! | ATACTGACTAAGTCTCAAGA+GGG | - | chr6_3:42657632-42657651 | Msa0951550:intron | 35.0% |
| TTGTATTAGCTATCTGATGC+TGG | - | chr6_3:42658028-42658047 | Msa0951550:intron | 35.0% | |
| ! | TCACGAAAATAGTTTCGAGT+AGG | - | chr6_3:42658284-42658303 | Msa0951550:intron | 35.0% |
| ! | CACGAAAATAGTTTCGAGTA+GGG | - | chr6_3:42658285-42658304 | Msa0951550:intron | 35.0% |
| ! | ACGAAAATAGTTTCGAGTAG+GGG | - | chr6_3:42658286-42658305 | Msa0951550:intron | 35.0% |
| GGAGTGTGTCAATTTATAAC+TGG | - | chr6_3:42658432-42658451 | Msa0951550:intron | 35.0% | |
| CAATTTATAACTGGAACAGC+GGG | - | chr6_3:42658441-42658460 | Msa0951550:intron | 35.0% | |
| AATTTATAACTGGAACAGCG+GGG | - | chr6_3:42658442-42658461 | Msa0951550:intron | 35.0% | |
| TCAGTAAGAGATCAGAATGA+GGG | - | chr6_3:42658496-42658515 | Msa0951550:intron | 35.0% | |
| AACACCCACCTCTATATAAA+GGG | + | chr6_3:42658564-42658583 | None:intergenic | 35.0% | |
| AAACACCCACCTCTATATAA+AGG | + | chr6_3:42658565-42658584 | None:intergenic | 35.0% | |
| ATGTTGCCAAATGCGAAATT+TGG | - | chr6_3:42658752-42658771 | Msa0951550:intron | 35.0% | |
| TGTTGCCAAATGCGAAATTT+GGG | - | chr6_3:42658753-42658772 | Msa0951550:intron | 35.0% | |
| CTGTATTTATATTCGGCCTA+AGG | - | chr6_3:42658776-42658795 | Msa0951550:intron | 35.0% | |
| ! | CTAGATTGTCTAAAACCCTT+AGG | + | chr6_3:42658795-42658814 | None:intergenic | 35.0% |
| ! | CTTGTGGAGACCTTTTATAA+AGG | - | chr6_3:42658880-42658899 | Msa0951550:intron | 35.0% |
| !! | AAAGGTGTTATCATGTGCTT+AGG | - | chr6_3:42658898-42658917 | Msa0951550:intron | 35.0% |
| CTACTTAATCAGATAAACCG+TGG | + | chr6_3:42659027-42659046 | None:intergenic | 35.0% | |
| ! | CAGAGTTTTCTATCCTTAAG+AGG | - | chr6_3:42659515-42659534 | Msa0951550:intron | 35.0% |
| ! | CTGAAAATTTTCGCCTCTTA+AGG | + | chr6_3:42659531-42659550 | None:intergenic | 35.0% |
| ! | TTTTCAAATTCAAGCGGCAA+AGG | + | chr6_3:42659758-42659777 | None:intergenic | 35.0% |
| TCTCTTATATTCGAGATAGG+AGG | - | chr6_3:42660001-42660020 | Msa0951550:intron | 35.0% | |
| GAAGCAAACTTTGAACCATT+GGG | + | chr6_3:42660063-42660082 | None:intergenic | 35.0% | |
| AGAAGCAAACTTTGAACCAT+TGG | + | chr6_3:42660064-42660083 | None:intergenic | 35.0% | |
| GTTTACTGGGGACTAAAAAT+AGG | + | chr6_3:42660197-42660216 | None:intergenic | 35.0% | |
| CCTATAAATGACGTTTACTG+GGG | + | chr6_3:42660209-42660228 | None:intergenic | 35.0% | |
| GCCTATAAATGACGTTTACT+GGG | + | chr6_3:42660210-42660229 | None:intergenic | 35.0% | |
| AGCCTATAAATGACGTTTAC+TGG | + | chr6_3:42660211-42660230 | None:intergenic | 35.0% | |
| ATGAGATGTGAAAGATTGTG+AGG | + | chr6_3:42660267-42660286 | None:intergenic | 35.0% | |
| TTTCAGAGATGCTATATAGG+TGG | - | chr6_3:42660753-42660772 | Msa0951550:intron | 35.0% | |
| GCTGCAAAATACAAATAAGG+TGG | - | chr6_3:42661678-42661697 | Msa0951550:intron | 35.0% | |
| ! | TTGTTGTTATGGTGGCATTT+AGG | - | chr6_3:42661997-42662016 | Msa0951550:intron | 35.0% |
| TGTTGTTATGGTGGCATTTA+GGG | - | chr6_3:42661998-42662017 | Msa0951550:intron | 35.0% | |
| CAGAAAATACTTTGTCATGG+TGG | + | chr6_3:42662044-42662063 | None:intergenic | 35.0% | |
| GGTCAGAAAATACTTTGTCA+TGG | + | chr6_3:42662047-42662066 | None:intergenic | 35.0% | |
| TAGAGAGTTTGGACAGTAAT+AGG | + | chr6_3:42662190-42662209 | None:intergenic | 35.0% | |
| AACAAAGGAGATAGAGAGTT+TGG | + | chr6_3:42662201-42662220 | None:intergenic | 35.0% | |
| TTGAGAACAGAGACAAGTTA+GGG | + | chr6_3:42662290-42662309 | None:intergenic | 35.0% | |
| TTTGAGAACAGAGACAAGTT+AGG | + | chr6_3:42662291-42662310 | None:intergenic | 35.0% | |
| GATGTAATTAGGGATTGGAA+GGG | + | chr6_3:42662320-42662339 | None:intergenic | 35.0% | |
| TGATGTAATTAGGGATTGGA+AGG | + | chr6_3:42662321-42662340 | None:intergenic | 35.0% | |
| AATGATGTTGAAGTCAGTGA+TGG | - | chr6_3:42662558-42662577 | Msa0951550:intron | 35.0% | |
| ! | TGTCAACCCAGATTTTACTA+TGG | - | chr6_3:42662694-42662713 | Msa0951550:intron | 35.0% |
| ACATTCAACCAAAACCTTAG+TGG | + | chr6_3:42662771-42662790 | None:intergenic | 35.0% | |
| CCATCAATACTCATGAATTG+TGG | + | chr6_3:42662836-42662855 | None:intergenic | 35.0% | |
| !! | CCACAATTCATGAGTATTGA+TGG | - | chr6_3:42662833-42662852 | Msa0951550:intron | 35.0% |
| !! | ATTCATGAGTATTGATGGTG+AGG | - | chr6_3:42662838-42662857 | Msa0951550:intron | 35.0% |
| GTGACTATATTAGTTGAAGG+AGG | - | chr6_3:42663300-42663319 | Msa0951550:intron | 35.0% | |
| TATCATACACGTTAACCTTC+TGG | + | chr6_3:42663343-42663362 | None:intergenic | 35.0% | |
| AGAAGGTTAACGTGTATGAT+AGG | - | chr6_3:42663342-42663361 | Msa0951550:intron | 35.0% | |
| GTTAACGTGTATGATAGGTT+TGG | - | chr6_3:42663347-42663366 | Msa0951550:intron | 35.0% | |
| ! | ATTGATCGAGATTGGTTGAG+TGG | - | chr6_3:42654608-42654627 | Msa0951550:CDS | 40.0% |
| TATTAGAGCTCTGTTTGGGA+GGG | + | chr6_3:42654830-42654849 | None:intergenic | 40.0% | |
| TTATTAGAGCTCTGTTTGGG+AGG | + | chr6_3:42654831-42654850 | None:intergenic | 40.0% | |
| ! | TCCCAAACAGAGCTCTAATA+AGG | - | chr6_3:42654830-42654849 | Msa0951550:intron | 40.0% |
| TCTGTGGCTGATAAAGTGTA+AGG | + | chr6_3:42655238-42655257 | None:intergenic | 40.0% | |
| ATAGAAAGATCAGCATGGCA+TGG | + | chr6_3:42655275-42655294 | None:intergenic | 40.0% | |
| ! | TTCTCGGTACTCACCATTTT+TGG | - | chr6_3:42656105-42656124 | Msa0951550:intron | 40.0% |
| ! | CAATTTAACAGGTGTTGTGC+AGG | - | chr6_3:42656427-42656446 | Msa0951550:intron | 40.0% |
| CCGAAAGTCGACTGAAAAAA+AGG | - | chr6_3:42656893-42656912 | Msa0951550:intron | 40.0% | |
| !! | AATGCTTCATTTTTGGGCCT+CGG | - | chr6_3:42657007-42657026 | Msa0951550:intron | 40.0% |
| ! | TCCAGCCTTATATTCCAGAA+AGG | - | chr6_3:42657210-42657229 | Msa0951550:intron | 40.0% |
| ATGTTGGGCTATGTCCATTA+TGG | + | chr6_3:42657397-42657416 | None:intergenic | 40.0% | |
| CTCATGTGACTATGTGATGT+TGG | + | chr6_3:42657413-42657432 | None:intergenic | 40.0% | |
| CACATAGTCACATGAGAGAA+AGG | - | chr6_3:42657417-42657436 | Msa0951550:intron | 40.0% | |
| AGAAAGGTGACAGCTTAAGT+TGG | - | chr6_3:42657433-42657452 | Msa0951550:intron | 40.0% | |
| GAAAGGTGACAGCTTAAGTT+GGG | - | chr6_3:42657434-42657453 | Msa0951550:intron | 40.0% | |
| ! | AAAGGTGACAGCTTAAGTTG+GGG | - | chr6_3:42657435-42657454 | Msa0951550:intron | 40.0% |
| GCATACCGGGAAAAAAATCT+CGG | - | chr6_3:42657498-42657517 | Msa0951550:intron | 40.0% | |
| TATCACGTGTTTATCCTGTG+GGG | + | chr6_3:42657615-42657634 | None:intergenic | 40.0% | |
| GTATCACGTGTTTATCCTGT+GGG | + | chr6_3:42657616-42657635 | None:intergenic | 40.0% | |
| AGTATCACGTGTTTATCCTG+TGG | + | chr6_3:42657617-42657636 | None:intergenic | 40.0% | |
| ! | GATACTGACTAAGTCTCAAG+AGG | - | chr6_3:42657631-42657650 | Msa0951550:intron | 40.0% |
| !!! | TTGTTTTTAACCATCCAGGG+AGG | - | chr6_3:42657900-42657919 | Msa0951550:intron | 40.0% |
| AAGTTTGCACTGCCTTACTA+TGG | + | chr6_3:42657926-42657945 | None:intergenic | 40.0% | |
| CTATCTGATGCTGGAAAACA+AGG | - | chr6_3:42658037-42658056 | Msa0951550:intron | 40.0% | |
| TGATGCTGGAAAACAAGGAA+TGG | - | chr6_3:42658042-42658061 | Msa0951550:intron | 40.0% | |
| GATGCTGGAAAACAAGGAAT+GGG | - | chr6_3:42658043-42658062 | Msa0951550:intron | 40.0% | |
| ATGCTGGAAAACAAGGAATG+GGG | - | chr6_3:42658044-42658063 | Msa0951550:intron | 40.0% | |
| TTTATGCGATGATTGTACGG+TGG | - | chr6_3:42658408-42658427 | Msa0951550:intron | 40.0% | |
| ATTTATAACTGGAACAGCGG+GGG | - | chr6_3:42658443-42658462 | Msa0951550:intron | 40.0% | |
| GTCAGTAAGAGATCAGAATG+AGG | - | chr6_3:42658495-42658514 | Msa0951550:intron | 40.0% | |
| GAAGAGTCCCCTTTATATAG+AGG | - | chr6_3:42658553-42658572 | Msa0951550:intron | 40.0% | |
| AGTCCCCTTTATATAGAGGT+GGG | - | chr6_3:42658557-42658576 | Msa0951550:intron | 40.0% | |
| ACACCCACCTCTATATAAAG+GGG | + | chr6_3:42658563-42658582 | None:intergenic | 40.0% | |
| ! | TTCCTCGGAAGTGTAACTAT+TGG | - | chr6_3:42658627-42658646 | Msa0951550:intron | 40.0% |
| ! | TCCTCGGAAGTGTAACTATT+GGG | - | chr6_3:42658628-42658647 | Msa0951550:intron | 40.0% |
| TACAGCCCAAATTTCGCATT+TGG | + | chr6_3:42658761-42658780 | None:intergenic | 40.0% | |
| TGATGACTTTGAATGAGCGA+GGG | - | chr6_3:42658852-42658871 | Msa0951550:intron | 40.0% | |
| CACCGATATGATAAGTTCTG+AGG | + | chr6_3:42659064-42659083 | None:intergenic | 40.0% | |
| TCGGTGACTATGTTGATATC+AGG | - | chr6_3:42659078-42659097 | Msa0951550:intron | 40.0% | |
| CGGTGACTATGTTGATATCA+GGG | - | chr6_3:42659079-42659098 | Msa0951550:intron | 40.0% | |
| TCTGTCTATCGAGCATATTC+GGG | + | chr6_3:42659142-42659161 | None:intergenic | 40.0% | |
| CTCTGTCTATCGAGCATATT+CGG | + | chr6_3:42659143-42659162 | None:intergenic | 40.0% | |
| AATATGCTCGATAGACAGAG+TGG | - | chr6_3:42659143-42659162 | Msa0951550:intron | 40.0% | |
| !! | ACATTACTAGCCTTTACACG+TGG | + | chr6_3:42659337-42659356 | None:intergenic | 40.0% |
| AACGGTGATGATCATACCTT+GGG | + | chr6_3:42659401-42659420 | None:intergenic | 40.0% | |
| TGAAGAAGTTTAGCCTCTGA+AGG | + | chr6_3:42659497-42659516 | None:intergenic | 40.0% | |
| CAATCAACTATAGGGAGCTA+TGG | - | chr6_3:42659816-42659835 | Msa0951550:intron | 40.0% | |
| CCCCAGTAAACGTCATTTAT+AGG | - | chr6_3:42660206-42660225 | Msa0951550:intron | 40.0% | |
| AAAGATTGTGAGGTGGGATT+TGG | + | chr6_3:42660257-42660276 | None:intergenic | 40.0% | |
| GATGTGAAAGATTGTGAGGT+GGG | + | chr6_3:42660263-42660282 | None:intergenic | 40.0% | |
| AGATGTGAAAGATTGTGAGG+TGG | + | chr6_3:42660264-42660283 | None:intergenic | 40.0% | |
| AGATGAAGAGATTGCATGTG+AGG | + | chr6_3:42660365-42660384 | None:intergenic | 40.0% | |
| TTTGATGTGTCCTAGGCAAA+TGG | + | chr6_3:42660473-42660492 | None:intergenic | 40.0% | |
| TATGATCTCAGAAACTCGGT+GGG | + | chr6_3:42660534-42660553 | None:intergenic | 40.0% | |
| ATATGATCTCAGAAACTCGG+TGG | + | chr6_3:42660535-42660554 | None:intergenic | 40.0% | |
| TGACATAGTCACTGTGCATA+CGG | + | chr6_3:42660683-42660702 | None:intergenic | 40.0% | |
| GAGAGAATGATGGTAGAAGA+TGG | + | chr6_3:42662128-42662147 | None:intergenic | 40.0% | |
| GAGTTTGGACAGTAATAGGT+GGG | + | chr6_3:42662186-42662205 | None:intergenic | 40.0% | |
| AGAGTTTGGACAGTAATAGG+TGG | + | chr6_3:42662187-42662206 | None:intergenic | 40.0% | |
| GGAGGTTGAAGAAAATGGTA+TGG | + | chr6_3:42662262-42662281 | None:intergenic | 40.0% | |
| TAAAAGGCCAATATCCCAAC+AGG | + | chr6_3:42663007-42663026 | None:intergenic | 40.0% | |
| AGGTACATGTATTCCAAGAG+TGG | - | chr6_3:42663055-42663074 | Msa0951550:intron | 40.0% | |
| TTTCTACAACAGGACCCTTA+TGG | - | chr6_3:42663227-42663246 | Msa0951550:intron | 40.0% | |
| ! | TGTATGATAGGTTTGGAGCT+CGG | - | chr6_3:42663354-42663373 | Msa0951550:intron | 40.0% |
| TTCCCAAGAAGACGAGAAAA+GGG | + | chr6_3:42663471-42663490 | None:intergenic | 40.0% | |
| TTTCCCAAGAAGACGAGAAA+AGG | + | chr6_3:42663472-42663491 | None:intergenic | 40.0% | |
| ! | TCTGTTTGGGAGGGAGATTT+TGG | + | chr6_3:42654821-42654840 | None:intergenic | 45.0% |
| GTGGTGCAAAACATCTTTGC+TGG | - | chr6_3:42655439-42655458 | Msa0951550:intron | 45.0% | |
| TTCACCAAGTTTCGAGAGCT+TGG | - | chr6_3:42655596-42655615 | Msa0951550:intron | 45.0% | |
| AGAACCAAGCTCTCGAAACT+TGG | + | chr6_3:42655603-42655622 | None:intergenic | 45.0% | |
| AGGATTCATCCTAAGCGCAA+AGG | - | chr6_3:42655683-42655702 | Msa0951550:intron | 45.0% | |
| GAACAACTTCCTTTGCGCTT+AGG | + | chr6_3:42655695-42655714 | None:intergenic | 45.0% | |
| ! | CTCCTTAGAGTATCAGCATC+CGG | - | chr6_3:42655720-42655739 | Msa0951550:intron | 45.0% |
| ATCCGGATGCTGATACTCTA+AGG | + | chr6_3:42655725-42655744 | None:intergenic | 45.0% | |
| CTTCCTCAAGCTTCATCATC+CGG | + | chr6_3:42655742-42655761 | None:intergenic | 45.0% | |
| TTTGTTGCACCGTAATGCTG+AGG | + | chr6_3:42656219-42656238 | None:intergenic | 45.0% | |
| GATAGCTCACGTTCCTAAAC+TGG | + | chr6_3:42656590-42656609 | None:intergenic | 45.0% | |
| ! | TCAGTCGACTTTCGGATTGA+TGG | + | chr6_3:42656888-42656907 | None:intergenic | 45.0% |
| !! | ATGCTTCATTTTTGGGCCTC+GGG | - | chr6_3:42657008-42657027 | Msa0951550:intron | 45.0% |
| !! | GCCTTTCTGGAATATAAGGC+TGG | + | chr6_3:42657214-42657233 | None:intergenic | 45.0% |
| TTGGACAAGCAATGCCTTTC+TGG | + | chr6_3:42657227-42657246 | None:intergenic | 45.0% | |
| !! | CATTATGGCAGAGGGGTATT+GGG | + | chr6_3:42657382-42657401 | None:intergenic | 45.0% |
| CTATGTCCATTATGGCAGAG+GGG | + | chr6_3:42657389-42657408 | None:intergenic | 45.0% | |
| GCTATGTCCATTATGGCAGA+GGG | + | chr6_3:42657390-42657409 | None:intergenic | 45.0% | |
| TACCGGGAAAAAAATCTCGG+AGG | - | chr6_3:42657501-42657520 | Msa0951550:intron | 45.0% | |
| !!! | CTCCTCCGAGATTTTTTTCC+CGG | + | chr6_3:42657506-42657525 | None:intergenic | 45.0% |
| TCTCTTGTCATGACCCGTAA+AGG | - | chr6_3:42657528-42657547 | Msa0951550:intron | 45.0% | |
| TGTCATGACCCGTAAAGGAA+CGG | - | chr6_3:42657533-42657552 | Msa0951550:intron | 45.0% | |
| ACTAGACTCCGTTCCTTTAC+GGG | + | chr6_3:42657544-42657563 | None:intergenic | 45.0% | |
| CACTAGACTCCGTTCCTTTA+CGG | + | chr6_3:42657545-42657564 | None:intergenic | 45.0% | |
| ! | ACCCATATCCGAGATGGATT+CGG | - | chr6_3:42657565-42657584 | Msa0951550:intron | 45.0% |
| TCCGAATCCATCTCGGATAT+GGG | + | chr6_3:42657569-42657588 | None:intergenic | 45.0% | |
| !! | AGGCCATTACGCTTTTGACT+AGG | - | chr6_3:42657588-42657607 | Msa0951550:intron | 45.0% |
| ! | GGACCTAGTCAAAAGCGTAA+TGG | + | chr6_3:42657594-42657613 | None:intergenic | 45.0% |
| CTAAGTCTCAAGAGGGTAAG+CGG | - | chr6_3:42657639-42657658 | Msa0951550:intron | 45.0% | |
| TAAGTCTCAAGAGGGTAAGC+GGG | - | chr6_3:42657640-42657659 | Msa0951550:intron | 45.0% | |
| AAGGACGGAATCACGGATAA+AGG | - | chr6_3:42657664-42657683 | Msa0951550:intron | 45.0% | |
| TACATGCCACGATTCTTGGA+AGG | - | chr6_3:42657688-42657707 | Msa0951550:intron | 45.0% | |
| ACATGCCACGATTCTTGGAA+GGG | - | chr6_3:42657689-42657708 | Msa0951550:intron | 45.0% | |
| CTGATCAGGTACGATCAGAT+TGG | + | chr6_3:42658368-42658387 | None:intergenic | 45.0% | |
| TCTGATCGTACCTGATCAGA+AGG | - | chr6_3:42658369-42658388 | Msa0951550:intron | 45.0% | |
| TTTATAACTGGAACAGCGGG+GGG | - | chr6_3:42658444-42658463 | Msa0951550:intron | 45.0% | |
| !! | TCTCTTACTGACTTGAGCGT+CGG | + | chr6_3:42658487-42658506 | None:intergenic | 45.0% |
| CAGAATGAGGGTTTAGAGAG+AGG | - | chr6_3:42658508-42658527 | Msa0951550:intron | 45.0% | |
| ATGAGGGTTTAGAGAGAGGA+TGG | - | chr6_3:42658512-42658531 | Msa0951550:intron | 45.0% | |
| ! | AGAGAGGATGGATTCTACCT+TGG | - | chr6_3:42658524-42658543 | Msa0951550:intron | 45.0% |
| ! | GAGAGGATGGATTCTACCTT+GGG | - | chr6_3:42658525-42658544 | Msa0951550:intron | 45.0% |
| GAGTCCCCTTTATATAGAGG+TGG | - | chr6_3:42658556-42658575 | Msa0951550:intron | 45.0% | |
| GTGTTTGCAGAGTCGTTGTA+AGG | - | chr6_3:42658579-42658598 | Msa0951550:intron | 45.0% | |
| TTACCAAGAGCAACGACTCA+GGG | + | chr6_3:42658828-42658847 | None:intergenic | 45.0% | |
| TTTACCAAGAGCAACGACTC+AGG | + | chr6_3:42658829-42658848 | None:intergenic | 45.0% | |
| GTGATGACTTTGAATGAGCG+AGG | - | chr6_3:42658851-42658870 | Msa0951550:intron | 45.0% | |
| ATGCCTCACAAGTTCTACCA+CGG | - | chr6_3:42659007-42659026 | Msa0951550:intron | 45.0% | |
| AAACCGTGGTAGAACTTGTG+AGG | + | chr6_3:42659013-42659032 | None:intergenic | 45.0% | |
| ! | GGTTAACTGTGTCGTTCACA+AGG | - | chr6_3:42659100-42659119 | Msa0951550:intron | 45.0% |
| AGATTCCCTCGTTAGAGAGT+AGG | - | chr6_3:42659237-42659256 | Msa0951550:intron | 45.0% | |
| AACGACCTACTCTCTAACGA+GGG | + | chr6_3:42659245-42659264 | None:intergenic | 45.0% | |
| AAACGACCTACTCTCTAACG+AGG | + | chr6_3:42659246-42659265 | None:intergenic | 45.0% | |
| AGACTGAGAGGACATGACTT+TGG | - | chr6_3:42659301-42659320 | Msa0951550:intron | 45.0% | |
| !! | GAGGACATGACTTTGGTTCT+TGG | - | chr6_3:42659308-42659327 | Msa0951550:intron | 45.0% |
| GATGATCATACCTTGGGAAC+AGG | + | chr6_3:42659395-42659414 | None:intergenic | 45.0% | |
| CAACGGTGATGATCATACCT+TGG | + | chr6_3:42659402-42659421 | None:intergenic | 45.0% | |
| ! | AAGACTCTGAAGGACACGTT+AGG | + | chr6_3:42659432-42659451 | None:intergenic | 45.0% |
| ! | AGTCTATGGTTCTGCACACT+TGG | - | chr6_3:42659643-42659662 | Msa0951550:intron | 45.0% |
| ! | GTCTATGGTTCTGCACACTT+GGG | - | chr6_3:42659644-42659663 | Msa0951550:intron | 45.0% |
| ! | AATTCAAGCGGCAAAGGCAT+TGG | + | chr6_3:42659752-42659771 | None:intergenic | 45.0% |
| AAGCAGCATCCTAGAAGCAA+AGG | - | chr6_3:42659862-42659881 | Msa0951550:intron | 45.0% | |
| ! | CATCCTAGAAGCAAAGGTGT+CGG | - | chr6_3:42659868-42659887 | Msa0951550:intron | 45.0% |
| CCTTAGTTGCACACATGACA+GGG | + | chr6_3:42659894-42659913 | None:intergenic | 45.0% | |
| ACCTTAGTTGCACACATGAC+AGG | + | chr6_3:42659895-42659914 | None:intergenic | 45.0% | |
| !! | CAATTTGGTGCGATACAGAG+TGG | + | chr6_3:42660128-42660147 | None:intergenic | 45.0% |
| ! | GAGGTGGGATTTGGTTCAAA+TGG | + | chr6_3:42660248-42660267 | None:intergenic | 45.0% |
| TTGGCAACAACCATTTGCCT+AGG | - | chr6_3:42660460-42660479 | Msa0951550:intron | 45.0% | |
| TGTTATGGTGGCATTTAGGG+TGG | - | chr6_3:42662001-42662020 | Msa0951550:intron | 45.0% | |
| ! | GTAATAGGTGGGCTTGATGT+TGG | + | chr6_3:42662175-42662194 | None:intergenic | 45.0% |
| TGGGAGGAGGTTGAAGAAAA+TGG | + | chr6_3:42662267-42662286 | None:intergenic | 45.0% | |
| GAACAGAGACAAGTTAGGGT+GGG | + | chr6_3:42662286-42662305 | None:intergenic | 45.0% | |
| AGAACAGAGACAAGTTAGGG+TGG | + | chr6_3:42662287-42662306 | None:intergenic | 45.0% | |
| AATTAGGGATTGGAAGGGTG+AGG | + | chr6_3:42662315-42662334 | None:intergenic | 45.0% | |
| ! | GCTTCACTGCTTTGCTACTT+AGG | + | chr6_3:42662747-42662766 | None:intergenic | 45.0% |
| ! | AAAGCAGTGAAGCACCACTA+AGG | - | chr6_3:42662754-42662773 | Msa0951550:intron | 45.0% |
| !! | GTGAAGCACCACTAAGGTTT+TGG | - | chr6_3:42662760-42662779 | Msa0951550:intron | 45.0% |
| !! | CATGAGTATTGATGGTGAGG+AGG | - | chr6_3:42662841-42662860 | Msa0951550:intron | 45.0% |
| AGAGTTTCCCACAATGGGAA+AGG | + | chr6_3:42662960-42662979 | None:intergenic | 45.0% | |
| GGGAAAGAGTTTCCCACAAT+GGG | + | chr6_3:42662965-42662984 | None:intergenic | 45.0% | |
| AGGGAAAGAGTTTCCCACAA+TGG | + | chr6_3:42662966-42662985 | None:intergenic | 45.0% | |
| ATCCCAACAGGTGGCATTTA+GGG | + | chr6_3:42662995-42663014 | None:intergenic | 45.0% | |
| TATCCCAACAGGTGGCATTT+AGG | + | chr6_3:42662996-42663015 | None:intergenic | 45.0% | |
| AATGCCACCTGTTGGGATAT+TGG | - | chr6_3:42662997-42663016 | Msa0951550:intron | 45.0% | |
| TATTCCAAGAGTGGCACCAT+TGG | - | chr6_3:42663064-42663083 | Msa0951550:intron | 45.0% | |
| CCATGTCCATGATGTACCAA+TGG | + | chr6_3:42663083-42663102 | None:intergenic | 45.0% | |
| CCATTGGTACATCATGGACA+TGG | - | chr6_3:42663080-42663099 | Msa0951550:intron | 45.0% | |
| ! | GAAAAGGGCATGGCTCATAT+TGG | + | chr6_3:42663456-42663475 | None:intergenic | 45.0% |
| AAGAAGACGAGAAAAGGGCA+TGG | + | chr6_3:42663466-42663485 | None:intergenic | 45.0% | |
| ! | ATGCCCTTTTCTCGTCTTCT+TGG | - | chr6_3:42663465-42663484 | Msa0951550:intron | 45.0% |
| ! | TGCCCTTTTCTCGTCTTCTT+GGG | - | chr6_3:42663466-42663485 | Msa0951550:intron | 45.0% |
| !!! | TTTTATAAAAAAAAAATCTT+TGG | - | chr6_3:42661253-42661272 | Msa0951550:intron | 5.0% |
| CATTCAGCTTGTGGCAGCAA+TGG | + | chr6_3:42654516-42654535 | None:intergenic | 50.0% | |
| GACAGCAAGCATTCAGCTTG+TGG | + | chr6_3:42654525-42654544 | None:intergenic | 50.0% | |
| ! | CTTGCTGTCCGATCTGTACT+TGG | - | chr6_3:42654536-42654555 | Msa0951550:CDS | 50.0% |
| !! | GAGGGAGATTTTGGAGGACT+AGG | + | chr6_3:42654812-42654831 | None:intergenic | 50.0% |
| ! | GTTTGGGAGGGAGATTTTGG+AGG | + | chr6_3:42654818-42654837 | None:intergenic | 50.0% |
| CATCCGGATGATGAAGCTTG+AGG | - | chr6_3:42655736-42655755 | Msa0951550:intron | 50.0% | |
| AGTTGCAGCTGCTTCCTCAA+TGG | - | chr6_3:42656854-42656873 | Msa0951550:intron | 50.0% | |
| CACGAAAAGTTCAAGACCCG+AGG | + | chr6_3:42657027-42657046 | None:intergenic | 50.0% | |
| ! | CCATTATGGCAGAGGGGTAT+TGG | + | chr6_3:42657383-42657402 | None:intergenic | 50.0% |
| CCAATACCCCTCTGCCATAA+TGG | - | chr6_3:42657380-42657399 | Msa0951550:intron | 50.0% | |
| GGCTATGTCCATTATGGCAG+AGG | + | chr6_3:42657391-42657410 | None:intergenic | 50.0% | |
| CGGGAAAAAAATCTCGGAGG+AGG | - | chr6_3:42657504-42657523 | Msa0951550:intron | 50.0% | |
| CTAGTGACCCATATCCGAGA+TGG | - | chr6_3:42657559-42657578 | Msa0951550:intron | 50.0% | |
| CTCCGAATCCATCTCGGATA+TGG | + | chr6_3:42657570-42657589 | None:intergenic | 50.0% | |
| ! | CATATCCGAGATGGATTCGG+AGG | - | chr6_3:42657568-42657587 | Msa0951550:intron | 50.0% |
| AATGGCCTCCGAATCCATCT+CGG | + | chr6_3:42657576-42657595 | None:intergenic | 50.0% | |
| AGGCTACATGCCACGATTCT+TGG | - | chr6_3:42657684-42657703 | Msa0951550:intron | 50.0% | |
| CTGACAGTCACCTTCTGATC+AGG | + | chr6_3:42658382-42658401 | None:intergenic | 50.0% | |
| ATGCGATGATTGTACGGTGG+TGG | - | chr6_3:42658411-42658430 | Msa0951550:intron | 50.0% | |
| TTATAACTGGAACAGCGGGG+GGG | - | chr6_3:42658445-42658464 | Msa0951550:intron | 50.0% | |
| GCCCAATAGTTACACTTCCG+AGG | + | chr6_3:42658632-42658651 | None:intergenic | 50.0% | |
| TACCAAGAGCAACGACTCAG+GGG | + | chr6_3:42658827-42658846 | None:intergenic | 50.0% | |
| GGAGCAGTATAACTCGCAAG+AGG | - | chr6_3:42658984-42659003 | Msa0951550:intron | 50.0% | |
| AGCATATTCGGGATCCTAGC+GGG | + | chr6_3:42659131-42659150 | None:intergenic | 50.0% | |
| GAGCATATTCGGGATCCTAG+CGG | + | chr6_3:42659132-42659151 | None:intergenic | 50.0% | |
| TCAGTCTTACCCACGAGACA+CGG | + | chr6_3:42659288-42659307 | None:intergenic | 50.0% | |
| TTCTTGGCTGCCACGTGTAA+AGG | - | chr6_3:42659324-42659343 | Msa0951550:intron | 50.0% | |
| ! | CAAGACACACTCAAGGCACT+AGG | + | chr6_3:42659369-42659388 | None:intergenic | 50.0% |
| CAGGCATCAAGACACACTCA+AGG | + | chr6_3:42659376-42659395 | None:intergenic | 50.0% | |
| TGTCTTGATGCCTGTTCCCA+AGG | - | chr6_3:42659382-42659401 | Msa0951550:intron | 50.0% | |
| CAGAGTCTGATGACCTTCAG+AGG | - | chr6_3:42659481-42659500 | Msa0951550:intron | 50.0% | |
| AGGGAGCTATGGTGCTTGTA+TGG | - | chr6_3:42659827-42659846 | Msa0951550:intron | 50.0% | |
| CCCTGTCATGTGTGCAACTA+AGG | - | chr6_3:42659891-42659910 | Msa0951550:intron | 50.0% | |
| AGGTGTCCAAGTACTTCCTC+CGG | - | chr6_3:42659911-42659930 | Msa0951550:intron | 50.0% | |
| !! | TTGTGACCGGAGGAAGTACT+TGG | + | chr6_3:42659920-42659939 | None:intergenic | 50.0% |
| CTTTCTGATTGAGGGCCCAA+TGG | - | chr6_3:42660045-42660064 | Msa0951550:intron | 50.0% | |
| !! | GTGCGATACAGAGTGGATTG+GGG | + | chr6_3:42660121-42660140 | None:intergenic | 50.0% |
| ! | GGTGCGATACAGAGTGGATT+GGG | + | chr6_3:42660122-42660141 | None:intergenic | 50.0% |
| TGGTGCGATACAGAGTGGAT+TGG | + | chr6_3:42660123-42660142 | None:intergenic | 50.0% | |
| ! | TCTCAGAAACTCGGTGGGTT+GGG | + | chr6_3:42660529-42660548 | None:intergenic | 50.0% |
| ! | ATCTCAGAAACTCGGTGGGT+TGG | + | chr6_3:42660530-42660549 | None:intergenic | 50.0% |
| CAGTGACTATGTCACACCTC+AGG | - | chr6_3:42660689-42660708 | Msa0951550:intron | 50.0% | |
| ! | TGGTGGCATTTAGGGTGGAA+AGG | - | chr6_3:42662006-42662025 | Msa0951550:intron | 50.0% |
| ! | GGTGGCATTTAGGGTGGAAA+GGG | - | chr6_3:42662007-42662026 | Msa0951550:intron | 50.0% |
| ! | GTGGCATTTAGGGTGGAAAG+GGG | - | chr6_3:42662008-42662027 | Msa0951550:intron | 50.0% |
| GCATGGAGGAGAGAGAATGA+TGG | + | chr6_3:42662138-42662157 | None:intergenic | 50.0% | |
| ! | ATAGGTGGGCTTGATGTTGG+TGG | + | chr6_3:42662172-42662191 | None:intergenic | 50.0% |
| ! | CAACAGGTGGCATTTAGGGT+GGG | + | chr6_3:42662991-42663010 | None:intergenic | 50.0% |
| CACCCTAAATGCCACCTGTT+GGG | - | chr6_3:42662990-42663009 | Msa0951550:intron | 50.0% | |
| AAGGCCAATATCCCAACAGG+TGG | + | chr6_3:42663004-42663023 | None:intergenic | 50.0% | |
| !! | TGTACCAATGGTGCCACTCT+TGG | + | chr6_3:42663071-42663090 | None:intergenic | 50.0% |
| GTGGCACCATTGGTACATCA+TGG | - | chr6_3:42663074-42663093 | Msa0951550:intron | 50.0% | |
| CTTGGGTCAGCACTATAGCA+GGG | + | chr6_3:42663433-42663452 | None:intergenic | 50.0% | |
| !! | GGCATGGCTCATATTGGCTT+GGG | + | chr6_3:42663450-42663469 | None:intergenic | 50.0% |
| CAAACCTGCTCGCTTACGAG+TGG | - | chr6_3:42655420-42655439 | Msa0951550:intron | 55.0% | |
| ! | CAACAGGCTTTGTCGTCTGC+AGG | + | chr6_3:42656034-42656053 | None:intergenic | 55.0% |
| CTGCAGACGACAAAGCCTGT+TGG | - | chr6_3:42656032-42656051 | Msa0951550:intron | 55.0% | |
| CAGGTGTCAGTGTCAGACAC+AGG | - | chr6_3:42656446-42656465 | Msa0951550:intron | 55.0% | |
| ! | TGATGGAGCTCGTGCCATTG+AGG | + | chr6_3:42656871-42656890 | None:intergenic | 55.0% |
| !! | GGTGACAGCTTAAGTTGGGG+CGG | - | chr6_3:42657438-42657457 | Msa0951550:intron | 55.0% |
| GGTCGAATTGACCACGTGCT+CGG | - | chr6_3:42657459-42657478 | Msa0951550:intron | 55.0% | |
| !! | GCTTTTGACTAGGTCCCCAC+AGG | - | chr6_3:42657598-42657617 | Msa0951550:intron | 55.0% |
| CTCAAGAGGGTAAGCGGGAA+AGG | - | chr6_3:42657645-42657664 | Msa0951550:intron | 55.0% | |
| AGAGGGTAAGCGGGAAAGGA+CGG | - | chr6_3:42657649-42657668 | Msa0951550:intron | 55.0% | |
| AGCGGGAAAGGACGGAATCA+CGG | - | chr6_3:42657657-42657676 | Msa0951550:intron | 55.0% | |
| TGCCACGATTCTTGGAAGGG+CGG | - | chr6_3:42657692-42657711 | Msa0951550:intron | 55.0% | |
| TTCCGCCCTTCCAAGAATCG+TGG | + | chr6_3:42657697-42657716 | None:intergenic | 55.0% | |
| CTTACTATGGCCTCCCTGGA+TGG | + | chr6_3:42657913-42657932 | None:intergenic | 55.0% | |
| CATCCAGGGAGGCCATAGTA+AGG | - | chr6_3:42657911-42657930 | Msa0951550:intron | 55.0% | |
| CCGAGGAATTCGTAACCGCT+GGG | + | chr6_3:42658615-42658634 | None:intergenic | 55.0% | |
| CCCAGCGGTTACGAATTCCT+CGG | - | chr6_3:42658612-42658631 | Msa0951550:intron | 55.0% | |
| TCCGAGGAATTCGTAACCGC+TGG | + | chr6_3:42658616-42658635 | None:intergenic | 55.0% | |
| GAGATTCGCGTGAACGTGGA+AGG | - | chr6_3:42658653-42658672 | Msa0951550:intron | 55.0% | |
| ACCAAGAGCAACGACTCAGG+GGG | + | chr6_3:42658826-42658845 | None:intergenic | 55.0% | |
| ATGAGCGAGGGAACTGCTTG+TGG | - | chr6_3:42658864-42658883 | Msa0951550:intron | 55.0% | |
| TCCATCGCAGTCATGTCCGA+AGG | + | chr6_3:42658967-42658986 | None:intergenic | 55.0% | |
| TTCACAAGGATGTGCCCGCT+AGG | - | chr6_3:42659114-42659133 | Msa0951550:intron | 55.0% | |
| TCGTTAATGCCCGTGTCTCG+TGG | - | chr6_3:42659275-42659294 | Msa0951550:intron | 55.0% | |
| CGTTAATGCCCGTGTCTCGT+GGG | - | chr6_3:42659276-42659295 | Msa0951550:intron | 55.0% | |
| CAGTCTTACCCACGAGACAC+GGG | + | chr6_3:42659287-42659306 | None:intergenic | 55.0% | |
| GTCTCGTGGGTAAGACTGAG+AGG | - | chr6_3:42659289-42659308 | Msa0951550:intron | 55.0% | |
| !! | TCAGAAACTCGGTGGGTTGG+GGG | + | chr6_3:42660527-42660546 | None:intergenic | 55.0% |
| !! | CTCAGAAACTCGGTGGGTTG+GGG | + | chr6_3:42660528-42660547 | None:intergenic | 55.0% |
| ! | TGGTGGGTGATGAAGCATGG+AGG | + | chr6_3:42662152-42662171 | None:intergenic | 55.0% |
| !! | TGGTGGTGGGTGATGAAGCA+TGG | + | chr6_3:42662155-42662174 | None:intergenic | 55.0% |
| !! | GTGGGCTTGATGTTGGTGGT+GGG | + | chr6_3:42662168-42662187 | None:intergenic | 55.0% |
| AGACAAGTTAGGGTGGGAGG+AGG | + | chr6_3:42662280-42662299 | None:intergenic | 55.0% | |
| CAGAGACAAGTTAGGGTGGG+AGG | + | chr6_3:42662283-42662302 | None:intergenic | 55.0% | |
| ! | GTGGCATTTAGGGTGGGTGA+GGG | + | chr6_3:42662985-42663004 | None:intergenic | 55.0% |
| CCAACAGGTGGCATTTAGGG+TGG | + | chr6_3:42662992-42663011 | None:intergenic | 55.0% | |
| CCACCCTAAATGCCACCTGT+TGG | - | chr6_3:42662989-42663008 | Msa0951550:intron | 55.0% | |
| CAGCTGATCCCAACAGTGAC+AGG | - | chr6_3:42663405-42663424 | Msa0951550:intron | 55.0% | |
| GCAGGGAACCTGTCACTGTT+GGG | + | chr6_3:42663416-42663435 | None:intergenic | 55.0% | |
| AGCAGGGAACCTGTCACTGT+TGG | + | chr6_3:42663417-42663436 | None:intergenic | 55.0% | |
| GCTTGGGTCAGCACTATAGC+AGG | + | chr6_3:42663434-42663453 | None:intergenic | 55.0% | |
| ! | GGGCATGGCTCATATTGGCT+TGG | + | chr6_3:42663451-42663470 | None:intergenic | 55.0% |
| TTGGGAAATCGCAGCTGCTG+AGG | - | chr6_3:42663484-42663503 | Msa0951550:CDS | 55.0% | |
| TGCACCACTCGTAAGCGAGC+AGG | + | chr6_3:42655427-42655446 | None:intergenic | 60.0% | |
| CGTGGGCGAGATAGGCATAC+CGG | - | chr6_3:42657484-42657503 | Msa0951550:intron | 60.0% | |
| GTGGGCGAGATAGGCATACC+GGG | - | chr6_3:42657485-42657504 | Msa0951550:intron | 60.0% | |
| CTGCCTTACTATGGCCTCCC+TGG | + | chr6_3:42657917-42657936 | None:intergenic | 60.0% | |
| !! | TTGAGCGTCGGAGTGTCTGC+AGG | + | chr6_3:42658475-42658494 | None:intergenic | 60.0% |
| TAAGGCACACGTGTGCCCAG+CGG | - | chr6_3:42658597-42658616 | Msa0951550:intron | 60.0% | |
| GGCAGAGATTCGCGTGAACG+TGG | - | chr6_3:42658649-42658668 | Msa0951550:intron | 60.0% | |
| GCCTTCGGACATGACTGCGA+TGG | - | chr6_3:42658963-42658982 | Msa0951550:intron | 60.0% | |
| GGGCCGACACCTTTGCTTCT+AGG | + | chr6_3:42659874-42659893 | None:intergenic | 60.0% | |
| !! | AGAAACTCGGTGGGTTGGGG+GGG | + | chr6_3:42660525-42660544 | None:intergenic | 60.0% |
| !! | CAGAAACTCGGTGGGTTGGG+GGG | + | chr6_3:42660526-42660545 | None:intergenic | 60.0% |
| ! | GGTGGGCTTGATGTTGGTGG+TGG | + | chr6_3:42662169-42662188 | None:intergenic | 60.0% |
| ! | GGTGGCATTTAGGGTGGGTG+AGG | + | chr6_3:42662986-42663005 | None:intergenic | 60.0% |
| GGGGACTCTTCGCAGTCCCA+AGG | + | chr6_3:42658544-42658563 | None:intergenic | 65.0% | |
| TGCTACGAACACCCCGCTCG+CGG | - | chr6_3:42658708-42658727 | Msa0951550:intron | 65.0% | |
| GCCCCCTGAGTCGTTGCTCT+TGG | - | chr6_3:42658822-42658841 | Msa0951550:intron | 65.0% | |
| !! | AAACTCGGTGGGTTGGGGGG+GGG | + | chr6_3:42660523-42660542 | None:intergenic | 65.0% |
| !! | GAAACTCGGTGGGTTGGGGG+GGG | + | chr6_3:42660524-42660543 | None:intergenic | 65.0% |
| TTGACCACGTGCTCGGCGCG+TGG | - | chr6_3:42657466-42657485 | Msa0951550:intron | 70.0% | |
| TGACCACGTGCTCGGCGCGT+GGG | - | chr6_3:42657467-42657486 | Msa0951550:intron | 70.0% | |
| GCTACGAACACCCCGCTCGC+GGG | - | chr6_3:42658709-42658728 | Msa0951550:intron | 70.0% | |
| CTACGAACACCCCGCTCGCG+GGG | - | chr6_3:42658710-42658729 | Msa0951550:intron | 70.0% | |
| AACACCCCGCTCGCGGGGAA+GGG | - | chr6_3:42658715-42658734 | Msa0951550:intron | 70.0% | |
| ACACACCCCTTCCCCGCGAG+CGG | + | chr6_3:42658724-42658743 | None:intergenic | 70.0% | |
| !! | AACTCGGTGGGTTGGGGGGG+GGG | + | chr6_3:42660522-42660541 | None:intergenic | 70.0% |
| GCTCGGCGCGTGGGCGAGAT+AGG | - | chr6_3:42657476-42657495 | Msa0951550:intron | 75.0% | |
| GAACACCCCGCTCGCGGGGA+AGG | - | chr6_3:42658714-42658733 | Msa0951550:intron | 75.0% | |
| ACACCCCGCTCGCGGGGAAG+GGG | - | chr6_3:42658716-42658735 | Msa0951550:intron | 75.0% | |
| ACACCCCTTCCCCGCGAGCG+GGG | + | chr6_3:42658722-42658741 | None:intergenic | 75.0% | |
| CACACCCCTTCCCCGCGAGC+GGG | + | chr6_3:42658723-42658742 | None:intergenic | 75.0% | |
| !! | ACTCGGTGGGTTGGGGGGGG+GGG | + | chr6_3:42660521-42660540 | None:intergenic | 75.0% |
| ! | TCGCCCACGCGCCGAGCACG+TGG | + | chr6_3:42657473-42657492 | None:intergenic | 80.0% |
| !!! | TCGGTGGGTTGGGGGGGGGG+GGG | + | chr6_3:42660519-42660538 | None:intergenic | 80.0% |
| !!! | CTCGGTGGGTTGGGGGGGGG+GGG | + | chr6_3:42660520-42660539 | None:intergenic | 80.0% |
| !! | TGGGTTGGGGGGGGGGGGGG+GGG | + | chr6_3:42660515-42660534 | None:intergenic | 85.0% |
| !!! | GTGGGTTGGGGGGGGGGGGG+GGG | + | chr6_3:42660516-42660535 | None:intergenic | 85.0% |
| !!! | GGTGGGTTGGGGGGGGGGGG+GGG | + | chr6_3:42660517-42660536 | None:intergenic | 85.0% |
| !!! | CGGTGGGTTGGGGGGGGGGG+GGG | + | chr6_3:42660518-42660537 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660511-42660530 | None:intergenic | 90.0% |
| ! | GTTGGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660512-42660531 | None:intergenic | 90.0% |
| ! | GGTTGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660513-42660532 | None:intergenic | 90.0% |
| ! | GGGTTGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660514-42660533 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr6_3:42660510-42660529 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 42654492 | 42663547 | 42654492 | ID=Msa0951550;Name=Msa0951550 |
| chr6_3 | mRNA | 42654492 | 42663547 | 42654492 | ID=Msa0951550-mRNA-1;Parent=Msa0951550;Name=Msa0951550-mRNA-1;_AED=0.55;_eAED=0.61;_QI=0|0|0|0.4|1|1|5|0|149 |
| chr6_3 | exon | 42663482 | 42663547 | 42663482 | ID=Msa0951550-mRNA-1:exon:9946;Parent=Msa0951550-mRNA-1 |
| chr6_3 | exon | 42661929 | 42662001 | 42661929 | ID=Msa0951550-mRNA-1:exon:9945;Parent=Msa0951550-mRNA-1 |
| chr6_3 | exon | 42661288 | 42661312 | 42661288 | ID=Msa0951550-mRNA-1:exon:9944;Parent=Msa0951550-mRNA-1 |
| chr6_3 | exon | 42661119 | 42661200 | 42661119 | ID=Msa0951550-mRNA-1:exon:9943;Parent=Msa0951550-mRNA-1 |
| chr6_3 | exon | 42654492 | 42654695 | 42654492 | ID=Msa0951550-mRNA-1:exon:9942;Parent=Msa0951550-mRNA-1 |
| chr6_3 | CDS | 42663482 | 42663547 | 42663482 | ID=Msa0951550-mRNA-1:cds;Parent=Msa0951550-mRNA-1 |
| chr6_3 | CDS | 42661929 | 42662001 | 42661929 | ID=Msa0951550-mRNA-1:cds;Parent=Msa0951550-mRNA-1 |
| chr6_3 | CDS | 42661288 | 42661312 | 42661288 | ID=Msa0951550-mRNA-1:cds;Parent=Msa0951550-mRNA-1 |
| chr6_3 | CDS | 42661119 | 42661200 | 42661119 | ID=Msa0951550-mRNA-1:cds;Parent=Msa0951550-mRNA-1 |
| chr6_3 | CDS | 42654492 | 42654695 | 42654492 | ID=Msa0951550-mRNA-1:cds;Parent=Msa0951550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
