AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1223330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223330 MtrunA17_Chr4g0074811 97.030 303 9 0 52 354 237 539 0.0 608
Msa1223330 MtrunA17_Chr4g0074811 85.455 55 6 2 1 55 1 53 7.21e-23 99.8
Msa1223330 MtrunA17_Chr5g0444171 80.528 303 59 0 52 354 238 540 0.0 523
Msa1223330 MtrunA17_Chr3g0098951 79.032 310 57 2 52 354 230 538 1.71e-178 506
Msa1223330 MtrunA17_Chr4g0074791 77.228 303 58 2 52 354 242 533 4.50e-170 484
Msa1223330 MtrunA17_Chr1g0157131 75.593 295 72 0 52 346 220 514 6.20e-168 478
Msa1223330 MtrunA17_Chr8g0387671 73.064 297 80 0 52 348 212 508 4.57e-163 466
Msa1223330 MtrunA17_Chr5g0397101 72.391 297 81 1 52 348 213 508 3.99e-160 458
Msa1223330 MtrunA17_Chr0c02g0489761 70.486 288 85 0 61 348 233 520 4.54e-151 436
Msa1223330 MtrunA17_Chr5g0441691 71.181 288 83 0 61 348 223 510 2.07e-150 434
Msa1223330 MtrunA17_Chr1g0170281 61.794 301 113 2 52 351 264 563 1.81e-135 398
Msa1223330 MtrunA17_Chr5g0448721 62.373 295 110 1 52 346 242 535 6.03e-133 390
Msa1223330 MtrunA17_Chr1g0176751 61.333 300 115 1 52 351 270 568 8.10e-132 389
Msa1223330 MtrunA17_Chr8g0385341 64.808 287 100 1 60 346 184 469 1.46e-131 385
Msa1223330 MtrunA17_Chr1g0200601 62.369 287 107 1 60 346 184 469 1.63e-131 385
Msa1223330 MtrunA17_Chr3g0131181 62.369 287 107 1 60 346 183 468 4.81e-130 382
Msa1223330 MtrunA17_Chr1g0176421 56.308 325 109 2 52 344 307 630 3.84e-128 381
Msa1223330 MtrunA17_Chr4g0059951 58.784 296 121 1 52 346 219 514 3.34e-125 370
Msa1223330 MtrunA17_Chr7g0267751 56.610 295 127 1 52 346 281 574 4.58e-121 362
Msa1223330 MtrunA17_Chr7g0242561 53.716 296 136 1 52 346 202 497 7.21e-115 343
Msa1223330 MtrunA17_Chr1g0173541 51.389 288 139 1 60 346 206 493 5.08e-108 326
Msa1223330 MtrunA17_Chr4g0033371 49.831 295 148 0 52 346 218 512 1.56e-106 322
Msa1223330 MtrunA17_Chr7g0257751 49.662 296 148 1 52 346 204 499 2.35e-105 319
Msa1223330 MtrunA17_Chr5g0405421 43.878 294 153 3 60 346 255 543 4.40e-84 265
Msa1223330 MtrunA17_Chr5g0444191 75.200 125 28 1 58 182 60 181 2.57e-64 203
Msa1223330 MtrunA17_Chr8g0374701 33.910 289 182 4 60 343 286 570 2.61e-56 192
Msa1223330 MtrunA17_Chr4g0045261 33.564 289 183 4 60 343 295 579 6.36e-56 192
Msa1223330 MtrunA17_Chr5g0402551 33.216 283 180 4 66 343 298 576 1.83e-53 185
Msa1223330 MtrunA17_Chr7g0256001 33.910 289 183 3 60 343 299 584 1.58e-52 183
Msa1223330 MtrunA17_Chr7g0267771 47.475 198 95 2 52 249 234 422 2.12e-52 180
Msa1223330 MtrunA17_Chr7g0276111 32.248 307 191 7 52 348 294 593 4.91e-49 173
Msa1223330 MtrunA17_Chr3g0127571 36.863 255 153 4 60 309 296 547 1.17e-48 172
Msa1223330 MtrunA17_Chr8g0355131 30.164 305 182 7 67 344 208 508 3.89e-37 140
Msa1223330 MtrunA17_Chr1g0203881 55.238 105 47 0 60 164 195 299 3.85e-34 131
Msa1223330 MtrunA17_Chr5g0441771 57.692 104 24 1 130 233 18 101 6.93e-31 113
Msa1223330 MtrunA17_Chr1g0190131 45.946 111 59 1 61 170 160 270 4.89e-30 115
Msa1223330 MtrunA17_Chr5g0441781 68.421 76 24 0 273 348 1 76 5.71e-30 110
Msa1223330 MtrunA17_Chr5g0440931 40.136 147 84 3 200 343 1 146 3.53e-27 104
Msa1223330 MtrunA17_Chr3g0093271 39.456 147 85 3 200 343 52 197 8.72e-27 105
Msa1223330 MtrunA17_Chr6g0460211 39.456 147 85 3 200 343 1 146 1.01e-26 103
Msa1223330 MtrunA17_Chr7g0254731 38.776 147 86 3 200 343 1 146 1.80e-26 102
Msa1223330 MtrunA17_Chr1g0166281 37.584 149 89 3 200 345 1 148 5.12e-26 101
Msa1223330 MtrunA17_Chr3g0132591 45.192 104 57 0 61 164 257 360 3.09e-24 103
Msa1223330 MtrunA17_Chr1g0188171 36.242 149 91 3 200 345 1 148 1.33e-23 95.1
Msa1223330 MtrunA17_Chr7g0274941 40.351 114 66 1 61 172 169 282 1.51e-23 99.0
Msa1223330 MtrunA17_Chr1g0185001 33.562 146 94 2 200 343 1 145 6.09e-21 87.8
Msa1223330 MtrunA17_Chr4g0062221 36.364 143 83 3 207 343 7 147 2.09e-19 84.3
Msa1223330 MtrunA17_Chr4g0033601 35.461 141 83 4 212 346 6 144 2.75e-19 83.6
Msa1223330 MtrunA17_Chr4g0001331 38.760 129 67 4 41 167 159 277 2.31e-18 85.9
Msa1223330 MtrunA17_Chr4g0069301 37.705 122 64 5 48 167 173 284 2.36e-18 85.9
Msa1223330 MtrunA17_Chr5g0434951 37.226 137 77 4 212 343 5 137 5.88e-18 79.7
Msa1223330 MtrunA17_Chr8g0351491 36.190 105 64 2 65 168 169 271 6.13e-18 82.8
Msa1223330 MtrunA17_Chr8g0391691 36.111 144 82 4 212 349 37 176 1.05e-17 80.1
Msa1223330 MtrunA17_Chr7g0245231 34.483 145 91 3 204 345 23 166 1.98e-17 79.0
Msa1223330 MtrunA17_Chr3g0125381 36.190 105 64 2 65 168 108 210 2.41e-17 79.7
Msa1223330 MtrunA17_Chr3g0140631 37.037 108 65 2 65 171 190 295 2.73e-17 81.3
Msa1223330 MtrunA17_Chr1g0205421 37.607 117 61 4 53 167 163 269 2.03e-16 80.1
Msa1223330 MtrunA17_Chr1g0169581 34.752 141 78 4 212 343 5 140 2.24e-16 75.1
Msa1223330 MtrunA17_Chr1g0150321 41.176 102 54 4 68 167 173 270 4.14e-16 79.0
Msa1223330 MtrunA17_Chr8g0368681 32.414 145 90 3 205 343 6 148 4.57e-16 75.1
Msa1223330 MtrunA17_Chr2g0304111 37.069 116 62 5 59 167 170 281 5.16e-16 79.0
Msa1223330 MtrunA17_Chr4g0064231 34.194 155 82 3 212 346 65 219 5.29e-16 76.3
Msa1223330 MtrunA17_Chr8g0353621 35.644 101 62 2 65 164 163 261 6.26e-16 77.0
Msa1223330 MtrunA17_Chr8g0366401 31.333 150 94 3 204 346 10 157 6.52e-16 74.7
Msa1223330 MtrunA17_Chr7g0256171 34.286 140 86 3 212 346 6 144 9.00e-16 73.9
Msa1223330 MtrunA17_Chr8g0346071 41.121 107 57 4 63 167 171 273 1.20e-15 77.8
Msa1223330 MtrunA17_Chr6g0450921 35.417 144 84 5 212 349 30 170 1.29e-15 73.9
Msa1223330 MtrunA17_Chr8g0392951 33.803 142 87 4 212 349 25 163 1.61e-15 73.6
Msa1223330 MtrunA17_Chr6g0482731 34.559 136 83 3 212 343 27 160 1.63e-15 73.6
Msa1223330 MtrunA17_Chr3g0111371 34.028 144 82 5 204 343 1 135 1.99e-15 72.4
Msa1223330 MtrunA17_Chr4g0063881 42.157 102 53 4 68 167 170 267 3.16e-15 76.6
Msa1223330 MtrunA17_Chr2g0329371 31.915 141 90 2 212 346 65 205 4.21e-15 73.6
Msa1223330 MtrunA17_Chr4g0044961 28.409 176 120 3 177 349 23 195 5.01e-15 72.8
Msa1223330 MtrunA17_Chr7g0244561 32.374 139 81 6 60 192 170 301 5.87e-15 75.5
Msa1223330 MtrunA17_Chr1g0161211 35.294 136 82 3 212 343 47 180 7.19e-15 72.4
Msa1223330 MtrunA17_Chr6g0453681 38.318 107 60 2 61 165 170 272 1.02e-14 75.1
Msa1223330 MtrunA17_Chr6g0468751 28.365 208 112 6 61 255 170 353 1.02e-14 75.1
Msa1223330 MtrunA17_Chr7g0245911 33.333 147 85 4 212 346 48 193 1.15e-14 72.0
Msa1223330 MtrunA17_Chr8g0346081 39.815 108 59 4 62 167 170 273 1.87e-14 74.3
Msa1223330 MtrunA17_Chr4g0008561 32.500 120 78 3 58 175 169 287 2.32e-14 74.3
Msa1223330 MtrunA17_Chr5g0398751 32.653 147 93 4 200 343 1 144 2.49e-14 69.7
Msa1223330 MtrunA17_Chr2g0333821 35.659 129 71 5 41 167 153 271 2.54e-14 73.9
Msa1223330 MtrunA17_Chr4g0013131 39.091 110 58 5 68 175 172 274 2.83e-14 73.6
Msa1223330 MtrunA17_Chr3g0100541 30.464 151 90 2 197 346 38 174 3.14e-14 70.1
Msa1223330 MtrunA17_Chr3g0132671 36.697 109 63 2 61 167 200 304 3.33e-14 73.6
Msa1223330 MtrunA17_Chr3g0125311 33.784 148 80 4 212 343 14 159 4.45e-14 69.3
Msa1223330 MtrunA17_Chr2g0284011 33.945 109 66 3 68 174 172 276 5.19e-14 72.8
Msa1223330 MtrunA17_Chr2g0302431 37.255 102 58 4 68 167 181 278 5.45e-14 72.8
Msa1223330 MtrunA17_Chr6g0453671 38.318 107 60 2 61 165 170 272 5.52e-14 72.4
Msa1223330 MtrunA17_Chr5g0441011 38.614 101 56 4 68 166 174 270 6.05e-14 72.8
Msa1223330 MtrunA17_Chr5g0432491 37.864 103 58 4 67 167 183 281 6.85e-14 72.4
Msa1223330 MtrunA17_Chr6g0478601 37.273 110 56 4 65 166 298 402 1.24e-13 72.0
Msa1223330 MtrunA17_Chr5g0399911 35.577 104 63 3 65 164 172 275 1.42e-13 70.9
Msa1223330 MtrunA17_Chr7g0274101 32.653 147 95 3 200 343 1 146 1.90e-13 67.4
Msa1223330 MtrunA17_Chr7g0244521 37.273 110 60 4 68 175 172 274 2.28e-13 70.9
Msa1223330 MtrunA17_Chr3g0131061 33.654 104 65 3 65 164 157 260 4.63e-13 69.3
Msa1223330 MtrunA17_Chr8g0380661 35.185 108 56 5 65 163 154 256 5.91e-13 68.9
Msa1223330 MtrunA17_Chr4g0057651 33.071 127 80 2 220 343 15 139 6.33e-13 65.5
Msa1223330 MtrunA17_Chr8g0338741 29.814 161 95 5 6 165 201 344 8.99e-13 68.9
Msa1223330 MtrunA17_Chr3g0131501 29.655 145 95 3 196 339 19 157 1.13e-12 68.9
Msa1223330 MtrunA17_Chr8g0369111 26.087 184 111 3 178 339 28 208 1.41e-12 66.6
Msa1223330 MtrunA17_Chr1g0160151 32.877 146 76 5 212 343 23 160 1.42e-12 65.1
Msa1223330 MtrunA17_Chr8g0381821 35.577 104 63 3 65 164 157 260 1.54e-12 67.8
Msa1223330 MtrunA17_Chr8g0385571 28.302 159 106 4 196 353 41 192 1.55e-12 68.6
Msa1223330 MtrunA17_Chr4g0057661 33.071 127 80 2 220 343 15 139 1.61e-12 64.3
Msa1223330 MtrunA17_Chr5g0428981 36.792 106 62 3 65 166 949 1053 1.65e-12 68.9
Msa1223330 MtrunA17_Chr1g0170551 34.286 105 64 3 63 166 159 259 1.65e-12 68.9
Msa1223330 MtrunA17_Chr8g0385281 33.654 104 65 3 65 164 158 261 2.47e-12 67.4
Msa1223330 MtrunA17_Chr8g0373691 28.105 153 104 3 195 343 37 187 2.49e-12 65.1
Msa1223330 MtrunA17_Chr2g0277501 33.654 104 65 3 65 164 157 260 2.63e-12 67.0
Msa1223330 MtrunA17_Chr7g0256701 31.206 141 86 4 212 343 74 212 2.65e-12 65.5
Msa1223330 MtrunA17_Chr7g0245371 28.378 148 92 2 212 345 25 172 2.67e-12 64.7
Msa1223330 MtrunA17_Chr4g0018201 36.792 106 62 3 65 166 945 1049 2.85e-12 68.2
Msa1223330 MtrunA17_Chr2g0284031 31.776 107 67 4 63 167 186 288 3.17e-12 67.4
Msa1223330 MtrunA17_Chr4g0057641 31.061 132 86 2 215 343 10 139 3.99e-12 63.2
Msa1223330 MtrunA17_Chr4g0055451 35.238 105 62 4 65 164 158 261 5.89e-12 65.9
Msa1223330 MtrunA17_Chr5g0402361 29.412 136 95 1 212 346 49 184 6.18e-12 66.2
Msa1223330 MtrunA17_Chr8g0351681 29.139 151 97 3 207 347 45 195 7.59e-12 63.9
Msa1223330 MtrunA17_Chr7g0225921 30.827 133 86 3 215 343 10 140 8.17e-12 62.4
Msa1223330 MtrunA17_Chr2g0299781 32.374 139 81 5 39 166 286 422 1.03e-11 65.9
Msa1223330 MtrunA17_Chr3g0100511 27.517 149 93 2 197 344 38 172 1.37e-11 62.8
Msa1223330 MtrunA17_Chr1g0153321 40.385 104 53 5 68 165 309 409 1.44e-11 65.5
Msa1223330 MtrunA17_Chr3g0123791 34.615 104 64 3 65 164 158 261 2.04e-11 64.3
Msa1223330 MtrunA17_Chr7g0227331 32.692 104 63 3 67 165 472 573 2.65e-11 64.7
Msa1223330 MtrunA17_Chr1g0167311 36.275 102 59 4 68 165 316 415 5.45e-11 63.9
Msa1223330 MtrunA17_Chr5g0402331 29.197 137 95 2 212 346 49 185 5.57e-11 61.2
Msa1223330 MtrunA17_Chr5g0426521 33.945 109 58 4 65 164 157 260 6.75e-11 62.8
Msa1223330 MtrunA17_Chr7g0234641 38.235 102 53 3 67 165 241 335 7.88e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223330 AT4G04720.2 81.250 304 55 2 52 354 226 528 0.0 518
Msa1223330 AT4G04720.1 81.250 304 55 2 52 354 226 528 0.0 518
Msa1223330 AT4G21940.1 79.344 305 60 2 52 354 248 551 0.0 514
Msa1223330 AT3G20410.2 79.264 299 62 0 52 350 237 535 0.0 513
Msa1223330 AT3G20410.1 79.264 299 62 0 52 350 237 535 0.0 513
Msa1223330 AT4G21940.2 79.344 305 60 2 52 354 248 551 0.0 513
Msa1223330 AT1G50700.1 78.878 303 64 0 52 354 219 521 0.0 511
Msa1223330 AT1G50700.2 72.644 329 64 1 52 354 219 547 5.95e-175 497
Msa1223330 AT1G61950.1 75.850 294 70 1 61 353 254 547 1.64e-165 474
Msa1223330 AT1G76040.1 72.727 297 80 1 56 352 24 319 2.06e-164 462
Msa1223330 AT1G76040.4 72.727 297 80 1 56 352 24 319 2.06e-164 462
Msa1223330 AT1G76040.2 73.973 292 75 1 61 352 267 557 2.71e-160 461
Msa1223330 AT4G04740.4 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1223330 AT4G04740.6 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1223330 AT4G04740.5 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1223330 AT4G04740.3 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1223330 AT4G04740.1 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1223330 AT4G04740.7 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1223330 AT4G23650.1 70.100 301 90 0 52 352 224 524 7.55e-159 456
Msa1223330 AT5G19360.1 70.307 293 87 0 60 352 222 514 4.41e-152 438
Msa1223330 AT5G12180.1 69.966 293 88 0 60 352 227 519 5.46e-151 436
Msa1223330 AT4G04740.2 74.815 270 67 1 61 330 224 492 1.41e-149 432
Msa1223330 AT4G04710.2 71.769 294 74 3 61 353 195 480 4.46e-149 429
Msa1223330 AT4G04710.3 71.769 294 74 3 61 353 181 466 4.49e-149 429
Msa1223330 AT4G04710.1 68.387 310 88 3 52 353 186 493 2.32e-148 428
Msa1223330 AT4G21940.3 83.966 237 37 1 61 297 257 492 1.63e-147 426
Msa1223330 AT1G50700.3 80.894 246 47 0 52 297 219 464 1.73e-147 425
Msa1223330 AT4G04710.4 67.949 312 88 4 52 353 186 495 2.92e-146 423
Msa1223330 AT4G04695.1 66.221 299 100 1 52 350 178 475 6.99e-141 409
Msa1223330 AT5G04870.1 62.583 302 112 1 52 353 296 596 6.60e-136 400
Msa1223330 AT4G04700.1 63.607 305 108 2 52 354 178 481 9.83e-136 395
Msa1223330 AT2G17290.1 62.373 295 110 1 52 346 231 524 1.37e-135 397
Msa1223330 AT2G17290.2 62.373 295 110 1 52 346 231 524 1.37e-135 397
Msa1223330 AT3G10660.2 62.252 302 113 1 52 353 332 632 1.75e-134 398
Msa1223330 AT3G10660.1 62.252 302 113 1 52 353 332 632 1.75e-134 398
Msa1223330 AT1G76040.3 75.314 239 58 1 61 299 267 504 1.15e-131 386
Msa1223330 AT4G38230.1 59.122 296 120 1 52 347 26 320 2.71e-131 379
Msa1223330 AT2G38910.1 60.751 293 114 1 52 344 280 571 1.73e-130 385
Msa1223330 AT4G35310.2 60.339 295 116 1 52 346 243 536 6.14e-130 383
Msa1223330 AT4G35310.1 60.339 295 116 1 52 346 243 536 6.14e-130 383
Msa1223330 AT4G38230.4 59.122 296 120 1 52 347 170 464 1.17e-129 380
Msa1223330 AT4G38230.3 59.122 296 120 1 52 347 170 464 1.17e-129 380
Msa1223330 AT1G35670.1 62.021 287 108 1 60 346 180 465 3.51e-129 379
Msa1223330 AT4G38230.2 59.122 296 120 1 52 347 200 494 3.98e-129 380
Msa1223330 AT4G09570.1 61.324 287 110 1 60 346 179 464 1.65e-127 375
Msa1223330 AT5G23580.1 58.362 293 121 1 52 344 168 459 1.05e-123 365
Msa1223330 AT3G51850.1 54.054 296 135 1 52 346 200 495 1.88e-116 348
Msa1223330 AT1G74740.1 53.378 296 137 1 52 346 205 500 6.46e-114 342
Msa1223330 AT1G18890.1 53.041 296 138 1 52 346 209 504 1.86e-111 335
Msa1223330 AT5G12480.2 51.515 297 142 1 52 346 111 407 6.59e-111 330
Msa1223330 AT5G12480.1 51.515 297 142 1 52 346 205 501 1.14e-109 330
Msa1223330 AT5G19450.2 51.178 297 143 2 52 346 203 499 8.92e-108 325
Msa1223330 AT5G19450.1 51.178 297 143 2 52 346 203 499 8.92e-108 325
Msa1223330 AT3G51850.2 53.047 279 130 1 52 329 200 478 1.27e-106 322
Msa1223330 AT3G57530.1 49.831 295 148 0 52 346 209 503 2.33e-105 320
Msa1223330 AT2G31500.1 49.164 299 148 1 52 346 212 510 3.64e-103 315
Msa1223330 AT2G41860.1 49.662 296 148 1 52 346 200 495 4.87e-103 313
Msa1223330 AT2G41860.2 49.662 296 148 1 52 346 200 495 8.73e-103 313
Msa1223330 AT2G17890.1 43.098 297 157 3 57 346 261 552 2.68e-83 264
Msa1223330 AT2G35890.2 51.724 232 111 1 52 282 278 509 1.22e-82 260
Msa1223330 AT2G35890.1 51.724 232 111 1 52 282 278 509 1.22e-82 260
Msa1223330 AT3G51850.3 53.456 217 101 0 52 268 200 416 4.55e-82 256
Msa1223330 AT5G66210.1 42.517 294 157 4 60 346 218 506 7.44e-81 256
Msa1223330 AT5G66210.2 42.517 294 157 4 60 346 218 506 7.44e-81 256
Msa1223330 AT4G36070.1 41.497 294 160 3 60 346 227 515 1.97e-79 253
Msa1223330 AT4G36070.2 41.497 294 160 3 60 346 227 515 5.43e-79 252
Msa1223330 AT5G66210.3 45.098 255 133 3 60 307 218 472 1.95e-75 241
Msa1223330 AT5G66210.5 45.238 252 131 3 60 304 218 469 3.84e-75 240
Msa1223330 AT3G57530.2 51.208 207 101 0 52 258 209 415 1.73e-73 234
Msa1223330 AT5G66210.6 46.701 197 104 1 60 255 218 414 2.65e-61 202
Msa1223330 AT5G66210.4 46.701 197 104 1 60 255 218 414 2.65e-61 202
Msa1223330 AT3G50530.1 32.872 289 185 4 60 343 306 590 2.10e-56 194
Msa1223330 AT3G50530.2 33.216 283 180 4 66 343 343 621 5.85e-56 193
Msa1223330 AT3G19100.1 33.564 289 183 4 60 343 302 586 8.56e-54 187
Msa1223330 AT1G49580.1 32.526 289 187 3 60 343 308 593 1.20e-53 186
Msa1223330 AT2G41140.1 32.180 289 187 4 60 343 281 565 1.89e-49 174
Msa1223330 AT3G56760.1 31.834 289 188 4 60 343 282 566 1.20e-48 172
Msa1223330 AT3G49370.1 34.420 276 168 6 66 336 306 573 5.99e-45 162
Msa1223330 AT2G46700.2 32.362 309 193 6 40 343 104 401 3.43e-44 157
Msa1223330 AT2G46700.3 32.362 309 193 6 40 343 104 401 3.43e-44 157
Msa1223330 AT2G46700.1 32.362 309 193 6 40 343 285 582 2.43e-43 158
Msa1223330 AT5G24430.1 34.940 249 154 4 66 309 307 552 4.18e-43 157
Msa1223330 AT1G12580.1 48.718 117 60 0 60 176 198 314 6.98e-34 131
Msa1223330 AT1G08650.1 40.800 125 73 1 52 175 160 284 2.59e-29 114
Msa1223330 AT1G12680.1 49.038 104 53 0 61 164 252 355 1.35e-27 113
Msa1223330 AT1G66410.1 40.136 147 84 3 200 343 1 146 3.68e-27 105
Msa1223330 AT5G37780.1 40.136 147 84 3 200 343 1 146 3.68e-27 105
Msa1223330 AT5G21274.1 39.456 147 85 3 200 343 1 146 8.73e-27 103
Msa1223330 AT3G56800.1 39.456 147 85 3 200 343 1 146 1.09e-26 103
Msa1223330 AT2G41110.1 39.456 147 85 3 200 343 1 146 1.09e-26 103
Msa1223330 AT2G27030.1 39.456 147 85 3 200 343 1 146 1.09e-26 103
Msa1223330 AT3G43810.1 39.456 147 85 3 200 343 1 146 1.39e-26 103
Msa1223330 AT2G27030.3 39.456 147 85 3 200 343 1 146 1.91e-26 104
Msa1223330 AT3G43810.2 39.456 147 85 3 200 343 1 146 4.02e-26 104
Msa1223330 AT3G04530.1 45.045 111 60 1 59 168 163 273 9.69e-26 104
Msa1223330 AT2G41110.2 36.025 161 87 4 200 345 1 160 9.72e-24 96.3
Msa1223330 AT5G37780.2 36.420 162 84 4 200 343 1 161 2.41e-23 95.5
Msa1223330 AT1G08650.2 39.655 116 67 2 52 166 160 273 3.52e-23 97.8
Msa1223330 AT3G59440.1 37.681 138 83 1 212 346 52 189 1.42e-22 94.4
Msa1223330 AT1G66410.2 37.580 157 84 4 200 343 1 156 1.98e-22 92.8
Msa1223330 AT5G37780.3 34.682 173 83 4 200 343 1 172 3.11e-22 92.8
Msa1223330 AT3G22930.1 36.364 143 87 3 204 343 28 169 5.93e-22 92.0
Msa1223330 AT5G37780.4 40.984 122 68 3 225 343 13 133 1.08e-21 90.1
Msa1223330 AT4G14640.1 36.806 144 85 4 204 343 6 147 1.70e-20 87.4
Msa1223330 AT1G05990.1 36.429 140 84 2 212 346 6 145 1.78e-20 87.0
Msa1223330 AT2G43290.1 35.417 144 84 2 212 346 66 209 1.88e-20 89.0
Msa1223330 AT2G41100.7 31.953 169 96 3 198 347 53 221 4.09e-20 89.7
Msa1223330 AT2G41100.7 33.083 133 70 5 239 352 5 137 1.13e-12 68.2
Msa1223330 AT2G41100.6 31.953 169 96 3 198 347 53 221 4.09e-20 89.7
Msa1223330 AT2G41100.6 33.083 133 70 5 239 352 5 137 1.13e-12 68.2
Msa1223330 AT2G41100.3 31.953 169 96 3 198 347 53 221 4.09e-20 89.7
Msa1223330 AT2G41100.3 33.083 133 70 5 239 352 5 137 1.13e-12 68.2
Msa1223330 AT2G41100.4 31.953 169 96 3 198 347 88 256 6.90e-20 89.4
Msa1223330 AT2G41100.4 32.558 172 97 5 200 352 1 172 4.30e-19 87.4
Msa1223330 AT2G41100.1 31.953 169 96 3 198 347 88 256 6.90e-20 89.4
Msa1223330 AT2G41100.1 32.558 172 97 5 200 352 1 172 4.30e-19 87.4
Msa1223330 AT3G50360.1 35.417 144 89 3 204 344 20 162 8.23e-19 83.2
Msa1223330 AT1G66410.4 40.741 108 60 3 239 343 4 110 1.17e-18 80.9
Msa1223330 AT1G66410.3 40.741 108 60 3 239 343 4 110 1.17e-18 80.9
Msa1223330 AT1G32250.1 31.847 157 95 3 200 346 5 159 1.78e-18 82.0
Msa1223330 AT3G43810.4 40.741 108 60 3 239 343 4 110 1.91e-18 80.5
Msa1223330 AT3G43810.3 40.741 108 60 3 239 343 4 110 1.91e-18 80.5
Msa1223330 AT2G45490.1 38.614 101 59 2 65 164 175 273 4.46e-18 84.0
Msa1223330 AT1G18530.1 34.028 144 87 3 206 343 2 143 8.52e-18 80.1
Msa1223330 AT2G41090.1 34.247 146 91 3 200 343 1 143 8.93e-18 80.9
Msa1223330 AT4G14640.2 38.211 123 70 4 225 343 9 129 9.07e-18 79.3
Msa1223330 AT4G03290.1 33.099 142 88 2 212 346 6 147 1.60e-17 79.3
Msa1223330 AT3G25600.1 33.333 150 92 3 200 343 1 148 1.81e-17 79.3
Msa1223330 AT1G30270.3 37.815 119 63 5 59 170 81 195 2.51e-17 82.8
Msa1223330 AT1G30270.1 37.815 119 63 5 59 170 178 292 3.43e-17 82.8
Msa1223330 AT1G30270.2 37.815 119 63 5 59 170 178 292 4.28e-17 82.8
Msa1223330 AT2G25090.1 42.574 101 52 4 68 166 184 280 6.66e-17 82.0
Msa1223330 AT2G25880.4 37.037 108 65 2 65 171 191 296 1.33e-16 79.7
Msa1223330 AT2G25880.2 37.037 108 65 2 65 171 146 251 1.47e-16 79.0
Msa1223330 AT2G25880.1 37.037 108 65 2 65 171 178 283 1.60e-16 79.3
Msa1223330 AT5G25110.1 39.130 115 59 4 59 166 189 299 1.62e-16 80.9
Msa1223330 AT5G10930.1 35.652 115 63 4 59 166 159 269 2.06e-16 80.5
Msa1223330 AT1G66400.1 32.903 155 89 5 200 343 1 151 2.09e-16 76.3
Msa1223330 AT4G32830.1 37.963 108 64 2 65 171 184 289 2.45e-16 79.0
Msa1223330 AT4G12860.1 34.532 139 87 2 212 346 6 144 2.66e-16 75.9
Msa1223330 AT2G25880.3 37.037 108 65 2 65 171 239 344 3.53e-16 79.0
Msa1223330 AT4G37010.1 32.877 146 90 4 204 344 20 162 5.52e-16 75.1
Msa1223330 AT4G37010.2 32.877 146 90 4 204 344 24 166 6.21e-16 75.1
Msa1223330 AT5G39440.1 40.000 105 58 2 61 164 170 270 6.28e-16 79.3
Msa1223330 AT2G15680.1 31.034 145 94 3 204 345 43 184 7.07e-16 75.5
Msa1223330 AT1G45160.2 36.585 123 63 5 51 165 841 956 1.44e-15 78.6
Msa1223330 AT4G30960.1 35.897 117 68 5 68 181 184 296 1.45e-15 77.8
Msa1223330 AT3G01090.3 39.252 107 59 2 61 165 170 272 1.80e-15 77.8
Msa1223330 AT3G01090.1 39.252 107 59 2 61 165 170 272 1.80e-15 77.8
Msa1223330 AT1G45160.1 36.585 123 63 5 51 165 841 956 2.00e-15 78.2
Msa1223330 AT3G01090.2 39.252 107 59 2 61 165 193 295 2.01e-15 77.8
Msa1223330 AT1G24620.1 34.266 143 88 3 208 346 34 174 2.11e-15 73.9
Msa1223330 AT3G07490.1 34.286 140 86 3 212 346 6 144 2.22e-15 73.2
Msa1223330 AT5G62310.1 38.889 108 53 4 67 166 943 1045 2.96e-15 77.8
Msa1223330 AT5G37770.1 32.168 143 87 4 212 346 18 158 3.05e-15 73.2
Msa1223330 AT5G37770.2 32.168 143 87 4 212 346 18 158 3.05e-15 73.2
Msa1223330 AT2G30360.1 32.143 140 84 5 60 192 175 310 5.12e-15 76.3
Msa1223330 AT3G51920.1 31.507 146 98 2 200 343 1 146 9.73e-15 71.2
Msa1223330 AT3G29160.3 39.252 107 59 2 61 165 171 273 2.15e-14 73.9
Msa1223330 AT3G29160.1 39.252 107 59 2 61 165 171 273 2.98e-14 74.3
Msa1223330 AT3G29160.2 39.252 107 59 2 61 165 171 273 2.98e-14 74.3
Msa1223330 AT4G26470.1 25.604 207 129 4 153 339 5 206 3.31e-14 71.6
Msa1223330 AT1G01140.3 37.255 102 58 4 68 167 180 277 3.67e-14 73.6
Msa1223330 AT4G26470.3 25.561 223 139 5 139 339 52 269 3.78e-14 72.4
Msa1223330 AT1G01140.1 37.255 102 58 4 68 167 180 277 3.87e-14 73.6
Msa1223330 AT2G26980.1 39.604 101 55 4 68 166 175 271 4.25e-14 73.2
Msa1223330 AT1G01140.2 35.294 102 62 3 68 167 180 279 5.35e-14 73.2
Msa1223330 AT5G58380.1 35.965 114 67 4 68 179 172 281 6.82e-14 73.2
Msa1223330 AT4G40010.1 39.252 107 61 4 65 167 157 263 7.60e-14 72.4
Msa1223330 AT2G36180.1 28.369 141 92 3 212 345 1 139 7.95e-14 68.6
Msa1223330 AT1G73630.1 31.387 137 86 4 212 345 21 152 9.53e-14 68.9
Msa1223330 AT1G18210.2 32.331 133 86 3 212 343 24 153 1.19e-13 68.9
Msa1223330 AT1G18210.1 32.331 133 86 3 212 343 24 153 1.19e-13 68.9
Msa1223330 AT3G22930.2 34.314 102 66 1 204 304 28 129 1.29e-13 67.8
Msa1223330 AT5G01810.1 34.314 102 61 3 68 167 172 269 1.34e-13 72.0
Msa1223330 AT5G01810.2 34.314 102 61 3 68 167 172 269 1.34e-13 72.0
Msa1223330 AT5G01810.3 34.314 102 61 3 68 167 172 269 1.34e-13 71.6
Msa1223330 AT5G57630.3 28.283 198 122 6 61 255 74 254 1.39e-13 71.2
Msa1223330 AT5G42380.1 31.206 141 90 3 209 344 47 185 1.50e-13 68.9
Msa1223330 AT4G18700.1 35.514 107 63 4 63 167 181 283 1.55e-13 72.0
Msa1223330 AT1G48490.4 37.273 110 56 4 65 166 1010 1114 1.81e-13 72.4
Msa1223330 AT1G48490.3 37.273 110 56 4 65 166 1009 1113 2.01e-13 72.0
Msa1223330 AT1G48490.2 37.273 110 56 4 65 166 1009 1113 2.01e-13 72.0
Msa1223330 AT1G48490.1 37.273 110 56 4 65 166 1009 1113 2.01e-13 72.0
Msa1223330 AT5G35410.2 37.736 106 60 4 62 165 164 265 2.24e-13 70.9
Msa1223330 AT5G21326.1 38.614 101 56 4 68 166 174 270 2.48e-13 71.2
Msa1223330 AT3G61960.1 34.188 117 75 2 58 172 160 276 2.70e-13 71.2
Msa1223330 AT3G17510.2 26.222 225 124 6 68 263 101 312 2.72e-13 70.9
Msa1223330 AT3G17510.1 26.222 225 124 6 68 263 181 392 2.80e-13 70.9
Msa1223330 AT3G61960.2 34.188 117 75 2 58 172 160 276 3.02e-13 71.2
Msa1223330 AT5G35410.1 37.736 106 60 4 62 165 164 265 3.94e-13 70.5
Msa1223330 AT3G17850.1 37.273 110 56 4 65 166 1069 1173 4.00e-13 71.2
Msa1223330 AT5G57630.2 28.788 198 121 7 61 255 162 342 4.31e-13 70.5
Msa1223330 AT5G57630.1 28.788 198 121 7 61 255 162 342 4.72e-13 70.1
Msa1223330 AT5G45810.1 35.514 107 63 5 63 167 183 285 6.02e-13 70.1
Msa1223330 AT2G41100.2 32.031 128 68 3 239 347 4 131 6.89e-13 67.4
Msa1223330 AT3G10190.1 30.827 133 85 3 216 343 75 205 7.84e-13 67.4
Msa1223330 AT1G48260.2 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1223330 AT1G48260.4 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1223330 AT1G48260.3 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1223330 AT1G48260.5 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1223330 AT5G45820.1 33.028 109 67 4 68 174 172 276 1.12e-12 69.3
Msa1223330 AT5G07070.1 38.235 102 57 4 68 167 172 269 1.23e-12 68.9
Msa1223330 AT5G08590.2 34.951 103 63 3 65 163 81 183 1.26e-12 67.8
Msa1223330 AT5G07320.1 28.966 145 96 3 196 339 23 161 1.43e-12 68.9
Msa1223330 AT2G34180.1 35.514 107 63 4 63 167 212 314 1.54e-12 68.9
Msa1223330 AT5G08590.1 34.951 103 63 3 65 163 157 259 1.66e-12 68.2
Msa1223330 AT4G20780.1 27.215 158 89 3 212 345 30 185 3.07e-12 65.1
Msa1223330 AT3G03000.1 31.081 148 93 4 204 345 13 157 3.16e-12 64.7
Msa1223330 AT1G76640.1 31.034 145 92 3 206 344 17 159 3.27e-12 64.3
Msa1223330 AT5G17470.1 28.148 135 89 3 215 343 6 138 5.70e-12 63.5
Msa1223330 AT1G10940.2 33.654 104 65 3 65 164 165 268 7.29e-12 66.2
Msa1223330 AT1G10940.1 33.654 104 65 3 65 164 157 260 8.08e-12 66.2
Msa1223330 AT4G14640.3 34.951 103 64 2 204 304 6 107 1.17e-11 61.6
Msa1223330 AT5G09890.2 36.283 113 65 4 68 176 305 414 1.54e-11 65.9
Msa1223330 AT5G09890.1 36.283 113 65 4 68 176 305 414 1.58e-11 65.9
Msa1223330 AT5G63650.1 33.981 103 64 3 65 163 157 259 1.95e-11 65.1
Msa1223330 AT1G12310.1 28.472 144 99 3 202 343 4 145 1.95e-11 62.0
Msa1223330 AT1G59580.2 34.028 144 64 5 61 174 187 329 2.01e-11 65.1
Msa1223330 AT1G59580.1 34.028 144 64 5 61 174 187 329 2.01e-11 65.1
Msa1223330 AT4G26470.2 25.140 179 110 3 153 312 5 178 2.42e-11 63.2
Msa1223330 AT1G76650.1 29.577 142 95 2 206 344 38 177 2.86e-11 62.0
Msa1223330 AT1G76650.3 29.577 142 95 2 206 344 38 177 2.86e-11 62.0
Msa1223330 AT4G33950.2 33.654 104 65 3 65 164 174 277 3.29e-11 64.3
Msa1223330 AT1G60940.1 31.731 104 67 2 65 164 157 260 3.33e-11 64.3
Msa1223330 AT1G60940.2 31.731 104 67 2 65 164 157 260 3.33e-11 64.3
Msa1223330 AT4G33950.1 33.654 104 65 3 65 164 174 277 4.47e-11 63.9
Msa1223330 AT3G27580.2 31.731 104 64 3 67 165 416 517 5.32e-11 64.3
Msa1223330 AT3G27580.1 31.731 104 64 3 67 165 416 517 5.32e-11 64.3
Msa1223330 AT1G03920.1 35.644 101 60 3 68 164 336 435 8.18e-11 63.5
Msa1223330 AT1G03920.3 35.644 101 60 3 68 164 336 435 8.18e-11 63.5
Msa1223330 AT1G62820.1 27.778 144 100 3 202 343 4 145 8.65e-11 60.1

Find 117 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACCTTGCTACGAAAAT+TGG 0.123518 8_1:-87782900 None:intergenic
TTTGTAAGTTTCACCTTATT+TGG 0.139591 8_1:+87783237 Msa1223330:three_prime_UTR
AATAGATTATCAATACATTA+TGG 0.221338 8_1:-87783148 None:intergenic
ATACGTCTTGTTTCCAAATA+AGG 0.230554 8_1:-87783250 None:intergenic
GTAGAAGTGATTCTCTTCTT+TGG 0.233824 8_1:-87780546 None:intergenic
GGGAATATTTAATGCTATAT+TGG 0.238862 8_1:+87780437 Msa1223330:CDS
AAGAAGTGTCTTGCATATTC+TGG 0.250425 8_1:-87782841 None:intergenic
AAAGAAAGGCTCTTGTTAAT+AGG 0.251209 8_1:-87783217 None:intergenic
GACTAGATCTTTGGCACTTT+CGG 0.279414 8_1:-87780502 None:intergenic
TATCTAGAATGAAACAATTC+AGG 0.281671 8_1:+87780976 Msa1223330:CDS
CATCTTCCGGACTAGATCTT+TGG 0.322108 8_1:-87780511 None:intergenic
TTACTTCCTCATACGGGTTA+AGG 0.329243 8_1:-87783105 None:intergenic
TTATCAGAAGAAGAGATTAA+AGG 0.339374 8_1:+87781532 Msa1223330:CDS
GTGATTCTCTTCTTTGGATC+TGG 0.341020 8_1:-87780540 None:intergenic
CAGTGTTATGCTCTTATTTG+TGG 0.351178 8_1:+87783047 Msa1223330:three_prime_UTR
ATCGAGAGACTTAACGTTGT+TGG 0.351564 8_1:+87782802 Msa1223330:three_prime_UTR
CAGGCTGATGTTGATGGAAA+TGG 0.357534 8_1:+87781782 Msa1223330:intron
GTTCAAGAAACTTGCATTGA+AGG 0.357996 8_1:+87781010 Msa1223330:CDS
GATCTGGTGTCAGCATCTTC+CGG 0.364087 8_1:-87780524 None:intergenic
GTTTCTCAGGCTGATGTTGA+TGG 0.365465 8_1:+87781776 Msa1223330:intron
AGGAAAAGTTTACCGTGATA+TGG 0.368012 8_1:+87780178 Msa1223330:intron
ATATTGTATATTCTGCTTAG+TGG 0.368948 8_1:+87780281 Msa1223330:CDS
GGAAAAGGAAGAAAAGAAAA+GGG 0.370659 8_1:-87783196 None:intergenic
TGCACTATCAATCGGTTTAT+CGG 0.370947 8_1:-87780949 None:intergenic
TATTGTCCTTATCAAAATAC+TGG 0.372678 8_1:-87781886 None:intergenic
ATATGCAAGACACTTCTTCA+TGG 0.378069 8_1:+87782846 Msa1223330:three_prime_UTR
GCATATTACTAGAGAAGAAT+TGG 0.378804 8_1:+87782500 Msa1223330:CDS
AAGACAGGCTTGGCTCGAAT+TGG 0.380610 8_1:+87781619 Msa1223330:CDS
ATTCAGTGGATTTAAAATAA+TGG 0.380620 8_1:-87782741 None:intergenic
TTGGCACTTTCGGATATTGA+TGG 0.388440 8_1:-87780492 None:intergenic
AGGAATTACATGTTGCTTCC+TGG 0.391233 8_1:+87780098 Msa1223330:CDS
GAGGTACTTCGTCGTAATTA+TGG 0.392346 8_1:+87780227 Msa1223330:CDS
CAAGGCAATGTTTGCAAACA+TGG 0.398987 8_1:+87781558 Msa1223330:CDS
ATAGATTATCAATACATTAT+GGG 0.400306 8_1:-87783147 None:intergenic
AGGAAAAGGAAGAAAAGAAA+AGG 0.400576 8_1:-87783197 None:intergenic
ACAACCTTGCTACGAAAATT+GGG 0.403439 8_1:-87782899 None:intergenic
GGGTGATGAAGCAACGATAA+AGG 0.405663 8_1:+87782548 Msa1223330:CDS
TTTCTTTGCAGAAACTGAAA+AGG 0.406051 8_1:+87780416 Msa1223330:intron
TTGATCTTACCAGCCCAAAA+AGG 0.410879 8_1:-87780311 None:intergenic
GGCTGAAGTGAAACAGCTTA+TGG 0.411627 8_1:+87781657 Msa1223330:CDS
ATGGATTGGTGAATACTTTG+AGG 0.416185 8_1:+87782865 Msa1223330:three_prime_UTR
GGCTGAGATTATGTATCTTC+AGG 0.419557 8_1:+87783273 Msa1223330:three_prime_UTR
TGACTATCTTGAATTCATAT+CGG 0.419719 8_1:+87781811 Msa1223330:CDS
ACGGGCAGTAAACTCATCTT+TGG 0.421789 8_1:-87778765 None:intergenic
ATGGAAAGGAAATAGACATT+TGG 0.433084 8_1:+87780246 Msa1223330:CDS
CGTTAAGTCTCTCGATCAAT+TGG 0.437925 8_1:-87782795 None:intergenic
GATTATTGTGGTAGTTTCAA+AGG 0.457359 8_1:+87780078 Msa1223330:intron
AGAAGTGTCTTGCATATTCT+GGG 0.459931 8_1:-87782840 None:intergenic
TCTACACCGGCGGGACGAGA+AGG 0.465989 8_1:-87778827 None:intergenic
AGGCTCTTGTTAATAGGAAA+AGG 0.469836 8_1:-87783211 None:intergenic
CAAGACACTTCTTCATGGAT+TGG 0.470691 8_1:+87782851 Msa1223330:three_prime_UTR
TATGCTCTTATTTGTGGTAG+AGG 0.471159 8_1:+87783053 Msa1223330:three_prime_UTR
CTCCACCTTCTCTCATCCAC+GGG 0.480309 8_1:-87780920 None:intergenic
CTACACCGGCGGGACGAGAA+GGG 0.480585 8_1:-87778826 None:intergenic
TGATTTCCTTAACCCGTATG+AGG 0.480616 8_1:+87783099 Msa1223330:three_prime_UTR
AAGGTGAAACTTACAAAGAA+AGG 0.486239 8_1:-87783231 None:intergenic
CTTTCGGATATTGATGGCCA+TGG 0.487626 8_1:-87780486 None:intergenic
TTCTTTGCAGAAACTGAAAA+GGG 0.488753 8_1:+87780417 Msa1223330:intron
TCTCCACCTTCTCTCATCCA+CGG 0.506735 8_1:-87780921 None:intergenic
TTACATCAATGTTCCACCTC+AGG 0.510312 8_1:+87778862 Msa1223330:CDS
TAATTACGACGAAGTACCTC+AGG 0.516147 8_1:-87780224 None:intergenic
GATAGAACTGCACTATCAAT+CGG 0.519441 8_1:-87780957 None:intergenic
GGATGGGAGAATAAATTATG+AGG 0.522634 8_1:+87782677 Msa1223330:intron
ATCTAGAATGAAACAATTCA+GGG 0.522998 8_1:+87780977 Msa1223330:CDS
GAAATAGACATTTGGAGTGC+AGG 0.527784 8_1:+87780254 Msa1223330:CDS
AAATTCAGGCTCAAGACACT+TGG 0.528956 8_1:-87783008 None:intergenic
AGAAGAGATTAAAGGTCTCA+AGG 0.531463 8_1:+87781540 Msa1223330:CDS
ATATTTAATGCTATATTGGA+AGG 0.532580 8_1:+87780441 Msa1223330:CDS
AAAGTGCCAAAGATCTAGTC+CGG 0.532656 8_1:+87780505 Msa1223330:CDS
TACACCGGCGGGACGAGAAG+GGG 0.532694 8_1:-87778825 None:intergenic
GAAAAGGAAGAAAAGAAAAG+GGG 0.533008 8_1:-87783195 None:intergenic
ATCACTTCTACAGAAGTCCT+TGG 0.539145 8_1:+87780558 Msa1223330:CDS
AGGCTGATGTTGATGGAAAT+GGG 0.539230 8_1:+87781783 Msa1223330:intron
GAGAAGTGGAATGCCACACC+AGG 0.542008 8_1:+87782716 Msa1223330:CDS
ACCCATTCCATGCTTTGTCA+TGG 0.542168 8_1:-87782529 None:intergenic
TGAAGAACTGAAGACAGGCT+TGG 0.551989 8_1:+87781609 Msa1223330:CDS
TTATTTGGAAACAAGACGTA+TGG 0.553900 8_1:+87783252 Msa1223330:three_prime_UTR
GCATAGGCACAGACTTGAGC+GGG 0.554226 8_1:+87781841 Msa1223330:CDS
TAAAATAATGGTCCCTGGTG+TGG 0.556346 8_1:-87782729 None:intergenic
TGCCATGACAAAGCATGGAA+TGG 0.558094 8_1:+87782527 Msa1223330:CDS
GCCATGACAAAGCATGGAAT+GGG 0.560994 8_1:+87782528 Msa1223330:CDS
AGGTGATGATCTATGATGAC+GGG 0.562566 8_1:-87778783 None:intergenic
GAGACTGCCATGACAAAGCA+TGG 0.567560 8_1:+87782522 Msa1223330:CDS
TTCTGTGCAATGATGAGAAG+TGG 0.569079 8_1:+87782702 Msa1223330:CDS
ACACCGGCGGGACGAGAAGG+GGG 0.572200 8_1:-87778824 None:intergenic
GGATTTAAAATAATGGTCCC+TGG 0.579689 8_1:-87782734 None:intergenic
TGCTTACTATGTTGCCCCTG+AGG 0.582552 8_1:+87780208 Msa1223330:CDS
GGTAGAGGAAAGAATAATCA+CGG 0.583369 8_1:+87783068 Msa1223330:three_prime_UTR
CACCCGTGGATGAGAGAAGG+TGG 0.586292 8_1:+87780918 Msa1223330:CDS
AAAGGAAATCATTTCTGAGG+TGG 0.586336 8_1:+87782566 Msa1223330:CDS
ACTTATGAAGAACTGAAGAC+AGG 0.591721 8_1:+87781604 Msa1223330:CDS
GATAAAGGAAATCATTTCTG+AGG 0.597584 8_1:+87782563 Msa1223330:CDS
AATTGGATCAAGACTGTCTG+AGG 0.601026 8_1:+87781636 Msa1223330:CDS
ACTTCGTCGTAATTATGGAA+AGG 0.604529 8_1:+87780232 Msa1223330:CDS
TAGATTATCAATACATTATG+GGG 0.607292 8_1:-87783146 None:intergenic
CAGGTGATGATCTATGATGA+CGG 0.609122 8_1:-87778784 None:intergenic
TCATATCGGCTACAATGCAT+AGG 0.609185 8_1:+87781825 Msa1223330:CDS
TAATTACTATCTACACCGGC+GGG 0.612569 8_1:-87778836 None:intergenic
CACACAATAATGGGTTGTCA+CGG 0.619723 8_1:+87778722 None:intergenic
AAAGTTTACCGTGATATGGT+AGG 0.622747 8_1:+87780182 Msa1223330:CDS
GAACACCCGTGGATGAGAGA+AGG 0.623419 8_1:+87780915 Msa1223330:intron
ATGAAATCGACTCCATTCAG+TGG 0.631210 8_1:-87782755 None:intergenic
AATGGGTTGTCACGGCAGCA+AGG 0.638772 8_1:+87778730 None:intergenic
ATAATTACTATCTACACCGG+CGG 0.640233 8_1:-87778837 None:intergenic
TCGACTTTGTTAGTGAACCA+TGG 0.641429 8_1:+87780469 Msa1223330:CDS
GTAGAGGAAAGAATAATCAC+GGG 0.643516 8_1:+87783069 Msa1223330:three_prime_UTR
GAAGACTGTTGAACCTGAGG+TGG 0.650345 8_1:-87778875 None:intergenic
ACGATAATTACTATCTACAC+CGG 0.650389 8_1:-87778840 None:intergenic
TGCATAGGCACAGACTTGAG+CGG 0.654593 8_1:+87781840 Msa1223330:CDS
ACTATCAATCGGTTTATCGG+AGG 0.661244 8_1:-87780946 None:intergenic
TTGTTTGGCAAGAACACCCG+TGG 0.663475 8_1:+87780904 Msa1223330:intron
GAGGAAAGAATAATCACGGG+AGG 0.675004 8_1:+87783072 Msa1223330:three_prime_UTR
AATTACGACGAAGTACCTCA+GGG 0.677091 8_1:-87780223 None:intergenic
AAGCACTGCCTACCATATCA+CGG 0.680125 8_1:-87780190 None:intergenic
AACATGGACACTGATAGTAG+TGG 0.718728 8_1:+87781574 Msa1223330:CDS
AGAAGTGGAATGCCACACCA+GGG 0.724546 8_1:+87782717 Msa1223330:CDS
ATTACGACGAAGTACCTCAG+GGG 0.803244 8_1:-87780222 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAAATAAATAAAAA+TGG - chr8_1:87780665-87780684 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTATATAT+GGG - chr8_1:87781943-87781962 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTATATA+TGG - chr8_1:87781944-87781963 None:intergenic 0.0%
!!! TGTGATATATTTATAGTTTT+TGG + chr8_1:87780348-87780367 Msa1223330:intron 15.0%
!!! TTGAAAAATTAACACTTTTA+TGG + chr8_1:87780383-87780402 Msa1223330:intron 15.0%
!!! ATAAAGTGAAGTTTTTATTA+TGG - chr8_1:87782337-87782356 None:intergenic 15.0%
!! TGTTAAAATTGTAAGATTTA+TGG + chr8_1:87782439-87782458 Msa1223330:intron 15.0%
!! ATAGATTATCAATACATTAT+GGG - chr8_1:87783150-87783169 None:intergenic 15.0%
!! AATAGATTATCAATACATTA+TGG - chr8_1:87783151-87783170 None:intergenic 15.0%
!! AACTTCTTTATATCTTCATA+GGG - chr8_1:87778995-87779014 None:intergenic 20.0%
!! AAACTTCTTTATATCTTCAT+AGG - chr8_1:87778996-87779015 None:intergenic 20.0%
!! AAAAATAAGTAATCCCAAAT+TGG - chr8_1:87779048-87779067 None:intergenic 20.0%
!!! TTAGTTTGATTGATATCTAA+TGG + chr8_1:87779662-87779681 Msa1223330:intron 20.0%
!! AAATAGTAAATCAGATAAGT+TGG + chr8_1:87779963-87779982 Msa1223330:intron 20.0%
!!! AAAAATTAACACTTTTATGG+TGG + chr8_1:87780386-87780405 Msa1223330:intron 20.0%
!!! AAAATTAACACTTTTATGGT+GGG + chr8_1:87780387-87780406 Msa1223330:intron 20.0%
!! ATATTTAATGCTATATTGGA+AGG + chr8_1:87780441-87780460 Msa1223330:CDS 20.0%
!! TAGTATGTATTACAATACTT+GGG - chr8_1:87780785-87780804 None:intergenic 20.0%
!! ATAGTATGTATTACAATACT+TGG - chr8_1:87780786-87780805 None:intergenic 20.0%
!!! ACTATGATTAATGATTTGTT+TGG + chr8_1:87780889-87780908 Msa1223330:intron 20.0%
!!! ATATTGAACTCTAAAGTTTA+TGG + chr8_1:87781345-87781364 Msa1223330:intron 20.0%
!!! AGAGTTTTCTTGATTAATTT+AGG - chr8_1:87782613-87782632 None:intergenic 20.0%
!!! ATTCAGTGGATTTAAAATAA+TGG - chr8_1:87782744-87782763 None:intergenic 20.0%
!!! ATTATTTTAAATCCACTGAA+TGG + chr8_1:87782743-87782762 Msa1223330:exon 20.0%
!!! TCTTTATACATTTTAGTTTC+AGG + chr8_1:87782973-87782992 Msa1223330:three_prime_UTR 20.0%
!! AGCATTTAACATAAAAATTC+AGG - chr8_1:87783025-87783044 None:intergenic 20.0%
!! GAAGTAAAAACTCAAATATA+TGG + chr8_1:87783121-87783140 Msa1223330:three_prime_UTR 20.0%
!! TAGATTATCAATACATTATG+GGG - chr8_1:87783149-87783168 None:intergenic 20.0%
!! ATAAAGAAGTTTTACACTCT+AGG + chr8_1:87779004-87779023 Msa1223330:intron 25.0%
! CGTGTAAATCTATATTAAAG+AGG + chr8_1:87779098-87779117 Msa1223330:intron 25.0%
! CCTTTAAACTCAACAATATT+CGG - chr8_1:87779196-87779215 None:intergenic 25.0%
! CACATAATTTAAACATTAGC+AGG - chr8_1:87779544-87779563 None:intergenic 25.0%
! GGTTATTATATTTGCTTGTT+AGG + chr8_1:87779600-87779619 Msa1223330:intron 25.0%
! ACGAAAATACAATCTTTGTT+AGG - chr8_1:87779931-87779950 None:intergenic 25.0%
!! ACAAAGATTGTATTTTCGTT+TGG + chr8_1:87779932-87779951 Msa1223330:intron 25.0%
!! GTGTTACTGTAATTTATTTC+AGG + chr8_1:87780158-87780177 Msa1223330:intron 25.0%
! ATATTGTATATTCTGCTTAG+TGG + chr8_1:87780281-87780300 Msa1223330:CDS 25.0%
!! AAATTAACACTTTTATGGTG+GGG + chr8_1:87780388-87780407 Msa1223330:intron 25.0%
! GGGAATATTTAATGCTATAT+TGG + chr8_1:87780437-87780456 Msa1223330:CDS 25.0%
!! TAGTTCTTCTTTTAATCAAG+TGG + chr8_1:87780634-87780653 Msa1223330:intron 25.0%
!! CATTTGAAACAAAAAGTCAA+AGG - chr8_1:87780726-87780745 None:intergenic 25.0%
! ACAAATCATTAATCATAGTC+AGG - chr8_1:87780888-87780907 None:intergenic 25.0%
!! TATCTAGAATGAAACAATTC+AGG + chr8_1:87780976-87780995 Msa1223330:CDS 25.0%
!! ATCTAGAATGAAACAATTCA+GGG + chr8_1:87780977-87780996 Msa1223330:CDS 25.0%
! ACCAACACAAATGAATTTAT+TGG - chr8_1:87781234-87781253 None:intergenic 25.0%
!! GTTTCTTGTAAAGTTTTCTT+TGG + chr8_1:87781252-87781271 Msa1223330:intron 25.0%
! TTGACATAAAACAGAAAAAC+TGG + chr8_1:87781321-87781340 Msa1223330:intron 25.0%
!! GATATTTTTCTCCATTAACT+TGG + chr8_1:87781479-87781498 Msa1223330:intron 25.0%
! TTATCAGAAGAAGAGATTAA+AGG + chr8_1:87781532-87781551 Msa1223330:CDS 25.0%
! TGACTATCTTGAATTCATAT+CGG + chr8_1:87781811-87781830 Msa1223330:CDS 25.0%
! TATTGTCCTTATCAAAATAC+TGG - chr8_1:87781889-87781908 None:intergenic 25.0%
!!! TATTTTGATAAGGACAATAG+TGG + chr8_1:87781890-87781909 Msa1223330:CDS 25.0%
!!! ATTTTGATAAGGACAATAGT+GGG + chr8_1:87781891-87781910 Msa1223330:CDS 25.0%
! TTTAATCTCTAAGTCAATGT+TGG + chr8_1:87782127-87782146 Msa1223330:intron 25.0%
! GGGTTAGGAAAAAATAAATA+AGG - chr8_1:87782243-87782262 None:intergenic 25.0%
!! AAGTGAAGTTTTTATTATGG+TGG - chr8_1:87782334-87782353 None:intergenic 25.0%
! CTAATGATTCTTAAACAAAC+AGG + chr8_1:87782656-87782675 Msa1223330:intron 25.0%
! TTTGTAAGTTTCACCTTATT+TGG + chr8_1:87783237-87783256 Msa1223330:three_prime_UTR 25.0%
ACGATAATTACTATCTACAC+CGG - chr8_1:87778843-87778862 None:intergenic 30.0%
TTACACTCTAGGTAAAGAAT+TGG + chr8_1:87779015-87779034 Msa1223330:intron 30.0%
TACACTCTAGGTAAAGAATT+GGG + chr8_1:87779016-87779035 Msa1223330:intron 30.0%
! TTTTGTACTGAGAATTCAAC+CGG + chr8_1:87779064-87779083 Msa1223330:intron 30.0%
TTTACACGCGTAATTTAAAC+CGG - chr8_1:87779086-87779105 None:intergenic 30.0%
CCGAATATTGTTGAGTTTAA+AGG + chr8_1:87779193-87779212 Msa1223330:intron 30.0%
!!! TGTGCACATTTGTCATTTTA+TGG + chr8_1:87779351-87779370 Msa1223330:intron 30.0%
!!! GTGCACATTTGTCATTTTAT+GGG + chr8_1:87779352-87779371 Msa1223330:intron 30.0%
! GAATTTCTTGCTTTCTAGTA+AGG + chr8_1:87779402-87779421 Msa1223330:intron 30.0%
CTTTCTGTCTTTATTGAAGA+AGG + chr8_1:87779460-87779479 Msa1223330:intron 30.0%
CTCTCAAAACTATCTATGTT+TGG + chr8_1:87779579-87779598 Msa1223330:intron 30.0%
! GAGTTTGAGTTATAACTCAT+TGG + chr8_1:87779714-87779733 Msa1223330:intron 30.0%
TAAAGATCAAGTTAGACTTG+AGG - chr8_1:87779777-87779796 None:intergenic 30.0%
AACTTGATCTTTAACATGAG+TGG + chr8_1:87779784-87779803 Msa1223330:intron 30.0%
TCAATCTTACAACAACAAGT+TGG - chr8_1:87779856-87779875 None:intergenic 30.0%
! CAAGTATCATATCTTTTCGA+TGG - chr8_1:87779904-87779923 None:intergenic 30.0%
GTTTCTATTCCATATTCAGT+AGG + chr8_1:87779985-87780004 Msa1223330:intron 30.0%
CTGATTGTGTTTGATTATTG+TGG + chr8_1:87780066-87780085 Msa1223330:intron 30.0%
GATTATTGTGGTAGTTTCAA+AGG + chr8_1:87780078-87780097 Msa1223330:intron 30.0%
ATGGAAAGGAAATAGACATT+TGG + chr8_1:87780246-87780265 Msa1223330:CDS 30.0%
TTTCTTTGCAGAAACTGAAA+AGG + chr8_1:87780416-87780435 Msa1223330:intron 30.0%
TTCTTTGCAGAAACTGAAAA+GGG + chr8_1:87780417-87780436 Msa1223330:intron 30.0%
TTTAGATGCTAAACTGATAC+TGG - chr8_1:87780696-87780715 None:intergenic 30.0%
TGAAACAAAAAGTCAAAGGA+GGG - chr8_1:87780722-87780741 None:intergenic 30.0%
TTGAAACAAAAAGTCAAAGG+AGG - chr8_1:87780723-87780742 None:intergenic 30.0%
GAAAATGCAAATCAATGATG+AGG - chr8_1:87780833-87780852 None:intergenic 30.0%
! TCTAACTTTTCTATCACACA+TGG + chr8_1:87780862-87780881 Msa1223330:intron 30.0%
!! TGTTTTGTGTCCTTTTTTGT+CGG + chr8_1:87781064-87781083 Msa1223330:intron 30.0%
TGTCTGTAGAAATGGTATTA+TGG + chr8_1:87781091-87781110 Msa1223330:intron 30.0%
GCATTTATACAGCTTAATAG+TGG - chr8_1:87781212-87781231 None:intergenic 30.0%
GCCAATAAATTCATTTGTGT+TGG + chr8_1:87781230-87781249 Msa1223330:intron 30.0%
GTTCTATGAGTTTCATATTC+TGG + chr8_1:87781443-87781462 Msa1223330:intron 30.0%
!!! ATATTCTGGCTTATCTTTTC+TGG + chr8_1:87781457-87781476 Msa1223330:intron 30.0%
!! ATTTTTCTCCATTAACTTGG+TGG + chr8_1:87781482-87781501 Msa1223330:intron 30.0%
AGAAATTTCCACCAAGTTAA+TGG - chr8_1:87781493-87781512 None:intergenic 30.0%
CACAGTTTCTGTTAAGTTTA+GGG - chr8_1:87781742-87781761 None:intergenic 30.0%
ACACAGTTTCTGTTAAGTTT+AGG - chr8_1:87781743-87781762 None:intergenic 30.0%
TCTTATGTATAACGTTTCTC+AGG + chr8_1:87781763-87781782 Msa1223330:intron 30.0%
!!! AGCATTCCAGTATTTTGATA+AGG + chr8_1:87781880-87781899 Msa1223330:CDS 30.0%
CGTTCAAACACAAAATGATT+TGG - chr8_1:87781969-87781988 None:intergenic 30.0%
GCATATTACTAGAGAAGAAT+TGG + chr8_1:87782500-87782519 Msa1223330:CDS 30.0%
GATAAAGGAAATCATTTCTG+AGG + chr8_1:87782563-87782582 Msa1223330:CDS 30.0%
TGATTCTTAAACAAACAGGA+TGG + chr8_1:87782660-87782679 Msa1223330:intron 30.0%
GATTCTTAAACAAACAGGAT+GGG + chr8_1:87782661-87782680 Msa1223330:intron 30.0%
! TGAGTTTTTACTTCCTCATA+CGG - chr8_1:87783115-87783134 None:intergenic 30.0%
GAAAAGGAAGAAAAGAAAAG+GGG - chr8_1:87783198-87783217 None:intergenic 30.0%
GGAAAAGGAAGAAAAGAAAA+GGG - chr8_1:87783199-87783218 None:intergenic 30.0%
AGGAAAAGGAAGAAAAGAAA+AGG - chr8_1:87783200-87783219 None:intergenic 30.0%
AAAGAAAGGCTCTTGTTAAT+AGG - chr8_1:87783220-87783239 None:intergenic 30.0%
AAGGTGAAACTTACAAAGAA+AGG - chr8_1:87783234-87783253 None:intergenic 30.0%
!! ATACGTCTTGTTTCCAAATA+AGG - chr8_1:87783253-87783272 None:intergenic 30.0%
TTATTTGGAAACAAGACGTA+TGG + chr8_1:87783252-87783271 Msa1223330:three_prime_UTR 30.0%
ATAATTACTATCTACACCGG+CGG - chr8_1:87778840-87778859 None:intergenic 35.0%
!! AAGGTTGATACAACCATCTT+AGG + chr8_1:87778965-87778984 Msa1223330:intron 35.0%
TTCATAGGGTTTACCTAAGA+TGG - chr8_1:87778981-87779000 None:intergenic 35.0%
!! TGAGTTTAAAGGTGCTTATG+AGG + chr8_1:87779204-87779223 Msa1223330:intron 35.0%
TTTGACAGGATTATTGCTCA+AGG + chr8_1:87779277-87779296 Msa1223330:intron 35.0%
CTAGAAAGCAAGAAATTCTC+AGG - chr8_1:87779400-87779419 None:intergenic 35.0%
! TTGCTTTCTAGTAAGGATGA+TGG + chr8_1:87779409-87779428 Msa1223330:intron 35.0%
! TGCTTTCTAGTAAGGATGAT+GGG + chr8_1:87779410-87779429 Msa1223330:intron 35.0%
TAACTCATTGGCACATTGTT+AGG + chr8_1:87779726-87779745 Msa1223330:intron 35.0%
! AGGATAGCATTCTGAAAACT+TGG - chr8_1:87779757-87779776 None:intergenic 35.0%
GATCTTTAACATGAGTGGAT+AGG + chr8_1:87779789-87779808 Msa1223330:intron 35.0%
TCAATTCGACCTACTGAATA+TGG - chr8_1:87779997-87780016 None:intergenic 35.0%
ATTATCGACCATGAAAGCAA+AGG - chr8_1:87780129-87780148 None:intergenic 35.0%
AGGAAAAGTTTACCGTGATA+TGG + chr8_1:87780178-87780197 Msa1223330:intron 35.0%
AAAGTTTACCGTGATATGGT+AGG + chr8_1:87780182-87780201 Msa1223330:CDS 35.0%
ACTTCGTCGTAATTATGGAA+AGG + chr8_1:87780232-87780251 Msa1223330:CDS 35.0%
GTAGAAGTGATTCTCTTCTT+TGG - chr8_1:87780549-87780568 None:intergenic 35.0%
!! CTAGACTACTGGTTCTATTA+TGG + chr8_1:87780583-87780602 Msa1223330:intron 35.0%
! TGCACTATCAATCGGTTTAT+CGG - chr8_1:87780952-87780971 None:intergenic 35.0%
GATAGAACTGCACTATCAAT+CGG - chr8_1:87780960-87780979 None:intergenic 35.0%
GTTCAAGAAACTTGCATTGA+AGG + chr8_1:87781010-87781029 Msa1223330:CDS 35.0%
TCTGAATGTGTTAACCTTCA+GGG - chr8_1:87781288-87781307 None:intergenic 35.0%
!! TATGGAAACTGCTGTCATTT+TGG + chr8_1:87781363-87781382 Msa1223330:intron 35.0%
!!! TGTCATTTTGGAAGCTTAGA+TGG + chr8_1:87781375-87781394 Msa1223330:intron 35.0%
ATGAAACTCATAGAACGTTC+AGG - chr8_1:87781439-87781458 None:intergenic 35.0%
! AACTTGGTGGAAATTTCTCT+AGG + chr8_1:87781495-87781514 Msa1223330:intron 35.0%
GTGGAAATTTCTCTAGGTTA+TGG + chr8_1:87781501-87781520 Msa1223330:intron 35.0%
AGAAGAGATTAAAGGTCTCA+AGG + chr8_1:87781540-87781559 Msa1223330:CDS 35.0%
ACTTATGAAGAACTGAAGAC+AGG + chr8_1:87781604-87781623 Msa1223330:CDS 35.0%
GCATTCAACTAGTTATGCTT+TGG - chr8_1:87781709-87781728 None:intergenic 35.0%
AACTCATCTACAATAATGGC+AGG - chr8_1:87782052-87782071 None:intergenic 35.0%
GACGAACTCATCTACAATAA+TGG - chr8_1:87782056-87782075 None:intergenic 35.0%
TCAAGTTTAGTCGAATGTGA+TGG - chr8_1:87782159-87782178 None:intergenic 35.0%
! CTAAACTTGACAGGACATTT+TGG + chr8_1:87782169-87782188 Msa1223330:intron 35.0%
CAATGTGCATGACATAGATA+AGG - chr8_1:87782203-87782222 None:intergenic 35.0%
TATGTCATGCACATTGATAC+TGG + chr8_1:87782207-87782226 Msa1223330:intron 35.0%
CTTTATGAATTCCTAACCTC+TGG + chr8_1:87782351-87782370 Msa1223330:intron 35.0%
TAAATATTCCTAAGTGCCAG+AGG - chr8_1:87782370-87782389 None:intergenic 35.0%
CATTTGCTTCTGTAAATTCC+CGG + chr8_1:87782473-87782492 Msa1223330:intron 35.0%
! AAAGGAAATCATTTCTGAGG+TGG + chr8_1:87782566-87782585 Msa1223330:CDS 35.0%
GGATGGGAGAATAAATTATG+AGG + chr8_1:87782677-87782696 Msa1223330:intron 35.0%
! GGATTTAAAATAATGGTCCC+TGG - chr8_1:87782737-87782756 None:intergenic 35.0%
!! AGAAGTGTCTTGCATATTCT+GGG - chr8_1:87782843-87782862 None:intergenic 35.0%
!! AAGAAGTGTCTTGCATATTC+TGG - chr8_1:87782844-87782863 None:intergenic 35.0%
ATATGCAAGACACTTCTTCA+TGG + chr8_1:87782846-87782865 Msa1223330:three_prime_UTR 35.0%
!! ATGGATTGGTGAATACTTTG+AGG + chr8_1:87782865-87782884 Msa1223330:three_prime_UTR 35.0%
ACAACCTTGCTACGAAAATT+GGG - chr8_1:87782902-87782921 None:intergenic 35.0%
AACAACCTTGCTACGAAAAT+TGG - chr8_1:87782903-87782922 None:intergenic 35.0%
!!! TATTTTTAGTACCACACGCA+CGG - chr8_1:87782927-87782946 None:intergenic 35.0%
! CAGTGTTATGCTCTTATTTG+TGG + chr8_1:87783047-87783066 Msa1223330:three_prime_UTR 35.0%
! TATGCTCTTATTTGTGGTAG+AGG + chr8_1:87783053-87783072 Msa1223330:three_prime_UTR 35.0%
GGTAGAGGAAAGAATAATCA+CGG + chr8_1:87783068-87783087 Msa1223330:three_prime_UTR 35.0%
GTAGAGGAAAGAATAATCAC+GGG + chr8_1:87783069-87783088 Msa1223330:three_prime_UTR 35.0%
! GAGTTTTTACTTCCTCATAC+GGG - chr8_1:87783114-87783133 None:intergenic 35.0%
AGGCTCTTGTTAATAGGAAA+AGG - chr8_1:87783214-87783233 None:intergenic 35.0%
AGGTGATGATCTATGATGAC+GGG - chr8_1:87778786-87778805 None:intergenic 40.0%
CAGGTGATGATCTATGATGA+CGG - chr8_1:87778787-87778806 None:intergenic 40.0%
TAATTACTATCTACACCGGC+GGG - chr8_1:87778839-87778858 None:intergenic 40.0%
TTACATCAATGTTCCACCTC+AGG + chr8_1:87778862-87778881 Msa1223330:CDS 40.0%
!!! AGGGTTTTGGATTTGAGGAT+GGG - chr8_1:87778913-87778932 None:intergenic 40.0%
ATTCTCTGTGCATCTTGTGA+TGG + chr8_1:87779231-87779250 Msa1223330:intron 40.0%
! AGCTGCTGCTTCTATTTGTA+GGG + chr8_1:87779315-87779334 Msa1223330:intron 40.0%
! GCTTTCTAGTAAGGATGATG+GGG + chr8_1:87779411-87779430 Msa1223330:intron 40.0%
!!! GCACTTAAGGCTACTGATTT+TGG + chr8_1:87779436-87779455 Msa1223330:intron 40.0%
ACTCAATGTCACCATCCTAA+GGG - chr8_1:87779698-87779717 None:intergenic 40.0%
AACTCAATGTCACCATCCTA+AGG - chr8_1:87779699-87779718 None:intergenic 40.0%
! AGGAATTACATGTTGCTTCC+TGG + chr8_1:87780098-87780117 Msa1223330:CDS 40.0%
ATGAAAGCAAAGGAGATACC+AGG - chr8_1:87780119-87780138 None:intergenic 40.0%
TGGTATCTCCTTTGCTTTCA+TGG + chr8_1:87780118-87780137 Msa1223330:intron 40.0%
! AATTACGACGAAGTACCTCA+GGG - chr8_1:87780226-87780245 None:intergenic 40.0%
! TAATTACGACGAAGTACCTC+AGG - chr8_1:87780227-87780246 None:intergenic 40.0%
! GAGGTACTTCGTCGTAATTA+TGG + chr8_1:87780227-87780246 Msa1223330:CDS 40.0%
! GAAATAGACATTTGGAGTGC+AGG + chr8_1:87780254-87780273 Msa1223330:CDS 40.0%
! TTAGTGGTGTACCACCTTTT+TGG + chr8_1:87780297-87780316 Msa1223330:CDS 40.0%
! TAGTGGTGTACCACCTTTTT+GGG + chr8_1:87780298-87780317 Msa1223330:CDS 40.0%
TTGATCTTACCAGCCCAAAA+AGG - chr8_1:87780314-87780333 None:intergenic 40.0%
TCGACTTTGTTAGTGAACCA+TGG + chr8_1:87780469-87780488 Msa1223330:CDS 40.0%
TTGGCACTTTCGGATATTGA+TGG - chr8_1:87780495-87780514 None:intergenic 40.0%
GACTAGATCTTTGGCACTTT+CGG - chr8_1:87780505-87780524 None:intergenic 40.0%
! AAAGTGCCAAAGATCTAGTC+CGG + chr8_1:87780505-87780524 Msa1223330:CDS 40.0%
GTGATTCTCTTCTTTGGATC+TGG - chr8_1:87780543-87780562 None:intergenic 40.0%
ATCACTTCTACAGAAGTCCT+TGG + chr8_1:87780558-87780577 Msa1223330:CDS 40.0%
TACAATACTTGGGATAGCAG+AGG - chr8_1:87780775-87780794 None:intergenic 40.0%
! ACTATCAATCGGTTTATCGG+AGG - chr8_1:87780949-87780968 None:intergenic 40.0%
CAGACAATGACCGACAAAAA+AGG - chr8_1:87781077-87781096 None:intergenic 40.0%
TCGGTCATTGTCTGTAGAAA+TGG + chr8_1:87781083-87781102 Msa1223330:intron 40.0%
AACTTGAGTGAAAGCAAACG+AGG - chr8_1:87781150-87781169 None:intergenic 40.0%
TTGGTAAAAACATGCCCTGA+AGG + chr8_1:87781271-87781290 Msa1223330:intron 40.0%
GTCTGAATGTGTTAACCTTC+AGG - chr8_1:87781289-87781308 None:intergenic 40.0%
CAAGGCAATGTTTGCAAACA+TGG + chr8_1:87781558-87781577 Msa1223330:CDS 40.0%
AACATGGACACTGATAGTAG+TGG + chr8_1:87781574-87781593 Msa1223330:CDS 40.0%
AATTGGATCAAGACTGTCTG+AGG + chr8_1:87781636-87781655 Msa1223330:CDS 40.0%
! AGGCTGATGTTGATGGAAAT+GGG + chr8_1:87781783-87781802 Msa1223330:intron 40.0%
! TCATATCGGCTACAATGCAT+AGG + chr8_1:87781825-87781844 Msa1223330:CDS 40.0%
CACATTCGACTAAACTTGAC+AGG + chr8_1:87782160-87782179 Msa1223330:intron 40.0%
! TTTTCCTAACCCCTTCACTA+TGG + chr8_1:87782251-87782270 Msa1223330:intron 40.0%
TTTCCTAACCCCTTCACTAT+GGG + chr8_1:87782252-87782271 Msa1223330:intron 40.0%
ATATACTCCCCATAGTGAAG+GGG - chr8_1:87782263-87782282 None:intergenic 40.0%
CATATACTCCCCATAGTGAA+GGG - chr8_1:87782264-87782283 None:intergenic 40.0%
TCATATACTCCCCATAGTGA+AGG - chr8_1:87782265-87782284 None:intergenic 40.0%
CGGGAATTTACAGAAGCAAA+TGG - chr8_1:87782475-87782494 None:intergenic 40.0%
TCTCTAGTAATATGCCTGTC+CGG - chr8_1:87782495-87782514 None:intergenic 40.0%
TTCTGTGCAATGATGAGAAG+TGG + chr8_1:87782702-87782721 Msa1223330:CDS 40.0%
TAAAATAATGGTCCCTGGTG+TGG - chr8_1:87782732-87782751 None:intergenic 40.0%
! ATGAAATCGACTCCATTCAG+TGG - chr8_1:87782758-87782777 None:intergenic 40.0%
CGTTAAGTCTCTCGATCAAT+TGG - chr8_1:87782798-87782817 None:intergenic 40.0%
ATCGAGAGACTTAACGTTGT+TGG + chr8_1:87782802-87782821 Msa1223330:three_prime_UTR 40.0%
CAAGACACTTCTTCATGGAT+TGG + chr8_1:87782851-87782870 Msa1223330:three_prime_UTR 40.0%
! CAATCCCAATTTTCGTAGCA+AGG + chr8_1:87782895-87782914 Msa1223330:three_prime_UTR 40.0%
AAATTCAGGCTCAAGACACT+TGG - chr8_1:87783011-87783030 None:intergenic 40.0%
TGATTTCCTTAACCCGTATG+AGG + chr8_1:87783099-87783118 Msa1223330:three_prime_UTR 40.0%
! TTACTTCCTCATACGGGTTA+AGG - chr8_1:87783108-87783127 None:intergenic 40.0%
GGCTGAGATTATGTATCTTC+AGG + chr8_1:87783273-87783292 Msa1223330:three_prime_UTR 40.0%
ACGGGCAGTAAACTCATCTT+TGG - chr8_1:87778768-87778787 None:intergenic 45.0%
GTTGAAGACTGTTGAACCTG+AGG - chr8_1:87778881-87778900 None:intergenic 45.0%
!!! GGGTTTTGGATTTGAGGATG+GGG - chr8_1:87778912-87778931 None:intergenic 45.0%
!!! GAGGGTTTTGGATTTGAGGA+TGG - chr8_1:87778914-87778933 None:intergenic 45.0%
CTAGGTAAAGAATTGGGTCG+AGG + chr8_1:87779022-87779041 Msa1223330:intron 45.0%
AATTGGGTCGAGGCCAATTT+GGG + chr8_1:87779032-87779051 Msa1223330:intron 45.0%
CAGATTCTGCAGCATTTGTC+TGG + chr8_1:87779166-87779185 Msa1223330:intron 45.0%
! CTTGTGATGGAACTTTGTGC+TGG + chr8_1:87779244-87779263 Msa1223330:intron 45.0%
! GAGCTGCTGCTTCTATTTGT+AGG + chr8_1:87779314-87779333 Msa1223330:intron 45.0%
AATGGTGAACCTGAACCCTT+AGG + chr8_1:87779680-87779699 Msa1223330:intron 45.0%
CATTGGCACATTGTTAGGCT+AGG + chr8_1:87779731-87779750 Msa1223330:intron 45.0%
! AAGCACTGCCTACCATATCA+CGG - chr8_1:87780193-87780212 None:intergenic 45.0%
! ATTACGACGAAGTACCTCAG+GGG - chr8_1:87780225-87780244 None:intergenic 45.0%
ATCTTACCAGCCCAAAAAGG+TGG - chr8_1:87780311-87780330 None:intergenic 45.0%
! CTTTCGGATATTGATGGCCA+TGG - chr8_1:87780489-87780508 None:intergenic 45.0%
! CATCTTCCGGACTAGATCTT+TGG - chr8_1:87780514-87780533 None:intergenic 45.0%
AGTCCTTGGTACTAGACTAC+TGG + chr8_1:87780572-87780591 Msa1223330:intron 45.0%
GAACCAGTAGTCTAGTACCA+AGG - chr8_1:87780578-87780597 None:intergenic 45.0%
! ACTCAAGTTGCCATCTCACT+AGG + chr8_1:87781161-87781180 Msa1223330:intron 45.0%
AAGTTGCCATCTCACTAGGT+GGG + chr8_1:87781165-87781184 Msa1223330:intron 45.0%
! ACTAGGTGGGTTTAGCTACA+TGG + chr8_1:87781178-87781197 Msa1223330:intron 45.0%
TGAAGAACTGAAGACAGGCT+TGG + chr8_1:87781609-87781628 Msa1223330:CDS 45.0%
GGCTGAAGTGAAACAGCTTA+TGG + chr8_1:87781657-87781676 Msa1223330:CDS 45.0%
GTTTCTCAGGCTGATGTTGA+TGG + chr8_1:87781776-87781795 Msa1223330:intron 45.0%
! CAGGCTGATGTTGATGGAAA+TGG + chr8_1:87781782-87781801 Msa1223330:intron 45.0%
!! ACATTGATACTGGCTCACTC+TGG + chr8_1:87782217-87782236 Msa1223330:intron 45.0%
TTCCTAACCCCTTCACTATG+GGG + chr8_1:87782253-87782272 Msa1223330:intron 45.0%
ATTCCTAACCTCTGGCACTT+AGG + chr8_1:87782359-87782378 Msa1223330:intron 45.0%
ATTCCTAAGTGCCAGAGGTT+AGG - chr8_1:87782365-87782384 None:intergenic 45.0%
CTCTAGTAATATGCCTGTCC+GGG - chr8_1:87782494-87782513 None:intergenic 45.0%
TGCCATGACAAAGCATGGAA+TGG + chr8_1:87782527-87782546 Msa1223330:CDS 45.0%
GCCATGACAAAGCATGGAAT+GGG + chr8_1:87782528-87782547 Msa1223330:CDS 45.0%
ACCCATTCCATGCTTTGTCA+TGG - chr8_1:87782532-87782551 None:intergenic 45.0%
GGGTGATGAAGCAACGATAA+AGG + chr8_1:87782548-87782567 Msa1223330:CDS 45.0%
GAGGAAAGAATAATCACGGG+AGG + chr8_1:87783072-87783091 Msa1223330:three_prime_UTR 45.0%
GAAGACTGTTGAACCTGAGG+TGG - chr8_1:87778878-87778897 None:intergenic 50.0%
!!! GGCAGAGGGTTTTGGATTTG+AGG - chr8_1:87778918-87778937 None:intergenic 50.0%
!! CTTCTGCTGCACTGGTTTGT+GGG - chr8_1:87778948-87778967 None:intergenic 50.0%
GTATCAACCTTCTGCTGCAC+TGG - chr8_1:87778956-87778975 None:intergenic 50.0%
GAATTGGGTCGAGGCCAATT+TGG + chr8_1:87779031-87779050 Msa1223330:intron 50.0%
GAGGAAGCTTGTGTCGAAAG+CGG + chr8_1:87779117-87779136 Msa1223330:intron 50.0%
! GTGATGGAACTTTGTGCTGG+TGG + chr8_1:87779247-87779266 Msa1223330:intron 50.0%
! CTGGTGGTGAGTTGTTTGAC+AGG + chr8_1:87779263-87779282 Msa1223330:intron 50.0%
GTGAACCTGAACCCTTAGGA+TGG + chr8_1:87779684-87779703 Msa1223330:intron 50.0%
TGTCACCATCCTAAGGGTTC+AGG - chr8_1:87779692-87779711 None:intergenic 50.0%
GGCTCGTGATGATTAGAGTG+TGG - chr8_1:87779835-87779854 None:intergenic 50.0%
TGCTTACTATGTTGCCCCTG+AGG + chr8_1:87780208-87780227 Msa1223330:CDS 50.0%
! GATCTGGTGTCAGCATCTTC+CGG - chr8_1:87780527-87780546 None:intergenic 50.0%
TTGTTTGGCAAGAACACCCG+TGG + chr8_1:87780904-87780923 Msa1223330:intron 50.0%
TCTCCACCTTCTCTCATCCA+CGG - chr8_1:87780924-87780943 None:intergenic 50.0%
CAAGTTGCCATCTCACTAGG+TGG + chr8_1:87781164-87781183 Msa1223330:intron 50.0%
GCTAAACCCACCTAGTGAGA+TGG - chr8_1:87781174-87781193 None:intergenic 50.0%
! AAGACAGGCTTGGCTCGAAT+TGG + chr8_1:87781619-87781638 Msa1223330:CDS 50.0%
TGCATAGGCACAGACTTGAG+CGG + chr8_1:87781840-87781859 Msa1223330:CDS 50.0%
!!! GACAGGACATTTTGGCTCGA+TGG + chr8_1:87782177-87782196 Msa1223330:intron 50.0%
GCTTCTGTAAATTCCCGGAC+AGG + chr8_1:87782478-87782497 Msa1223330:intron 50.0%
GAGACTGCCATGACAAAGCA+TGG + chr8_1:87782522-87782541 Msa1223330:CDS 50.0%
AGAAGTGGAATGCCACACCA+GGG + chr8_1:87782717-87782736 Msa1223330:CDS 50.0%
!! CCTTCTGCTGCACTGGTTTG+TGG - chr8_1:87778949-87778968 None:intergenic 55.0%
CCACAAACCAGTGCAGCAGA+AGG + chr8_1:87778946-87778965 Msa1223330:intron 55.0%
!! GGATGATGGGGCAGCACTTA+AGG + chr8_1:87779423-87779442 Msa1223330:intron 55.0%
!! GGTGTACCACCTTTTTGGGC+TGG + chr8_1:87780302-87780321 Msa1223330:CDS 55.0%
GAACACCCGTGGATGAGAGA+AGG + chr8_1:87780915-87780934 Msa1223330:intron 55.0%
CTCCACCTTCTCTCATCCAC+GGG - chr8_1:87780923-87780942 None:intergenic 55.0%
GCATAGGCACAGACTTGAGC+GGG + chr8_1:87781841-87781860 Msa1223330:CDS 55.0%
CTCCCCATAGTGAAGGGGTT+AGG - chr8_1:87782258-87782277 None:intergenic 55.0%
GAGAAGTGGAATGCCACACC+AGG + chr8_1:87782716-87782735 Msa1223330:CDS 55.0%
! CAAGGTTGTTTCCGTGCGTG+TGG + chr8_1:87782913-87782932 Msa1223330:three_prime_UTR 55.0%
! GCAGTGGTGGCAGAGGGTTT+TGG - chr8_1:87778926-87778945 None:intergenic 60.0%
TTGTGGGCAGTGGTGGCAGA+GGG - chr8_1:87778932-87778951 None:intergenic 60.0%
TTTGTGGGCAGTGGTGGCAG+AGG - chr8_1:87778933-87778952 None:intergenic 60.0%
!! CACTGGTTTGTGGGCAGTGG+TGG - chr8_1:87778939-87778958 None:intergenic 60.0%
!! CTGCACTGGTTTGTGGGCAG+TGG - chr8_1:87778942-87778961 None:intergenic 60.0%
CACCCGTGGATGAGAGAAGG+TGG + chr8_1:87780918-87780937 Msa1223330:CDS 60.0%
! ACGAGAAGGGGGTGCAGCAG+CGG - chr8_1:87778816-87778835 None:intergenic 65.0%
TACACCGGCGGGACGAGAAG+GGG - chr8_1:87778828-87778847 None:intergenic 65.0%
CTACACCGGCGGGACGAGAA+GGG - chr8_1:87778829-87778848 None:intergenic 65.0%
TCTACACCGGCGGGACGAGA+AGG - chr8_1:87778830-87778849 None:intergenic 65.0%
! AAGGGGGTGCAGCAGCGGGA+CGG - chr8_1:87778811-87778830 None:intergenic 70.0%
! CGAGAAGGGGGTGCAGCAGC+GGG - chr8_1:87778815-87778834 None:intergenic 70.0%
ACACCGGCGGGACGAGAAGG+GGG - chr8_1:87778827-87778846 None:intergenic 70.0%
! AGGGGGTGCAGCAGCGGGAC+GGG - chr8_1:87778810-87778829 None:intergenic 75.0%
GCACCCCCTTCTCGTCCCGC+CGG + chr8_1:87778821-87778840 Msa1223330:CDS 75.0%
! GGTGCAGCAGCGGGACGGGC+AGG - chr8_1:87778806-87778825 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 87778731 87783346 87778731 ID=Msa1223330;Name=Msa1223330
chr8_1 mRNA 87778731 87783346 87778731 ID=Msa1223330-mRNA-1;Parent=Msa1223330;Name=Msa1223330-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.75|0.77|1|0.87|0.88|9|594|354
chr8_1 exon 87778731 87778883 87778731 ID=Msa1223330-mRNA-1:exon:31825;Parent=Msa1223330-mRNA-1
chr8_1 exon 87780092 87780119 87780092 ID=Msa1223330-mRNA-1:exon:31826;Parent=Msa1223330-mRNA-1
chr8_1 exon 87780180 87780323 87780180 ID=Msa1223330-mRNA-1:exon:31827;Parent=Msa1223330-mRNA-1
chr8_1 exon 87780427 87780579 87780427 ID=Msa1223330-mRNA-1:exon:31828;Parent=Msa1223330-mRNA-1
chr8_1 exon 87780916 87781031 87780916 ID=Msa1223330-mRNA-1:exon:31829;Parent=Msa1223330-mRNA-1
chr8_1 exon 87781517 87781684 87781517 ID=Msa1223330-mRNA-1:exon:31830;Parent=Msa1223330-mRNA-1
chr8_1 exon 87781785 87781912 87781785 ID=Msa1223330-mRNA-1:exon:31831;Parent=Msa1223330-mRNA-1
chr8_1 exon 87782500 87782599 87782500 ID=Msa1223330-mRNA-1:exon:31832;Parent=Msa1223330-mRNA-1
chr8_1 exon 87782678 87783346 87782678 ID=Msa1223330-mRNA-1:exon:31833;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87778731 87778883 87778731 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87780092 87780119 87780092 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87780180 87780323 87780180 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87780427 87780579 87780427 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87780916 87781031 87780916 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87781517 87781684 87781517 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87781785 87781912 87781785 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87782500 87782599 87782500 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 CDS 87782678 87782752 87782678 ID=Msa1223330-mRNA-1:cds;Parent=Msa1223330-mRNA-1
chr8_1 three_prime_UTR 87782753 87783346 87782753 ID=Msa1223330-mRNA-1:three_prime_utr;Parent=Msa1223330-mRNA-1
Gene Sequence

>Msa1223330

ATGGGTTGTCACGGCAGCAAGGAGAAGAAACATGCCAAAGATGAGTTTACTGCCCGTCATCATAGATCATCACCTGCCCGTCCCGCTGCTGCACCCCCTTCTCGTCCCGCCGGTGTAGATAGTAATTATCGTTACATCAATGTTCCACCTCAGTTTCAAAGGAATTACATGTTGCTTCCTGGAAAAGTTTACCGTGATATGGTAGGCAGTGCTTACTATGTTGCCCCTGAGGTACTTCGTCGTAATTATGGAAAGGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTGCTTAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCTATATTGGAAGGTGAACTCGACTTTGTTAGTGAACCATGGCCATCAATATCCGAAAGTGCCAAAGATCTAGTCCGGAAGATGCTGACACCAGATCCAAAGAAGAGAATCACTTCTACAGAAGTCCTTGAACACCCGTGGATGAGAGAAGGTGGAGAAGCCTCCGATAAACCGATTGATAGTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATGAACAAGTTCAAGAAACTTGCATTGAAGGTTATGGCTGAAAATTTATCAGAAGAAGAGATTAAAGGTCTCAAGGCAATGTTTGCAAACATGGACACTGATAGTAGTGGCACGATCACTTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGATCAAGACTGTCTGAGGCTGAAGTGAAACAGCTTATGGAAGCTGCTGATGTTGATGGAAATGGGTCGATTGACTATCTTGAATTCATATCGGCTACAATGCATAGGCACAGACTTGAGCGGGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGACAATAGTGGGCATATTACTAGAGAAGAATTGGAGACTGCCATGACAAAGCATGGAATGGGTGATGAAGCAACGATAAAGGAAATCATTTCTGAGGTGGATACAGATAATGATGGGAGAATAAATTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGACCATTATTTTAA
Protein sequence

>Msa1223330

MGCHGSKEKKHAKDEFTARHHRSSPARPAAAPPSRPAGVDSNYRYINVPPQFQRNYMLLPGKVYRDMVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISESAKDLVRKMLTPDPKKRITSTEVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEEIKGLKAMFANMDTDSSGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGPLF*