AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0955340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0955340 MtrunA17_Chr6g0480581 97.863 234 4 1 1 233 1 234 9.28e-174 477
Msa0955340 MtrunA17_Chr3g0125801 59.551 178 65 5 2 177 14 186 3.65e-61 193
Msa0955340 MtrunA17_Chr5g0417621 66.917 133 43 1 2 134 132 263 3.48e-59 192
Msa0955340 MtrunA17_Chr4g0042501 52.874 174 74 2 1 167 102 274 3.67e-59 192
Msa0955340 MtrunA17_Chr7g0254261 73.214 112 30 0 1 112 86 197 1.25e-56 184
Msa0955340 MtrunA17_Chr6g0460671 70.192 104 31 0 4 107 99 202 7.62e-51 169
Msa0955340 MtrunA17_Chr6g0460661 57.143 112 48 0 3 114 15 126 8.48e-45 147
Msa0955340 MtrunA17_Chr4g0008551 57.000 100 43 0 4 103 38 137 8.53e-39 137
Msa0955340 MtrunA17_Chr6g0454921 54.082 98 45 0 4 101 15 112 1.08e-35 125
Msa0955340 MtrunA17_Chr5g0401731 54.000 100 46 0 4 103 15 114 2.60e-35 127
Msa0955340 MtrunA17_Chr3g0133601 54.000 100 46 0 4 103 37 136 5.60e-34 121
Msa0955340 MtrunA17_Chr4g0053431 53.000 100 47 0 4 103 5 104 7.60e-34 122
Msa0955340 MtrunA17_Chr5g0437321 52.041 98 47 0 4 101 19 116 2.03e-33 122
Msa0955340 MtrunA17_Chr7g0238631 53.000 100 47 0 4 103 113 212 5.15e-32 122
Msa0955340 MtrunA17_Chr3g0139671 47.368 114 57 1 4 117 85 195 3.41e-31 120
Msa0955340 MtrunA17_Chr1g0157731 46.491 114 58 1 4 117 91 201 1.54e-30 119
Msa0955340 MtrunA17_Chr5g0429661 49.515 103 52 0 1 103 119 221 3.44e-29 112
Msa0955340 MtrunA17_Chr2g0309911 46.667 120 54 4 4 121 13 124 1.15e-27 107
Msa0955340 MtrunA17_Chr4g0022901 50.495 101 49 1 4 103 15 115 2.56e-27 105
Msa0955340 MtrunA17_Chr3g0117511 44.800 125 67 1 4 126 183 307 3.41e-27 108
Msa0955340 MtrunA17_Chr5g0435101 38.272 162 80 6 4 161 13 158 3.96e-27 103
Msa0955340 MtrunA17_Chr4g0058991 42.748 131 73 1 1 129 206 336 6.87e-27 107
Msa0955340 MtrunA17_Chr7g0228891 44.628 121 60 3 4 122 14 129 8.62e-27 103
Msa0955340 MtrunA17_Chr1g0203441 46.078 102 52 2 4 103 15 115 1.21e-26 103
Msa0955340 MtrunA17_Chr4g0022931 49.505 101 50 1 4 103 15 115 1.37e-26 103
Msa0955340 MtrunA17_Chr2g0323351 48.039 102 50 2 4 103 14 114 1.38e-26 103
Msa0955340 MtrunA17_Chr4g0055981 44.554 101 55 1 4 103 57 157 1.44e-26 102
Msa0955340 MtrunA17_Chr8g0342521 44.094 127 61 4 4 128 14 132 1.67e-26 104
Msa0955340 MtrunA17_Chr1g0187761 50.000 102 48 2 4 103 14 114 2.47e-26 102
Msa0955340 MtrunA17_Chr5g0397231 52.632 95 44 1 4 97 14 108 2.48e-26 104
Msa0955340 MtrunA17_Chr2g0311221 50.515 97 47 1 4 99 16 112 2.48e-26 103
Msa0955340 MtrunA17_Chr5g0397841 52.174 92 44 0 7 98 113 204 2.51e-26 105
Msa0955340 MtrunA17_Chr3g0115821 41.429 140 63 5 4 141 14 136 2.71e-26 104
Msa0955340 MtrunA17_Chr8g0342541 48.039 102 50 2 4 103 14 114 3.68e-26 103
Msa0955340 MtrunA17_Chr2g0330041 49.020 102 49 2 4 103 14 114 5.75e-26 104
Msa0955340 MtrunA17_Chr7g0274581 31.414 191 114 4 4 185 14 196 6.74e-26 100
Msa0955340 MtrunA17_Chr4g0022911 48.515 101 51 1 4 103 15 115 7.39e-26 102
Msa0955340 MtrunA17_Chr1g0203411 46.667 105 54 2 4 106 14 118 8.53e-26 102
Msa0955340 MtrunA17_Chr3g0103281 45.545 101 54 1 4 103 14 114 8.93e-26 102
Msa0955340 MtrunA17_Chr8g0360111 46.154 104 47 2 4 102 27 126 9.21e-26 101
Msa0955340 MtrunA17_Chr8g0387421 46.667 105 55 1 4 107 14 118 9.35e-26 102
Msa0955340 MtrunA17_Chr7g0228531 44.167 120 63 2 4 123 220 335 2.14e-25 102
Msa0955340 MtrunA17_Chr5g0410961 44.954 109 56 2 4 111 14 119 2.43e-25 101
Msa0955340 MtrunA17_Chr6g0452271 42.500 120 64 3 4 122 14 129 3.06e-25 101
Msa0955340 MtrunA17_Chr8g0342481 48.544 103 49 3 4 103 14 115 3.43e-25 102
Msa0955340 MtrunA17_Chr7g0270891 43.396 106 59 1 4 108 14 119 3.46e-25 101
Msa0955340 MtrunA17_Chr1g0167691 47.525 101 52 1 4 103 14 114 4.70e-25 99.4
Msa0955340 MtrunA17_Chr4g0058631 43.564 101 56 1 4 103 14 114 6.30e-25 100
Msa0955340 MtrunA17_Chr2g0281071 42.735 117 62 2 4 119 15 127 8.28e-25 100
Msa0955340 MtrunA17_Chr3g0131121 41.085 129 66 4 4 130 14 134 8.29e-25 99.4
Msa0955340 MtrunA17_Chr4g0048511 42.975 121 64 2 4 123 15 131 9.12e-25 100
Msa0955340 MtrunA17_Chr6g0470971 42.157 102 56 2 4 103 16 116 1.01e-24 99.0
Msa0955340 MtrunA17_Chr1g0193801 41.379 116 66 2 4 117 14 129 1.12e-24 100
Msa0955340 MtrunA17_Chr8g0349261 44.355 124 61 4 4 124 15 133 1.18e-24 99.0
Msa0955340 MtrunA17_Chr5g0395281 46.078 102 52 2 4 103 14 114 1.26e-24 99.0
Msa0955340 MtrunA17_Chr1g0211161 44.118 102 54 2 4 103 15 115 1.59e-24 97.1
Msa0955340 MtrunA17_Chr3g0117091 45.098 102 53 2 4 103 14 114 1.63e-24 99.4
Msa0955340 MtrunA17_Chr7g0261281 46.535 101 53 1 4 103 14 114 1.99e-24 98.2
Msa0955340 MtrunA17_Chr3g0099131 41.441 111 64 1 4 113 43 153 2.13e-24 100
Msa0955340 MtrunA17_Chr4g0039971 46.078 102 52 2 4 103 15 115 2.28e-24 99.4
Msa0955340 MtrunA17_Chr8g0334881 47.619 105 53 2 4 106 12 116 2.84e-24 98.2
Msa0955340 MtrunA17_Chr1g0193371 43.396 106 57 2 4 107 14 118 3.41e-24 99.0
Msa0955340 MtrunA17_Chr3g0088461 47.525 101 52 1 4 103 24 124 3.89e-24 98.6
Msa0955340 MtrunA17_Chr1g0194951 41.441 111 58 2 4 113 14 118 5.55e-24 98.2
Msa0955340 MtrunA17_Chr7g0271241 47.423 97 48 2 4 98 14 109 5.70e-24 98.6
Msa0955340 MtrunA17_Chr4g0032401 45.545 101 54 1 4 103 19 119 6.32e-24 97.8
Msa0955340 MtrunA17_Chr8g0354661 41.593 113 65 1 1 112 36 148 6.32e-24 99.4
Msa0955340 MtrunA17_Chr6g0453211 46.392 97 51 1 4 99 14 110 6.43e-24 97.4
Msa0955340 MtrunA17_Chr3g0080861 43.636 110 61 1 4 112 39 148 8.01e-24 99.0
Msa0955340 MtrunA17_Chr2g0323411 42.857 119 65 3 4 119 14 132 8.41e-24 97.1
Msa0955340 MtrunA17_Chr2g0328771 40.336 119 70 1 4 121 22 140 8.61e-24 97.1
Msa0955340 MtrunA17_Chr1g0192411 37.121 132 75 3 4 134 14 138 8.72e-24 98.2
Msa0955340 MtrunA17_Chr7g0217221 44.554 101 55 1 4 103 14 114 8.78e-24 96.3
Msa0955340 MtrunA17_Chr4g0022881 40.385 104 61 1 4 106 14 117 9.05e-24 95.1
Msa0955340 MtrunA17_Chr8g0343831 41.748 103 59 1 2 103 8 110 9.42e-24 95.9
Msa0955340 MtrunA17_Chr8g0385321 40.650 123 62 4 4 122 14 129 1.04e-23 96.7
Msa0955340 MtrunA17_Chr5g0434571 38.095 147 82 4 4 146 50 191 1.10e-23 97.4
Msa0955340 MtrunA17_Chr4g0037141 44.118 102 54 2 4 103 14 114 1.51e-23 95.9
Msa0955340 MtrunA17_Chr5g0434911 36.719 128 75 2 4 125 23 150 1.63e-23 95.5
Msa0955340 MtrunA17_Chr1g0154031 43.636 110 61 1 4 112 78 187 1.84e-23 97.4
Msa0955340 MtrunA17_Chr1g0167661 44.554 101 55 1 4 103 14 114 1.85e-23 94.7
Msa0955340 MtrunA17_Chr4g0068061 42.056 107 58 2 4 109 14 117 2.61e-23 96.3
Msa0955340 MtrunA17_Chr6g0453471 36.691 139 79 3 4 137 14 148 3.02e-23 96.3
Msa0955340 MtrunA17_Chr1g0180391 44.118 102 54 2 4 103 21 121 3.05e-23 94.0
Msa0955340 MtrunA17_Chr5g0417821 44.330 97 53 1 4 99 9 105 3.29e-23 95.1
Msa0955340 MtrunA17_Chr5g0400821 40.179 112 60 3 4 108 14 125 3.50e-23 95.1
Msa0955340 MtrunA17_Chr3g0135311 42.157 102 57 2 4 103 14 115 3.53e-23 95.9
Msa0955340 MtrunA17_Chr8g0346561 40.952 105 60 2 4 106 14 118 3.64e-23 95.1
Msa0955340 MtrunA17_Chr4g0044421 40.769 130 61 4 4 131 14 129 3.84e-23 92.4
Msa0955340 MtrunA17_Chr5g0440781 39.048 105 62 2 4 106 14 118 5.45e-23 92.0
Msa0955340 MtrunA17_Chr4g0022891 40.187 107 61 2 4 108 14 119 5.89e-23 93.2
Msa0955340 MtrunA17_Chr2g0327351 45.455 99 50 3 4 99 14 111 5.92e-23 94.7
Msa0955340 MtrunA17_Chr1g0151941 44.118 102 55 2 4 103 14 115 6.10e-23 93.6
Msa0955340 MtrunA17_Chr6g0450101 33.155 187 92 5 4 173 16 186 9.12e-23 92.0
Msa0955340 MtrunA17_Chr4g0060721 43.564 101 56 1 4 103 15 115 9.39e-23 94.4
Msa0955340 MtrunA17_Chr7g0228401 48.810 84 43 0 15 98 290 373 9.50e-23 95.9
Msa0955340 MtrunA17_Chr7g0275911 41.584 101 58 1 4 103 14 114 1.12e-22 92.8
Msa0955340 MtrunA17_Chr4g0070641 42.157 102 56 2 4 103 14 114 1.22e-22 90.5
Msa0955340 MtrunA17_Chr7g0228481 46.875 96 50 1 4 99 220 314 1.40e-22 95.1
Msa0955340 MtrunA17_Chr4g0070611 42.157 102 56 2 4 103 14 114 1.40e-22 93.6
Msa0955340 MtrunA17_Chr1g0168661 43.590 117 55 3 4 118 23 130 1.42e-22 92.8
Msa0955340 MtrunA17_Chr7g0220341 41.905 105 54 2 4 103 27 129 1.54e-22 92.8
Msa0955340 MtrunA17_Chr5g0440761 39.048 105 62 2 4 106 14 118 1.92e-22 92.4
Msa0955340 MtrunA17_Chr5g0441141 39.048 105 62 2 4 106 14 118 2.14e-22 92.4
Msa0955340 MtrunA17_Chr5g0434931 42.268 97 55 1 4 99 37 133 2.17e-22 92.8
Msa0955340 MtrunA17_Chr1g0152011 41.176 102 58 2 4 103 14 115 2.24e-22 93.6
Msa0955340 MtrunA17_Chr4g0042671 43.119 109 60 2 4 111 14 121 2.26e-22 94.4
Msa0955340 MtrunA17_Chr3g0110351 39.535 129 71 3 4 130 14 137 2.28e-22 93.2
Msa0955340 MtrunA17_Chr5g0441131 40.816 98 56 2 4 99 11 108 2.57e-22 90.1
Msa0955340 MtrunA17_Chr5g0434831 42.268 97 55 1 4 99 9 105 2.66e-22 90.5
Msa0955340 MtrunA17_Chr1g0186061 44.898 98 51 2 4 99 22 118 2.83e-22 91.7
Msa0955340 MtrunA17_Chr1g0209661 41.905 105 60 1 4 107 29 133 3.40e-22 92.8
Msa0955340 MtrunA17_Chr4g0030881 42.017 119 59 2 1 110 6 123 4.81e-22 91.3
Msa0955340 MtrunA17_Chr3g0121241 41.584 101 58 1 4 103 44 144 4.87e-22 92.0
Msa0955340 MtrunA17_Chr7g0228231 42.574 101 57 1 4 103 16 116 5.14e-22 90.1
Msa0955340 MtrunA17_Chr4g0072751 43.878 98 53 2 4 99 14 111 5.34e-22 92.8
Msa0955340 MtrunA17_Chr4g0054391 43.299 97 53 2 4 98 14 110 6.11e-22 91.7
Msa0955340 MtrunA17_Chr7g0228991 42.268 97 55 1 4 99 31 127 6.27e-22 91.3
Msa0955340 MtrunA17_Chr4g0013361 44.762 105 56 2 4 106 12 116 7.30e-22 91.7
Msa0955340 MtrunA17_Chr7g0247131 48.454 97 44 2 30 124 5 97 7.73e-22 90.9
Msa0955340 MtrunA17_Chr3g0092401 40.708 113 63 2 4 115 15 124 9.03e-22 91.7
Msa0955340 MtrunA17_Chr7g0254411 42.574 101 57 1 4 103 14 114 9.18e-22 92.0
Msa0955340 MtrunA17_Chr4g0057031 41.322 121 64 4 4 122 14 129 1.01e-21 90.5
Msa0955340 MtrunA17_Chr4g0028311 41.748 103 56 3 4 103 14 115 1.04e-21 91.7
Msa0955340 MtrunA17_Chr7g0240821 43.434 99 53 2 7 103 6 103 1.31e-21 89.4
Msa0955340 MtrunA17_Chr5g0434841 40.594 101 59 1 4 103 22 122 1.52e-21 90.9
Msa0955340 MtrunA17_Chr7g0264641 41.176 102 58 2 4 103 14 115 1.69e-21 90.1
Msa0955340 MtrunA17_Chr2g0322521 45.946 111 57 2 4 112 31 140 2.35e-21 91.3
Msa0955340 MtrunA17_Chr7g0217741 36.090 133 77 3 4 132 14 142 3.24e-21 90.1
Msa0955340 MtrunA17_Chr1g0194291 43.137 102 55 2 4 103 23 123 5.02e-21 88.6
Msa0955340 MtrunA17_Chr1g0194301 40.566 106 60 2 4 107 35 139 6.25e-21 88.6
Msa0955340 MtrunA17_Chr7g0233061 37.398 123 71 3 4 122 180 300 1.22e-20 89.0
Msa0955340 MtrunA17_Chr2g0327821 43.564 101 56 1 4 103 8 108 1.39e-20 87.0
Msa0955340 MtrunA17_Chr7g0238651 35.714 154 87 5 1 151 4 148 3.14e-20 87.8
Msa0955340 MtrunA17_Chr1g0177901 45.783 83 45 0 15 97 5 87 3.15e-20 85.5
Msa0955340 MtrunA17_Chr4g0068921 40.000 105 62 1 4 107 26 130 3.60e-20 84.7
Msa0955340 MtrunA17_Chr2g0293911 44.211 95 52 1 4 97 26 120 1.59e-18 82.8
Msa0955340 MtrunA17_Chr7g0269831 43.564 101 56 1 4 103 14 114 3.74e-18 82.0
Msa0955340 MtrunA17_Chr5g0416341 35.185 108 68 1 7 114 29 134 8.65e-18 81.6
Msa0955340 MtrunA17_Chr6g0487491 40.179 112 53 4 4 103 14 123 1.00e-17 79.7
Msa0955340 MtrunA17_Chr5g0425591 41.975 81 45 2 4 82 11 91 1.14e-17 75.5
Msa0955340 MtrunA17_Chr5g0434901 53.226 62 29 0 37 98 9 70 1.52e-17 75.9
Msa0955340 MtrunA17_Chr8g0362231 37.234 94 59 0 7 100 25 118 7.85e-17 79.0
Msa0955340 MtrunA17_Chr7g0229101 50.794 63 31 0 37 99 8 70 4.31e-16 74.3
Msa0955340 MtrunA17_Chr3g0093811 37.755 98 55 1 37 128 18 115 5.54e-16 75.1
Msa0955340 MtrunA17_Chr3g0099141 42.500 80 45 1 4 82 42 121 1.01e-15 71.6
Msa0955340 MtrunA17_Chr8g0342531 44.156 77 40 2 4 78 14 89 1.25e-15 72.0
Msa0955340 MtrunA17_Chr8g0342461 45.455 77 40 1 4 78 14 90 6.80e-15 69.3
Msa0955340 MtrunA17_Chr7g0229131 47.619 63 33 0 37 99 8 70 9.00e-15 69.7
Msa0955340 MtrunA17_Chr8g0342511 44.000 75 39 2 4 76 14 87 2.05e-14 67.0
Msa0955340 MtrunA17_Chr8g0342471 44.156 77 41 1 4 78 14 90 2.56e-14 67.8
Msa0955340 MtrunA17_Chr4g0042611 42.667 75 42 1 4 77 14 88 5.96e-14 65.5
Msa0955340 MtrunA17_Chr5g0395221 42.667 75 42 1 4 77 14 88 9.91e-14 64.7
Msa0955340 MtrunA17_Chr2g0323321 38.384 99 58 2 4 100 13 110 2.36e-13 64.3
Msa0955340 MtrunA17_Chr6g0483051 32.609 92 61 1 6 97 71 161 2.45e-13 68.9
Msa0955340 MtrunA17_Chr6g0483051 34.021 97 63 1 4 100 120 215 6.01e-11 61.6
Msa0955340 MtrunA17_Chr6g0453751 37.079 89 46 3 4 82 22 110 5.65e-13 63.9
Msa0955340 MtrunA17_Chr7g0274481 36.585 82 52 0 1 82 4 85 1.08e-11 63.9
Msa0955340 MtrunA17_Chr3g0104501 52.941 51 24 0 4 54 133 183 5.99e-11 60.1
Msa0955340 MtrunA17_Chr7g0233151 46.000 50 27 0 54 103 1 50 7.77e-11 58.9
Msa0955340 MtrunA17_Chr3g0104491 50.000 50 25 0 54 103 17 66 8.60e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0955340 AT1G17950.1 55.556 243 95 6 1 232 2 242 2.65e-80 241
Msa0955340 AT1G73410.1 50.000 254 91 5 1 233 3 241 9.80e-71 216
Msa0955340 AT4G33450.1 46.186 236 116 5 2 231 17 247 7.59e-62 194
Msa0955340 AT1G73410.2 82.727 110 19 0 1 110 3 112 1.19e-61 192
Msa0955340 AT1G69560.1 65.942 138 44 2 3 137 106 243 1.38e-58 188
Msa0955340 AT1G69560.2 65.942 138 44 2 3 137 122 259 1.40e-58 189
Msa0955340 AT1G26780.1 68.254 126 34 1 1 120 95 220 4.79e-57 183
Msa0955340 AT1G26780.2 68.254 126 34 1 1 120 95 220 2.01e-56 184
Msa0955340 AT5G17800.1 72.897 107 29 0 1 107 90 196 4.21e-55 179
Msa0955340 AT3G29020.1 65.789 114 39 0 1 114 62 175 1.44e-53 172
Msa0955340 AT3G29020.2 65.789 114 39 0 1 114 64 177 6.55e-53 173
Msa0955340 AT5G39700.1 56.731 104 45 0 5 108 57 160 1.83e-38 132
Msa0955340 AT2G39880.1 52.778 108 51 0 4 111 50 157 2.15e-37 134
Msa0955340 AT3G50060.1 56.000 100 44 0 4 103 6 105 1.42e-36 130
Msa0955340 AT3G09230.1 53.448 116 52 1 4 117 55 170 3.37e-36 132
Msa0955340 AT3G55730.1 44.697 132 70 1 4 135 56 184 3.81e-36 132
Msa0955340 AT5G67300.1 56.000 100 44 0 4 103 6 105 1.19e-35 128
Msa0955340 AT3G09370.2 51.327 113 54 1 4 116 135 246 3.50e-33 125
Msa0955340 AT3G09370.3 51.327 113 54 1 4 116 143 254 3.87e-33 125
Msa0955340 AT3G09370.1 51.327 113 54 1 4 116 130 241 3.92e-33 125
Msa0955340 AT2G23290.1 52.000 100 48 0 4 103 13 112 4.64e-33 122
Msa0955340 AT4G37260.1 51.000 100 49 0 4 103 13 112 2.34e-32 120
Msa0955340 AT5G11510.2 39.716 141 80 2 4 142 81 218 6.33e-32 123
Msa0955340 AT5G11510.3 39.716 141 80 2 4 142 81 218 6.60e-32 123
Msa0955340 AT5G11510.1 39.716 141 80 2 4 142 81 218 6.60e-32 123
Msa0955340 AT5G11510.4 39.716 141 80 2 4 142 81 218 6.60e-32 123
Msa0955340 AT5G11510.5 39.716 141 80 2 4 142 81 218 7.20e-32 123
Msa0955340 AT5G02320.3 52.000 100 48 0 4 103 67 166 1.36e-31 120
Msa0955340 AT5G02320.1 52.000 100 48 0 4 103 127 226 1.54e-31 121
Msa0955340 AT5G02320.2 52.000 100 48 0 4 103 127 226 1.54e-31 121
Msa0955340 AT4G32730.5 45.690 116 60 1 4 119 87 199 1.99e-31 122
Msa0955340 AT4G32730.4 45.690 116 60 1 4 119 87 199 1.99e-31 122
Msa0955340 AT4G32730.3 45.690 116 60 1 4 119 87 199 1.99e-31 122
Msa0955340 AT4G32730.2 45.690 116 60 1 4 119 87 199 1.99e-31 122
Msa0955340 AT4G32730.1 45.690 116 60 1 4 119 87 199 2.10e-31 121
Msa0955340 AT5G40360.1 46.364 110 59 0 1 110 155 264 4.97e-30 114
Msa0955340 AT1G18570.1 41.007 139 72 4 4 138 15 147 2.20e-28 110
Msa0955340 AT3G12720.1 47.500 120 53 4 4 121 24 135 3.82e-28 108
Msa0955340 AT5G54230.1 49.485 97 48 1 4 99 14 110 4.08e-28 108
Msa0955340 AT3G27785.1 48.598 107 55 0 4 110 189 295 4.33e-28 110
Msa0955340 AT5G14750.1 46.535 101 53 1 4 103 18 118 8.22e-28 105
Msa0955340 AT3G23250.1 48.148 108 54 2 4 110 14 120 1.05e-27 107
Msa0955340 AT5G40330.1 46.535 101 53 1 4 103 14 114 1.23e-27 105
Msa0955340 AT4G26930.1 35.484 186 95 6 4 182 21 188 1.24e-27 108
Msa0955340 AT1G74080.1 36.646 161 87 5 4 157 14 166 6.37e-27 106
Msa0955340 AT2G26960.1 44.144 111 61 1 3 112 21 131 9.14e-27 107
Msa0955340 AT2G25230.1 42.308 104 58 2 6 108 28 130 1.11e-26 103
Msa0955340 AT4G25560.1 48.039 102 50 2 4 103 12 112 1.44e-26 104
Msa0955340 AT3G27920.1 45.545 101 54 1 4 103 16 116 2.20e-26 102
Msa0955340 AT3G13890.2 51.579 95 45 1 4 97 14 108 3.95e-26 104
Msa0955340 AT5G58850.1 46.667 105 56 0 4 108 105 209 4.08e-26 105
Msa0955340 AT1G63910.1 45.536 112 60 1 4 114 14 125 4.91e-26 104
Msa0955340 AT3G11440.2 41.818 110 63 1 4 112 43 152 9.60e-26 104
Msa0955340 AT4G28110.1 48.454 97 49 1 4 99 14 110 1.01e-25 102
Msa0955340 AT5G55020.1 42.478 113 64 1 1 112 25 137 1.21e-25 104
Msa0955340 AT5G65230.1 46.078 102 52 2 4 103 14 114 1.28e-25 102
Msa0955340 AT3G48920.1 47.917 96 49 1 4 98 20 115 1.34e-25 101
Msa0955340 AT1G79180.1 46.535 101 53 1 4 103 16 116 1.68e-25 101
Msa0955340 AT3G11440.3 41.818 110 63 1 4 112 43 152 1.72e-25 104
Msa0955340 AT3G11440.4 41.818 110 63 1 4 112 43 152 1.72e-25 104
Msa0955340 AT3G11440.1 41.818 110 63 1 4 112 43 152 1.72e-25 104
Msa0955340 AT4G05100.1 44.444 117 60 3 4 119 15 127 1.76e-25 102
Msa0955340 AT4G18770.1 48.000 100 52 0 4 103 217 316 1.96e-25 103
Msa0955340 AT5G06100.1 42.727 110 62 1 4 112 34 143 2.09e-25 103
Msa0955340 AT5G06100.5 42.727 110 62 1 4 112 34 143 3.06e-25 103
Msa0955340 AT5G06100.2 42.727 110 62 1 4 112 34 143 3.06e-25 103
Msa0955340 AT5G06100.3 42.727 110 62 1 4 112 34 143 3.06e-25 103
Msa0955340 AT5G06100.4 42.727 110 62 1 4 112 34 143 3.06e-25 103
Msa0955340 AT5G62470.1 39.552 134 77 2 4 136 14 144 3.08e-25 102
Msa0955340 AT2G32460.1 45.045 111 58 2 4 112 20 129 3.80e-25 103
Msa0955340 AT5G11050.1 44.762 105 58 0 4 108 105 209 4.05e-25 102
Msa0955340 AT2G32460.2 45.045 111 58 2 4 112 8 117 4.29e-25 102
Msa0955340 AT2G31180.1 47.525 101 52 1 4 103 14 114 4.81e-25 99.4
Msa0955340 AT4G01680.3 43.396 106 59 1 4 108 14 119 5.15e-25 99.0
Msa0955340 AT3G53200.1 46.939 98 49 2 4 99 11 107 5.37e-25 99.0
Msa0955340 AT5G52600.1 47.959 98 48 2 4 99 14 110 5.48e-25 98.2
Msa0955340 AT2G26950.1 38.261 115 62 2 3 112 17 127 5.58e-25 101
Msa0955340 AT3G13890.1 48.077 104 44 2 4 97 14 117 6.10e-25 101
Msa0955340 AT3G01140.2 45.545 101 54 1 4 103 14 114 1.05e-24 100
Msa0955340 AT3G30210.1 46.392 97 51 1 2 97 27 123 1.31e-24 99.0
Msa0955340 AT1G57560.1 37.908 153 75 6 4 143 14 159 1.35e-24 99.4
Msa0955340 AT3G01140.1 45.545 101 54 1 4 103 57 157 1.39e-24 100
Msa0955340 AT4G00540.2 45.631 103 53 1 4 103 103 205 1.46e-24 100
Msa0955340 AT1G57560.2 36.620 142 79 4 4 141 14 148 1.53e-24 98.6
Msa0955340 AT3G61250.1 48.039 102 50 2 4 103 14 114 1.56e-24 99.0
Msa0955340 AT4G01680.1 43.396 106 59 1 4 108 14 119 1.57e-24 99.8
Msa0955340 AT5G10280.1 45.098 102 53 2 4 103 14 114 1.57e-24 99.8
Msa0955340 AT3G13540.1 35.252 139 88 2 4 140 25 163 1.74e-24 97.8
Msa0955340 AT3G02940.2 47.423 97 50 1 4 99 14 110 1.79e-24 99.0
Msa0955340 AT5G23000.1 46.602 103 51 3 4 103 14 115 1.80e-24 99.4
Msa0955340 AT5G61420.2 35.714 154 92 3 4 154 14 163 2.02e-24 99.8
Msa0955340 AT4G38620.1 34.463 177 88 7 4 159 14 183 2.07e-24 98.6
Msa0955340 AT2G16720.1 38.000 150 79 5 4 146 14 156 2.15e-24 98.2
Msa0955340 AT3G02940.1 47.423 97 50 1 4 99 14 110 2.60e-24 99.0
Msa0955340 AT3G02940.3 47.423 97 50 1 4 99 14 110 2.60e-24 99.0
Msa0955340 AT1G74430.1 44.554 101 55 1 4 103 14 114 2.68e-24 97.8
Msa0955340 AT5G60890.1 40.152 132 70 4 4 133 14 138 2.93e-24 98.2
Msa0955340 AT4G00540.1 45.631 103 53 1 4 103 101 203 3.24e-24 100
Msa0955340 AT5G07690.1 44.118 102 56 1 4 104 14 115 3.71e-24 98.6
Msa0955340 AT5G07700.1 41.935 124 67 2 4 126 14 133 3.89e-24 98.6
Msa0955340 AT5G07700.2 41.935 124 67 2 4 126 14 133 3.89e-24 98.6
Msa0955340 AT5G15310.4 44.554 101 55 1 4 103 14 114 3.96e-24 97.1
Msa0955340 AT5G56110.1 45.545 101 54 1 4 103 14 114 4.06e-24 98.2
Msa0955340 AT5G12870.1 45.545 101 54 1 4 103 20 120 4.26e-24 97.4
Msa0955340 AT1G35515.1 36.800 125 70 3 4 125 14 132 4.28e-24 95.9
Msa0955340 AT5G62470.2 40.441 136 74 4 4 136 14 145 4.48e-24 98.6
Msa0955340 AT1G22640.1 37.143 140 73 4 4 135 14 146 4.96e-24 97.1
Msa0955340 AT2G47460.1 30.144 209 135 4 4 201 14 222 5.38e-24 99.0
Msa0955340 AT5G15310.1 44.554 101 55 1 4 103 14 114 6.41e-24 97.8
Msa0955340 AT4G17785.2 45.098 102 53 2 4 103 15 115 7.10e-24 98.2
Msa0955340 AT5G15310.2 44.554 101 55 1 4 103 14 114 7.14e-24 97.4
Msa0955340 AT5G16770.4 41.026 117 64 2 4 119 14 126 7.76e-24 97.8
Msa0955340 AT5G16770.3 41.026 117 64 2 4 119 14 126 7.76e-24 97.8
Msa0955340 AT3G12820.1 46.078 102 52 2 4 103 16 116 8.36e-24 95.9
Msa0955340 AT4G17785.1 45.098 102 53 2 4 103 15 115 8.89e-24 98.2
Msa0955340 AT5G14340.1 47.059 102 51 2 4 103 26 126 9.14e-24 96.7
Msa0955340 AT3G49690.1 41.071 112 62 3 4 111 14 125 1.04e-23 97.1
Msa0955340 AT5G16770.1 41.026 117 64 2 4 119 14 126 1.12e-23 97.4
Msa0955340 AT5G16770.2 41.026 117 64 2 4 119 14 126 1.12e-23 97.4
Msa0955340 AT5G57620.1 41.284 109 62 2 4 110 14 122 1.15e-23 97.4
Msa0955340 AT5G26660.1 41.880 117 64 3 4 117 14 129 1.55e-23 97.4
Msa0955340 AT4G21440.1 34.810 158 95 4 4 153 14 171 1.61e-23 97.1
Msa0955340 AT5G35550.1 43.478 115 59 3 4 116 16 126 2.08e-23 95.1
Msa0955340 AT1G09540.1 42.991 107 58 2 4 108 14 119 2.10e-23 97.1
Msa0955340 AT5G49330.1 42.342 111 57 2 4 113 14 118 2.21e-23 96.7
Msa0955340 AT3G28470.1 47.423 97 50 1 4 99 14 110 2.32e-23 96.3
Msa0955340 AT1G18710.1 38.843 121 69 2 4 123 14 130 2.43e-23 95.1
Msa0955340 AT1G06180.1 46.078 102 52 2 4 103 14 114 2.70e-23 94.7
Msa0955340 AT5G52260.1 47.059 102 51 2 4 103 14 114 2.80e-23 95.1
Msa0955340 AT4G01680.2 40.678 118 57 2 4 108 14 131 3.53e-23 96.3
Msa0955340 AT3G28910.1 44.554 101 55 1 4 103 14 114 4.81e-23 95.5
Msa0955340 AT1G74650.1 43.564 101 56 1 4 103 14 114 6.82e-23 95.1
Msa0955340 AT4G34990.1 39.344 122 65 3 4 122 14 129 7.21e-23 94.0
Msa0955340 AT3G60460.1 45.714 105 55 2 4 106 13 117 7.35e-23 94.7
Msa0955340 AT1G34670.1 43.564 101 56 1 4 103 14 114 8.11e-23 95.5
Msa0955340 AT3G08500.1 45.545 101 54 1 4 103 32 132 1.28e-22 94.7
Msa0955340 AT5G16600.1 40.496 121 65 3 4 122 14 129 1.47e-22 94.4
Msa0955340 AT1G56160.1 43.137 102 55 2 4 103 16 116 1.49e-22 93.6
Msa0955340 AT5G65790.1 43.689 103 54 3 4 103 14 115 2.01e-22 94.4
Msa0955340 AT2G36890.1 41.935 124 65 4 4 124 14 133 2.18e-22 93.2
Msa0955340 AT5G14750.3 42.342 111 58 4 35 142 16 123 2.20e-22 90.5
Msa0955340 AT3G01530.1 45.098 102 53 2 4 103 27 127 2.24e-22 91.3
Msa0955340 AT4G09460.1 39.604 101 60 1 4 103 14 114 2.30e-22 92.0
Msa0955340 AT3G47600.1 44.118 102 54 2 4 103 14 114 2.91e-22 93.6
Msa0955340 AT2G36890.2 41.935 124 65 4 4 124 55 174 3.51e-22 93.6
Msa0955340 AT4G12350.1 42.857 105 57 2 1 103 11 114 7.05e-22 91.7
Msa0955340 AT1G16490.1 43.564 101 56 1 4 103 16 116 8.34e-22 91.3
Msa0955340 AT1G66230.1 39.669 121 66 3 4 122 14 129 1.23e-21 90.9
Msa0955340 AT5G40350.1 41.284 109 58 2 4 111 19 122 2.04e-21 89.0
Msa0955340 AT5G40430.1 31.944 144 92 3 2 140 52 194 2.37e-21 89.7
Msa0955340 AT3G62610.1 41.584 101 58 1 4 103 14 114 2.80e-21 90.9
Msa0955340 AT3G27810.1 42.056 107 56 2 4 109 22 123 3.28e-21 88.6
Msa0955340 AT3G24310.1 46.875 96 48 2 4 97 20 114 4.12e-21 89.4
Msa0955340 AT5G59780.3 41.509 106 61 1 4 108 10 115 4.95e-21 88.6
Msa0955340 AT1G08810.1 42.574 101 57 1 4 103 14 114 4.96e-21 89.4
Msa0955340 AT4G13480.1 46.875 96 48 2 4 97 8 102 5.06e-21 89.0
Msa0955340 AT3G46130.1 42.453 106 60 1 4 108 11 116 5.28e-21 89.0
Msa0955340 AT1G79180.2 36.296 135 50 2 4 103 16 149 5.90e-21 89.7
Msa0955340 AT1G48000.1 44.211 95 52 1 4 97 34 128 7.53e-21 88.2
Msa0955340 AT2G47190.1 42.574 101 57 1 4 103 22 122 1.18e-20 88.2
Msa0955340 AT1G66370.1 39.815 108 60 2 4 108 10 115 1.66e-20 87.4
Msa0955340 AT1G25340.2 39.423 104 59 1 4 107 20 119 2.38e-20 87.4
Msa0955340 AT1G25340.1 39.048 105 63 1 4 107 20 124 2.84e-20 87.4
Msa0955340 AT4G37780.1 38.235 102 61 2 4 103 14 115 2.96e-20 87.8
Msa0955340 AT1G68320.1 41.509 106 59 2 4 107 21 125 3.00e-20 87.4
Msa0955340 AT1G25340.3 39.423 104 59 1 4 107 20 119 3.50e-20 87.4
Msa0955340 AT4G22680.1 38.843 121 67 4 4 122 14 129 1.12e-19 85.5
Msa0955340 AT1G66380.1 41.748 103 55 2 4 103 10 110 1.55e-19 82.0
Msa0955340 AT3G53200.2 53.968 63 29 0 37 99 12 74 2.40e-19 83.2
Msa0955340 AT5G49620.1 45.263 95 51 1 4 97 28 122 4.08e-19 84.7
Msa0955340 AT3G12820.2 52.239 67 32 0 37 103 2 68 9.01e-19 81.3
Msa0955340 AT5G35550.2 48.750 80 38 1 37 116 53 129 1.43e-18 82.4
Msa0955340 AT3G06490.1 42.157 102 56 2 4 103 21 121 1.46e-18 83.2
Msa0955340 AT2G02820.3 37.037 108 66 1 7 114 33 138 1.89e-18 83.2
Msa0955340 AT1G56650.1 39.286 112 67 1 4 114 10 121 2.34e-18 81.6
Msa0955340 AT2G02820.1 37.037 108 66 1 7 114 33 138 3.30e-18 83.2
Msa0955340 AT2G02820.2 37.037 108 66 1 7 114 33 138 4.85e-18 82.8
Msa0955340 AT5G62320.1 42.202 109 53 3 4 103 15 122 5.90e-18 80.5
Msa0955340 AT1G66390.1 40.777 103 56 2 4 103 10 110 1.15e-17 79.7
Msa0955340 AT5G40350.2 48.000 75 34 1 37 111 8 77 1.27e-17 77.8
Msa0955340 AT5G59780.2 48.611 72 37 0 37 108 23 94 1.68e-17 78.6
Msa0955340 AT5G26660.2 45.122 82 44 1 37 117 17 98 1.86e-17 80.1
Msa0955340 AT3G27810.2 49.315 73 32 1 37 109 7 74 2.03e-17 77.4
Msa0955340 AT3G46130.3 48.611 72 37 0 37 108 13 84 2.33e-17 78.2
Msa0955340 AT3G18100.3 37.895 95 59 0 4 98 498 592 2.43e-17 80.9
Msa0955340 AT3G18100.1 37.895 95 59 0 4 98 546 640 2.61e-17 80.9
Msa0955340 AT3G46130.4 48.611 72 37 0 37 108 23 94 2.76e-17 78.2
Msa0955340 AT3G18100.2 37.113 97 61 0 4 100 333 429 3.17e-17 80.5
Msa0955340 AT3G18100.4 38.298 94 58 0 4 97 385 478 3.19e-17 80.5
Msa0955340 AT1G14350.2 38.144 97 60 0 7 103 28 124 4.79e-17 79.7
Msa0955340 AT1G14350.1 38.144 97 60 0 7 103 28 124 4.79e-17 79.7
Msa0955340 AT2G37630.1 33.333 147 85 4 1 144 1 137 2.96e-16 77.0
Msa0955340 AT5G49620.2 39.450 109 51 2 4 97 28 136 1.06e-15 75.1
Msa0955340 AT3G47600.2 49.254 67 34 0 37 103 42 108 1.28e-15 75.1
Msa0955340 AT3G23250.2 50.000 64 31 1 47 110 1 63 1.47e-14 70.9
Msa0955340 AT1G66380.3 47.761 67 35 0 37 103 11 77 1.87e-14 67.8
Msa0955340 AT5G14750.4 47.368 57 30 0 47 103 1 57 2.70e-14 68.2
Msa0955340 AT5G14750.2 47.368 57 30 0 47 103 1 57 2.70e-14 68.2
Msa0955340 AT1G22640.3 35.789 95 49 2 47 135 1 89 4.75e-13 66.2
Msa0955340 AT1G71030.2 40.625 64 38 0 40 103 5 68 6.75e-12 62.8
Msa0955340 AT1G71030.1 40.625 64 38 0 40 103 19 82 7.81e-12 62.8
Msa0955340 AT1G09770.1 36.585 82 52 0 1 82 4 85 1.38e-11 64.3

Find 74 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTCCTATTCTTGAATT+AGG 0.083132 6_3:+59357229 Msa0955340:five_prime_UTR
TTTCCTAAGTTTCACTTTCA+TGG 0.231772 6_3:+59359646 Msa0955340:CDS
GAAAGTGAAACTTAGGAAAT+TGG 0.247892 6_3:-59359642 None:intergenic
GCAACTATGTTAGCAATTTC+CGG 0.282763 6_3:-59361639 None:intergenic
TAATTCCTATTCTTGAATTA+GGG 0.290578 6_3:+59357230 Msa0955340:five_prime_UTR
AATGGATTTCTGTTTATTCT+TGG 0.293651 6_3:-59359322 None:intergenic
ATAACTTCTCATCGAATTCA+TGG 0.315936 6_3:+59359370 Msa0955340:CDS
AACATTGTGGAACAAGAGTT+TGG 0.324759 6_3:-59359670 None:intergenic
ATCGAATTCATGGTAATAGA+TGG 0.326916 6_3:+59359380 Msa0955340:CDS
AAAGCTATGGACCTCATAAT+TGG 0.364887 6_3:+59357377 Msa0955340:CDS
GTTGAGATGGTTCAATCAAT+TGG 0.365948 6_3:+59359297 Msa0955340:CDS
AGACATGGGAAGAGAATATA+TGG 0.367108 6_3:-59357025 None:intergenic
AAGAAAAGTGGAAGATGAAA+AGG 0.387802 6_3:-59357109 None:intergenic
TCTTCTTCTTCCTCCGTGAA+TGG 0.390044 6_3:-59359340 None:intergenic
AAGTTTGTTTGATGATCATT+TGG 0.397165 6_3:-59359541 None:intergenic
CGAAACCCTAATTCAAGAAT+AGG 0.398650 6_3:-59357235 None:intergenic
CATCTGAGGATGAGAAGCTT+AGG 0.415499 6_3:+59357344 Msa0955340:CDS
TCAAGCTCAATTCATACAAA+TGG 0.418278 6_3:-59361682 None:intergenic
TCTTGTTCCACAATGTTTCA+AGG 0.419165 6_3:+59359676 Msa0955340:CDS
GGAAGTCAATCAAGATGTTA+TGG 0.424222 6_3:+59361568 Msa0955340:CDS
TTAGAACAATATCTCGATCT+AGG 0.424727 6_3:+59361709 Msa0955340:three_prime_UTR
TACAGCATTATCAGTCCGTC+CGG 0.437863 6_3:-59359425 None:intergenic
ATAATGCTGTAAAGAATCAT+TGG 0.449918 6_3:+59359437 Msa0955340:CDS
GGACCATGAAAGTGAAACTT+AGG 0.451266 6_3:-59359649 None:intergenic
TGAGAAGCTTAGGGAGTTGG+TGG 0.459888 6_3:+59357354 Msa0955340:CDS
AAACTATAGGTGAAGAGGAT+AGG 0.470701 6_3:+59357196 Msa0955340:five_prime_UTR
GAAAATCTCCGAGGAAGATC+AGG 0.471533 6_3:+59357412 Msa0955340:CDS
GGAAAAGTTGTAGGTTGAGA+TGG 0.483490 6_3:+59359284 Msa0955340:CDS
ACACACATATAATGTATTCA+AGG 0.484874 6_3:+59361769 Msa0955340:three_prime_UTR
GGAGAAAACTATAGGTGAAG+AGG 0.485091 6_3:+59357191 Msa0955340:five_prime_UTR
GGATGAGAAGCTTAGGGAGT+TGG 0.485907 6_3:+59357351 Msa0955340:CDS
ACAAAATTGAAGACAAGAAG+TGG 0.496122 6_3:-59357052 None:intergenic
GCTATGGCGTTCCAATTATG+AGG 0.499293 6_3:-59357388 None:intergenic
AGAAAAGTGGAAGATGAAAA+GGG 0.508852 6_3:-59357108 None:intergenic
AAAGGGATATATATAAGAAA+AGG 0.512562 6_3:-59357091 None:intergenic
TGGCGAGGATTCGTCGAGAA+AGG 0.513383 6_3:+59359470 Msa0955340:CDS
AGCAAGAGGGAGAAAACTAT+AGG 0.521411 6_3:+59357183 Msa0955340:five_prime_UTR
AGGGAGTTGGTGGAAAGCTA+TGG 0.521525 6_3:+59357364 Msa0955340:CDS
CAATATATATCAAAGAAAAG+TGG 0.524444 6_3:-59357121 None:intergenic
GCTCAATTCATACAAATGGT+TGG 0.524472 6_3:-59361678 None:intergenic
AGGTATAAGATCTATGCAAA+AGG 0.527507 6_3:+59359490 Msa0955340:CDS
ATCTGAGGATGAGAAGCTTA+GGG 0.530955 6_3:+59357345 Msa0955340:CDS
CTAAGCTTCTCATCCTCAGA+TGG 0.534492 6_3:-59357343 None:intergenic
ACAGCATTATCAGTCCGTCC+GGG 0.534922 6_3:-59359424 None:intergenic
AAAATTGTGTGATGATCAAG+AGG 0.537064 6_3:-59359514 None:intergenic
CATCCTCAGATGGTCTCCAA+TGG 0.553569 6_3:-59357333 None:intergenic
GAATCATTGGCATGTGATGA+TGG 0.556027 6_3:+59359450 Msa0955340:CDS
AATAAACAGAAATCCATTCA+CGG 0.562387 6_3:+59359327 Msa0955340:CDS
TATATTAATATGTGTAGTAG+AGG 0.574832 6_3:+59357310 Msa0955340:exon
TCGAATTCATGGTAATAGAT+GGG 0.576280 6_3:+59359381 Msa0955340:CDS
ATATGTGTAGTAGAGGCCAT+TGG 0.582916 6_3:+59357317 Msa0955340:exon
GGGAAGAGAATATATGGTGG+GGG 0.588730 6_3:-59357019 None:intergenic
ATGGGAAGAGAATATATGGT+GGG 0.590124 6_3:-59357021 None:intergenic
GTCATTGCAAGACACTTCCC+CGG 0.595561 6_3:+59359406 Msa0955340:CDS
AGATGTACCTTGAAACATTG+TGG 0.598409 6_3:-59359683 None:intergenic
GATACTTCTCAACAAAAGAG+TGG 0.604960 6_3:-59359579 None:intergenic
ATCATATAGATCAAAGCAAG+AGG 0.608293 6_3:+59357169 Msa0955340:five_prime_UTR
ACAAGAAGTGGAAAGAGACA+TGG 0.608601 6_3:-59357040 None:intergenic
TGATCTATATGATCAACTCA+AGG 0.608924 6_3:-59357159 None:intergenic
CAAGAAGTGGAAAGAGACAT+GGG 0.611099 6_3:-59357039 None:intergenic
TTGCAAGACACTTCCCCGGA+CGG 0.616706 6_3:+59359410 Msa0955340:CDS
CAGCATTATCAGTCCGTCCG+GGG 0.621205 6_3:-59359423 None:intergenic
TGTTATGGCACTGAAGAACA+AGG 0.625152 6_3:+59361583 Msa0955340:CDS
AGGCCATTGGAGACCATCTG+AGG 0.626741 6_3:+59357330 Msa0955340:CDS
TAATGCTAGAAGAGATGATG+AGG 0.631566 6_3:+59361547 Msa0955340:CDS
TGGGAAGAGAATATATGGTG+GGG 0.636808 6_3:-59357020 None:intergenic
CATGGGAAGAGAATATATGG+TGG 0.663893 6_3:-59357022 None:intergenic
TCATATAGATCAAAGCAAGA+GGG 0.678055 6_3:+59357170 Msa0955340:five_prime_UTR
ATTGGCATGTGATGATGGCG+AGG 0.687951 6_3:+59359455 Msa0955340:CDS
AAGAGCTATGAGAGACACGA+GGG 0.698198 6_3:-59359618 None:intergenic
AATTCATGGTAATAGATGGG+CGG 0.709335 6_3:+59359384 Msa0955340:CDS
AAAGAGCTATGAGAGACACG+AGG 0.719727 6_3:-59359619 None:intergenic
AAACAGAAATCCATTCACGG+AGG 0.757168 6_3:+59359330 Msa0955340:CDS
GCCATAGCTGAAAATCTCCG+AGG 0.757333 6_3:+59357403 Msa0955340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTTATTAAAAAAAT+TGG - chr6_3:59358331-59358350 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr6_3:59360387-59360406 None:intergenic 0.0%
!! ATAAATAAGAATAATTGATA+TGG - chr6_3:59358036-59358055 None:intergenic 10.0%
!! TTTAATCAATATTATATTTG+GGG + chr6_3:59358410-59358429 Msa0955340:intron 10.0%
!!! AATTGATTAAATATTTTTCT+AGG + chr6_3:59358726-59358745 Msa0955340:intron 10.0%
!!! ATTGATTAAATATTTTTCTA+GGG + chr6_3:59358727-59358746 Msa0955340:intron 10.0%
!! AAATGTAAAAAAAAATTGTA+GGG + chr6_3:59358793-59358812 Msa0955340:intron 10.0%
!!! TTTTTTTACTAATAATCTTA+GGG - chr6_3:59359977-59359996 None:intergenic 10.0%
!!! TTTTTTTTACTAATAATCTT+AGG - chr6_3:59359978-59359997 None:intergenic 10.0%
!!! AATAGAATAATTTTTTAAGA+GGG - chr6_3:59360069-59360088 None:intergenic 10.0%
!!! AAATAGAATAATTTTTTAAG+AGG - chr6_3:59360070-59360089 None:intergenic 10.0%
!! TTTCTATAAAAAAAAATAGT+GGG + chr6_3:59360618-59360637 Msa0955340:intron 10.0%
!!! TTTAAATTTTGGTTTTTTAA+CGG - chr6_3:59360936-59360955 None:intergenic 10.0%
!!! ATTTTATTTCGTTTAAATTT+TGG - chr6_3:59360947-59360966 None:intergenic 10.0%
!! TTAAACGAAATAAAATATTA+TGG + chr6_3:59360951-59360970 Msa0955340:intron 10.0%
!! CAAAATTAATAAATAAGGAT+TGG - chr6_3:59357836-59357855 None:intergenic 15.0%
!! CGTAACAAAATTAATAAATA+AGG - chr6_3:59357841-59357860 None:intergenic 15.0%
!!! AATTTAGATCCAAAATTTTA+TGG - chr6_3:59358185-59358204 None:intergenic 15.0%
!! AAAAAAAGAGGAAAATATTA+GGG - chr6_3:59358250-59358269 None:intergenic 15.0%
!! AAAAAAAAGAGGAAAATATT+AGG - chr6_3:59358251-59358270 None:intergenic 15.0%
!! TAGTTTATTTGATAAATTGT+GGG + chr6_3:59358548-59358567 Msa0955340:intron 15.0%
!! CATATATAATATTTCTCTTT+GGG - chr6_3:59358643-59358662 None:intergenic 15.0%
!! TCTAGTTAATTGATTAAATT+TGG + chr6_3:59358688-59358707 Msa0955340:intron 15.0%
!! CAAATGTAAAAAAAAATTGT+AGG + chr6_3:59358792-59358811 Msa0955340:intron 15.0%
!! AAATAAATGATTTATTGAGA+TGG + chr6_3:59358932-59358951 Msa0955340:intron 15.0%
!! TTATTTAATCCAACATTATA+AGG + chr6_3:59359057-59359076 Msa0955340:intron 15.0%
!! CAAATTAAACTTATAAATCA+AGG - chr6_3:59359218-59359237 None:intergenic 15.0%
!!! ATTTTGTCTTGAATTTTATT+AGG + chr6_3:59359262-59359281 Msa0955340:intron 15.0%
!!! TTTTGTCTTGAATTTTATTA+GGG + chr6_3:59359263-59359282 Msa0955340:intron 15.0%
!!! TGATGTTATAGTATTAATTT+TGG - chr6_3:59359809-59359828 None:intergenic 15.0%
!! AAATTAATACTATAACATCA+AGG + chr6_3:59359809-59359828 Msa0955340:intron 15.0%
!! TAAATTAAAGAAAGTTCAAT+AGG + chr6_3:59359870-59359889 Msa0955340:intron 15.0%
!!! AGTTAATTTTTTTAGTCTTA+GGG - chr6_3:59360009-59360028 None:intergenic 15.0%
!!! AAGTTAATTTTTTTAGTCTT+AGG - chr6_3:59360010-59360029 None:intergenic 15.0%
!! GTTTCTATAAAAAAAAATAG+TGG + chr6_3:59360617-59360636 Msa0955340:intron 15.0%
!!! ATATATATATAGGTTTTACT+AGG - chr6_3:59360649-59360668 None:intergenic 15.0%
!! TCAACAAAAATTAATGTATT+TGG - chr6_3:59360848-59360867 None:intergenic 15.0%
!!! ACAGTTCATTTTTTTTTTTT+TGG - chr6_3:59361016-59361035 None:intergenic 15.0%
!! AAAGGGATATATATAAGAAA+AGG - chr6_3:59357094-59357113 None:intergenic 20.0%
!! CAATATATATCAAAGAAAAG+TGG - chr6_3:59357124-59357143 None:intergenic 20.0%
!! ATAATTCCTATTCTTGAATT+AGG + chr6_3:59357229-59357248 Msa0955340:five_prime_UTR 20.0%
!! TAATTCCTATTCTTGAATTA+GGG + chr6_3:59357230-59357249 Msa0955340:five_prime_UTR 20.0%
!! TATATTAATATGTGTAGTAG+AGG + chr6_3:59357310-59357329 Msa0955340:exon 20.0%
!! TAACTACAAATAACAAATTC+AGG + chr6_3:59357477-59357496 Msa0955340:intron 20.0%
!!! TTTTTTAGATGAAATTTGCT+AGG - chr6_3:59357928-59357947 None:intergenic 20.0%
!! TTTCTTAAAAAAAAAGCAAG+AGG - chr6_3:59357979-59357998 None:intergenic 20.0%
!!! AAATTTAGAGCCAAAATTTT+AGG - chr6_3:59358138-59358157 None:intergenic 20.0%
!!! GTGTTTAGAATAAATAAAGA+GGG - chr6_3:59358460-59358479 None:intergenic 20.0%
!!! TGTGTTTAGAATAAATAAAG+AGG - chr6_3:59358461-59358480 None:intergenic 20.0%
!! GTAGTTTATTTGATAAATTG+TGG + chr6_3:59358547-59358566 Msa0955340:intron 20.0%
!! GCATATATAATATTTCTCTT+TGG - chr6_3:59358644-59358663 None:intergenic 20.0%
!! AATTAACTAGATTATTTACC+CGG - chr6_3:59358679-59358698 None:intergenic 20.0%
!!! ATTTTCTTGTGTGTATATAA+GGG + chr6_3:59359002-59359021 Msa0955340:intron 20.0%
!! ATATAAGAATGATAATTTGG+TGG - chr6_3:59359194-59359213 None:intergenic 20.0%
!! GGAATATAAGAATGATAATT+TGG - chr6_3:59359197-59359216 None:intergenic 20.0%
!! CGTTTATATAATTATCATCA+TGG + chr6_3:59359740-59359759 Msa0955340:intron 20.0%
!! AACTCATTAAATCAATTACA+TGG + chr6_3:59359899-59359918 Msa0955340:intron 20.0%
!!! AGTTGTTACTTTTTTTAGAT+TGG - chr6_3:59359952-59359971 None:intergenic 20.0%
!!! TTAGAAAGTTAGATAAGTTT+TGG - chr6_3:59360126-59360145 None:intergenic 20.0%
!!! AAGCAGATGTTTTTTTTTAA+TGG + chr6_3:59360357-59360376 Msa0955340:intron 20.0%
!!! CATTTTTCAGAGAATATAAT+CGG - chr6_3:59360742-59360761 None:intergenic 20.0%
!! CCTAAAATGTAAGTAAAAAT+TGG - chr6_3:59360871-59360890 None:intergenic 20.0%
!!! CCAATTTTTACTTACATTTT+AGG + chr6_3:59360868-59360887 Msa0955340:intron 20.0%
!!! TTTTTACTTACATTTTAGGA+CGG + chr6_3:59360872-59360891 Msa0955340:intron 20.0%
!!! TTTTTAACGGTACAAATTAT+TGG - chr6_3:59360923-59360942 None:intergenic 20.0%
!!! TCATTTTTTTTTTTTTGGTG+TGG - chr6_3:59361011-59361030 None:intergenic 20.0%
!! AAAAAAAATTAGGTATGAGT+TGG - chr6_3:59361268-59361287 None:intergenic 20.0%
!!! TCATACCTAATTTTTTTTAG+TGG + chr6_3:59361270-59361289 Msa0955340:intron 20.0%
!!! CCACAATTTTTGTAATATAA+TGG - chr6_3:59361838-59361857 None:intergenic 20.0%
!! CCATTATATTACAAAAATTG+TGG + chr6_3:59361835-59361854 Msa0955340:three_prime_UTR 20.0%
!!! TGTTGTGATTTTTTTTAGCT+AGG + chr6_3:59357283-59357302 Msa0955340:five_prime_UTR 25.0%
! GATCATAATTTGAGGAAATT+AGG + chr6_3:59357717-59357736 Msa0955340:intron 25.0%
! TAAAAAAAAAGCAAGAGGAT+AGG - chr6_3:59357974-59357993 None:intergenic 25.0%
!! ACAACTCAATCCTAAAATTT+TGG + chr6_3:59358125-59358144 Msa0955340:intron 25.0%
!! AATCCTCAACCATAAAATTT+TGG + chr6_3:59358173-59358192 Msa0955340:intron 25.0%
!! AAATATTAGGGTTTTTGTTG+AGG - chr6_3:59358238-59358257 None:intergenic 25.0%
! GAAATATTATATATGCAACC+CGG + chr6_3:59358648-59358667 Msa0955340:intron 25.0%
!!! TTTTTTTTTCCACATGCTTT+TGG + chr6_3:59358843-59358862 Msa0955340:intron 25.0%
!! GATTTTCTTGTGTGTATATA+AGG + chr6_3:59359001-59359020 Msa0955340:intron 25.0%
! AAAAGACAACCTTATAATGT+TGG - chr6_3:59359069-59359088 None:intergenic 25.0%
! GTATTGTTAATTTCATGTCT+AGG + chr6_3:59359112-59359131 Msa0955340:intron 25.0%
!! TTTTATTAGGGAAAAGTTGT+AGG + chr6_3:59359275-59359294 Msa0955340:intron 25.0%
!! AATGGATTTCTGTTTATTCT+TGG - chr6_3:59359325-59359344 None:intergenic 25.0%
! AATAAACAGAAATCCATTCA+CGG + chr6_3:59359327-59359346 Msa0955340:CDS 25.0%
! ATAATGCTGTAAAGAATCAT+TGG + chr6_3:59359437-59359456 Msa0955340:CDS 25.0%
!! AAGTTTGTTTGATGATCATT+TGG - chr6_3:59359544-59359563 None:intergenic 25.0%
!! TTTGAAATTGTGATACATCA+TGG + chr6_3:59359763-59359782 Msa0955340:intron 25.0%
!!! TAATTTTTTAAGAGGGTATG+AGG - chr6_3:59360062-59360081 None:intergenic 25.0%
! TTCATTCTCTAATAAATGTG+TGG - chr6_3:59360254-59360273 None:intergenic 25.0%
! ATTTATTAGAGAATGAACGT+GGG + chr6_3:59360257-59360276 Msa0955340:intron 25.0%
! TTTGACTAAAACAAATACGA+AGG + chr6_3:59360305-59360324 Msa0955340:intron 25.0%
!! ACACTCCTTCTAAAAAAATA+AGG + chr6_3:59360503-59360522 Msa0955340:intron 25.0%
!! CACTCCTTCTAAAAAAATAA+GGG + chr6_3:59360504-59360523 Msa0955340:intron 25.0%
!! ACTCCTTCTAAAAAAATAAG+GGG + chr6_3:59360505-59360524 Msa0955340:intron 25.0%
! AAGTTGTTAAATACACCTTA+AGG - chr6_3:59360551-59360570 None:intergenic 25.0%
!!! CCAACTAGTTTTTATTACTA+AGG - chr6_3:59360598-59360617 None:intergenic 25.0%
! CCTTAGTAATAAAAACTAGT+TGG + chr6_3:59360595-59360614 Msa0955340:intron 25.0%
!! GTTGACTAATTTTTGCTTAA+CGG - chr6_3:59360776-59360795 None:intergenic 25.0%
!!! TTTTTGTTTGGTTCTGTTTT+TGG + chr6_3:59361115-59361134 Msa0955340:intron 25.0%
!! ATATAACCTCTAAAAATGTG+CGG - chr6_3:59361218-59361237 None:intergenic 25.0%
! TATATACTATACAAAGTCCA+GGG - chr6_3:59361308-59361327 None:intergenic 25.0%
! ATATATACTATACAAAGTCC+AGG - chr6_3:59361309-59361328 None:intergenic 25.0%
!! TACACACACAAATTTTCTAA+TGG + chr6_3:59361413-59361432 Msa0955340:intron 25.0%
!!! ATCAGTTACTTCACTTTTAT+TGG - chr6_3:59361528-59361547 None:intergenic 25.0%
!!! TTCATTGATTTTTTGTCTAC+CGG + chr6_3:59361620-59361639 Msa0955340:CDS 25.0%
! ACACACATATAATGTATTCA+AGG + chr6_3:59361769-59361788 Msa0955340:three_prime_UTR 25.0%
ACAAAATTGAAGACAAGAAG+TGG - chr6_3:59357055-59357074 None:intergenic 30.0%
AGAAAAGTGGAAGATGAAAA+GGG - chr6_3:59357111-59357130 None:intergenic 30.0%
AAGAAAAGTGGAAGATGAAA+AGG - chr6_3:59357112-59357131 None:intergenic 30.0%
TGATCTATATGATCAACTCA+AGG - chr6_3:59357162-59357181 None:intergenic 30.0%
ATCATATAGATCAAAGCAAG+AGG + chr6_3:59357169-59357188 Msa0955340:five_prime_UTR 30.0%
TCATATAGATCAAAGCAAGA+GGG + chr6_3:59357170-59357189 Msa0955340:five_prime_UTR 30.0%
! TAATTTTACCTGATCTTCCT+CGG - chr6_3:59357423-59357442 None:intergenic 30.0%
TTTCTTGTATACATACTCGA+TGG - chr6_3:59357521-59357540 None:intergenic 30.0%
ATGATAGCATACTTAACTCT+TGG + chr6_3:59357541-59357560 Msa0955340:intron 30.0%
TGATAGCATACTTAACTCTT+GGG + chr6_3:59357542-59357561 Msa0955340:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG - chr6_3:59357892-59357911 None:intergenic 30.0%
TTAGTGGAGGGAAAAAAATT+AGG - chr6_3:59358087-59358106 None:intergenic 30.0%
AGTTGTTGCAAACCTAATAA+GGG - chr6_3:59358111-59358130 None:intergenic 30.0%
! GATCCAAAATTTTATGGTTG+AGG - chr6_3:59358179-59358198 None:intergenic 30.0%
GATGGGTAAAGAAAAAAAAG+AGG - chr6_3:59358262-59358281 None:intergenic 30.0%
! TTGTGGGTTATAATGAGTAA+TGG + chr6_3:59358564-59358583 Msa0955340:intron 30.0%
TGTGTTCAATAAACGTAGAA+GGG - chr6_3:59358910-59358929 None:intergenic 30.0%
ATGTGTTCAATAAACGTAGA+AGG - chr6_3:59358911-59358930 None:intergenic 30.0%
! TTGTGTGTATATAAGGGTTT+TGG + chr6_3:59359008-59359027 Msa0955340:intron 30.0%
TGTTAATTTCATGTCTAGGA+TGG + chr6_3:59359116-59359135 Msa0955340:intron 30.0%
! GTTAATTTCATGTCTAGGAT+GGG + chr6_3:59359117-59359136 Msa0955340:intron 30.0%
! AGAATGATAATTTGGTGGTA+GGG - chr6_3:59359189-59359208 None:intergenic 30.0%
! AAGAATGATAATTTGGTGGT+AGG - chr6_3:59359190-59359209 None:intergenic 30.0%
ATAACTTCTCATCGAATTCA+TGG + chr6_3:59359370-59359389 Msa0955340:CDS 30.0%
ATCGAATTCATGGTAATAGA+TGG + chr6_3:59359380-59359399 Msa0955340:CDS 30.0%
TCGAATTCATGGTAATAGAT+GGG + chr6_3:59359381-59359400 Msa0955340:CDS 30.0%
AGGTATAAGATCTATGCAAA+AGG + chr6_3:59359490-59359509 Msa0955340:CDS 30.0%
AAAATTGTGTGATGATCAAG+AGG - chr6_3:59359517-59359536 None:intergenic 30.0%
GAAAGTGAAACTTAGGAAAT+TGG - chr6_3:59359645-59359664 None:intergenic 30.0%
TTTCCTAAGTTTCACTTTCA+TGG + chr6_3:59359646-59359665 Msa0955340:CDS 30.0%
! TGAATAGTTTAGAGTTGGTT+GGG - chr6_3:59360231-59360250 None:intergenic 30.0%
CATTTATTAGAGAATGAACG+TGG + chr6_3:59360256-59360275 Msa0955340:intron 30.0%
ACACCTTCATAAAAACTAGT+GGG - chr6_3:59360424-59360443 None:intergenic 30.0%
AAGTAGCTAAATACATCCAA+AGG - chr6_3:59360463-59360482 None:intergenic 30.0%
! CTCCTTCTAAAAAAATAAGG+GGG + chr6_3:59360506-59360525 Msa0955340:intron 30.0%
! TTTTAGCAACATTCACCTTA+AGG + chr6_3:59360533-59360552 Msa0955340:intron 30.0%
! ACTAATTTTTGCTTAACGGA+GGG - chr6_3:59360772-59360791 None:intergenic 30.0%
CTAAAAAGTTCGTGAATTGT+CGG + chr6_3:59361073-59361092 Msa0955340:intron 30.0%
!!! ACCTAATTTTTTTTAGTGGC+CGG + chr6_3:59361274-59361293 Msa0955340:intron 30.0%
TCAAGCTCAATTCATACAAA+TGG - chr6_3:59361685-59361704 None:intergenic 30.0%
TTAGAACAATATCTCGATCT+AGG + chr6_3:59361709-59361728 Msa0955340:three_prime_UTR 30.0%
ATGGGAAGAGAATATATGGT+GGG - chr6_3:59357024-59357043 None:intergenic 35.0%
AGACATGGGAAGAGAATATA+TGG - chr6_3:59357028-59357047 None:intergenic 35.0%
AAACTATAGGTGAAGAGGAT+AGG + chr6_3:59357196-59357215 Msa0955340:five_prime_UTR 35.0%
CGAAACCCTAATTCAAGAAT+AGG - chr6_3:59357238-59357257 None:intergenic 35.0%
AAAGCTATGGACCTCATAAT+TGG + chr6_3:59357377-59357396 Msa0955340:CDS 35.0%
CACAGCTAGATCATAATTTG+AGG + chr6_3:59357709-59357728 Msa0955340:intron 35.0%
ACCAATACACAGCTAAAATC+TGG - chr6_3:59357804-59357823 None:intergenic 35.0%
AAATGAGCGGGGAAAAAATT+AGG - chr6_3:59357879-59357898 None:intergenic 35.0%
ACCTAATAAAGCAAATGAGC+GGG - chr6_3:59357891-59357910 None:intergenic 35.0%
CAAGAGGATAGGAATGAAAT+TGG - chr6_3:59357963-59357982 None:intergenic 35.0%
CAAACCTAATAAGGGATTAG+TGG - chr6_3:59358103-59358122 None:intergenic 35.0%
GAGTTGTTGCAAACCTAATA+AGG - chr6_3:59358112-59358131 None:intergenic 35.0%
GAAACTCAAATTGTGTGCAT+GGG - chr6_3:59358886-59358905 None:intergenic 35.0%
AGAAACTCAAATTGTGTGCA+TGG - chr6_3:59358887-59358906 None:intergenic 35.0%
GAAAATCTCTTTCACTATGC+TGG - chr6_3:59358988-59359007 None:intergenic 35.0%
TAAAGACTGTAGTGATAGGA+AGG - chr6_3:59359156-59359175 None:intergenic 35.0%
GAGTTAAAGACTGTAGTGAT+AGG - chr6_3:59359160-59359179 None:intergenic 35.0%
GTTGAGATGGTTCAATCAAT+TGG + chr6_3:59359297-59359316 Msa0955340:CDS 35.0%
AATTCATGGTAATAGATGGG+CGG + chr6_3:59359384-59359403 Msa0955340:CDS 35.0%
GATACTTCTCAACAAAAGAG+TGG - chr6_3:59359582-59359601 None:intergenic 35.0%
AACATTGTGGAACAAGAGTT+TGG - chr6_3:59359673-59359692 None:intergenic 35.0%
TCTTGTTCCACAATGTTTCA+AGG + chr6_3:59359676-59359695 Msa0955340:CDS 35.0%
AGATGTACCTTGAAACATTG+TGG - chr6_3:59359686-59359705 None:intergenic 35.0%
GATGGAATGTATCATAGTAG+TGG - chr6_3:59360204-59360223 None:intergenic 35.0%
! GTGAATAGTTTAGAGTTGGT+TGG - chr6_3:59360232-59360251 None:intergenic 35.0%
! TGTGGTGAATAGTTTAGAGT+TGG - chr6_3:59360236-59360255 None:intergenic 35.0%
!!! TCACCCACTAGTTTTTATGA+AGG + chr6_3:59360418-59360437 Msa0955340:intron 35.0%
CACACCTTCATAAAAACTAG+TGG - chr6_3:59360425-59360444 None:intergenic 35.0%
!!! CACCCCCTTATTTTTTTAGA+AGG - chr6_3:59360511-59360530 None:intergenic 35.0%
! GACTAATTTTTGCTTAACGG+AGG - chr6_3:59360773-59360792 None:intergenic 35.0%
!!! TACTTACATTTTAGGACGGA+AGG + chr6_3:59360876-59360895 Msa0955340:intron 35.0%
!! ATTGTACCGCACATTTTTAG+AGG + chr6_3:59361209-59361228 Msa0955340:intron 35.0%
!!! CCTAATTTTTTTTAGTGGCC+GGG + chr6_3:59361275-59361294 Msa0955340:intron 35.0%
!!! CTAATTTTTTTTAGTGGCCG+GGG + chr6_3:59361276-59361295 Msa0955340:intron 35.0%
TAATGCTAGAAGAGATGATG+AGG + chr6_3:59361547-59361566 Msa0955340:CDS 35.0%
GGAAGTCAATCAAGATGTTA+TGG + chr6_3:59361568-59361587 Msa0955340:CDS 35.0%
GCAACTATGTTAGCAATTTC+CGG - chr6_3:59361642-59361661 None:intergenic 35.0%
GCTCAATTCATACAAATGGT+TGG - chr6_3:59361681-59361700 None:intergenic 35.0%
! AATATATGGTGGGGGAAGAT+GGG - chr6_3:59357014-59357033 None:intergenic 40.0%
TGGGAAGAGAATATATGGTG+GGG - chr6_3:59357023-59357042 None:intergenic 40.0%
CATGGGAAGAGAATATATGG+TGG - chr6_3:59357025-59357044 None:intergenic 40.0%
CAAGAAGTGGAAAGAGACAT+GGG - chr6_3:59357042-59357061 None:intergenic 40.0%
ACAAGAAGTGGAAAGAGACA+TGG - chr6_3:59357043-59357062 None:intergenic 40.0%
AGCAAGAGGGAGAAAACTAT+AGG + chr6_3:59357183-59357202 Msa0955340:five_prime_UTR 40.0%
GGAGAAAACTATAGGTGAAG+AGG + chr6_3:59357191-59357210 Msa0955340:five_prime_UTR 40.0%
ATATGTGTAGTAGAGGCCAT+TGG + chr6_3:59357317-59357336 Msa0955340:exon 40.0%
ATCTGAGGATGAGAAGCTTA+GGG + chr6_3:59357345-59357364 Msa0955340:CDS 40.0%
!!! GCCAGATTTTAGCTGTGTAT+TGG + chr6_3:59357800-59357819 Msa0955340:intron 40.0%
CCTAATAAAGCAAATGAGCG+GGG - chr6_3:59357890-59357909 None:intergenic 40.0%
! CCTAATAAGGGATTAGTGGA+GGG - chr6_3:59358099-59358118 None:intergenic 40.0%
! ACCTAATAAGGGATTAGTGG+AGG - chr6_3:59358100-59358119 None:intergenic 40.0%
! GGGTTTTTGTTGAGGTAGAA+TGG - chr6_3:59358230-59358249 None:intergenic 40.0%
! ATTATTTACCCGGTTTTGCC+GGG - chr6_3:59358669-59358688 None:intergenic 40.0%
! GATTATTTACCCGGTTTTGC+CGG - chr6_3:59358670-59358689 None:intergenic 40.0%
! TAAGTGCAACCAAAAGCATG+TGG - chr6_3:59358855-59358874 None:intergenic 40.0%
AAATTGTGTGCATGGGTGTA+GGG - chr6_3:59358879-59358898 None:intergenic 40.0%
! TGATAATTTGGTGGTAGGGA+TGG - chr6_3:59359185-59359204 None:intergenic 40.0%
! GGAAAAGTTGTAGGTTGAGA+TGG + chr6_3:59359284-59359303 Msa0955340:CDS 40.0%
AAACAGAAATCCATTCACGG+AGG + chr6_3:59359330-59359349 Msa0955340:CDS 40.0%
GAATCATTGGCATGTGATGA+TGG + chr6_3:59359450-59359469 Msa0955340:CDS 40.0%
GGACCATGAAAGTGAAACTT+AGG - chr6_3:59359652-59359671 None:intergenic 40.0%
ATGGACCAAAGTCATTGACA+GGG + chr6_3:59359918-59359937 Msa0955340:intron 40.0%
!! GATCATTTTTCGCAACATGC+AGG - chr6_3:59360176-59360195 None:intergenic 40.0%
! TAGAGTTGGTTGGGATTTGA+TGG - chr6_3:59360222-59360241 None:intergenic 40.0%
!! GTTTTAGCAACATGCACCTT+TGG + chr6_3:59360444-59360463 Msa0955340:intron 40.0%
! TTTTTCTAGACAGCCCTAAG+TGG + chr6_3:59361138-59361157 Msa0955340:intron 40.0%
CTTGGATACTCATTCATGAG+AGG - chr6_3:59361171-59361190 None:intergenic 40.0%
CCAAGCAAACACAAAGACTT+CGG + chr6_3:59361186-59361205 Msa0955340:intron 40.0%
CCCGGCCACTAAAAAAAATT+AGG - chr6_3:59361278-59361297 None:intergenic 40.0%
! TGTTATGGCACTGAAGAACA+AGG + chr6_3:59361583-59361602 Msa0955340:CDS 40.0%
! GAATATATGGTGGGGGAAGA+TGG - chr6_3:59357015-59357034 None:intergenic 45.0%
GGGAAGAGAATATATGGTGG+GGG - chr6_3:59357022-59357041 None:intergenic 45.0%
CTAAGCTTCTCATCCTCAGA+TGG - chr6_3:59357346-59357365 None:intergenic 45.0%
CATCTGAGGATGAGAAGCTT+AGG + chr6_3:59357344-59357363 Msa0955340:CDS 45.0%
GCTATGGCGTTCCAATTATG+AGG - chr6_3:59357391-59357410 None:intergenic 45.0%
! TCCTCGGAGATTTTCAGCTA+TGG - chr6_3:59357407-59357426 None:intergenic 45.0%
GAAAATCTCCGAGGAAGATC+AGG + chr6_3:59357412-59357431 Msa0955340:CDS 45.0%
! CCCCGCTCATTTGCTTTATT+AGG + chr6_3:59357887-59357906 Msa0955340:intron 45.0%
CCCTCCACTAATCCCTTATT+AGG + chr6_3:59358096-59358115 Msa0955340:intron 45.0%
AGCTCATGATATGCTCACCA+GGG - chr6_3:59358290-59358309 None:intergenic 45.0%
TATATGCAACCCGGCAAAAC+CGG + chr6_3:59358657-59358676 Msa0955340:intron 45.0%
AATTGTGTGCATGGGTGTAG+GGG - chr6_3:59358878-59358897 None:intergenic 45.0%
CAAATTGTGTGCATGGGTGT+AGG - chr6_3:59358880-59358899 None:intergenic 45.0%
! TAATTTGGTGGTAGGGATGG+AGG - chr6_3:59359182-59359201 None:intergenic 45.0%
TCTTCTTCTTCCTCCGTGAA+TGG - chr6_3:59359343-59359362 None:intergenic 45.0%
TACAGCATTATCAGTCCGTC+CGG - chr6_3:59359428-59359447 None:intergenic 45.0%
AAGAGCTATGAGAGACACGA+GGG - chr6_3:59359621-59359640 None:intergenic 45.0%
AAAGAGCTATGAGAGACACG+AGG - chr6_3:59359622-59359641 None:intergenic 45.0%
CATGGACCAAAGTCATTGAC+AGG + chr6_3:59359917-59359936 Msa0955340:intron 45.0%
!! TTGGCTTGTTGTAGCTAGCT+TGG - chr6_3:59360107-59360126 None:intergenic 45.0%
!!! ATTTTAGGACGGAAGGACTG+AGG + chr6_3:59360883-59360902 Msa0955340:intron 45.0%
!!! TTTTAGGACGGAAGGACTGA+GGG + chr6_3:59360884-59360903 Msa0955340:intron 45.0%
AGTTCGTGAATTGTCGGTCA+TGG + chr6_3:59361079-59361098 Msa0955340:intron 45.0%
CCGAAGTCTTTGTGTTTGCT+TGG - chr6_3:59361189-59361208 None:intergenic 45.0%
TGAGCTTAGCTCAGCTGATT+GGG - chr6_3:59361342-59361361 None:intergenic 45.0%
ATGAGCTTAGCTCAGCTGAT+TGG - chr6_3:59361343-59361362 None:intergenic 45.0%
GAGACACACACACACTAAGT+AGG - chr6_3:59361375-59361394 None:intergenic 45.0%
!!! TTTTTTATTTGAAAAATATT+TGG + chr6_3:59357760-59357779 Msa0955340:intron 5.0%
!!! TTTTTATTTGAAAAATATTT+GGG + chr6_3:59357761-59357780 Msa0955340:intron 5.0%
!!! GAAAATTTTAAATAATTATT+TGG + chr6_3:59358379-59358398 Msa0955340:intron 5.0%
!!! ATTTTAATCAATATTATATT+TGG + chr6_3:59358408-59358427 Msa0955340:intron 5.0%
!!! TTTTAATCAATATTATATTT+GGG + chr6_3:59358409-59358428 Msa0955340:intron 5.0%
!!! TAATCAATTAATTTTTTTTT+TGG - chr6_3:59358715-59358734 None:intergenic 5.0%
!!! TTAATTTTTTTTTTTTTGTT+TGG + chr6_3:59361103-59361122 Msa0955340:intron 5.0%
CATCCTCAGATGGTCTCCAA+TGG - chr6_3:59357336-59357355 None:intergenic 50.0%
GGATGAGAAGCTTAGGGAGT+TGG + chr6_3:59357351-59357370 Msa0955340:CDS 50.0%
TGAGAAGCTTAGGGAGTTGG+TGG + chr6_3:59357354-59357373 Msa0955340:CDS 50.0%
!! AGGGAGTTGGTGGAAAGCTA+TGG + chr6_3:59357364-59357383 Msa0955340:CDS 50.0%
GCCATAGCTGAAAATCTCCG+AGG + chr6_3:59357403-59357422 Msa0955340:CDS 50.0%
TCTTTACCCATCCATGACCC+TGG + chr6_3:59358270-59358289 Msa0955340:intron 50.0%
TGATATGCTCACCAGGGTCA+TGG - chr6_3:59358284-59358303 None:intergenic 50.0%
GAGCTCATGATATGCTCACC+AGG - chr6_3:59358291-59358310 None:intergenic 50.0%
ATATGCAACCCGGCAAAACC+GGG + chr6_3:59358658-59358677 Msa0955340:intron 50.0%
GTCATTGCAAGACACTTCCC+CGG + chr6_3:59359406-59359425 Msa0955340:CDS 50.0%
ACAGCATTATCAGTCCGTCC+GGG - chr6_3:59359427-59359446 None:intergenic 50.0%
!! ATTGGCATGTGATGATGGCG+AGG + chr6_3:59359455-59359474 Msa0955340:CDS 50.0%
GCTGACCCTGTCAATGACTT+TGG - chr6_3:59359926-59359945 None:intergenic 50.0%
! TGTTGTAGCTAGCTTGGTCG+TGG - chr6_3:59360101-59360120 None:intergenic 50.0%
TTCTAGACAGCCCTAAGTGG+TGG + chr6_3:59361141-59361160 Msa0955340:intron 50.0%
! GAGAGGTTAGCCACCACTTA+GGG - chr6_3:59361154-59361173 None:intergenic 50.0%
! TGAGAGGTTAGCCACCACTT+AGG - chr6_3:59361155-59361174 None:intergenic 50.0%
AAAGTCCAGGGTTCAAACCC+CGG - chr6_3:59361296-59361315 None:intergenic 50.0%
TCAGCTGAGCTAAGCTCATG+AGG + chr6_3:59361344-59361363 Msa0955340:intron 50.0%
AGGCCATTGGAGACCATCTG+AGG + chr6_3:59357330-59357349 Msa0955340:CDS 55.0%
TGCTCACCAGGGTCATGGAT+GGG - chr6_3:59358279-59358298 None:intergenic 55.0%
ATGCTCACCAGGGTCATGGA+TGG - chr6_3:59358280-59358299 None:intergenic 55.0%
TTGCAAGACACTTCCCCGGA+CGG + chr6_3:59359410-59359429 Msa0955340:CDS 55.0%
CAGCATTATCAGTCCGTCCG+GGG - chr6_3:59359426-59359445 None:intergenic 55.0%
TGGCGAGGATTCGTCGAGAA+AGG + chr6_3:59359470-59359489 Msa0955340:CDS 55.0%
AGTGGCCGGGGTTTGAACCC+TGG + chr6_3:59361288-59361307 Msa0955340:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 59357002 59361864 59357002 ID=Msa0955340;Name=Msa0955340
chr6_3 mRNA 59357002 59361864 59357002 ID=Msa0955340-mRNA-1;Parent=Msa0955340;Name=Msa0955340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=317|1|1|1|1|1|3|212|233
chr6_3 exon 59357002 59357433 59357002 ID=Msa0955340-mRNA-1:exon:11693;Parent=Msa0955340-mRNA-1
chr6_3 exon 59359284 59359697 59359284 ID=Msa0955340-mRNA-1:exon:11694;Parent=Msa0955340-mRNA-1
chr6_3 exon 59361480 59361864 59361480 ID=Msa0955340-mRNA-1:exon:11695;Parent=Msa0955340-mRNA-1
chr6_3 five_prime_UTR 59357002 59357318 59357002 ID=Msa0955340-mRNA-1:five_prime_utr;Parent=Msa0955340-mRNA-1
chr6_3 CDS 59357319 59357433 59357319 ID=Msa0955340-mRNA-1:cds;Parent=Msa0955340-mRNA-1
chr6_3 CDS 59359284 59359697 59359284 ID=Msa0955340-mRNA-1:cds;Parent=Msa0955340-mRNA-1
chr6_3 CDS 59361480 59361652 59361480 ID=Msa0955340-mRNA-1:cds;Parent=Msa0955340-mRNA-1
chr6_3 three_prime_UTR 59361653 59361864 59361653 ID=Msa0955340-mRNA-1:three_prime_utr;Parent=Msa0955340-mRNA-1
Gene Sequence

>Msa0955340

ATGTGTAGTAGAGGCCATTGGAGACCATCTGAGGATGAGAAGCTTAGGGAGTTGGTGGAAAGCTATGGACCTCATAATTGGAACGCCATAGCTGAAAATCTCCGAGGAAGATCAGGGAAAAGTTGTAGGTTGAGATGGTTCAATCAATTGGATCCAAGAATAAACAGAAATCCATTCACGGAGGAAGAAGAAGAGCGTCTTATAACTTCTCATCGAATTCATGGTAATAGATGGGCGGTCATTGCAAGACACTTCCCCGGACGGACTGATAATGCTGTAAAGAATCATTGGCATGTGATGATGGCGAGGATTCGTCGAGAAAGGTATAAGATCTATGCAAAAGGTCCTCTTGATCATCACACAATTTTCTCTCCAAATGATCATCAAACAAACTTTGAGAGAACAAATCTCCACTCTTTTGTTGAGAAGTATCATGAAAAGCATAATCACCCTCGTGTCTCTCATAGCTCTTTCCAATTTCCTAAGTTTCACTTTCATGGTCCAAACTCTTGTTCCACAATGTTTCAAGATAAAAGTCAATCAATTGAGTTCTATGATTTTCTTCAAGTAGATTCCAATAAAAGTGAAGTAACTGATAATGCTAGAAGAGATGATGAGGAAGTCAATCAAGATGTTATGGCACTGAAGAACAAGGAAAACAATGTTCAATTCATTGATTTTTTGTCTACCGGAAATTGCTAA
Protein sequence

>Msa0955340

MCSRGHWRPSEDEKLRELVESYGPHNWNAIAENLRGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLITSHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERYKIYAKGPLDHHTIFSPNDHQTNFERTNLHSFVEKYHEKHNHPRVSHSSFQFPKFHFHGPNSCSTMFQDKSQSIEFYDFLQVDSNKSEVTDNARRDDEEVNQDVMALKNKENNVQFIDFLSTGNC*