Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0960700 | sp|Q54BC9|DYRK2_DICDI | 32.653 | 245 | 139 | 3 | 7 | 230 | 663 | 902 | 1.75e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0960700 | A0A072TFB0 | 88.797 | 241 | 6 | 1 | 20 | 239 | 53 | 293 | 7.57e-153 | 436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045350 | Msa0960700 | -0.811392 | 7.163150e-51 | -8.615850e-47 |
| Msa0375440 | Msa0960700 | -0.807849 | 4.134818e-50 | -8.615850e-47 |
| Msa0375480 | Msa0960700 | -0.808740 | 2.669049e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0960700 | MtrunA17_Chr6g0480541 | 88.889 | 243 | 6 | 1 | 18 | 239 | 967 | 1209 | 1.30e-151 | 452 |
| Msa0960700 | MtrunA17_Chr5g0437131 | 59.677 | 248 | 79 | 1 | 11 | 237 | 465 | 712 | 1.12e-102 | 313 |
| Msa0960700 | MtrunA17_Chr6g0480291 | 91.765 | 85 | 6 | 1 | 155 | 239 | 1 | 84 | 2.12e-50 | 159 |
| Msa0960700 | MtrunA17_Chr6g0480481 | 74.737 | 95 | 3 | 1 | 57 | 130 | 106 | 200 | 1.67e-40 | 138 |
| Msa0960700 | MtrunA17_Chr6g0480471 | 76.812 | 69 | 8 | 1 | 112 | 180 | 15 | 75 | 1.21e-29 | 105 |
| Msa0960700 | MtrunA17_Chr3g0139371 | 29.537 | 281 | 146 | 5 | 1 | 233 | 125 | 401 | 7.27e-29 | 112 |
| Msa0960700 | MtrunA17_Chr8g0369241 | 34.028 | 288 | 113 | 10 | 20 | 236 | 211 | 492 | 1.22e-27 | 110 |
| Msa0960700 | MtrunA17_Chr1g0210061 | 30.556 | 252 | 125 | 7 | 20 | 231 | 685 | 926 | 1.84e-27 | 110 |
| Msa0960700 | MtrunA17_Chr4g0058241 | 30.000 | 260 | 129 | 6 | 20 | 230 | 168 | 423 | 1.63e-25 | 103 |
| Msa0960700 | MtrunA17_Chr3g0116701 | 29.615 | 260 | 130 | 6 | 20 | 230 | 164 | 419 | 1.90e-24 | 100 |
| Msa0960700 | MtrunA17_Chr3g0123491 | 30.827 | 266 | 123 | 6 | 20 | 231 | 163 | 421 | 1.90e-23 | 97.8 |
| Msa0960700 | MtrunA17_Chr6g0480191 | 95.238 | 42 | 2 | 0 | 198 | 239 | 1 | 42 | 3.07e-23 | 88.6 |
| Msa0960700 | MtrunA17_Chr8g0369451 | 30.603 | 232 | 113 | 7 | 24 | 230 | 75 | 283 | 1.52e-21 | 92.4 |
| Msa0960700 | MtrunA17_Chr6g0480331 | 92.683 | 41 | 3 | 0 | 177 | 217 | 2 | 42 | 2.58e-21 | 84.0 |
| Msa0960700 | MtrunA17_Chr5g0409421 | 29.565 | 230 | 118 | 8 | 24 | 230 | 75 | 283 | 1.74e-19 | 86.7 |
| Msa0960700 | MtrunA17_Chr1g0194201 | 28.862 | 246 | 126 | 9 | 17 | 236 | 143 | 365 | 1.76e-18 | 83.6 |
| Msa0960700 | MtrunA17_Chr8g0339221 | 26.407 | 231 | 131 | 6 | 21 | 230 | 72 | 284 | 2.50e-18 | 83.2 |
| Msa0960700 | MtrunA17_Chr7g0270371 | 28.692 | 237 | 124 | 8 | 17 | 229 | 143 | 358 | 4.14e-18 | 82.4 |
| Msa0960700 | MtrunA17_Chr1g0193081 | 27.869 | 244 | 131 | 8 | 17 | 236 | 143 | 365 | 5.62e-18 | 82.0 |
| Msa0960700 | MtrunA17_Chr1g0187371 | 25.862 | 232 | 130 | 6 | 24 | 231 | 96 | 309 | 1.59e-17 | 80.1 |
| Msa0960700 | MtrunA17_Chr4g0065851 | 27.197 | 239 | 124 | 6 | 22 | 231 | 100 | 317 | 1.98e-17 | 80.9 |
| Msa0960700 | MtrunA17_Chr4g0057791 | 30.583 | 206 | 107 | 7 | 51 | 230 | 316 | 511 | 2.62e-17 | 80.5 |
| Msa0960700 | MtrunA17_Chr5g0443351 | 28.390 | 236 | 119 | 7 | 24 | 230 | 99 | 313 | 2.69e-17 | 80.5 |
| Msa0960700 | MtrunA17_Chr8g0348481 | 26.891 | 238 | 124 | 7 | 20 | 231 | 111 | 324 | 6.94e-17 | 78.6 |
| Msa0960700 | MtrunA17_Chr2g0287271 | 27.119 | 236 | 122 | 6 | 24 | 230 | 102 | 316 | 7.18e-17 | 79.3 |
| Msa0960700 | MtrunA17_Chr2g0277011 | 29.851 | 201 | 102 | 7 | 60 | 236 | 195 | 380 | 8.15e-17 | 79.0 |
| Msa0960700 | MtrunA17_Chr4g0045841 | 26.923 | 234 | 128 | 7 | 20 | 231 | 129 | 341 | 9.73e-17 | 78.6 |
| Msa0960700 | MtrunA17_Chr4g0002001 | 28.085 | 235 | 123 | 7 | 24 | 231 | 89 | 304 | 1.05e-16 | 77.8 |
| Msa0960700 | MtrunA17_Chr8g0378831 | 26.809 | 235 | 128 | 7 | 26 | 236 | 111 | 325 | 1.17e-16 | 78.2 |
| Msa0960700 | MtrunA17_Chr3g0102571 | 29.016 | 193 | 100 | 5 | 62 | 231 | 189 | 367 | 1.59e-16 | 77.8 |
| Msa0960700 | MtrunA17_Chr4g0027671 | 31.973 | 147 | 86 | 3 | 94 | 231 | 338 | 479 | 1.98e-16 | 77.8 |
| Msa0960700 | MtrunA17_Chr8g0350311 | 28.846 | 208 | 109 | 7 | 56 | 239 | 240 | 432 | 4.98e-16 | 76.6 |
| Msa0960700 | MtrunA17_Chr2g0320011 | 29.851 | 201 | 102 | 7 | 60 | 236 | 193 | 378 | 6.34e-16 | 76.3 |
| Msa0960700 | MtrunA17_Chr3g0102601 | 29.775 | 178 | 104 | 5 | 61 | 231 | 42 | 205 | 8.69e-16 | 74.3 |
| Msa0960700 | MtrunA17_Chr5g0407121 | 31.973 | 147 | 87 | 4 | 94 | 231 | 273 | 415 | 9.38e-16 | 75.9 |
| Msa0960700 | MtrunA17_Chr8g0370321 | 32.414 | 145 | 86 | 4 | 94 | 230 | 270 | 410 | 1.06e-15 | 75.5 |
| Msa0960700 | MtrunA17_Chr4g0030151 | 27.004 | 237 | 125 | 9 | 20 | 231 | 113 | 326 | 1.13e-15 | 75.1 |
| Msa0960700 | MtrunA17_Chr2g0284091 | 30.151 | 199 | 100 | 7 | 62 | 236 | 147 | 330 | 1.15e-15 | 75.5 |
| Msa0960700 | MtrunA17_Chr2g0320631 | 32.192 | 146 | 87 | 4 | 94 | 231 | 337 | 478 | 1.72e-15 | 75.1 |
| Msa0960700 | MtrunA17_Chr8g0392811 | 26.923 | 234 | 125 | 6 | 24 | 230 | 194 | 408 | 1.73e-15 | 75.1 |
| Msa0960700 | MtrunA17_Chr4g0030231 | 27.615 | 239 | 129 | 8 | 20 | 235 | 114 | 331 | 1.99e-15 | 74.7 |
| Msa0960700 | MtrunA17_Chr3g0141871 | 25.941 | 239 | 131 | 7 | 26 | 239 | 111 | 328 | 2.79e-15 | 74.3 |
| Msa0960700 | MtrunA17_Chr3g0122781 | 28.182 | 220 | 109 | 9 | 51 | 230 | 512 | 722 | 3.56e-15 | 74.3 |
| Msa0960700 | MtrunA17_Chr8g0377071 | 29.612 | 206 | 109 | 8 | 51 | 230 | 481 | 676 | 3.56e-15 | 74.3 |
| Msa0960700 | MtrunA17_Chr3g0096631 | 27.686 | 242 | 113 | 8 | 24 | 230 | 102 | 316 | 5.35e-15 | 73.9 |
| Msa0960700 | MtrunA17_Chr5g0397261 | 26.695 | 236 | 127 | 7 | 20 | 231 | 115 | 328 | 1.07e-14 | 72.4 |
| Msa0960700 | MtrunA17_Chr8g0359091 | 26.050 | 238 | 122 | 6 | 24 | 230 | 103 | 317 | 2.30e-14 | 72.0 |
| Msa0960700 | MtrunA17_Chr1g0179611 | 30.612 | 147 | 88 | 4 | 94 | 231 | 338 | 479 | 5.59e-14 | 70.9 |
| Msa0960700 | MtrunA17_Chr6g0482681 | 26.695 | 236 | 123 | 6 | 24 | 230 | 166 | 380 | 9.93e-14 | 70.1 |
| Msa0960700 | MtrunA17_Chr3g0130781 | 26.000 | 250 | 138 | 7 | 24 | 236 | 95 | 334 | 1.66e-13 | 69.3 |
| Msa0960700 | MtrunA17_Chr7g0246591 | 28.780 | 205 | 107 | 7 | 56 | 236 | 242 | 431 | 1.83e-13 | 69.3 |
| Msa0960700 | MtrunA17_Chr4g0059751 | 31.298 | 131 | 59 | 3 | 45 | 145 | 177 | 306 | 2.21e-13 | 68.9 |
| Msa0960700 | MtrunA17_Chr2g0314321 | 24.706 | 255 | 125 | 6 | 22 | 230 | 100 | 333 | 1.38e-12 | 66.6 |
| Msa0960700 | MtrunA17_Chr7g0218071 | 24.878 | 205 | 116 | 4 | 45 | 225 | 210 | 400 | 1.43e-11 | 63.9 |
| Msa0960700 | MtrunA17_Chr7g0245031 | 36.957 | 92 | 37 | 1 | 62 | 132 | 254 | 345 | 2.29e-11 | 63.2 |
| Msa0960700 | MtrunA17_Chr4g0051261 | 23.171 | 246 | 142 | 5 | 11 | 230 | 63 | 287 | 2.43e-11 | 62.4 |
| Msa0960700 | MtrunA17_Chr4g0047201 | 31.481 | 108 | 53 | 3 | 51 | 137 | 300 | 407 | 6.95e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0960700 | AT1G73450.1 | 79.200 | 250 | 31 | 1 | 11 | 239 | 903 | 1152 | 6.52e-140 | 421 |
| Msa0960700 | AT1G73460.2 | 79.200 | 250 | 31 | 1 | 11 | 239 | 920 | 1169 | 1.26e-139 | 420 |
| Msa0960700 | AT1G73460.1 | 79.200 | 250 | 31 | 1 | 11 | 239 | 920 | 1169 | 1.26e-139 | 420 |
| Msa0960700 | AT3G17750.1 | 80.400 | 250 | 28 | 1 | 11 | 239 | 889 | 1138 | 1.06e-136 | 412 |
| Msa0960700 | AT2G40120.1 | 57.438 | 242 | 82 | 1 | 11 | 231 | 323 | 564 | 9.99e-96 | 291 |
| Msa0960700 | AT4G03175.1 | 52.174 | 92 | 44 | 0 | 140 | 231 | 2 | 93 | 8.15e-32 | 112 |
| Msa0960700 | AT4G32660.4 | 31.154 | 260 | 126 | 6 | 20 | 230 | 29 | 284 | 2.33e-28 | 109 |
| Msa0960700 | AT4G24740.6 | 30.268 | 261 | 129 | 6 | 20 | 231 | 65 | 321 | 3.45e-28 | 109 |
| Msa0960700 | AT4G24740.9 | 30.268 | 261 | 129 | 6 | 20 | 231 | 65 | 321 | 3.45e-28 | 109 |
| Msa0960700 | AT4G24740.2 | 30.268 | 261 | 129 | 6 | 20 | 231 | 65 | 321 | 3.45e-28 | 109 |
| Msa0960700 | AT4G24740.7 | 30.268 | 261 | 129 | 6 | 20 | 231 | 130 | 386 | 1.30e-27 | 108 |
| Msa0960700 | AT4G32660.1 | 31.154 | 260 | 126 | 6 | 20 | 230 | 141 | 396 | 1.38e-27 | 109 |
| Msa0960700 | AT4G32660.3 | 29.749 | 279 | 143 | 6 | 1 | 230 | 114 | 388 | 1.54e-27 | 108 |
| Msa0960700 | AT4G24740.1 | 30.268 | 261 | 129 | 6 | 20 | 231 | 168 | 424 | 1.68e-27 | 109 |
| Msa0960700 | AT1G13350.1 | 30.952 | 252 | 125 | 9 | 20 | 231 | 517 | 759 | 5.16e-26 | 106 |
| Msa0960700 | AT3G25840.1 | 31.301 | 246 | 131 | 9 | 20 | 231 | 692 | 933 | 6.40e-26 | 106 |
| Msa0960700 | AT3G53570.3 | 29.545 | 264 | 130 | 6 | 20 | 231 | 171 | 430 | 4.37e-25 | 102 |
| Msa0960700 | AT3G53570.5 | 29.545 | 264 | 130 | 6 | 20 | 231 | 171 | 430 | 4.37e-25 | 102 |
| Msa0960700 | AT3G53570.1 | 29.545 | 264 | 130 | 6 | 20 | 231 | 185 | 444 | 5.14e-25 | 102 |
| Msa0960700 | AT3G53570.4 | 29.545 | 264 | 130 | 6 | 20 | 231 | 185 | 444 | 5.14e-25 | 102 |
| Msa0960700 | AT3G53570.2 | 29.545 | 264 | 130 | 6 | 20 | 231 | 185 | 444 | 5.14e-25 | 102 |
| Msa0960700 | AT5G35980.2 | 31.449 | 283 | 121 | 8 | 23 | 236 | 197 | 475 | 2.41e-24 | 101 |
| Msa0960700 | AT4G32660.2 | 31.132 | 212 | 98 | 4 | 1 | 168 | 122 | 329 | 6.13e-24 | 98.6 |
| Msa0960700 | AT5G35980.3 | 31.449 | 283 | 121 | 8 | 23 | 236 | 162 | 440 | 6.95e-24 | 100 |
| Msa0960700 | AT3G25840.2 | 30.800 | 250 | 135 | 9 | 16 | 231 | 426 | 671 | 8.13e-24 | 100 |
| Msa0960700 | AT1G13350.3 | 30.159 | 252 | 138 | 7 | 14 | 231 | 585 | 832 | 8.53e-24 | 100 |
| Msa0960700 | AT5G35980.1 | 31.449 | 283 | 121 | 8 | 23 | 236 | 197 | 475 | 8.89e-24 | 100 |
| Msa0960700 | AT1G13350.2 | 30.556 | 252 | 137 | 8 | 14 | 231 | 539 | 786 | 1.91e-23 | 99.0 |
| Msa0960700 | AT4G24740.5 | 33.880 | 183 | 73 | 3 | 20 | 158 | 65 | 243 | 2.32e-23 | 95.1 |
| Msa0960700 | AT3G53640.1 | 30.159 | 252 | 138 | 7 | 14 | 231 | 393 | 640 | 2.36e-23 | 98.6 |
| Msa0960700 | AT4G24740.3 | 33.880 | 183 | 73 | 3 | 20 | 158 | 168 | 346 | 7.84e-23 | 95.5 |
| Msa0960700 | AT4G24740.10 | 31.280 | 211 | 96 | 5 | 70 | 231 | 8 | 218 | 2.06e-22 | 92.0 |
| Msa0960700 | AT4G24740.8 | 31.280 | 211 | 96 | 5 | 70 | 231 | 8 | 218 | 2.06e-22 | 92.0 |
| Msa0960700 | AT1G76540.1 | 27.586 | 232 | 126 | 6 | 24 | 231 | 92 | 305 | 2.48e-20 | 88.2 |
| Msa0960700 | AT4G19110.3 | 26.180 | 233 | 128 | 5 | 21 | 230 | 16 | 227 | 1.27e-19 | 87.0 |
| Msa0960700 | AT4G19110.2 | 26.180 | 233 | 128 | 5 | 21 | 230 | 72 | 283 | 1.39e-19 | 87.4 |
| Msa0960700 | AT4G19110.1 | 26.180 | 233 | 128 | 5 | 21 | 230 | 72 | 283 | 1.49e-19 | 87.4 |
| Msa0960700 | AT4G13020.1 | 28.384 | 229 | 124 | 6 | 24 | 231 | 75 | 284 | 5.03e-19 | 85.5 |
| Msa0960700 | AT4G13020.7 | 28.384 | 229 | 124 | 6 | 24 | 231 | 75 | 284 | 6.20e-19 | 85.1 |
| Msa0960700 | AT4G13020.4 | 28.384 | 229 | 124 | 6 | 24 | 231 | 75 | 284 | 6.76e-19 | 85.1 |
| Msa0960700 | AT4G13020.6 | 28.384 | 229 | 124 | 6 | 24 | 231 | 75 | 284 | 6.84e-19 | 85.1 |
| Msa0960700 | AT4G13020.2 | 28.384 | 229 | 124 | 6 | 24 | 231 | 83 | 292 | 7.14e-19 | 85.1 |
| Msa0960700 | AT4G13020.3 | 28.384 | 229 | 124 | 6 | 24 | 231 | 83 | 292 | 7.17e-19 | 85.1 |
| Msa0960700 | AT4G13020.5 | 28.384 | 229 | 124 | 6 | 24 | 231 | 84 | 293 | 7.97e-19 | 85.1 |
| Msa0960700 | AT4G13020.8 | 28.384 | 229 | 124 | 6 | 24 | 231 | 84 | 293 | 8.36e-19 | 84.7 |
| Msa0960700 | AT1G20930.1 | 26.809 | 235 | 124 | 6 | 24 | 231 | 94 | 307 | 1.45e-18 | 83.2 |
| Msa0960700 | AT5G26751.1 | 28.455 | 246 | 127 | 9 | 17 | 236 | 137 | 359 | 3.86e-18 | 82.8 |
| Msa0960700 | AT2G46070.1 | 27.542 | 236 | 125 | 6 | 20 | 231 | 115 | 328 | 7.18e-18 | 82.0 |
| Msa0960700 | AT2G46070.3 | 27.542 | 236 | 125 | 6 | 20 | 231 | 149 | 362 | 8.19e-18 | 82.0 |
| Msa0960700 | AT5G45430.1 | 25.751 | 233 | 129 | 6 | 21 | 230 | 72 | 283 | 1.08e-17 | 82.0 |
| Msa0960700 | AT5G45430.2 | 25.751 | 233 | 129 | 6 | 21 | 230 | 72 | 283 | 1.19e-17 | 82.0 |
| Msa0960700 | AT3G59790.1 | 27.966 | 236 | 120 | 6 | 22 | 231 | 135 | 346 | 1.22e-17 | 81.3 |
| Msa0960700 | AT5G14640.1 | 30.348 | 201 | 101 | 7 | 60 | 236 | 179 | 364 | 4.62e-17 | 79.7 |
| Msa0960700 | AT5G14640.2 | 30.348 | 201 | 101 | 7 | 60 | 236 | 179 | 364 | 4.62e-17 | 79.7 |
| Msa0960700 | AT3G44850.1 | 32.000 | 150 | 88 | 4 | 91 | 231 | 338 | 482 | 6.87e-17 | 79.7 |
| Msa0960700 | AT3G14720.1 | 27.966 | 236 | 124 | 6 | 22 | 230 | 100 | 316 | 6.96e-17 | 79.7 |
| Msa0960700 | AT3G05840.2 | 27.049 | 244 | 133 | 8 | 17 | 236 | 141 | 363 | 7.52e-17 | 79.3 |
| Msa0960700 | AT3G05840.1 | 27.049 | 244 | 133 | 8 | 17 | 236 | 141 | 363 | 7.52e-17 | 79.3 |
| Msa0960700 | AT1G09840.11 | 31.088 | 193 | 94 | 7 | 60 | 228 | 61 | 238 | 9.13e-17 | 78.2 |
| Msa0960700 | AT3G14720.2 | 28.205 | 234 | 122 | 6 | 24 | 230 | 102 | 316 | 1.05e-16 | 79.0 |
| Msa0960700 | AT3G14720.3 | 28.205 | 234 | 122 | 6 | 24 | 230 | 102 | 316 | 1.05e-16 | 79.0 |
| Msa0960700 | AT4G01370.1 | 27.542 | 236 | 125 | 7 | 20 | 231 | 117 | 330 | 1.38e-16 | 78.2 |
| Msa0960700 | AT4G35500.2 | 31.507 | 146 | 88 | 4 | 94 | 231 | 277 | 418 | 2.06e-16 | 78.2 |
| Msa0960700 | AT4G18710.1 | 30.151 | 199 | 100 | 7 | 62 | 236 | 147 | 330 | 2.36e-16 | 77.8 |
| Msa0960700 | AT4G11330.1 | 27.778 | 234 | 116 | 8 | 26 | 231 | 122 | 330 | 2.45e-16 | 77.8 |
| Msa0960700 | AT4G35500.1 | 31.507 | 146 | 88 | 4 | 94 | 231 | 276 | 417 | 2.51e-16 | 77.8 |
| Msa0960700 | AT5G19010.1 | 29.004 | 231 | 114 | 7 | 24 | 225 | 102 | 311 | 2.61e-16 | 78.2 |
| Msa0960700 | AT2G38620.2 | 27.542 | 236 | 125 | 8 | 23 | 231 | 88 | 304 | 4.03e-16 | 76.3 |
| Msa0960700 | AT1G09840.3 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.7 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.10 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.6 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.4 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.1 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.9 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.5 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.8 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT1G09840.2 | 30.348 | 201 | 101 | 7 | 60 | 236 | 188 | 373 | 5.20e-16 | 77.0 |
| Msa0960700 | AT5G22840.1 | 31.333 | 150 | 89 | 4 | 91 | 231 | 327 | 471 | 5.85e-16 | 77.0 |
| Msa0960700 | AT1G57870.3 | 29.851 | 201 | 102 | 7 | 60 | 236 | 187 | 372 | 6.00e-16 | 76.6 |
| Msa0960700 | AT2G17530.1 | 30.822 | 146 | 89 | 4 | 94 | 231 | 275 | 416 | 6.81e-16 | 76.6 |
| Msa0960700 | AT2G17530.3 | 30.822 | 146 | 89 | 4 | 94 | 231 | 275 | 416 | 6.81e-16 | 76.6 |
| Msa0960700 | AT1G57870.1 | 29.851 | 201 | 102 | 7 | 60 | 236 | 187 | 372 | 6.91e-16 | 76.6 |
| Msa0960700 | AT1G57870.4 | 29.851 | 201 | 102 | 7 | 60 | 236 | 187 | 372 | 6.91e-16 | 76.6 |
| Msa0960700 | AT1G57870.2 | 29.851 | 201 | 102 | 7 | 60 | 236 | 187 | 372 | 6.91e-16 | 76.6 |
| Msa0960700 | AT1G10210.2 | 26.939 | 245 | 132 | 7 | 17 | 236 | 103 | 325 | 6.91e-16 | 76.3 |
| Msa0960700 | AT1G10210.3 | 26.939 | 245 | 132 | 7 | 17 | 236 | 103 | 325 | 6.91e-16 | 76.3 |
| Msa0960700 | AT1G10210.1 | 26.939 | 245 | 132 | 7 | 17 | 236 | 103 | 325 | 6.91e-16 | 76.3 |
| Msa0960700 | AT5G63370.2 | 26.601 | 203 | 119 | 7 | 51 | 230 | 264 | 459 | 1.05e-15 | 76.3 |
| Msa0960700 | AT5G63370.3 | 26.601 | 203 | 119 | 7 | 51 | 230 | 264 | 459 | 1.05e-15 | 76.3 |
| Msa0960700 | AT3G18040.2 | 27.542 | 236 | 121 | 6 | 24 | 230 | 12 | 226 | 1.49e-15 | 75.5 |
| Msa0960700 | AT2G01450.3 | 26.639 | 244 | 129 | 7 | 24 | 236 | 93 | 317 | 1.54e-15 | 75.9 |
| Msa0960700 | AT2G01450.1 | 26.639 | 244 | 129 | 7 | 24 | 236 | 93 | 317 | 1.54e-15 | 75.9 |
| Msa0960700 | AT2G01450.2 | 26.639 | 244 | 129 | 7 | 24 | 236 | 93 | 317 | 1.54e-15 | 75.9 |
| Msa0960700 | AT2G01450.4 | 26.639 | 244 | 129 | 7 | 24 | 236 | 93 | 317 | 1.54e-15 | 75.9 |
| Msa0960700 | AT1G06390.2 | 29.353 | 201 | 103 | 7 | 60 | 236 | 175 | 360 | 1.63e-15 | 75.5 |
| Msa0960700 | AT1G06390.1 | 29.353 | 201 | 103 | 7 | 60 | 236 | 175 | 360 | 1.63e-15 | 75.5 |
| Msa0960700 | AT3G18040.5 | 27.542 | 236 | 121 | 6 | 24 | 230 | 95 | 309 | 1.65e-15 | 75.5 |
| Msa0960700 | AT3G18040.1 | 27.542 | 236 | 121 | 6 | 24 | 230 | 100 | 314 | 1.67e-15 | 75.5 |
| Msa0960700 | AT1G01560.2 | 27.236 | 246 | 129 | 8 | 20 | 237 | 114 | 337 | 1.77e-15 | 75.1 |
| Msa0960700 | AT4G00720.1 | 29.756 | 205 | 105 | 7 | 56 | 236 | 239 | 428 | 1.93e-15 | 75.5 |
| Msa0960700 | AT5G63370.7 | 26.601 | 203 | 119 | 7 | 51 | 230 | 398 | 593 | 2.29e-15 | 75.5 |
| Msa0960700 | AT5G63370.8 | 26.601 | 203 | 119 | 7 | 51 | 230 | 398 | 593 | 2.29e-15 | 75.5 |
| Msa0960700 | AT5G63370.4 | 26.601 | 203 | 119 | 7 | 51 | 230 | 398 | 593 | 2.29e-15 | 75.5 |
| Msa0960700 | AT5G63370.6 | 26.601 | 203 | 119 | 7 | 51 | 230 | 398 | 593 | 2.29e-15 | 75.5 |
| Msa0960700 | AT5G63370.1 | 26.601 | 203 | 119 | 7 | 51 | 230 | 398 | 593 | 2.29e-15 | 75.5 |
| Msa0960700 | AT3G18040.3 | 27.542 | 236 | 121 | 6 | 24 | 230 | 209 | 423 | 2.47e-15 | 75.1 |
| Msa0960700 | AT3G53030.1 | 31.333 | 150 | 89 | 4 | 91 | 231 | 323 | 467 | 2.61e-15 | 75.1 |
| Msa0960700 | AT3G61160.4 | 27.404 | 208 | 112 | 6 | 56 | 239 | 203 | 395 | 2.98e-15 | 74.7 |
| Msa0960700 | AT3G18040.4 | 27.542 | 236 | 121 | 6 | 24 | 230 | 209 | 423 | 3.08e-15 | 75.1 |
| Msa0960700 | AT2G30980.1 | 29.353 | 201 | 103 | 7 | 60 | 236 | 177 | 362 | 3.36e-15 | 74.7 |
| Msa0960700 | AT3G61160.1 | 27.404 | 208 | 112 | 6 | 56 | 239 | 203 | 395 | 3.40e-15 | 74.7 |
| Msa0960700 | AT3G61160.2 | 27.404 | 208 | 112 | 6 | 56 | 239 | 210 | 402 | 3.55e-15 | 74.7 |
| Msa0960700 | AT2G18170.1 | 25.105 | 239 | 133 | 6 | 26 | 239 | 111 | 328 | 4.91e-15 | 73.9 |
| Msa0960700 | AT1G67580.1 | 29.612 | 206 | 109 | 8 | 51 | 230 | 502 | 697 | 5.61e-15 | 74.3 |
| Msa0960700 | AT1G67580.2 | 29.612 | 206 | 109 | 8 | 51 | 230 | 502 | 697 | 5.61e-15 | 74.3 |
| Msa0960700 | AT3G54180.1 | 26.891 | 238 | 128 | 8 | 21 | 231 | 84 | 302 | 5.89e-15 | 73.2 |
| Msa0960700 | AT2G42880.1 | 27.311 | 238 | 123 | 7 | 22 | 230 | 100 | 316 | 6.09e-15 | 73.9 |
| Msa0960700 | AT2G42880.2 | 27.542 | 236 | 121 | 7 | 24 | 230 | 102 | 316 | 7.01e-15 | 73.6 |
| Msa0960700 | AT1G07880.2 | 26.891 | 238 | 129 | 7 | 22 | 235 | 108 | 324 | 7.32e-15 | 73.2 |
| Msa0960700 | AT1G73670.1 | 26.271 | 236 | 126 | 7 | 24 | 231 | 167 | 382 | 8.08e-15 | 73.6 |
| Msa0960700 | AT2G38620.4 | 28.571 | 203 | 99 | 8 | 56 | 231 | 59 | 242 | 1.25e-14 | 71.6 |
| Msa0960700 | AT2G46070.2 | 26.667 | 225 | 119 | 6 | 20 | 220 | 115 | 317 | 1.40e-14 | 72.4 |
| Msa0960700 | AT1G59580.2 | 25.847 | 236 | 129 | 6 | 26 | 236 | 111 | 325 | 2.86e-14 | 71.6 |
| Msa0960700 | AT1G59580.1 | 25.847 | 236 | 129 | 6 | 26 | 236 | 111 | 325 | 2.86e-14 | 71.6 |
| Msa0960700 | AT3G61160.3 | 32.593 | 135 | 67 | 4 | 56 | 166 | 203 | 337 | 3.18e-14 | 71.2 |
| Msa0960700 | AT3G61160.6 | 32.593 | 135 | 67 | 4 | 56 | 166 | 210 | 344 | 3.76e-14 | 71.2 |
| Msa0960700 | AT3G61160.5 | 32.593 | 135 | 67 | 4 | 56 | 166 | 203 | 337 | 3.93e-14 | 71.2 |
| Msa0960700 | AT2G43790.1 | 26.068 | 234 | 130 | 6 | 20 | 231 | 137 | 349 | 7.34e-14 | 70.5 |
| Msa0960700 | AT4G18710.2 | 36.975 | 119 | 50 | 5 | 62 | 155 | 141 | 259 | 8.41e-14 | 69.3 |
| Msa0960700 | AT1G53510.1 | 25.424 | 236 | 126 | 7 | 24 | 230 | 102 | 316 | 1.01e-13 | 70.5 |
| Msa0960700 | AT1G18150.3 | 27.083 | 240 | 119 | 7 | 24 | 231 | 181 | 396 | 1.48e-13 | 70.1 |
| Msa0960700 | AT1G18150.2 | 27.083 | 240 | 119 | 7 | 24 | 231 | 181 | 396 | 1.48e-13 | 70.1 |
| Msa0960700 | AT1G18150.1 | 27.083 | 240 | 119 | 7 | 24 | 231 | 181 | 396 | 1.48e-13 | 70.1 |
| Msa0960700 | AT3G45640.1 | 25.105 | 239 | 126 | 7 | 26 | 236 | 117 | 330 | 2.54e-13 | 68.9 |
| Msa0960700 | AT4G26890.1 | 28.311 | 219 | 97 | 6 | 38 | 239 | 87 | 262 | 2.59e-13 | 68.9 |
| Msa0960700 | AT3G48750.1 | 24.590 | 244 | 141 | 6 | 11 | 230 | 63 | 287 | 3.20e-13 | 68.2 |
| Msa0960700 | AT3G01085.3 | 26.087 | 207 | 111 | 5 | 45 | 225 | 205 | 395 | 9.71e-13 | 67.8 |
| Msa0960700 | AT3G01085.1 | 26.087 | 207 | 111 | 5 | 45 | 225 | 205 | 395 | 9.98e-13 | 67.4 |
| Msa0960700 | AT3G01085.2 | 26.087 | 207 | 111 | 5 | 45 | 225 | 205 | 395 | 9.98e-13 | 67.4 |
| Msa0960700 | AT5G63370.9 | 31.148 | 122 | 61 | 3 | 51 | 149 | 264 | 385 | 1.39e-12 | 67.0 |
| Msa0960700 | AT5G63370.5 | 31.148 | 122 | 61 | 3 | 51 | 149 | 398 | 519 | 1.78e-12 | 66.6 |
| Msa0960700 | AT5G63370.10 | 31.148 | 122 | 61 | 3 | 51 | 149 | 398 | 519 | 1.78e-12 | 66.6 |
| Msa0960700 | AT1G18040.1 | 22.650 | 234 | 137 | 6 | 21 | 231 | 81 | 293 | 2.95e-12 | 65.9 |
| Msa0960700 | AT1G08650.1 | 25.743 | 202 | 88 | 5 | 51 | 230 | 112 | 273 | 3.82e-12 | 65.1 |
| Msa0960700 | AT5G55090.1 | 26.415 | 212 | 94 | 7 | 39 | 231 | 89 | 257 | 4.45e-12 | 65.5 |
| Msa0960700 | AT1G54610.1 | 25.592 | 211 | 117 | 4 | 49 | 234 | 212 | 407 | 4.93e-12 | 65.5 |
| Msa0960700 | AT1G54610.3 | 25.592 | 211 | 117 | 4 | 49 | 234 | 212 | 407 | 4.93e-12 | 65.5 |
| Msa0960700 | AT1G54610.2 | 25.592 | 211 | 117 | 4 | 49 | 234 | 212 | 407 | 4.93e-12 | 65.5 |
| Msa0960700 | AT2G38620.3 | 30.435 | 138 | 72 | 3 | 23 | 136 | 88 | 225 | 4.95e-12 | 64.3 |
| Msa0960700 | AT2G38620.1 | 30.435 | 138 | 72 | 3 | 23 | 136 | 88 | 225 | 4.95e-12 | 64.3 |
| Msa0960700 | AT5G55090.2 | 26.415 | 212 | 94 | 7 | 39 | 231 | 151 | 319 | 5.36e-12 | 65.5 |
| Msa0960700 | AT1G01560.3 | 26.457 | 223 | 118 | 7 | 20 | 218 | 114 | 314 | 7.22e-12 | 64.7 |
| Msa0960700 | AT1G53570.5 | 30.256 | 195 | 80 | 8 | 45 | 230 | 297 | 444 | 1.19e-11 | 64.3 |
| Msa0960700 | AT1G08650.2 | 31.624 | 117 | 58 | 2 | 51 | 145 | 112 | 228 | 1.69e-11 | 63.2 |
| Msa0960700 | AT3G08720.1 | 35.106 | 94 | 40 | 1 | 60 | 132 | 244 | 337 | 4.20e-11 | 62.8 |
| Msa0960700 | AT3G08720.3 | 35.106 | 94 | 40 | 1 | 60 | 132 | 244 | 337 | 4.20e-11 | 62.8 |
| Msa0960700 | AT3G08720.4 | 35.106 | 94 | 40 | 1 | 60 | 132 | 244 | 337 | 4.20e-11 | 62.8 |
| Msa0960700 | AT3G08720.2 | 35.106 | 94 | 40 | 1 | 60 | 132 | 244 | 337 | 4.20e-11 | 62.8 |
| Msa0960700 | AT3G08730.1 | 35.106 | 94 | 40 | 1 | 60 | 132 | 238 | 331 | 5.07e-11 | 62.4 |
| Msa0960700 | AT3G08730.2 | 35.106 | 94 | 40 | 1 | 60 | 132 | 238 | 331 | 5.07e-11 | 62.4 |
Find 113 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACTATGGTTAACAATT+TGG | 0.153516 | 6_3:-80650368 | None:intergenic |
| TGTATGGATATGGTAGTAAA+TGG | 0.165446 | 6_3:+80650896 | Msa0960700:three_prime_UTR |
| TACACCATCAAGATACATTT+TGG | 0.201464 | 6_3:-80650849 | None:intergenic |
| ACGTTACTAGCTAGGGTAAT+TGG | 0.218504 | 6_3:+80649406 | Msa0960700:CDS |
| TGAATTTGATGTTCTTTATA+AGG | 0.220679 | 6_3:+80651002 | Msa0960700:three_prime_UTR |
| CTTGAAGCCGGAGAATATTT+TGG | 0.240496 | 6_3:+80648300 | Msa0960700:CDS |
| CACAAATTTAACAGAGAATC+AGG | 0.248234 | 6_3:+80647733 | Msa0960700:CDS |
| AGGGAAGTCGTTGGAATCTT+TGG | 0.262116 | 6_3:+80650463 | Msa0960700:three_prime_UTR |
| TATTGTCACTTTGTTTATAA+AGG | 0.272861 | 6_3:-80651147 | None:intergenic |
| TGCCTCAAAGATGTCTTCTT+TGG | 0.277464 | 6_3:-80649985 | None:intergenic |
| CTAAATTACATCCTTGACTA+TGG | 0.281287 | 6_3:-80650380 | None:intergenic |
| ATGGGAGCTTTATTAGGTTT+GGG | 0.283837 | 6_3:+80646728 | Msa0960700:CDS |
| GTCAATTACCATTCAATGTT+TGG | 0.292705 | 6_3:+80648234 | Msa0960700:intron |
| GATGCAGAAGGTCGCTTCTT+CGG | 0.294316 | 6_3:-80650069 | None:intergenic |
| ATGATGTAATGTTAGGCTTT+TGG | 0.299845 | 6_3:+80650414 | Msa0960700:three_prime_UTR |
| AGATTACAGATACACTAATT+TGG | 0.315401 | 6_3:-80650622 | None:intergenic |
| AGTAAATGGGTTTAAGAAAA+AGG | 0.319047 | 6_3:+80650910 | Msa0960700:three_prime_UTR |
| TGAATACTTCAAGATGATAT+TGG | 0.328889 | 6_3:-80650132 | None:intergenic |
| ATGCAGAAGGTCGCTTCTTC+GGG | 0.331076 | 6_3:-80650068 | None:intergenic |
| TATTATTATACTTACATTGC+CGG | 0.345011 | 6_3:-80648514 | None:intergenic |
| GATGGGAGCTTTATTAGGTT+TGG | 0.354419 | 6_3:+80646727 | Msa0960700:CDS |
| GCTAGCATACTTTGACCAAT+AGG | 0.356888 | 6_3:-80649439 | None:intergenic |
| CTTCACAATGCCAAGATTGC+AGG | 0.358829 | 6_3:+80647768 | Msa0960700:CDS |
| ACGTTGCCGGGGAATCGTTT+TGG | 0.362389 | 6_3:-80649387 | None:intergenic |
| ACGGCGATGGGAGCTTTATT+AGG | 0.364657 | 6_3:+80646722 | Msa0960700:CDS |
| CGTGCTCCTGAGGTTATTCT+CGG | 0.367843 | 6_3:+80648429 | Msa0960700:CDS |
| CTGCATGAAAGTTGAAACTA+TGG | 0.375690 | 6_3:+80650679 | Msa0960700:three_prime_UTR |
| CGTTACTAGCTAGGGTAATT+GGG | 0.381867 | 6_3:+80649407 | Msa0960700:CDS |
| ACTCCACAAACCTGCAATCT+TGG | 0.385584 | 6_3:-80647778 | None:intergenic |
| ATGATTTAATTAATCAACTT+AGG | 0.386664 | 6_3:-80650192 | None:intergenic |
| ACAATATATGATGTAATGTT+AGG | 0.394988 | 6_3:+80650407 | Msa0960700:three_prime_UTR |
| AAGATTGATATCTGGTCTCT+TGG | 0.415156 | 6_3:+80648468 | Msa0960700:CDS |
| ACCCTAGCTAGTAACGTTGC+CGG | 0.421257 | 6_3:-80649400 | None:intergenic |
| GTATGGATATGGTAGTAAAT+GGG | 0.424624 | 6_3:+80650897 | Msa0960700:three_prime_UTR |
| GTAACCAAAATGTATCTTGA+TGG | 0.424893 | 6_3:+80650845 | Msa0960700:three_prime_UTR |
| TAGATTGGTGTAGTTACTAC+TGG | 0.427100 | 6_3:-80650560 | None:intergenic |
| CTTCAATATTTACATAACCT+TGG | 0.431917 | 6_3:+80648262 | Msa0960700:CDS |
| TGATTTAATTAATCAACTTA+GGG | 0.432821 | 6_3:-80650191 | None:intergenic |
| AAGTGCTTCCAAACATTGAA+TGG | 0.439190 | 6_3:-80648242 | None:intergenic |
| TTTGTGAAACTCGTATAAGT+TGG | 0.444627 | 6_3:-80647716 | None:intergenic |
| CAAGATGATATTGGTTCGTA+AGG | 0.449658 | 6_3:-80650123 | None:intergenic |
| AACTTCTGAATTCATTATGC+AGG | 0.452127 | 6_3:-80650306 | None:intergenic |
| ATTGGGATCATCGGTCCTAT+TGG | 0.459571 | 6_3:+80649424 | Msa0960700:CDS |
| TTGATATGCAGGAAAGCAAC+AGG | 0.462723 | 6_3:+80649947 | Msa0960700:intron |
| ATGACAAGAAGATTGATATC+TGG | 0.463726 | 6_3:+80648460 | Msa0960700:CDS |
| TTTATTAATGCACGGAATCC+GGG | 0.468269 | 6_3:+80650705 | Msa0960700:three_prime_UTR |
| CTGGTCTCTTGGATGCATCT+TGG | 0.473461 | 6_3:+80648479 | Msa0960700:CDS |
| GTGCTGAGCGCGACGGCGAT+GGG | 0.483656 | 6_3:+80646710 | Msa0960700:CDS |
| TTAAATCAGACAGACTAGAT+TGG | 0.484473 | 6_3:-80650575 | None:intergenic |
| GATTAATTAAATCATTGAAA+GGG | 0.487467 | 6_3:+80650200 | Msa0960700:three_prime_UTR |
| TTCCAAAGAAGACATCTTTG+AGG | 0.490294 | 6_3:+80649983 | Msa0960700:CDS |
| GTCTGTCTGATTTAAATCTA+CGG | 0.494375 | 6_3:+80650583 | Msa0960700:three_prime_UTR |
| TAATCTCGGCCCTTTGTGAT+CGG | 0.494420 | 6_3:-80650652 | None:intergenic |
| TATGCTTTATGAGAGGAATC+AGG | 0.494533 | 6_3:+80649501 | Msa0960700:CDS |
| GGTCAAAGTATGCTAGCAAA+AGG | 0.496032 | 6_3:+80649445 | Msa0960700:CDS |
| CCCCGGCAACGTTACTAGCT+AGG | 0.503488 | 6_3:+80649398 | Msa0960700:CDS |
| ATTAAATCATTGAAAGGGAA+AGG | 0.506823 | 6_3:+80650205 | Msa0960700:three_prime_UTR |
| GGTGCTGAGCGCGACGGCGA+TGG | 0.507513 | 6_3:+80646709 | Msa0960700:CDS |
| TGATTAATTAAATCATTGAA+AGG | 0.509972 | 6_3:+80650199 | Msa0960700:three_prime_UTR |
| TATCATCTTGAAGTATTCAT+CGG | 0.511095 | 6_3:+80650136 | Msa0960700:exon |
| CAACGAAGTCAATGAAGCCT+TGG | 0.513679 | 6_3:-80650026 | None:intergenic |
| CTGAACCATCCGATCACAAA+GGG | 0.516512 | 6_3:+80650643 | Msa0960700:three_prime_UTR |
| ATTTAAATCTACGGTTGAGA+TGG | 0.522543 | 6_3:+80650592 | Msa0960700:three_prime_UTR |
| CCCGGCAACGTTACTAGCTA+GGG | 0.522921 | 6_3:+80649399 | Msa0960700:CDS |
| CTGAAACTCTAAAGCACCCC+TGG | 0.524226 | 6_3:+80650091 | Msa0960700:CDS |
| AATGTATCTTGATGGTGTAA+TGG | 0.525230 | 6_3:+80650853 | Msa0960700:three_prime_UTR |
| TTCGTAAGGGTATGATAACC+AGG | 0.528514 | 6_3:-80650109 | None:intergenic |
| GTTAACAATTTGGAGAGGGA+AGG | 0.530614 | 6_3:-80650358 | None:intergenic |
| CCAACAGTAGTAGTATCAAC+AGG | 0.531084 | 6_3:-80650729 | None:intergenic |
| CTCAGGAGCACGATAGGACC+TGG | 0.537644 | 6_3:-80648418 | None:intergenic |
| ATCTTTGGTTGTACATGATG+TGG | 0.541986 | 6_3:+80650478 | Msa0960700:three_prime_UTR |
| TTTCATGCAGTCATTAATCT+CGG | 0.548443 | 6_3:-80650666 | None:intergenic |
| TGGGAGCTTTATTAGGTTTG+GGG | 0.549160 | 6_3:+80646729 | Msa0960700:CDS |
| GAAAAGCAACATGGATGCAA+AGG | 0.553995 | 6_3:-80650233 | None:intergenic |
| TTTGAGGCATAGATTACCGA+TGG | 0.557764 | 6_3:+80649999 | Msa0960700:CDS |
| AATAACCTCAGGAGCACGAT+AGG | 0.565802 | 6_3:-80648424 | None:intergenic |
| CCTGTTGATACTACTACTGT+TGG | 0.569200 | 6_3:+80650729 | Msa0960700:three_prime_UTR |
| TTAACAATTTGGAGAGGGAA+GGG | 0.572127 | 6_3:-80650357 | None:intergenic |
| CTTATTCCAAAACGATTCCC+CGG | 0.574030 | 6_3:+80649381 | Msa0960700:CDS |
| CTTCGTTGCTCATTTGCTCG+AGG | 0.578087 | 6_3:+80650041 | Msa0960700:CDS |
| ATCTTGGCAGAACTTTGTAC+CGG | 0.579038 | 6_3:+80648495 | Msa0960700:CDS |
| AGTCACAATGTATTAGTCCA+AGG | 0.583347 | 6_3:-80648279 | None:intergenic |
| AATACATTGTGACTTGAAGC+CGG | 0.584972 | 6_3:+80648288 | Msa0960700:CDS |
| GTGCTCCTGAGGTTATTCTC+GGG | 0.587936 | 6_3:+80648430 | Msa0960700:CDS |
| AAGTATGCTAGCAAAAGGAC+GGG | 0.589744 | 6_3:+80649450 | Msa0960700:CDS |
| CAAATTGTTAACCATAGTCA+AGG | 0.592451 | 6_3:+80650369 | Msa0960700:three_prime_UTR |
| AAAGTATGCTAGCAAAAGGA+CGG | 0.592834 | 6_3:+80649449 | Msa0960700:CDS |
| TATGGTTAACAATTTGGAGA+GGG | 0.593239 | 6_3:-80650362 | None:intergenic |
| TTGAGGCATAGATTACCGAT+GGG | 0.601000 | 6_3:+80650000 | Msa0960700:CDS |
| GCTAGGGTAATTGGGATCAT+CGG | 0.603278 | 6_3:+80649415 | Msa0960700:CDS |
| TTTAGAGTTTCAGATGCAGA+AGG | 0.611844 | 6_3:-80650081 | None:intergenic |
| TCTTTGGTTGTACATGATGT+GGG | 0.612894 | 6_3:+80650479 | Msa0960700:three_prime_UTR |
| AAGATGATATTGGTTCGTAA+GGG | 0.614064 | 6_3:-80650122 | None:intergenic |
| TTTGATAATGAAAAGCAACA+TGG | 0.620891 | 6_3:-80650242 | None:intergenic |
| AAAATCATATGCTTTATGAG+AGG | 0.623112 | 6_3:+80649494 | Msa0960700:CDS |
| GTGATGGAAAGGGAAGTCGT+TGG | 0.623469 | 6_3:+80650454 | Msa0960700:three_prime_UTR |
| CTATGGTTAACAATTTGGAG+AGG | 0.625175 | 6_3:-80650363 | None:intergenic |
| CAGGTCCTATCGTGCTCCTG+AGG | 0.625226 | 6_3:+80648419 | Msa0960700:CDS |
| GAAAGCCCGAGAATAACCTC+AGG | 0.637971 | 6_3:-80648435 | None:intergenic |
| AGATTGGTGTAGTTACTACT+GGG | 0.644604 | 6_3:-80650559 | None:intergenic |
| AATTTAACAGAGAATCAGGA+GGG | 0.647003 | 6_3:+80647737 | Msa0960700:CDS |
| TAAAAGCTACAGCCGATGTG+AGG | 0.648020 | 6_3:+80648324 | Msa0960700:CDS |
| TCTGAACCATCCGATCACAA+AGG | 0.661126 | 6_3:+80650642 | Msa0960700:three_prime_UTR |
| TCGTAAGGGTATGATAACCA+GGG | 0.665522 | 6_3:-80650108 | None:intergenic |
| CCTAGCTAGTAACGTTGCCG+GGG | 0.670246 | 6_3:-80649398 | None:intergenic |
| ATTTAACAGAGAATCAGGAG+GGG | 0.679047 | 6_3:+80647738 | Msa0960700:CDS |
| CGTAAGGGTATGATAACCAG+GGG | 0.686121 | 6_3:-80650107 | None:intergenic |
| CAATGACCTTCACCTCACAT+CGG | 0.686191 | 6_3:-80648336 | None:intergenic |
| AAATTTAACAGAGAATCAGG+AGG | 0.694528 | 6_3:+80647736 | Msa0960700:CDS |
| GTAGTAGTATCAACAGGACC+CGG | 0.700938 | 6_3:-80650723 | None:intergenic |
| TGAGGCATAGATTACCGATG+GGG | 0.713357 | 6_3:+80650001 | Msa0960700:CDS |
| GAGGCATAGATTACCGATGG+GGG | 0.717861 | 6_3:+80650002 | Msa0960700:CDS |
| TGAATGGGGTATTTGACACG+TGG | 0.732619 | 6_3:+80650940 | Msa0960700:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAATTTGAAAATGATT+TGG | + | chr6_3:80648967-80648986 | Msa0960700:intron | 10.0% |
| !! | TTTAAATTTGAAAATGATTT+GGG | + | chr6_3:80648968-80648987 | Msa0960700:intron | 10.0% |
| !! | ATGATTTAGAAATTTGAATT+GGG | + | chr6_3:80647064-80647083 | Msa0960700:intron | 15.0% |
| !!! | GTTGTTTTTATAAGTTATAT+TGG | + | chr6_3:80647224-80647243 | Msa0960700:intron | 15.0% |
| !! | TAAATAAGAGTTTAAATGAA+GGG | + | chr6_3:80648093-80648112 | Msa0960700:intron | 15.0% |
| !!! | ATTTATATTCTACATTTTTG+AGG | + | chr6_3:80648827-80648846 | Msa0960700:intron | 15.0% |
| !!! | AGTCAATTTTAGAAATTTTA+GGG | - | chr6_3:80649565-80649584 | None:intergenic | 15.0% |
| !! | TGATTTAATTAATCAACTTA+GGG | - | chr6_3:80650194-80650213 | None:intergenic | 15.0% |
| !! | ATGATTTAATTAATCAACTT+AGG | - | chr6_3:80650195-80650214 | None:intergenic | 15.0% |
| !! | TGATTAATTAAATCATTGAA+AGG | + | chr6_3:80650199-80650218 | Msa0960700:three_prime_UTR | 15.0% |
| !! | GATTAATTAAATCATTGAAA+GGG | + | chr6_3:80650200-80650219 | Msa0960700:three_prime_UTR | 15.0% |
| !!! | TCAAAATTTTAAAGATGATA+TGG | + | chr6_3:80650260-80650279 | Msa0960700:three_prime_UTR | 15.0% |
| !!! | TCATTTTGTTTATTTTTGTA+TGG | + | chr6_3:80650880-80650899 | Msa0960700:three_prime_UTR | 15.0% |
| !! | GATGATTTAGAAATTTGAAT+TGG | + | chr6_3:80647063-80647082 | Msa0960700:intron | 20.0% |
| !! | TGATTTAGAAATTTGAATTG+GGG | + | chr6_3:80647065-80647084 | Msa0960700:intron | 20.0% |
| !!! | AATAAGTTTTTAATCCAAAC+AGG | - | chr6_3:80647140-80647159 | None:intergenic | 20.0% |
| !! | AGAAGATGAAAAAAATGAAT+TGG | + | chr6_3:80647469-80647488 | Msa0960700:intron | 20.0% |
| !!! | GTTATATTTTAACAAATCCT+GGG | - | chr6_3:80647513-80647532 | None:intergenic | 20.0% |
| !!! | AGTTATATTTTAACAAATCC+TGG | - | chr6_3:80647514-80647533 | None:intergenic | 20.0% |
| !!! | TAAAATATAACTTTTCACAC+AGG | + | chr6_3:80647522-80647541 | Msa0960700:intron | 20.0% |
| !! | GTAAATAAGAGTTTAAATGA+AGG | + | chr6_3:80648092-80648111 | Msa0960700:intron | 20.0% |
| !! | TATTATTATACTTACATTGC+CGG | - | chr6_3:80648517-80648536 | None:intergenic | 20.0% |
| !! | GCTTAAGTTTGAAAAATTTA+TGG | - | chr6_3:80648567-80648586 | None:intergenic | 20.0% |
| !! | TATTGTATCACTTAATCTTA+AGG | + | chr6_3:80648768-80648787 | Msa0960700:intron | 20.0% |
| !!! | AAAATGATTTGTGACATATT+AGG | + | chr6_3:80649210-80649229 | Msa0960700:intron | 20.0% |
| !!! | ATTTTTTGTGAAGTACTTAT+AGG | - | chr6_3:80649479-80649498 | None:intergenic | 20.0% |
| !!! | CAGTCAATTTTAGAAATTTT+AGG | - | chr6_3:80649566-80649585 | None:intergenic | 20.0% |
| !! | CATTGTATGTTTAATTATCA+TGG | + | chr6_3:80649897-80649916 | Msa0960700:intron | 20.0% |
| !!! | ATTCAGAAGTTTTTATTTTG+TGG | + | chr6_3:80650318-80650337 | Msa0960700:three_prime_UTR | 20.0% |
| !!! | TTCAGAAGTTTTTATTTTGT+GGG | + | chr6_3:80650319-80650338 | Msa0960700:three_prime_UTR | 20.0% |
| !! | ACAATATATGATGTAATGTT+AGG | + | chr6_3:80650407-80650426 | Msa0960700:three_prime_UTR | 20.0% |
| !!! | CTATTTATTAGTGTTTTTCA+TGG | + | chr6_3:80650516-80650535 | Msa0960700:intron | 20.0% |
| !!! | ATTTTCCTTTTGTTTTTCTT+TGG | + | chr6_3:80650816-80650835 | Msa0960700:three_prime_UTR | 20.0% |
| !!! | TGTTTATTTTTGTATGGATA+TGG | + | chr6_3:80650886-80650905 | Msa0960700:three_prime_UTR | 20.0% |
| !! | TGAATTTGATGTTCTTTATA+AGG | + | chr6_3:80651002-80651021 | Msa0960700:three_prime_UTR | 20.0% |
| !!! | TAAATATGAATTTGAGATCT+AGG | - | chr6_3:80651097-80651116 | None:intergenic | 20.0% |
| !!! | TATTGTCACTTTGTTTATAA+AGG | - | chr6_3:80651150-80651169 | None:intergenic | 20.0% |
| !! | AAGATGATGATGATGAATTA+CGG | - | chr6_3:80646799-80646818 | None:intergenic | 25.0% |
| ! | TGAGTAATTACTGTGTAATT+AGG | + | chr6_3:80647028-80647047 | Msa0960700:intron | 25.0% |
| ! | GATTTAGAAATTTGAATTGG+GGG | + | chr6_3:80647066-80647085 | Msa0960700:intron | 25.0% |
| ! | CTATCTAGCATTAGAAATTT+AGG | + | chr6_3:80647436-80647455 | Msa0960700:intron | 25.0% |
| ! | AAGAACTGAATTACATTATG+TGG | + | chr6_3:80647559-80647578 | Msa0960700:intron | 25.0% |
| ! | TTAGGATTAGATCATATTTG+AGG | + | chr6_3:80648060-80648079 | Msa0960700:intron | 25.0% |
| ! | TAGGATTAGATCATATTTGA+GGG | + | chr6_3:80648061-80648080 | Msa0960700:intron | 25.0% |
| ! | GTTTAAATGAAGGGTAAAAT+TGG | + | chr6_3:80648102-80648121 | Msa0960700:intron | 25.0% |
| ! | CTTCAATATTTACATAACCT+TGG | + | chr6_3:80648262-80648281 | Msa0960700:CDS | 25.0% |
| !! | CTTTTAACCAAAATATTCTC+CGG | - | chr6_3:80648310-80648329 | None:intergenic | 25.0% |
| !! | GTTTTGCTCTTTAATACATT+AGG | + | chr6_3:80648636-80648655 | Msa0960700:intron | 25.0% |
| !! | CTTAATCTTAAGGAAGTTTT+TGG | + | chr6_3:80648778-80648797 | Msa0960700:intron | 25.0% |
| ! | TATTCTATCCTATTCTAACT+TGG | - | chr6_3:80648807-80648826 | None:intergenic | 25.0% |
| !!! | ATGAGTTTATGTTGTTTTAG+TGG | + | chr6_3:80649158-80649177 | Msa0960700:intron | 25.0% |
| !! | TTGTAGGGTTTTTACATTTT+TGG | + | chr6_3:80649269-80649288 | Msa0960700:intron | 25.0% |
| !! | TGTAGGGTTTTTACATTTTT+GGG | + | chr6_3:80649270-80649289 | Msa0960700:intron | 25.0% |
| ! | AAAATCATATGCTTTATGAG+AGG | + | chr6_3:80649494-80649513 | Msa0960700:CDS | 25.0% |
| ! | AGACTGTTTAAGAGAATTTA+TGG | - | chr6_3:80649809-80649828 | None:intergenic | 25.0% |
| ! | AGTATGAGCATGTTTATATT+GGG | - | chr6_3:80649870-80649889 | None:intergenic | 25.0% |
| ! | TAGTATGAGCATGTTTATAT+TGG | - | chr6_3:80649871-80649890 | None:intergenic | 25.0% |
| ! | TGAATACTTCAAGATGATAT+TGG | - | chr6_3:80650135-80650154 | None:intergenic | 25.0% |
| !! | TATCATCTTGAAGTATTCAT+CGG | + | chr6_3:80650136-80650155 | Msa0960700:exon | 25.0% |
| !!! | TTTTTCACACTTGATGATAA+TGG | + | chr6_3:80650160-80650179 | Msa0960700:three_prime_UTR | 25.0% |
| ! | ATTAAATCATTGAAAGGGAA+AGG | + | chr6_3:80650205-80650224 | Msa0960700:three_prime_UTR | 25.0% |
| !!! | TTTGATAATGAAAAGCAACA+TGG | - | chr6_3:80650245-80650264 | None:intergenic | 25.0% |
| !!! | TTCTTTATTTTGGTTTGTGA+TGG | + | chr6_3:80650438-80650457 | Msa0960700:three_prime_UTR | 25.0% |
| ! | AGATTACAGATACACTAATT+TGG | - | chr6_3:80650625-80650644 | None:intergenic | 25.0% |
| !! | TATGGACTTTTATTAATGCA+CGG | + | chr6_3:80650697-80650716 | Msa0960700:three_prime_UTR | 25.0% |
| ! | TCTAACCAAAGAAAAACAAA+AGG | - | chr6_3:80650824-80650843 | None:intergenic | 25.0% |
| !! | AGTAAATGGGTTTAAGAAAA+AGG | + | chr6_3:80650910-80650929 | Msa0960700:three_prime_UTR | 25.0% |
| ! | CTCAAATGTTCTCAAAAAAT+TGG | - | chr6_3:80650969-80650988 | None:intergenic | 25.0% |
| CCAATTAAGAATCTAAATGC+AGG | - | chr6_3:80646970-80646989 | None:intergenic | 30.0% | |
| CCTGCATTTAGATTCTTAAT+TGG | + | chr6_3:80646967-80646986 | Msa0960700:intron | 30.0% | |
| ! | GCTATTCGATGTAAAAGTTT+TGG | + | chr6_3:80647002-80647021 | Msa0960700:intron | 30.0% |
| ATTACTGTGTAATTAGGATG+AGG | + | chr6_3:80647034-80647053 | Msa0960700:intron | 30.0% | |
| TTACTGTGTAATTAGGATGA+GGG | + | chr6_3:80647035-80647054 | Msa0960700:intron | 30.0% | |
| TTATATGACGAAACTGGAAT+TGG | + | chr6_3:80647091-80647110 | Msa0960700:intron | 30.0% | |
| TATATGACGAAACTGGAATT+GGG | + | chr6_3:80647092-80647111 | Msa0960700:intron | 30.0% | |
| GAACATATGAAAACAGCTTA+TGG | - | chr6_3:80647291-80647310 | None:intergenic | 30.0% | |
| ! | ATAAGTTTCGTGAGACTTTT+TGG | - | chr6_3:80647316-80647335 | None:intergenic | 30.0% |
| ACTTATTTGAGCTTATCTTC+AGG | - | chr6_3:80647340-80647359 | None:intergenic | 30.0% | |
| AAGTCAATCCAAACTTATGT+CGG | + | chr6_3:80647356-80647375 | Msa0960700:intron | 30.0% | |
| TATGGAAGAGAATCTATTTG+TGG | + | chr6_3:80647389-80647408 | Msa0960700:intron | 30.0% | |
| TCTAGCATTAGAAATTTAGG+AGG | + | chr6_3:80647439-80647458 | Msa0960700:intron | 30.0% | |
| TTTGTGAAACTCGTATAAGT+TGG | - | chr6_3:80647719-80647738 | None:intergenic | 30.0% | |
| CACAAATTTAACAGAGAATC+AGG | + | chr6_3:80647733-80647752 | Msa0960700:CDS | 30.0% | |
| AAATTTAACAGAGAATCAGG+AGG | + | chr6_3:80647736-80647755 | Msa0960700:CDS | 30.0% | |
| AATTTAACAGAGAATCAGGA+GGG | + | chr6_3:80647737-80647756 | Msa0960700:CDS | 30.0% | |
| ! | TCTATTAGAGAAAAGCATAC+AGG | - | chr6_3:80647863-80647882 | None:intergenic | 30.0% |
| ! | TGTATGCTTTTCTCTAATAG+AGG | + | chr6_3:80647862-80647881 | Msa0960700:intron | 30.0% |
| AGGATTAGATCATATTTGAG+GGG | + | chr6_3:80648062-80648081 | Msa0960700:intron | 30.0% | |
| TCAGTATTCCCTTTATATAC+AGG | + | chr6_3:80648147-80648166 | Msa0960700:intron | 30.0% | |
| TATCGATGCCTGTATATAAA+GGG | - | chr6_3:80648158-80648177 | None:intergenic | 30.0% | |
| GTCAATTACCATTCAATGTT+TGG | + | chr6_3:80648234-80648253 | Msa0960700:intron | 30.0% | |
| ATGACAAGAAGATTGATATC+TGG | + | chr6_3:80648460-80648479 | Msa0960700:CDS | 30.0% | |
| CAAATACCACTTACACAAAT+TGG | - | chr6_3:80648735-80648754 | None:intergenic | 30.0% | |
| GAACACGAATGGAATTAAAT+GGG | - | chr6_3:80648914-80648933 | None:intergenic | 30.0% | |
| ! | AGTTTATTTCAGGTAGTGTT+TGG | - | chr6_3:80648936-80648955 | None:intergenic | 30.0% |
| ACACTTCATCAGTTTATTTC+AGG | - | chr6_3:80648946-80648965 | None:intergenic | 30.0% | |
| TTGTCAATCGCAATAAATAG+TGG | - | chr6_3:80649133-80649152 | None:intergenic | 30.0% | |
| TTATATGTTCTTGCAGTTGT+AGG | + | chr6_3:80649253-80649272 | Msa0960700:intron | 30.0% | |
| TATATGTTCTTGCAGTTGTA+GGG | + | chr6_3:80649254-80649273 | Msa0960700:intron | 30.0% | |
| !!! | TTTACATTTTTGGGTGAAAG+CGG | + | chr6_3:80649279-80649298 | Msa0960700:intron | 30.0% |
| GTAATTACCATAAACTCTCT+AGG | - | chr6_3:80649751-80649770 | None:intergenic | 30.0% | |
| CATGGAAAAATTATTCAGTG+AGG | + | chr6_3:80649915-80649934 | Msa0960700:intron | 30.0% | |
| !! | AAGATGATATTGGTTCGTAA+GGG | - | chr6_3:80650125-80650144 | None:intergenic | 30.0% |
| AACTTCTGAATTCATTATGC+AGG | - | chr6_3:80650309-80650328 | None:intergenic | 30.0% | |
| TATGGTTAACAATTTGGAGA+GGG | - | chr6_3:80650365-80650384 | None:intergenic | 30.0% | |
| CTTGACTATGGTTAACAATT+TGG | - | chr6_3:80650371-80650390 | None:intergenic | 30.0% | |
| CAAATTGTTAACCATAGTCA+AGG | + | chr6_3:80650369-80650388 | Msa0960700:three_prime_UTR | 30.0% | |
| CTAAATTACATCCTTGACTA+TGG | - | chr6_3:80650383-80650402 | None:intergenic | 30.0% | |
| ! | ATGATGTAATGTTAGGCTTT+TGG | + | chr6_3:80650414-80650433 | Msa0960700:three_prime_UTR | 30.0% |
| !!! | GGCTTTTGGTTTCTTTATTT+TGG | + | chr6_3:80650428-80650447 | Msa0960700:three_prime_UTR | 30.0% |
| !!! | TATTTTGGTTTGTGATGGAA+AGG | + | chr6_3:80650443-80650462 | Msa0960700:three_prime_UTR | 30.0% |
| !!! | ATTTTGGTTTGTGATGGAAA+GGG | + | chr6_3:80650444-80650463 | Msa0960700:three_prime_UTR | 30.0% |
| !!! | TGTTTTTCATGGAGTTGATA+TGG | + | chr6_3:80650527-80650546 | Msa0960700:intron | 30.0% |
| TTAAATCAGACAGACTAGAT+TGG | - | chr6_3:80650578-80650597 | None:intergenic | 30.0% | |
| GTCTGTCTGATTTAAATCTA+CGG | + | chr6_3:80650583-80650602 | Msa0960700:three_prime_UTR | 30.0% | |
| ATTTAAATCTACGGTTGAGA+TGG | + | chr6_3:80650592-80650611 | Msa0960700:three_prime_UTR | 30.0% | |
| TTTCATGCAGTCATTAATCT+CGG | - | chr6_3:80650669-80650688 | None:intergenic | 30.0% | |
| ! | TTTTATTAATGCACGGAATC+CGG | + | chr6_3:80650704-80650723 | Msa0960700:three_prime_UTR | 30.0% |
| GTAACCAAAATGTATCTTGA+TGG | + | chr6_3:80650845-80650864 | Msa0960700:three_prime_UTR | 30.0% | |
| ! | TACACCATCAAGATACATTT+TGG | - | chr6_3:80650852-80650871 | None:intergenic | 30.0% |
| !! | AATGTATCTTGATGGTGTAA+TGG | + | chr6_3:80650853-80650872 | Msa0960700:three_prime_UTR | 30.0% |
| TGTATGGATATGGTAGTAAA+TGG | + | chr6_3:80650896-80650915 | Msa0960700:three_prime_UTR | 30.0% | |
| GTATGGATATGGTAGTAAAT+GGG | + | chr6_3:80650897-80650916 | Msa0960700:three_prime_UTR | 30.0% | |
| ! | AAATGGGTTTAAGAAAAAGG+TGG | + | chr6_3:80650913-80650932 | Msa0960700:three_prime_UTR | 30.0% |
| !! | ATGGGAGCTTTATTAGGTTT+GGG | + | chr6_3:80646728-80646747 | Msa0960700:CDS | 35.0% |
| TGTAATTAGGATGAGGGTTT+AGG | + | chr6_3:80647041-80647060 | Msa0960700:intron | 35.0% | |
| AGTCAATCCAAACTTATGTC+GGG | + | chr6_3:80647357-80647376 | Msa0960700:intron | 35.0% | |
| CTATTTGTGGAATCAAGCAA+TGG | + | chr6_3:80647402-80647421 | Msa0960700:intron | 35.0% | |
| ATTTAACAGAGAATCAGGAG+GGG | + | chr6_3:80647738-80647757 | Msa0960700:CDS | 35.0% | |
| TATCTACAACTAGCATGCAA+TGG | + | chr6_3:80647822-80647841 | Msa0960700:intron | 35.0% | |
| AGAAATCAAGCTTCAAGCTT+TGG | + | chr6_3:80647902-80647921 | Msa0960700:intron | 35.0% | |
| CTATCGATGCCTGTATATAA+AGG | - | chr6_3:80648159-80648178 | None:intergenic | 35.0% | |
| ! | TGTAATGTTTGAAGTGTGAC+AGG | - | chr6_3:80648190-80648209 | None:intergenic | 35.0% |
| AAGTGCTTCCAAACATTGAA+TGG | - | chr6_3:80648245-80648264 | None:intergenic | 35.0% | |
| AGTCACAATGTATTAGTCCA+AGG | - | chr6_3:80648282-80648301 | None:intergenic | 35.0% | |
| AATACATTGTGACTTGAAGC+CGG | + | chr6_3:80648288-80648307 | Msa0960700:CDS | 35.0% | |
| TGGACTGAATATATGAGCAA+AGG | - | chr6_3:80648401-80648420 | None:intergenic | 35.0% | |
| TTTGCTCATATATTCAGTCC+AGG | + | chr6_3:80648400-80648419 | Msa0960700:intron | 35.0% | |
| AAGATTGATATCTGGTCTCT+TGG | + | chr6_3:80648468-80648487 | Msa0960700:CDS | 35.0% | |
| ! | GGATCAAGCAGTAAATTTTG+CGG | - | chr6_3:80648671-80648690 | None:intergenic | 35.0% |
| TAGATGCCAATTTGTGTAAG+TGG | + | chr6_3:80648726-80648745 | Msa0960700:intron | 35.0% | |
| ! | TTTGGTAGCCAAGTTAGAAT+AGG | + | chr6_3:80648796-80648815 | Msa0960700:intron | 35.0% |
| GGAACACGAATGGAATTAAA+TGG | - | chr6_3:80648915-80648934 | None:intergenic | 35.0% | |
| TTGTCAAATAGTTGCTCTAG+TGG | + | chr6_3:80649071-80649090 | Msa0960700:intron | 35.0% | |
| AAAGTATGCTAGCAAAAGGA+CGG | + | chr6_3:80649449-80649468 | Msa0960700:CDS | 35.0% | |
| TATGCTTTATGAGAGGAATC+AGG | + | chr6_3:80649501-80649520 | Msa0960700:CDS | 35.0% | |
| !! | TCGCTTGTATTTGCTATGTT+TGG | + | chr6_3:80649593-80649612 | Msa0960700:intron | 35.0% |
| TTGCAATCCTAGAGAGTTTA+TGG | + | chr6_3:80649741-80649760 | Msa0960700:intron | 35.0% | |
| TTCCAAAGAAGACATCTTTG+AGG | + | chr6_3:80649983-80650002 | Msa0960700:CDS | 35.0% | |
| ! | TTTAGAGTTTCAGATGCAGA+AGG | - | chr6_3:80650084-80650103 | None:intergenic | 35.0% |
| !! | CAAGATGATATTGGTTCGTA+AGG | - | chr6_3:80650126-80650145 | None:intergenic | 35.0% |
| TTAACAATTTGGAGAGGGAA+GGG | - | chr6_3:80650360-80650379 | None:intergenic | 35.0% | |
| CTATGGTTAACAATTTGGAG+AGG | - | chr6_3:80650366-80650385 | None:intergenic | 35.0% | |
| ATCTTTGGTTGTACATGATG+TGG | + | chr6_3:80650478-80650497 | Msa0960700:three_prime_UTR | 35.0% | |
| TCTTTGGTTGTACATGATGT+GGG | + | chr6_3:80650479-80650498 | Msa0960700:three_prime_UTR | 35.0% | |
| !! | TCATGGAGTTGATATGGAAA+TGG | + | chr6_3:80650533-80650552 | Msa0960700:intron | 35.0% |
| AGATTGGTGTAGTTACTACT+GGG | - | chr6_3:80650562-80650581 | None:intergenic | 35.0% | |
| TAGATTGGTGTAGTTACTAC+TGG | - | chr6_3:80650563-80650582 | None:intergenic | 35.0% | |
| CTGCATGAAAGTTGAAACTA+TGG | + | chr6_3:80650679-80650698 | Msa0960700:three_prime_UTR | 35.0% | |
| TTTATTAATGCACGGAATCC+GGG | + | chr6_3:80650705-80650724 | Msa0960700:three_prime_UTR | 35.0% | |
| AGAAAAAGGTGGTATGTGAA+TGG | + | chr6_3:80650924-80650943 | Msa0960700:three_prime_UTR | 35.0% | |
| GAAAAAGGTGGTATGTGAAT+GGG | + | chr6_3:80650925-80650944 | Msa0960700:three_prime_UTR | 35.0% | |
| AAAAAGGTGGTATGTGAATG+GGG | + | chr6_3:80650926-80650945 | Msa0960700:three_prime_UTR | 35.0% | |
| TGAGATCTAGGTAACAGTTA+GGG | - | chr6_3:80651085-80651104 | None:intergenic | 35.0% | |
| TTGAGATCTAGGTAACAGTT+AGG | - | chr6_3:80651086-80651105 | None:intergenic | 35.0% | |
| !! | GATGGGAGCTTTATTAGGTT+TGG | + | chr6_3:80646727-80646746 | Msa0960700:CDS | 40.0% |
| !! | TGGGAGCTTTATTAGGTTTG+GGG | + | chr6_3:80646729-80646748 | Msa0960700:CDS | 40.0% |
| AGATGTACTTCAACGTACTC+CGG | + | chr6_3:80646756-80646775 | Msa0960700:intron | 40.0% | |
| TTACGATTGTGTTAGATCCG+TGG | + | chr6_3:80646879-80646898 | Msa0960700:intron | 40.0% | |
| TACGATTGTGTTAGATCCGT+GGG | + | chr6_3:80646880-80646899 | Msa0960700:intron | 40.0% | |
| !! | CATGTGTTGGTAATGGGATT+GGG | + | chr6_3:80646905-80646924 | Msa0960700:intron | 40.0% |
| GTTTGGTTGATTGTGCATCA+GGG | + | chr6_3:80647114-80647133 | Msa0960700:intron | 40.0% | |
| CTTATCTCCCGACATAAGTT+TGG | - | chr6_3:80647367-80647386 | None:intergenic | 40.0% | |
| TATGTCGGGAGATAAGCTTA+TGG | + | chr6_3:80647371-80647390 | Msa0960700:intron | 40.0% | |
| AAATGAATTGGCTGCTAAGC+TGG | + | chr6_3:80647481-80647500 | Msa0960700:intron | 40.0% | |
| TCTCTAATAGAGGCCATAGT+CGG | + | chr6_3:80647872-80647891 | Msa0960700:intron | 40.0% | |
| TTGAAGCTTGATTTCTGTGG+AGG | - | chr6_3:80647898-80647917 | None:intergenic | 40.0% | |
| AGCTTGAAGCTTGATTTCTG+TGG | - | chr6_3:80647901-80647920 | None:intergenic | 40.0% | |
| ! | CTTGAAGCCGGAGAATATTT+TGG | + | chr6_3:80648300-80648319 | Msa0960700:CDS | 40.0% |
| ATCTTGGCAGAACTTTGTAC+CGG | + | chr6_3:80648495-80648514 | Msa0960700:CDS | 40.0% | |
| ! | CACGTCTATTTTCGTGTTAG+AGG | + | chr6_3:80648595-80648614 | Msa0960700:intron | 40.0% |
| !! | CTTGATTCGTGTTTTTCCTC+CGG | + | chr6_3:80648690-80648709 | Msa0960700:intron | 40.0% |
| CATCTAAACAATGCCATCAC+CGG | - | chr6_3:80648712-80648731 | None:intergenic | 40.0% | |
| CTTATTCCAAAACGATTCCC+CGG | + | chr6_3:80649381-80649400 | Msa0960700:CDS | 40.0% | |
| ACGTTACTAGCTAGGGTAAT+TGG | + | chr6_3:80649406-80649425 | Msa0960700:CDS | 40.0% | |
| CGTTACTAGCTAGGGTAATT+GGG | + | chr6_3:80649407-80649426 | Msa0960700:CDS | 40.0% | |
| GCTAGCATACTTTGACCAAT+AGG | - | chr6_3:80649442-80649461 | None:intergenic | 40.0% | |
| GGTCAAAGTATGCTAGCAAA+AGG | + | chr6_3:80649445-80649464 | Msa0960700:CDS | 40.0% | |
| AAGTATGCTAGCAAAAGGAC+GGG | + | chr6_3:80649450-80649469 | Msa0960700:CDS | 40.0% | |
| ! | GGCATTGTGTATTGATATGC+AGG | + | chr6_3:80649936-80649955 | Msa0960700:intron | 40.0% |
| TTGATATGCAGGAAAGCAAC+AGG | + | chr6_3:80649947-80649966 | Msa0960700:intron | 40.0% | |
| TGCCTCAAAGATGTCTTCTT+TGG | - | chr6_3:80649988-80650007 | None:intergenic | 40.0% | |
| ! | TTTGAGGCATAGATTACCGA+TGG | + | chr6_3:80649999-80650018 | Msa0960700:CDS | 40.0% |
| TTGAGGCATAGATTACCGAT+GGG | + | chr6_3:80650000-80650019 | Msa0960700:CDS | 40.0% | |
| ! | TCGTAAGGGTATGATAACCA+GGG | - | chr6_3:80650111-80650130 | None:intergenic | 40.0% |
| ! | TTCGTAAGGGTATGATAACC+AGG | - | chr6_3:80650112-80650131 | None:intergenic | 40.0% |
| GAAAAGCAACATGGATGCAA+AGG | - | chr6_3:80650236-80650255 | None:intergenic | 40.0% | |
| GTTAACAATTTGGAGAGGGA+AGG | - | chr6_3:80650361-80650380 | None:intergenic | 40.0% | |
| CCAACAGTAGTAGTATCAAC+AGG | - | chr6_3:80650732-80650751 | None:intergenic | 40.0% | |
| CCTGTTGATACTACTACTGT+TGG | + | chr6_3:80650729-80650748 | Msa0960700:three_prime_UTR | 40.0% | |
| TAGGTAACAGTTAGGGTTAG+TGG | - | chr6_3:80651078-80651097 | None:intergenic | 40.0% | |
| ATGAATTACGGCGCATGTAG+GGG | - | chr6_3:80646787-80646806 | None:intergenic | 45.0% | |
| GATGAATTACGGCGCATGTA+GGG | - | chr6_3:80646788-80646807 | None:intergenic | 45.0% | |
| TGATGAATTACGGCGCATGT+AGG | - | chr6_3:80646789-80646808 | None:intergenic | 45.0% | |
| ATTACCAACACATGCTCCCA+CGG | - | chr6_3:80646899-80646918 | None:intergenic | 45.0% | |
| !! | TGGGAGCATGTGTTGGTAAT+GGG | + | chr6_3:80646899-80646918 | Msa0960700:intron | 45.0% |
| !! | GCATGTGTTGGTAATGGGAT+TGG | + | chr6_3:80646904-80646923 | Msa0960700:intron | 45.0% |
| AATGGGATTGGGCGTTACAT+TGG | + | chr6_3:80646916-80646935 | Msa0960700:intron | 45.0% | |
| ! | GGGGTGTTATATGACGAAAC+TGG | + | chr6_3:80647085-80647104 | Msa0960700:intron | 45.0% |
| GACGAAACTGGAATTGGGTT+TGG | + | chr6_3:80647097-80647116 | Msa0960700:intron | 45.0% | |
| ! | GGTTTGGTTGATTGTGCATC+AGG | + | chr6_3:80647113-80647132 | Msa0960700:intron | 45.0% |
| ATGTTCCTGCAGTGCAACAA+CGG | - | chr6_3:80647668-80647687 | None:intergenic | 45.0% | |
| CTTCACAATGCCAAGATTGC+AGG | + | chr6_3:80647768-80647787 | Msa0960700:CDS | 45.0% | |
| ATGCCAAGATTGCAGGTTTG+TGG | + | chr6_3:80647775-80647794 | Msa0960700:intron | 45.0% | |
| ACTCCACAAACCTGCAATCT+TGG | - | chr6_3:80647781-80647800 | None:intergenic | 45.0% | |
| TAAAAGCTACAGCCGATGTG+AGG | + | chr6_3:80648324-80648343 | Msa0960700:CDS | 45.0% | |
| CAATGACCTTCACCTCACAT+CGG | - | chr6_3:80648339-80648358 | None:intergenic | 45.0% | |
| GAGGTGAAGGTCATTGATCT+TGG | + | chr6_3:80648343-80648362 | Msa0960700:intron | 45.0% | |
| ! | AATAACCTCAGGAGCACGAT+AGG | - | chr6_3:80648427-80648446 | None:intergenic | 45.0% |
| CGGAGGAAAAACACGAATCA+AGG | - | chr6_3:80648692-80648711 | None:intergenic | 45.0% | |
| ! | GGTAGTGTTTGGAACACGAA+TGG | - | chr6_3:80648925-80648944 | None:intergenic | 45.0% |
| GAACTGCTGTGTAGCAGAAT+CGG | + | chr6_3:80649101-80649120 | Msa0960700:intron | 45.0% | |
| GCTAGGGTAATTGGGATCAT+CGG | + | chr6_3:80649415-80649434 | Msa0960700:CDS | 45.0% | |
| ATTGGGATCATCGGTCCTAT+TGG | + | chr6_3:80649424-80649443 | Msa0960700:CDS | 45.0% | |
| TGAGGCATAGATTACCGATG+GGG | + | chr6_3:80650001-80650020 | Msa0960700:CDS | 45.0% | |
| CAACGAAGTCAATGAAGCCT+TGG | - | chr6_3:80650029-80650048 | None:intergenic | 45.0% | |
| ! | CGTAAGGGTATGATAACCAG+GGG | - | chr6_3:80650110-80650129 | None:intergenic | 45.0% |
| AGGGAAGTCGTTGGAATCTT+TGG | + | chr6_3:80650463-80650482 | Msa0960700:three_prime_UTR | 45.0% | |
| TCTGAACCATCCGATCACAA+AGG | + | chr6_3:80650642-80650661 | Msa0960700:three_prime_UTR | 45.0% | |
| CTGAACCATCCGATCACAAA+GGG | + | chr6_3:80650643-80650662 | Msa0960700:three_prime_UTR | 45.0% | |
| TAATCTCGGCCCTTTGTGAT+CGG | - | chr6_3:80650655-80650674 | None:intergenic | 45.0% | |
| GTAGTAGTATCAACAGGACC+CGG | - | chr6_3:80650726-80650745 | None:intergenic | 45.0% | |
| ! | TGAATGGGGTATTTGACACG+TGG | + | chr6_3:80650940-80650959 | Msa0960700:three_prime_UTR | 45.0% |
| GCTATGAAACGATGGAGTGA+TGG | - | chr6_3:80651053-80651072 | None:intergenic | 45.0% | |
| TAGTGGCAGCTATGAAACGA+TGG | - | chr6_3:80651061-80651080 | None:intergenic | 45.0% | |
| !!! | AATTGATTTAAAATTATATT+AGG | + | chr6_3:80648042-80648061 | Msa0960700:intron | 5.0% |
| !! | ACGGCGATGGGAGCTTTATT+AGG | + | chr6_3:80646722-80646741 | Msa0960700:CDS | 50.0% |
| ! | GTGGGAGCATGTGTTGGTAA+TGG | + | chr6_3:80646898-80646917 | Msa0960700:intron | 50.0% |
| ATTGTGCATCAGGGCCTGTT+TGG | + | chr6_3:80647123-80647142 | Msa0960700:intron | 50.0% | |
| ATTTCTGTGGAGGCCGACTA+TGG | - | chr6_3:80647888-80647907 | None:intergenic | 50.0% | |
| CGTGCTCCTGAGGTTATTCT+CGG | + | chr6_3:80648429-80648448 | Msa0960700:CDS | 50.0% | |
| GTGCTCCTGAGGTTATTCTC+GGG | + | chr6_3:80648430-80648449 | Msa0960700:CDS | 50.0% | |
| GAAAGCCCGAGAATAACCTC+AGG | - | chr6_3:80648438-80648457 | None:intergenic | 50.0% | |
| CTGGTCTCTTGGATGCATCT+TGG | + | chr6_3:80648479-80648498 | Msa0960700:CDS | 50.0% | |
| ! | TCGTGTTTTTCCTCCGGTGA+TGG | + | chr6_3:80648696-80648715 | Msa0960700:intron | 50.0% |
| CTAAACAATGCCATCACCGG+AGG | - | chr6_3:80648709-80648728 | None:intergenic | 50.0% | |
| ACCCTAGCTAGTAACGTTGC+CGG | - | chr6_3:80649403-80649422 | None:intergenic | 50.0% | |
| GAGGCATAGATTACCGATGG+GGG | + | chr6_3:80650002-80650021 | Msa0960700:CDS | 50.0% | |
| CTTCGTTGCTCATTTGCTCG+AGG | + | chr6_3:80650041-80650060 | Msa0960700:CDS | 50.0% | |
| ATGCAGAAGGTCGCTTCTTC+GGG | - | chr6_3:80650071-80650090 | None:intergenic | 50.0% | |
| GATGCAGAAGGTCGCTTCTT+CGG | - | chr6_3:80650072-80650091 | None:intergenic | 50.0% | |
| !! | CTGAAACTCTAAAGCACCCC+TGG | + | chr6_3:80650091-80650110 | Msa0960700:CDS | 50.0% |
| ! | GTGATGGAAAGGGAAGTCGT+TGG | + | chr6_3:80650454-80650473 | Msa0960700:three_prime_UTR | 50.0% |
| ! | AGATCCGTGGGAGCATGTGT+TGG | + | chr6_3:80646892-80646911 | Msa0960700:intron | 55.0% |
| CCTGCAGTGCAACAACGGAA+AGG | - | chr6_3:80647663-80647682 | None:intergenic | 55.0% | |
| CCTTTCCGTTGTTGCACTGC+AGG | + | chr6_3:80647660-80647679 | Msa0960700:intron | 55.0% | |
| GCATGCAATGGACACTGACG+TGG | + | chr6_3:80647834-80647853 | Msa0960700:intron | 55.0% | |
| TGCAATGGACACTGACGTGG+CGG | + | chr6_3:80647837-80647856 | Msa0960700:intron | 55.0% | |
| CTACAGCCGATGTGAGGTGA+AGG | + | chr6_3:80648330-80648349 | Msa0960700:intron | 55.0% | |
| ! | ACGTTGCCGGGGAATCGTTT+TGG | - | chr6_3:80649390-80649409 | None:intergenic | 55.0% |
| CCTAGCTAGTAACGTTGCCG+GGG | - | chr6_3:80649401-80649420 | None:intergenic | 55.0% | |
| CCCTAGCTAGTAACGTTGCC+GGG | - | chr6_3:80649402-80649421 | None:intergenic | 55.0% | |
| CCCGGCAACGTTACTAGCTA+GGG | + | chr6_3:80649399-80649418 | Msa0960700:CDS | 55.0% | |
| AGATTACCGATGGGGGACCA+AGG | + | chr6_3:80650009-80650028 | Msa0960700:CDS | 55.0% | |
| ATGAAGCCTTGGTCCCCCAT+CGG | - | chr6_3:80650018-80650037 | None:intergenic | 55.0% | |
| CGATGGAGTGATGGCACACA+AGG | - | chr6_3:80651044-80651063 | None:intergenic | 55.0% | |
| GGCGCATGTAGGGGAGTTTC+CGG | - | chr6_3:80646778-80646797 | None:intergenic | 60.0% | |
| TGCTAAGCTGGCAAGTGCCC+AGG | + | chr6_3:80647493-80647512 | Msa0960700:intron | 60.0% | |
| ! | CTCAGGAGCACGATAGGACC+TGG | - | chr6_3:80648421-80648440 | None:intergenic | 60.0% |
| CAGGTCCTATCGTGCTCCTG+AGG | + | chr6_3:80648419-80648438 | Msa0960700:CDS | 60.0% | |
| CCCCGGCAACGTTACTAGCT+AGG | + | chr6_3:80649398-80649417 | Msa0960700:CDS | 60.0% | |
| CTCGGCCCTTTGTGATCGGA+TGG | - | chr6_3:80650651-80650670 | None:intergenic | 60.0% | |
| GTGCTGAGCGCGACGGCGAT+GGG | + | chr6_3:80646710-80646729 | Msa0960700:CDS | 70.0% | |
| ! | GGTGCTGAGCGCGACGGCGA+TGG | + | chr6_3:80646709-80646728 | Msa0960700:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 80646707 | 80651175 | 80646707 | ID=Msa0960700;Name=Msa0960700 |
| chr6_3 | mRNA | 80646707 | 80651175 | 80646707 | ID=Msa0960700-mRNA-1;Parent=Msa0960700;Name=Msa0960700-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.71|0.62|1|0.71|0.62|8|900|239 |
| chr6_3 | exon | 80646707 | 80646769 | 80646707 | ID=Msa0960700-mRNA-1:exon:14472;Parent=Msa0960700-mRNA-1 |
| chr6_3 | exon | 80647682 | 80647789 | 80647682 | ID=Msa0960700-mRNA-1:exon:14473;Parent=Msa0960700-mRNA-1 |
| chr6_3 | exon | 80648235 | 80648345 | 80648235 | ID=Msa0960700-mRNA-1:exon:14474;Parent=Msa0960700-mRNA-1 |
| chr6_3 | exon | 80648417 | 80648521 | 80648417 | ID=Msa0960700-mRNA-1:exon:14475;Parent=Msa0960700-mRNA-1 |
| chr6_3 | exon | 80649379 | 80649522 | 80649379 | ID=Msa0960700-mRNA-1:exon:14476;Parent=Msa0960700-mRNA-1 |
| chr6_3 | exon | 80649958 | 80650510 | 80649958 | ID=Msa0960700-mRNA-1:exon:14477;Parent=Msa0960700-mRNA-1 |
| chr6_3 | exon | 80650553 | 80651044 | 80650553 | ID=Msa0960700-mRNA-1:exon:14478;Parent=Msa0960700-mRNA-1 |
| chr6_3 | exon | 80651132 | 80651175 | 80651132 | ID=Msa0960700-mRNA-1:exon:14479;Parent=Msa0960700-mRNA-1 |
| chr6_3 | CDS | 80646707 | 80646769 | 80646707 | ID=Msa0960700-mRNA-1:cds;Parent=Msa0960700-mRNA-1 |
| chr6_3 | CDS | 80647682 | 80647789 | 80647682 | ID=Msa0960700-mRNA-1:cds;Parent=Msa0960700-mRNA-1 |
| chr6_3 | CDS | 80648235 | 80648345 | 80648235 | ID=Msa0960700-mRNA-1:cds;Parent=Msa0960700-mRNA-1 |
| chr6_3 | CDS | 80648417 | 80648521 | 80648417 | ID=Msa0960700-mRNA-1:cds;Parent=Msa0960700-mRNA-1 |
| chr6_3 | CDS | 80649379 | 80649522 | 80649379 | ID=Msa0960700-mRNA-1:cds;Parent=Msa0960700-mRNA-1 |
| chr6_3 | CDS | 80649958 | 80650146 | 80649958 | ID=Msa0960700-mRNA-1:cds;Parent=Msa0960700-mRNA-1 |
| chr6_3 | three_prime_UTR | 80650147 | 80650510 | 80650147 | ID=Msa0960700-mRNA-1:three_prime_utr;Parent=Msa0960700-mRNA-1 |
| chr6_3 | three_prime_UTR | 80650553 | 80651044 | 80650553 | ID=Msa0960700-mRNA-1:three_prime_utr;Parent=Msa0960700-mRNA-1 |
| chr6_3 | three_prime_UTR | 80651132 | 80651175 | 80651132 | ID=Msa0960700-mRNA-1:three_prime_utr;Parent=Msa0960700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
