Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961470 | KEH26825.1 | 70.226 | 665 | 48 | 7 | 6 | 520 | 1 | 665 | 0.0 | 866 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961470 | sp|Q9LD37|CNG20_ARATH | 38.063 | 599 | 231 | 11 | 61 | 523 | 168 | 762 | 4.34e-114 | 358 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961470 | A0A072ULX3 | 70.226 | 665 | 48 | 7 | 6 | 520 | 1 | 665 | 0.0 | 866 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0961470 | Msa0996140 | 0.804705 | 1.899743e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961470 | MtrunA17_Chr6g0480681 | 49.162 | 716 | 168 | 13 | 6 | 527 | 1 | 714 | 0.0 | 590 |
Msa0961470 | MtrunA17_Chr6g0480741 | 49.927 | 685 | 170 | 13 | 6 | 520 | 1 | 682 | 0.0 | 561 |
Msa0961470 | MtrunA17_Chr6g0480781 | 52.736 | 603 | 144 | 11 | 61 | 525 | 145 | 744 | 0.0 | 556 |
Msa0961470 | MtrunA17_Chr6g0480781 | 48.148 | 81 | 39 | 1 | 6 | 83 | 1 | 81 | 3.44e-13 | 72.4 |
Msa0961470 | MtrunA17_Chr6g0480851 | 52.318 | 604 | 147 | 11 | 61 | 526 | 160 | 760 | 0.0 | 548 |
Msa0961470 | MtrunA17_Chr6g0480851 | 62.121 | 66 | 16 | 2 | 6 | 62 | 1 | 66 | 1.54e-14 | 76.6 |
Msa0961470 | MtrunA17_Chr6g0481021 | 45.349 | 602 | 186 | 11 | 52 | 511 | 89 | 689 | 2.89e-153 | 454 |
Msa0961470 | MtrunA17_Chr6g0480771 | 80.370 | 270 | 18 | 2 | 294 | 528 | 1 | 270 | 4.50e-142 | 411 |
Msa0961470 | MtrunA17_Chr5g0395421 | 59.167 | 360 | 87 | 7 | 189 | 495 | 11 | 363 | 5.38e-127 | 376 |
Msa0961470 | MtrunA17_Chr6g0480671 | 40.820 | 610 | 215 | 13 | 57 | 525 | 164 | 768 | 2.76e-124 | 382 |
Msa0961470 | MtrunA17_Chr6g0480841 | 73.558 | 208 | 46 | 1 | 330 | 528 | 2 | 209 | 2.62e-104 | 311 |
Msa0961470 | MtrunA17_Chr6g0480751 | 62.150 | 214 | 17 | 2 | 6 | 155 | 1 | 214 | 1.70e-80 | 251 |
Msa0961470 | MtrunA17_Chr6g0480761 | 78.523 | 149 | 20 | 1 | 146 | 282 | 18 | 166 | 3.95e-76 | 239 |
Msa0961470 | MtrunA17_Chr4g0001481 | 30.435 | 506 | 236 | 13 | 106 | 508 | 168 | 660 | 2.39e-53 | 192 |
Msa0961470 | MtrunA17_Chr3g0139071 | 30.159 | 504 | 243 | 15 | 106 | 511 | 144 | 636 | 3.71e-51 | 186 |
Msa0961470 | MtrunA17_Chr4g0073941 | 29.862 | 509 | 238 | 16 | 106 | 511 | 166 | 658 | 4.67e-49 | 180 |
Msa0961470 | MtrunA17_Chr2g0305771 | 29.666 | 509 | 241 | 18 | 108 | 514 | 116 | 609 | 3.52e-47 | 174 |
Msa0961470 | MtrunA17_Chr7g0228181 | 26.454 | 533 | 272 | 14 | 86 | 511 | 87 | 606 | 1.10e-44 | 167 |
Msa0961470 | MtrunA17_Chr3g0125651 | 28.161 | 522 | 246 | 15 | 100 | 511 | 96 | 598 | 7.26e-41 | 156 |
Msa0961470 | MtrunA17_Chr2g0326871 | 25.614 | 570 | 267 | 16 | 85 | 511 | 77 | 632 | 1.26e-40 | 156 |
Msa0961470 | MtrunA17_Chr1g0158861 | 25.389 | 579 | 259 | 18 | 84 | 511 | 82 | 638 | 1.64e-40 | 155 |
Msa0961470 | MtrunA17_Chr6g0480821 | 59.286 | 140 | 42 | 4 | 155 | 282 | 54 | 190 | 1.68e-40 | 145 |
Msa0961470 | MtrunA17_Chr3g0126541 | 25.126 | 597 | 279 | 17 | 68 | 511 | 55 | 636 | 2.50e-40 | 155 |
Msa0961470 | MtrunA17_Chr5g0395411 | 41.546 | 207 | 57 | 3 | 59 | 202 | 146 | 351 | 2.75e-40 | 149 |
Msa0961470 | MtrunA17_Chr1g0181121 | 27.470 | 506 | 257 | 12 | 103 | 511 | 107 | 599 | 5.84e-39 | 151 |
Msa0961470 | MtrunA17_Chr7g0275581 | 24.744 | 586 | 272 | 18 | 84 | 519 | 82 | 648 | 1.03e-38 | 150 |
Msa0961470 | MtrunA17_Chr4g0028861 | 24.558 | 566 | 270 | 15 | 85 | 507 | 124 | 675 | 2.91e-37 | 146 |
Msa0961470 | MtrunA17_Chr8g0360821 | 28.195 | 493 | 233 | 20 | 129 | 514 | 151 | 629 | 5.40e-35 | 139 |
Msa0961470 | MtrunA17_Chr2g0318561 | 28.500 | 400 | 206 | 14 | 184 | 514 | 64 | 452 | 1.61e-30 | 124 |
Msa0961470 | MtrunA17_Chr8g0347121 | 23.387 | 620 | 276 | 19 | 76 | 515 | 56 | 656 | 2.69e-30 | 125 |
Msa0961470 | MtrunA17_Chr7g0218341 | 27.202 | 511 | 254 | 21 | 106 | 511 | 177 | 674 | 4.84e-30 | 124 |
Msa0961470 | MtrunA17_Chr6g0480791 | 40.972 | 144 | 38 | 2 | 59 | 155 | 146 | 289 | 1.97e-24 | 103 |
Msa0961470 | MtrunA17_Chr6g0480791 | 66.667 | 60 | 17 | 1 | 6 | 62 | 1 | 60 | 3.60e-16 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961470 | AT3G17700.1 | 38.063 | 599 | 231 | 11 | 61 | 523 | 168 | 762 | 4.41e-115 | 358 |
Msa0961470 | AT3G17690.1 | 36.215 | 613 | 248 | 12 | 47 | 522 | 120 | 726 | 1.21e-113 | 353 |
Msa0961470 | AT3G17700.2 | 36.364 | 506 | 182 | 11 | 61 | 430 | 168 | 669 | 8.14e-84 | 274 |
Msa0961470 | AT3G17690.2 | 33.656 | 517 | 202 | 11 | 47 | 426 | 120 | 632 | 1.11e-79 | 262 |
Msa0961470 | AT1G19780.1 | 32.079 | 505 | 228 | 16 | 106 | 507 | 164 | 656 | 4.02e-57 | 204 |
Msa0961470 | AT1G15990.1 | 30.648 | 509 | 238 | 15 | 106 | 511 | 158 | 654 | 3.59e-53 | 192 |
Msa0961470 | AT4G30560.5 | 31.034 | 522 | 242 | 16 | 106 | 522 | 144 | 652 | 1.49e-52 | 190 |
Msa0961470 | AT4G30560.2 | 31.034 | 522 | 242 | 16 | 106 | 522 | 144 | 652 | 1.49e-52 | 190 |
Msa0961470 | AT4G30560.3 | 31.034 | 522 | 242 | 16 | 106 | 522 | 144 | 652 | 1.49e-52 | 190 |
Msa0961470 | AT4G30560.1 | 31.034 | 522 | 242 | 16 | 106 | 522 | 170 | 678 | 1.60e-52 | 191 |
Msa0961470 | AT4G30560.4 | 31.034 | 522 | 242 | 16 | 106 | 522 | 170 | 678 | 1.60e-52 | 191 |
Msa0961470 | AT2G23980.6 | 30.137 | 511 | 238 | 15 | 106 | 511 | 143 | 639 | 8.28e-49 | 180 |
Msa0961470 | AT2G23980.9 | 30.137 | 511 | 238 | 15 | 106 | 511 | 170 | 666 | 9.50e-49 | 180 |
Msa0961470 | AT2G23980.10 | 30.137 | 511 | 238 | 15 | 106 | 511 | 170 | 666 | 9.50e-49 | 180 |
Msa0961470 | AT2G23980.1 | 30.137 | 511 | 238 | 15 | 106 | 511 | 170 | 666 | 9.50e-49 | 180 |
Msa0961470 | AT2G23980.4 | 30.137 | 511 | 238 | 15 | 106 | 511 | 170 | 666 | 9.50e-49 | 180 |
Msa0961470 | AT2G23980.5 | 30.137 | 511 | 238 | 15 | 106 | 511 | 170 | 666 | 9.50e-49 | 180 |
Msa0961470 | AT5G57940.1 | 29.982 | 547 | 245 | 19 | 85 | 511 | 122 | 650 | 2.66e-48 | 178 |
Msa0961470 | AT5G57940.2 | 29.982 | 547 | 245 | 19 | 85 | 511 | 122 | 650 | 2.66e-48 | 178 |
Msa0961470 | AT5G57940.3 | 29.982 | 547 | 245 | 19 | 85 | 511 | 115 | 643 | 2.80e-48 | 178 |
Msa0961470 | AT3G17690.3 | 30.633 | 395 | 162 | 10 | 47 | 333 | 120 | 510 | 7.20e-48 | 174 |
Msa0961470 | AT4G30360.1 | 28.932 | 515 | 252 | 17 | 106 | 519 | 140 | 641 | 1.83e-47 | 176 |
Msa0961470 | AT4G01010.1 | 28.571 | 525 | 252 | 16 | 103 | 522 | 132 | 638 | 5.16e-47 | 174 |
Msa0961470 | AT4G01010.2 | 28.571 | 525 | 252 | 16 | 103 | 522 | 132 | 638 | 5.16e-47 | 174 |
Msa0961470 | AT2G24610.1 | 29.651 | 516 | 242 | 18 | 100 | 511 | 135 | 633 | 1.00e-46 | 174 |
Msa0961470 | AT2G24610.2 | 29.651 | 516 | 242 | 18 | 100 | 511 | 150 | 648 | 1.73e-46 | 174 |
Msa0961470 | AT1G01340.2 | 28.824 | 510 | 238 | 17 | 103 | 507 | 132 | 621 | 6.35e-46 | 172 |
Msa0961470 | AT1G01340.1 | 28.824 | 510 | 238 | 17 | 103 | 507 | 127 | 616 | 7.83e-46 | 171 |
Msa0961470 | AT2G23980.3 | 28.839 | 534 | 238 | 15 | 106 | 511 | 170 | 689 | 9.82e-46 | 172 |
Msa0961470 | AT2G23980.2 | 28.839 | 534 | 238 | 15 | 106 | 511 | 170 | 689 | 9.82e-46 | 172 |
Msa0961470 | AT2G23980.8 | 28.839 | 534 | 238 | 15 | 106 | 511 | 170 | 689 | 9.82e-46 | 172 |
Msa0961470 | AT2G23980.7 | 28.839 | 534 | 238 | 15 | 106 | 511 | 170 | 689 | 9.82e-46 | 172 |
Msa0961470 | AT1G19780.2 | 32.168 | 429 | 205 | 15 | 153 | 507 | 29 | 445 | 1.81e-45 | 168 |
Msa0961470 | AT5G53130.1 | 28.916 | 498 | 236 | 15 | 110 | 507 | 155 | 634 | 5.29e-44 | 166 |
Msa0961470 | AT2G28260.2 | 28.770 | 504 | 247 | 17 | 106 | 511 | 94 | 583 | 9.62e-41 | 156 |
Msa0961470 | AT2G28260.1 | 28.770 | 504 | 247 | 17 | 106 | 511 | 134 | 623 | 1.27e-40 | 156 |
Msa0961470 | AT5G14870.1 | 27.756 | 508 | 245 | 17 | 110 | 511 | 110 | 601 | 6.61e-40 | 154 |
Msa0961470 | AT5G54250.3 | 26.177 | 531 | 263 | 22 | 90 | 514 | 138 | 645 | 4.42e-34 | 137 |
Msa0961470 | AT3G48010.1 | 26.426 | 526 | 259 | 18 | 100 | 514 | 105 | 613 | 9.72e-34 | 136 |
Msa0961470 | AT5G54250.2 | 26.404 | 534 | 263 | 21 | 90 | 514 | 138 | 650 | 2.49e-33 | 135 |
Msa0961470 | AT5G54250.1 | 26.404 | 534 | 263 | 21 | 90 | 514 | 138 | 650 | 2.49e-33 | 135 |
Msa0961470 | AT5G54250.4 | 26.404 | 534 | 263 | 21 | 90 | 514 | 138 | 650 | 2.49e-33 | 135 |
Msa0961470 | AT2G46430.1 | 27.462 | 528 | 246 | 22 | 110 | 522 | 143 | 648 | 2.64e-31 | 129 |
Msa0961470 | AT2G46430.2 | 27.462 | 528 | 246 | 22 | 110 | 522 | 143 | 648 | 2.64e-31 | 129 |
Msa0961470 | AT5G15410.2 | 25.806 | 527 | 252 | 21 | 93 | 506 | 176 | 676 | 3.59e-30 | 125 |
Msa0961470 | AT5G15410.1 | 25.806 | 527 | 252 | 21 | 93 | 506 | 177 | 677 | 4.28e-30 | 125 |
Msa0961470 | AT2G46440.1 | 26.306 | 517 | 257 | 20 | 115 | 522 | 105 | 606 | 2.46e-20 | 95.1 |
Msa0961470 | AT2G46440.2 | 29.904 | 311 | 149 | 10 | 268 | 522 | 131 | 428 | 9.29e-19 | 89.4 |
Msa0961470 | AT2G46450.3 | 23.725 | 510 | 263 | 18 | 115 | 522 | 69 | 554 | 2.55e-18 | 89.0 |
Msa0961470 | AT2G46450.4 | 22.948 | 536 | 279 | 18 | 99 | 522 | 77 | 590 | 3.10e-18 | 88.6 |
Msa0961470 | AT2G46450.1 | 22.948 | 536 | 279 | 18 | 99 | 522 | 77 | 590 | 3.10e-18 | 88.6 |
Msa0961470 | AT2G46450.2 | 23.725 | 510 | 263 | 18 | 115 | 522 | 82 | 567 | 3.23e-18 | 88.6 |
Find 118 sgRNAs with CRISPR-Local
Find 565 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTGCTTTGTTGCCATTT+TGG | 0.171505 | 6_3:+83178282 | Msa0961470:CDS |
AATCCAATTAATATTCTATT+TGG | 0.194730 | 6_3:-83187207 | None:intergenic |
TTCTCGAGAACCGTTCTTTC+AGG | 0.218391 | 6_3:-83182564 | None:intergenic |
TTAGGTATGAATCACCTTAT+TGG | 0.252510 | 6_3:+83183877 | Msa0961470:intron |
TATGGAGACGCCAAAGGTTT+TGG | 0.265806 | 6_3:+83178166 | Msa0961470:CDS |
GTACCAAATAGAATATTAAT+TGG | 0.266974 | 6_3:+83187204 | Msa0961470:three_prime_UTR |
CATATATTTCTCCTGGGCCT+AGG | 0.288575 | 6_3:+83179130 | Msa0961470:CDS |
CTTATCATTTCTCCATACTA+TGG | 0.324096 | 6_3:-83180700 | None:intergenic |
AATGGCAACAAAGCAAATTA+TGG | 0.327497 | 6_3:-83178278 | None:intergenic |
ACACATATGGAACAAGGTTT+TGG | 0.342347 | 6_3:+83178255 | Msa0961470:CDS |
GTCACAACGATTATTCATAA+AGG | 0.345325 | 6_3:+83187081 | Msa0961470:CDS |
TACTTCAATTTATATTCATA+TGG | 0.350097 | 6_3:+83177569 | Msa0961470:CDS |
TGAATATATCAGCCATAGTA+TGG | 0.351240 | 6_3:+83180688 | Msa0961470:CDS |
GTAGTTAAGAGCAATCATTT+TGG | 0.357273 | 6_3:-83179184 | None:intergenic |
AAATAAGGGATCAACCAAAA+TGG | 0.360882 | 6_3:-83178296 | None:intergenic |
AGGGTGGCATATATTTCTCC+TGG | 0.364565 | 6_3:+83179123 | Msa0961470:CDS |
TTATACGAAGGGGATGCTTT+TGG | 0.373040 | 6_3:+83183072 | Msa0961470:CDS |
TATGTGTACAACTTTAGATT+CGG | 0.374568 | 6_3:-83178239 | None:intergenic |
TTGACTCTGATGATACCATT+TGG | 0.378026 | 6_3:-83180264 | None:intergenic |
GCTGCACGTGATCTCCAATA+AGG | 0.383559 | 6_3:-83183891 | None:intergenic |
TATAACGTCGTATGTCTATC+TGG | 0.384287 | 6_3:-83182602 | None:intergenic |
CACCTAGTTTCTTTAGTAAG+TGG | 0.389405 | 6_3:-83180789 | None:intergenic |
GATTCGGGGTTCATAACTTC+AGG | 0.390153 | 6_3:-83178223 | None:intergenic |
ATATATTTCTCCTGGGCCTA+GGG | 0.398500 | 6_3:+83179131 | Msa0961470:CDS |
ATGTGTACAACTTTAGATTC+GGG | 0.405182 | 6_3:-83178238 | None:intergenic |
ATGAGTTGTGACTTCTTCAA+TGG | 0.407575 | 6_3:-83183601 | None:intergenic |
TCTGATGGAGTATGTTTGTC+TGG | 0.407880 | 6_3:-83187130 | None:intergenic |
TCACAACGATTATTCATAAA+GGG | 0.407902 | 6_3:+83187082 | Msa0961470:exon |
AAACTCCAAGCTATTATTTG+TGG | 0.413373 | 6_3:+83182039 | Msa0961470:CDS |
AATCTAAAGTTGTACACATA+TGG | 0.415645 | 6_3:+83178242 | Msa0961470:CDS |
TACAATGTCCATCATGGCAT+TGG | 0.431782 | 6_3:+83182073 | Msa0961470:CDS |
CATAGTATGGAGAAATGATA+AGG | 0.432716 | 6_3:+83180701 | Msa0961470:CDS |
ATACCATTTGGGTTGGAGAC+TGG | 0.436563 | 6_3:-83180252 | None:intergenic |
GTGTCCTCGATGTGTTCCTT+TGG | 0.440295 | 6_3:-83177542 | None:intergenic |
TGACTCTGATGATACCATTT+GGG | 0.446734 | 6_3:-83180263 | None:intergenic |
TTGGTGAAGAGCTTCTAATA+TGG | 0.448642 | 6_3:+83183091 | Msa0961470:CDS |
TATTGCATTACCTCTTCCTC+AGG | 0.448920 | 6_3:+83179236 | Msa0961470:CDS |
AACTCCAAGCTATTATTTGT+GGG | 0.461813 | 6_3:+83182040 | Msa0961470:CDS |
AATGTGTATATCTCAATGTA+TGG | 0.466862 | 6_3:+83187290 | Msa0961470:three_prime_UTR |
TTGGAGAGCATCGGAAAAGA+TGG | 0.470007 | 6_3:+83183036 | Msa0961470:CDS |
ATTACAGCAAATTATTACTC+TGG | 0.473447 | 6_3:+83182007 | Msa0961470:intron |
ATGTTTGTCTGGTACATTCA+AGG | 0.476687 | 6_3:-83187119 | None:intergenic |
ACAATGTCCATCATGGCATT+GGG | 0.480702 | 6_3:+83182074 | Msa0961470:CDS |
CTCACGTTCAACAAGTCATA+AGG | 0.484138 | 6_3:+83183646 | Msa0961470:CDS |
ACTTGTTTGAATGCCACATC+TGG | 0.484399 | 6_3:+83180732 | Msa0961470:CDS |
CAGCAAATTATTACTCTGGC+TGG | 0.489904 | 6_3:+83182011 | Msa0961470:intron |
CAGTTACGAAATTCTCTGTA+TGG | 0.491809 | 6_3:+83178148 | Msa0961470:intron |
TTCAGGAATACATGAGGAGC+AGG | 0.495543 | 6_3:-83178206 | None:intergenic |
GGTAAAGAAGTAAAGATTCA+AGG | 0.496180 | 6_3:+83183507 | Msa0961470:CDS |
TTTAGTAAGTGGTATAGCAT+TGG | 0.496798 | 6_3:-83180778 | None:intergenic |
ATAGTATGGAGAAATGATAA+GGG | 0.498973 | 6_3:+83180702 | Msa0961470:CDS |
GGAGAGTACTACAGGCTGAA+TGG | 0.499326 | 6_3:+83182523 | Msa0961470:intron |
ACGTGCAGCAAAGATAATTC+AGG | 0.501673 | 6_3:+83183905 | Msa0961470:CDS |
ATATTTCTCCTGGGCCTAGG+GGG | 0.503461 | 6_3:+83179133 | Msa0961470:CDS |
ACTGTGTCTCGTATGGATCA+AGG | 0.505588 | 6_3:-83177596 | None:intergenic |
GATTGAAACAAGGGCTTCTG+AGG | 0.509017 | 6_3:-83187158 | None:intergenic |
AAGAAATGTACCTGAGGAAG+AGG | 0.512197 | 6_3:-83179246 | None:intergenic |
TGTATGGCCACCGTCCGTTG+TGG | 0.516972 | 6_3:+83187306 | Msa0961470:three_prime_UTR |
AAAGGGAGGCGGCTGAACTT+CGG | 0.518433 | 6_3:-83187334 | None:intergenic |
GGGTGGCATATATTTCTCCT+GGG | 0.521856 | 6_3:+83179124 | Msa0961470:CDS |
GTCATGCAGGAGAGTACTAC+AGG | 0.527307 | 6_3:+83182515 | Msa0961470:intron |
TTGGGACTCTTGCTTCTCAT+CGG | 0.527508 | 6_3:+83182092 | Msa0961470:CDS |
TGGCCAGTCTCCAACCCAAA+TGG | 0.534053 | 6_3:+83180249 | Msa0961470:CDS |
CAAGAGTCCCAATGCCATGA+TGG | 0.535332 | 6_3:-83182081 | None:intergenic |
TGTTTGTCTGGTACATTCAA+GGG | 0.536326 | 6_3:-83187118 | None:intergenic |
TCAATTGTGATTCTAAAGCT+AGG | 0.536951 | 6_3:+83180664 | Msa0961470:CDS |
TCACGAATGGCATCTAAGAC+AGG | 0.538157 | 6_3:-83182922 | None:intergenic |
CAAAGATAATTCAGGATGCA+TGG | 0.538439 | 6_3:+83183913 | Msa0961470:CDS |
CCTTTGGAAACTAGAATCAT+CGG | 0.542649 | 6_3:-83177526 | None:intergenic |
GGAGACTGGCCAATTATCCT+AGG | 0.543288 | 6_3:-83180238 | None:intergenic |
ATCCGTGTAGATTAGAATGA+TGG | 0.547174 | 6_3:-83180629 | None:intergenic |
TATTTCTCCTGGGCCTAGGG+GGG | 0.549339 | 6_3:+83179134 | Msa0961470:CDS |
CCTCTTTACAATGTCCATCA+TGG | 0.549712 | 6_3:+83182067 | Msa0961470:CDS |
GTATCATCAGAGTCAACCTT+GGG | 0.551744 | 6_3:+83180271 | Msa0961470:CDS |
CTGTGTCTCGTATGGATCAA+GGG | 0.553472 | 6_3:-83177595 | None:intergenic |
ACTTCCCACAAATAATAGCT+TGG | 0.554692 | 6_3:-83182044 | None:intergenic |
TTGTTTGTTGCAGTTTAGGG+TGG | 0.554831 | 6_3:+83179107 | Msa0961470:intron |
GGATTCGACTGTGTCTCGTA+TGG | 0.558440 | 6_3:-83177603 | None:intergenic |
TTCATAAAGGGAGGGATGCA+TGG | 0.559222 | 6_3:+83187094 | Msa0961470:exon |
GGATGTGTTTCTGACAGAAT+CGG | 0.559297 | 6_3:-83177495 | None:intergenic |
TTCTAATCTACACGGATGCA+TGG | 0.565466 | 6_3:+83180635 | Msa0961470:CDS |
TATATTTCTCCTGGGCCTAG+GGG | 0.566423 | 6_3:+83179132 | Msa0961470:CDS |
TCTGATGATACCATTTGGGT+TGG | 0.570225 | 6_3:-83180259 | None:intergenic |
CGTGGAAAATTGGAGAGCAT+CGG | 0.570916 | 6_3:+83183027 | Msa0961470:CDS |
TTCTTCGAACTCTTAGCAAG+AGG | 0.581508 | 6_3:+83182129 | Msa0961470:CDS |
CAACGATTATTCATAAAGGG+AGG | 0.586371 | 6_3:+83187085 | Msa0961470:exon |
GGTATCATCAGAGTCAACCT+TGG | 0.587677 | 6_3:+83180270 | Msa0961470:CDS |
AAATGTGGTGATTGAAACAA+GGG | 0.588065 | 6_3:-83187167 | None:intergenic |
TACAGGCTGAATGGAATAGT+CGG | 0.588776 | 6_3:+83182532 | Msa0961470:CDS |
TTCGGCGATCCCACAACGGA+CGG | 0.594352 | 6_3:-83187316 | None:intergenic |
AGTAAAATGCTTAACCAATG+TGG | 0.600876 | 6_3:+83183554 | Msa0961470:CDS |
GTGTAGATTAGAATGATGGC+AGG | 0.604429 | 6_3:-83180625 | None:intergenic |
GCATAATGCTCCTGAAAGAA+CGG | 0.604538 | 6_3:+83182554 | Msa0961470:CDS |
CCATGATGGACATTGTAAAG+AGG | 0.606570 | 6_3:-83182067 | None:intergenic |
GAACAGTCTTCTCAAAGCAA+AGG | 0.610957 | 6_3:+83183120 | Msa0961470:CDS |
AACGATTATTCATAAAGGGA+GGG | 0.612130 | 6_3:+83187086 | Msa0961470:exon |
AAAATGATTATCAAACATTG+AGG | 0.612466 | 6_3:+83183976 | Msa0961470:CDS |
CAATGATAAAGTCATTATTG+AGG | 0.613625 | 6_3:-83179206 | None:intergenic |
CCGATGATTCTAGTTTCCAA+AGG | 0.618061 | 6_3:+83177526 | Msa0961470:CDS |
CTAGAATCATCGGATCGTTG+TGG | 0.620647 | 6_3:-83177516 | None:intergenic |
GAAGTAAAGATTCAAGGACA+TGG | 0.625167 | 6_3:+83183513 | Msa0961470:CDS |
TGTGTACAACTTTAGATTCG+GGG | 0.627373 | 6_3:-83178237 | None:intergenic |
AAAATGTGGTGATTGAAACA+AGG | 0.633171 | 6_3:-83187168 | None:intergenic |
TACCACTTACTAAAGAAACT+AGG | 0.634735 | 6_3:+83180787 | Msa0961470:CDS |
CTTATGACTTGTTGAACGTG+AGG | 0.637470 | 6_3:-83183645 | None:intergenic |
AGTTGTACACATATGGAACA+AGG | 0.640811 | 6_3:+83178249 | Msa0961470:CDS |
TGCCATCATTCTAATCTACA+CGG | 0.642345 | 6_3:+83180627 | Msa0961470:CDS |
AAAATGCTTAACCAATGTGG+AGG | 0.645697 | 6_3:+83183557 | Msa0961470:CDS |
ATATGCAATAAAATTGCCCA+AGG | 0.647981 | 6_3:-83180287 | None:intergenic |
GGCGATCCCACAACGGACGG+TGG | 0.655250 | 6_3:-83187313 | None:intergenic |
AAGTGAAAATGCCTCCACAT+TGG | 0.655949 | 6_3:-83183568 | None:intergenic |
AGCATTGGCATAGATTCCAT+AGG | 0.659792 | 6_3:-83180763 | None:intergenic |
CATAACTTCAGGAATACATG+AGG | 0.666993 | 6_3:-83178212 | None:intergenic |
TCTCTGTATGGAGACGCCAA+AGG | 0.669806 | 6_3:+83178160 | Msa0961470:CDS |
GAACTTCGGCGATCCCACAA+CGG | 0.682044 | 6_3:-83187320 | None:intergenic |
CACTTACTAAAGAAACTAGG+TGG | 0.704093 | 6_3:+83180790 | Msa0961470:CDS |
GGCAGGCATCTTGCAAACAG+TGG | 0.718744 | 6_3:-83180608 | None:intergenic |
GTTTCCAAAGGAACACATCG+AGG | 0.725939 | 6_3:+83177538 | Msa0961470:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | + | chr6_3:83181536-83181555 | Msa0961470:intron | 0.0% |
!! | AAAAATAGTACTATAATTTA+TGG | + | chr6_3:83177757-83177776 | Msa0961470:intron | 10.0% |
!!! | TATATATTTCTTTTGTATAT+AGG | + | chr6_3:83180066-83180085 | Msa0961470:intron | 10.0% |
!! | TAAAATTAGAAATATTGTAT+TGG | - | chr6_3:83181139-83181158 | None:intergenic | 10.0% |
!! | TAATTAAAAGTAAGTATAAA+AGG | - | chr6_3:83181334-83181353 | None:intergenic | 10.0% |
!!! | TAATTATGAATGAATTTTAT+TGG | - | chr6_3:83184143-83184162 | None:intergenic | 10.0% |
!!! | TAATTATTTGCTTTAAAATT+TGG | + | chr6_3:83184157-83184176 | Msa0961470:intron | 10.0% |
!! | TATTATAAAATCAACTAATT+TGG | - | chr6_3:83184345-83184364 | None:intergenic | 10.0% |
!!! | TAATTTTTCTATCAAAAAAT+TGG | + | chr6_3:83184491-83184510 | Msa0961470:intron | 10.0% |
!!! | AATTTTTCTATCAAAAAATT+GGG | + | chr6_3:83184492-83184511 | Msa0961470:intron | 10.0% |
!!! | ATTTTTTTTGTTAAAGTTAA+TGG | + | chr6_3:83186717-83186736 | Msa0961470:intron | 10.0% |
!! | TACTTCAATTTATATTCATA+TGG | + | chr6_3:83177569-83177588 | Msa0961470:CDS | 15.0% |
!! | TACTATAATTTATGGATATT+TGG | + | chr6_3:83177765-83177784 | Msa0961470:intron | 15.0% |
!! | AATAATTGATCGTATTAATA+TGG | - | chr6_3:83177869-83177888 | None:intergenic | 15.0% |
!! | TAGAATGAGAATAAAAATAA+GGG | - | chr6_3:83178313-83178332 | None:intergenic | 15.0% |
!! | ATAGAATGAGAATAAAAATA+AGG | - | chr6_3:83178314-83178333 | None:intergenic | 15.0% |
!!! | GATTTTACAAAGTAAATAAA+AGG | - | chr6_3:83178359-83178378 | None:intergenic | 15.0% |
!!! | TCATTTTGAAACAATTTTTT+TGG | - | chr6_3:83178425-83178444 | None:intergenic | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr6_3:83178527-83178546 | None:intergenic | 15.0% |
!! | AAATTATCCTTATTAACTAT+TGG | - | chr6_3:83178551-83178570 | None:intergenic | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | + | chr6_3:83178550-83178569 | Msa0961470:intron | 15.0% |
!!! | TTAGTTAATCACTTTAAAAT+TGG | - | chr6_3:83179883-83179902 | None:intergenic | 15.0% |
!! | TCAATTCAATATATATAGTA+CGG | - | chr6_3:83180458-83180477 | None:intergenic | 15.0% |
!! | TTTGTTCACTATAATAAAAA+CGG | - | chr6_3:83180965-83180984 | None:intergenic | 15.0% |
!! | ATTATAGTGAACAAATATTA+TGG | + | chr6_3:83180970-83180989 | Msa0961470:intron | 15.0% |
!!! | ATTTGATTTTATAGAAGAAA+CGG | - | chr6_3:83181359-83181378 | None:intergenic | 15.0% |
!! | TATATATATATATGTATTGG+TGG | - | chr6_3:83181529-83181548 | None:intergenic | 15.0% |
!!! | GAATTTTAAATTTGAATTCA+TGG | - | chr6_3:83182286-83182305 | None:intergenic | 15.0% |
!! | AAAATGCATATTTCAATAAA+TGG | + | chr6_3:83182453-83182472 | Msa0961470:intron | 15.0% |
!! | AAAAGATATTTAAATGAAAC+AGG | + | chr6_3:83182825-83182844 | Msa0961470:intron | 15.0% |
!!! | ATTTTTCTATCAAAAAATTG+GGG | + | chr6_3:83184493-83184512 | Msa0961470:intron | 15.0% |
!!! | AGAAATTTCTTATTTTTCTA+CGG | + | chr6_3:83184850-83184869 | Msa0961470:intron | 15.0% |
!! | CAATATATATAAATTACTTG+AGG | - | chr6_3:83184941-83184960 | None:intergenic | 15.0% |
!! | AACATAAAATTTCTTATCAT+TGG | - | chr6_3:83186559-83186578 | None:intergenic | 15.0% |
!! | AATCCAATTAATATTCTATT+TGG | - | chr6_3:83187210-83187229 | None:intergenic | 15.0% |
!! | AAATAAAAATGAACACTTGT+TGG | + | chr6_3:83177632-83177651 | Msa0961470:intron | 20.0% |
!! | AATAAAAATGAACACTTGTT+GGG | + | chr6_3:83177633-83177652 | Msa0961470:intron | 20.0% |
!! | TATAATTTATGGATATTTGG+TGG | + | chr6_3:83177768-83177787 | Msa0961470:intron | 20.0% |
!! | TAAGTATTATGAAAAGTTGT+TGG | - | chr6_3:83177986-83178005 | None:intergenic | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | - | chr6_3:83178464-83178483 | None:intergenic | 20.0% |
!! | AAACTAACCAATAGTTAATA+AGG | + | chr6_3:83178541-83178560 | Msa0961470:intron | 20.0% |
!! | ATATATGTTACTAGAATAGA+TGG | - | chr6_3:83178870-83178889 | None:intergenic | 20.0% |
!! | TCTAGTAACATATATATGTT+TGG | + | chr6_3:83178875-83178894 | Msa0961470:intron | 20.0% |
!! | ATATATGTTTGGTATAATAG+TGG | + | chr6_3:83178886-83178905 | Msa0961470:intron | 20.0% |
!!! | TTCAACAAAAAGTATATTCA+TGG | - | chr6_3:83179337-83179356 | None:intergenic | 20.0% |
!! | AAAATACTAAGAACTTTGAA+TGG | + | chr6_3:83179387-83179406 | Msa0961470:intron | 20.0% |
!! | GCTACTAACAAAAATATAAA+TGG | + | chr6_3:83179456-83179475 | Msa0961470:intron | 20.0% |
!! | AAAATATAAATGGAAACCAA+AGG | + | chr6_3:83179466-83179485 | Msa0961470:intron | 20.0% |
!! | AAGATGATGTAAATTACAAA+GGG | - | chr6_3:83179635-83179654 | None:intergenic | 20.0% |
!! | AAAGATGATGTAAATTACAA+AGG | - | chr6_3:83179636-83179655 | None:intergenic | 20.0% |
!!! | AAGTATTGTTACTATTATAG+TGG | + | chr6_3:83179850-83179869 | Msa0961470:intron | 20.0% |
!!! | AAATTTTGCAGATAATGATA+TGG | + | chr6_3:83180110-83180129 | Msa0961470:intron | 20.0% |
!! | TTCCTAAGTATAATAATCTT+AGG | + | chr6_3:83180184-83180203 | Msa0961470:intron | 20.0% |
!! | ATCCTAAGATTATTATACTT+AGG | - | chr6_3:83180189-83180208 | None:intergenic | 20.0% |
!! | AGAAATATTGTATTGGAAAA+TGG | - | chr6_3:83181132-83181151 | None:intergenic | 20.0% |
!!! | GCATTTTCCTTTTTTTATAT+TGG | + | chr6_3:83181192-83181211 | Msa0961470:intron | 20.0% |
!!! | ATAAAAGGTATTACTGTTAA+TGG | - | chr6_3:83181319-83181338 | None:intergenic | 20.0% |
!!! | TTTTGTTTACTTTGTCAAAA+CGG | + | chr6_3:83181485-83181504 | Msa0961470:intron | 20.0% |
!! | TGGATATATATATGCAATAT+AGG | - | chr6_3:83183744-83183763 | None:intergenic | 20.0% |
!! | AAAATGATTATCAAACATTG+AGG | + | chr6_3:83183976-83183995 | Msa0961470:CDS | 20.0% |
!! | ATATAATGCAGTTAATCATA+GGG | - | chr6_3:83184058-83184077 | None:intergenic | 20.0% |
!! | AATATAATGCAGTTAATCAT+AGG | - | chr6_3:83184059-83184078 | None:intergenic | 20.0% |
!!! | TTTGCTTTAAAATTTGGATT+AGG | + | chr6_3:83184163-83184182 | Msa0961470:intron | 20.0% |
!!! | TGAAAAATGTTTTTAAGTGA+CGG | - | chr6_3:83184233-83184252 | None:intergenic | 20.0% |
!!! | CAACTTATCTATTTTTTATG+CGG | + | chr6_3:83184253-83184272 | Msa0961470:intron | 20.0% |
!!! | AACTTATCTATTTTTTATGC+GGG | + | chr6_3:83184254-83184273 | Msa0961470:intron | 20.0% |
!! | ATTGCATAATGAAGAAATAA+AGG | + | chr6_3:83184957-83184976 | Msa0961470:intron | 20.0% |
!!! | TACTTTAGTGATTGAATTTT+CGG | + | chr6_3:83186055-83186074 | Msa0961470:intron | 20.0% |
!!! | TTTTAAGTCAAAATTGCTTT+TGG | + | chr6_3:83186629-83186648 | Msa0961470:intron | 20.0% |
!!! | TTTAAGTCAAAATTGCTTTT+GGG | + | chr6_3:83186630-83186649 | Msa0961470:intron | 20.0% |
!!! | TAATGGTAAATTCTAGTTTT+TGG | + | chr6_3:83186734-83186753 | Msa0961470:intron | 20.0% |
!! | GTACCAAATAGAATATTAAT+TGG | + | chr6_3:83187204-83187223 | Msa0961470:three_prime_UTR | 20.0% |
!!! | TGTTCATTTTTATTTGTGAC+AGG | - | chr6_3:83177627-83177646 | None:intergenic | 25.0% |
!! | ATAAAAATGAACACTTGTTG+GGG | + | chr6_3:83177634-83177653 | Msa0961470:intron | 25.0% |
! | TTCAACTATATTTGATTCCA+AGG | + | chr6_3:83177659-83177678 | Msa0961470:intron | 25.0% |
! | TCAACTATATTTGATTCCAA+GGG | + | chr6_3:83177660-83177679 | Msa0961470:intron | 25.0% |
! | TAATATAGACTTCCTATGTT+TGG | + | chr6_3:83177697-83177716 | Msa0961470:intron | 25.0% |
! | CTGTAAAGTAGTCATAAAAA+TGG | + | chr6_3:83178012-83178031 | Msa0961470:intron | 25.0% |
! | TATGTGTACAACTTTAGATT+CGG | - | chr6_3:83178242-83178261 | None:intergenic | 25.0% |
!! | AATCTAAAGTTGTACACATA+TGG | + | chr6_3:83178242-83178261 | Msa0961470:CDS | 25.0% |
!!! | GAAACAATTTTTTTGGCTAA+AGG | - | chr6_3:83178418-83178437 | None:intergenic | 25.0% |
!! | ATAAATGTCTTGTTACCAAT+TGG | + | chr6_3:83178728-83178747 | Msa0961470:intron | 25.0% |
! | AGCACAAATTAAATCAGAAA+AGG | - | chr6_3:83178844-83178863 | None:intergenic | 25.0% |
!! | TAGTTAAGAGCAATCATTTT+GGG | - | chr6_3:83179186-83179205 | None:intergenic | 25.0% |
! | CAATGATAAAGTCATTATTG+AGG | - | chr6_3:83179209-83179228 | None:intergenic | 25.0% |
!!! | TTAGGCTTTTGAAAACATTT+GGG | - | chr6_3:83179298-83179317 | None:intergenic | 25.0% |
!! | GTTGTGAGATTTTAGATAAA+AGG | + | chr6_3:83179357-83179376 | Msa0961470:intron | 25.0% |
!! | AGATTTTAGATAAAAGGTAG+AGG | + | chr6_3:83179363-83179382 | Msa0961470:intron | 25.0% |
!! | ATAGTGTTTGAGTATCTTTT+AGG | - | chr6_3:83179431-83179450 | None:intergenic | 25.0% |
! | AACATCAAAGTTATTGAAAG+CGG | - | chr6_3:83179713-83179732 | None:intergenic | 25.0% |
! | TGAAACAACATCATTACAAT+AGG | - | chr6_3:83179929-83179948 | None:intergenic | 25.0% |
!! | AATTATTCAGATTTTTGCCT+AGG | + | chr6_3:83180221-83180240 | Msa0961470:CDS | 25.0% |
! | AATATATATAGTACGGATAC+GGG | - | chr6_3:83180451-83180470 | None:intergenic | 25.0% |
! | CAATATATATAGTACGGATA+CGG | - | chr6_3:83180452-83180471 | None:intergenic | 25.0% |
! | TTATTCAGTGAATGAATGTT+AGG | + | chr6_3:83180522-83180541 | Msa0961470:intron | 25.0% |
! | CTACAAAGAAAAAAGAGAAA+GGG | - | chr6_3:83180580-83180599 | None:intergenic | 25.0% |
! | TCTACAAAGAAAAAAGAGAA+AGG | - | chr6_3:83180581-83180600 | None:intergenic | 25.0% |
!!! | TTTCTCTTTTTTCTTTGTAG+AGG | + | chr6_3:83180580-83180599 | Msa0961470:intron | 25.0% |
!!! | TTCTCTTTTTTCTTTGTAGA+GGG | + | chr6_3:83180581-83180600 | Msa0961470:intron | 25.0% |
! | ATAGTATGGAGAAATGATAA+GGG | + | chr6_3:83180702-83180721 | Msa0961470:CDS | 25.0% |
!! | AATATGTGTATTCACTCTTT+TGG | + | chr6_3:83180820-83180839 | Msa0961470:intron | 25.0% |
!! | ATATGTGTATTCACTCTTTT+GGG | + | chr6_3:83180821-83180840 | Msa0961470:intron | 25.0% |
!!! | TAATCAAGGTTCTAAAAAAC+TGG | + | chr6_3:83180889-83180908 | Msa0961470:intron | 25.0% |
! | ATATTATGGAAACAGCTATT+AGG | + | chr6_3:83180984-83181003 | Msa0961470:intron | 25.0% |
!!! | ACAGCTATTAGGTTTTTTAT+AGG | + | chr6_3:83180995-83181014 | Msa0961470:intron | 25.0% |
!!! | CAGCTATTAGGTTTTTTATA+GGG | + | chr6_3:83180996-83181015 | Msa0961470:intron | 25.0% |
! | CTTAGGTCCAATATAAAAAA+AGG | - | chr6_3:83181202-83181221 | None:intergenic | 25.0% |
! | TCTGCATTGAAAAAAGATTA+AGG | - | chr6_3:83181285-83181304 | None:intergenic | 25.0% |
! | GACAAAGTAAACAAAAATCA+CGG | - | chr6_3:83181481-83181500 | None:intergenic | 25.0% |
! | TATGCAACTAATTAACAAGT+TGG | - | chr6_3:83181743-83181762 | None:intergenic | 25.0% |
! | TTGTAAAAATAAGTGAGCTT+TGG | - | chr6_3:83181798-83181817 | None:intergenic | 25.0% |
! | TTTACAATTAACAAACATCG+CGG | + | chr6_3:83181811-83181830 | Msa0961470:intron | 25.0% |
! | ATTACCAAATAAGCACTTAA+AGG | + | chr6_3:83181936-83181955 | Msa0961470:intron | 25.0% |
! | ATTACAGCAAATTATTACTC+TGG | + | chr6_3:83182007-83182026 | Msa0961470:intron | 25.0% |
! | TATGCATAATGTACAAATGA+TGG | + | chr6_3:83182478-83182497 | Msa0961470:intron | 25.0% |
!! | TTTTCTCATTCAACTTCTAT+TGG | - | chr6_3:83182747-83182766 | None:intergenic | 25.0% |
!! | TTTTATTGTTCGTGGAAAAT+TGG | + | chr6_3:83183017-83183036 | Msa0961470:CDS | 25.0% |
!!! | ATTTCAGTTTTGTTATACGA+AGG | + | chr6_3:83183060-83183079 | Msa0961470:CDS | 25.0% |
!!! | TTTCAGTTTTGTTATACGAA+GGG | + | chr6_3:83183061-83183080 | Msa0961470:CDS | 25.0% |
! | AAAAAGTAGCAATAATCATC+TGG | + | chr6_3:83183169-83183188 | Msa0961470:intron | 25.0% |
! | AGAAACATGTTTCATCAATA+TGG | + | chr6_3:83183211-83183230 | Msa0961470:intron | 25.0% |
!!! | AGTTAGTTAGGATTTTAGTT+AGG | + | chr6_3:83183271-83183290 | Msa0961470:intron | 25.0% |
!!! | GTTTGAGAGCTATTTTTTTT+TGG | - | chr6_3:83183421-83183440 | None:intergenic | 25.0% |
!! | TAGTTATCGGTCTTATAATT+TGG | + | chr6_3:83183771-83183790 | Msa0961470:intron | 25.0% |
!!! | TGTTTGATAATCATTTTGTG+TGG | - | chr6_3:83183973-83183992 | None:intergenic | 25.0% |
!! | ATTTTATTGGAAATAACGCA+TGG | - | chr6_3:83184130-83184149 | None:intergenic | 25.0% |
!! | ATTAAAAGACAGTTTTGCAA+GGG | - | chr6_3:83184199-83184218 | None:intergenic | 25.0% |
!!! | GAAAAATGTTTTTAAGTGAC+GGG | - | chr6_3:83184232-83184251 | None:intergenic | 25.0% |
! | AAATGCAAATCTATTATGCT+TGG | + | chr6_3:83184294-83184313 | Msa0961470:intron | 25.0% |
! | GGTATTGTAAGAAATGAATT+AGG | - | chr6_3:83184387-83184406 | None:intergenic | 25.0% |
! | TCAAAAAATTGGGGAATAAA+AGG | + | chr6_3:83184502-83184521 | Msa0961470:intron | 25.0% |
! | AATATACATTATCGAAACCA+TGG | + | chr6_3:83184587-83184606 | Msa0961470:intron | 25.0% |
!! | AATGTTTGATAATCATTGTG+TGG | - | chr6_3:83184740-83184759 | None:intergenic | 25.0% |
! | ATGTTTGATTCATTACACTT+TGG | + | chr6_3:83184781-83184800 | Msa0961470:intron | 25.0% |
! | GTAGATGAATAGAATAACTA+TGG | - | chr6_3:83185083-83185102 | None:intergenic | 25.0% |
! | CACAATTTAAAGAAAGAAGA+AGG | - | chr6_3:83185259-83185278 | None:intergenic | 25.0% |
! | GAGTAAAAACTGAGAAATTA+GGG | - | chr6_3:83185402-83185421 | None:intergenic | 25.0% |
! | TGAGTAAAAACTGAGAAATT+AGG | - | chr6_3:83185403-83185422 | None:intergenic | 25.0% |
! | AATTAAGATCAACAAGATCA+GGG | - | chr6_3:83185628-83185647 | None:intergenic | 25.0% |
! | TAATTAAGATCAACAAGATC+AGG | - | chr6_3:83185629-83185648 | None:intergenic | 25.0% |
! | AAAGACTATAGTCTAAGAAA+TGG | - | chr6_3:83185718-83185737 | None:intergenic | 25.0% |
! | TCATTAAACTTAGATCTCTT+TGG | + | chr6_3:83185866-83185885 | Msa0961470:intron | 25.0% |
! | CATTAAACTTAGATCTCTTT+GGG | + | chr6_3:83185867-83185886 | Msa0961470:intron | 25.0% |
!! | ATTCAAGTACAATTTGGAAT+AGG | - | chr6_3:83185913-83185932 | None:intergenic | 25.0% |
! | TGTTGTTAAACAAATTAGAC+CGG | + | chr6_3:83186088-83186107 | Msa0961470:intron | 25.0% |
!!! | ATCATTGACAAGTCATTTTT+CGG | + | chr6_3:83186477-83186496 | Msa0961470:intron | 25.0% |
! | AATTAGACATGAAAAGAATG+GGG | - | chr6_3:83186680-83186699 | None:intergenic | 25.0% |
! | CAATTAGACATGAAAAGAAT+GGG | - | chr6_3:83186681-83186700 | None:intergenic | 25.0% |
! | TCAATTAGACATGAAAAGAA+TGG | - | chr6_3:83186682-83186701 | None:intergenic | 25.0% |
! | TCACAACGATTATTCATAAA+GGG | + | chr6_3:83187082-83187101 | Msa0961470:exon | 25.0% |
! | AATGTGTATATCTCAATGTA+TGG | + | chr6_3:83187290-83187309 | Msa0961470:three_prime_UTR | 25.0% |
CAACTATATTTGATTCCAAG+GGG | + | chr6_3:83177661-83177680 | Msa0961470:intron | 30.0% | |
TGAAGTCAATTTCCAAACAT+AGG | - | chr6_3:83177712-83177731 | None:intergenic | 30.0% | |
AGATAATCTTATACTCCGTT+AGG | - | chr6_3:83177804-83177823 | None:intergenic | 30.0% | |
! | AAGTTTTCTTCCAAAACCTT+TGG | - | chr6_3:83178179-83178198 | None:intergenic | 30.0% |
ATGTGTACAACTTTAGATTC+GGG | - | chr6_3:83178241-83178260 | None:intergenic | 30.0% | |
AATGGCAACAAAGCAAATTA+TGG | - | chr6_3:83178281-83178300 | None:intergenic | 30.0% | |
!! | AATTTGCTTTGTTGCCATTT+TGG | + | chr6_3:83178282-83178301 | Msa0961470:CDS | 30.0% |
AAATAAGGGATCAACCAAAA+TGG | - | chr6_3:83178299-83178318 | None:intergenic | 30.0% | |
ATTCTCATTCTATGTGAACA+AGG | + | chr6_3:83178321-83178340 | Msa0961470:intron | 30.0% | |
!! | AAAGGACACTCATTTTGAAA+CGG | - | chr6_3:83178400-83178419 | None:intergenic | 30.0% |
! | TTTTCTCATTCATTTTCTGC+AGG | + | chr6_3:83178702-83178721 | Msa0961470:intron | 30.0% |
TCTTGTTACCAATTGGAAAA+CGG | + | chr6_3:83178735-83178754 | Msa0961470:intron | 30.0% | |
AAGAATGTTCAAGAGATACA+GGG | - | chr6_3:83178797-83178816 | None:intergenic | 30.0% | |
TAAGAATGTTCAAGAGATAC+AGG | - | chr6_3:83178798-83178817 | None:intergenic | 30.0% | |
!! | ATCGTGGTTTTTCAAAAGTT+AGG | - | chr6_3:83179001-83179020 | None:intergenic | 30.0% |
!! | TAACTTTTGAAAAACCACGA+TGG | + | chr6_3:83179000-83179019 | Msa0961470:intron | 30.0% |
! | AAGTTGTTTGTTGCAGTTTA+GGG | + | chr6_3:83179104-83179123 | Msa0961470:intron | 30.0% |
! | GTAGTTAAGAGCAATCATTT+TGG | - | chr6_3:83179187-83179206 | None:intergenic | 30.0% |
!! | CTTAGGCTTTTGAAAACATT+TGG | - | chr6_3:83179299-83179318 | None:intergenic | 30.0% |
!!! | ATTTTTTATGGGTACCCTTT+GGG | - | chr6_3:83179787-83179806 | None:intergenic | 30.0% |
!!! | TATTTTTTATGGGTACCCTT+TGG | - | chr6_3:83179788-83179807 | None:intergenic | 30.0% |
! | AGATTTTTGCCTAGGATAAT+TGG | + | chr6_3:83180229-83180248 | Msa0961470:CDS | 30.0% |
ATATGCAATAAAATTGCCCA+AGG | - | chr6_3:83180290-83180309 | None:intergenic | 30.0% | |
AATTGCGAATTATGTGACTA+TGG | + | chr6_3:83180477-83180496 | Msa0961470:intron | 30.0% | |
ATTATGTGACTATGGATGAA+AGG | + | chr6_3:83180485-83180504 | Msa0961470:intron | 30.0% | |
AAGGGAATAAGGAAAGAAAT+TGG | - | chr6_3:83180562-83180581 | None:intergenic | 30.0% | |
GAAAAAAGAGAAAGGGAATA+AGG | - | chr6_3:83180573-83180592 | None:intergenic | 30.0% | |
!! | TCAATTGTGATTCTAAAGCT+AGG | + | chr6_3:83180664-83180683 | Msa0961470:CDS | 30.0% |
TGAATATATCAGCCATAGTA+TGG | + | chr6_3:83180688-83180707 | Msa0961470:CDS | 30.0% | |
CTTATCATTTCTCCATACTA+TGG | - | chr6_3:83180703-83180722 | None:intergenic | 30.0% | |
CATAGTATGGAGAAATGATA+AGG | + | chr6_3:83180701-83180720 | Msa0961470:CDS | 30.0% | |
TTTAGTAAGTGGTATAGCAT+TGG | - | chr6_3:83180781-83180800 | None:intergenic | 30.0% | |
TACCACTTACTAAAGAAACT+AGG | + | chr6_3:83180787-83180806 | Msa0961470:CDS | 30.0% | |
! | TATGTGTATTCACTCTTTTG+GGG | + | chr6_3:83180822-83180841 | Msa0961470:intron | 30.0% |
TCTTTCTTCTGTTGTAATCA+AGG | + | chr6_3:83180875-83180894 | Msa0961470:intron | 30.0% | |
CACTATAATAAAAACGGTAC+AGG | - | chr6_3:83180959-83180978 | None:intergenic | 30.0% | |
TAATGCAAACTTACTGCATT+TGG | - | chr6_3:83181061-83181080 | None:intergenic | 30.0% | |
CTAAGTTATCCTTACAAAAC+CGG | + | chr6_3:83181217-83181236 | Msa0961470:intron | 30.0% | |
CCATTAATAAATTCAAGTCG+CGG | + | chr6_3:83181382-83181401 | Msa0961470:intron | 30.0% | |
!!! | GGTTTCTTTTTTTTCGTAGA+TGG | - | chr6_3:83181408-83181427 | None:intergenic | 30.0% |
! | ACCGTAACAAATTTTTGTCA+CGG | + | chr6_3:83181436-83181455 | Msa0961470:intron | 30.0% |
AAACAAAACCTAGATGGAAA+TGG | - | chr6_3:83181591-83181610 | None:intergenic | 30.0% | |
GAATGTAAACAAAACCTAGA+TGG | - | chr6_3:83181597-83181616 | None:intergenic | 30.0% | |
TACTCTAGTTACACTTGTAT+AGG | - | chr6_3:83181671-83181690 | None:intergenic | 30.0% | |
! | ATGATTTTGCAATAGCTTCA+AGG | - | chr6_3:83181883-83181902 | None:intergenic | 30.0% |
AAGCTATTGCAAAATCATTG+TGG | + | chr6_3:83181885-83181904 | Msa0961470:intron | 30.0% | |
TGTTCCTTTAAGTGCTTATT+TGG | - | chr6_3:83181943-83181962 | None:intergenic | 30.0% | |
AAAGCTCACATAGGTATAAT+TGG | - | chr6_3:83181987-83182006 | None:intergenic | 30.0% | |
AAACTCCAAGCTATTATTTG+TGG | + | chr6_3:83182039-83182058 | Msa0961470:CDS | 30.0% | |
AACTCCAAGCTATTATTTGT+GGG | + | chr6_3:83182040-83182059 | Msa0961470:CDS | 30.0% | |
TTTCTGCACAAGTTAATTCT+CGG | + | chr6_3:83182168-83182187 | Msa0961470:intron | 30.0% | |
AAGTTAATTCTCGGTAACAA+TGG | + | chr6_3:83182177-83182196 | Msa0961470:intron | 30.0% | |
TCATGGTAGATACTAAATAG+AGG | - | chr6_3:83182269-83182288 | None:intergenic | 30.0% | |
!! | TCATTGTTACAAAGAGCATT+TGG | - | chr6_3:83182852-83182871 | None:intergenic | 30.0% |
GTAAAAACGACATACATTGA+AGG | + | chr6_3:83182952-83182971 | Msa0961470:CDS | 30.0% | |
!!! | TTCAGTTTTGTTATACGAAG+GGG | + | chr6_3:83183062-83183081 | Msa0961470:CDS | 30.0% |
CATGTTTCTCAGTTTCTTTA+AGG | - | chr6_3:83183200-83183219 | None:intergenic | 30.0% | |
TAGACTTCAGTTAGTTAGTT+AGG | + | chr6_3:83183259-83183278 | Msa0961470:intron | 30.0% | |
TTGCTCTTTCTATAGAGATT+AGG | - | chr6_3:83183310-83183329 | None:intergenic | 30.0% | |
! | TCATCTTGTGATTTGTAACT+CGG | + | chr6_3:83183470-83183489 | Msa0961470:intron | 30.0% |
GGTAAAGAAGTAAAGATTCA+AGG | + | chr6_3:83183507-83183526 | Msa0961470:CDS | 30.0% | |
AGTAAAATGCTTAACCAATG+TGG | + | chr6_3:83183554-83183573 | Msa0961470:CDS | 30.0% | |
TATCCATGCTTCATAGTTAT+CGG | + | chr6_3:83183758-83183777 | Msa0961470:intron | 30.0% | |
! | TCGGTCTTATAATTTGGAAT+AGG | + | chr6_3:83183777-83183796 | Msa0961470:intron | 30.0% |
!!! | CTAACCAACAAGTTTTGAAA+GGG | - | chr6_3:83183817-83183836 | None:intergenic | 30.0% |
TTTGGTTGTTGTGTTATGTT+AGG | + | chr6_3:83183859-83183878 | Msa0961470:intron | 30.0% | |
TTAGGTATGAATCACCTTAT+TGG | + | chr6_3:83183877-83183896 | Msa0961470:intron | 30.0% | |
AATGACAACAAAGAAATGGA+AGG | - | chr6_3:83184011-83184030 | None:intergenic | 30.0% | |
ACAGAATGACAACAAAGAAA+TGG | - | chr6_3:83184015-83184034 | None:intergenic | 30.0% | |
! | CATTAAAAGACAGTTTTGCA+AGG | - | chr6_3:83184200-83184219 | None:intergenic | 30.0% |
! | CAAAACTGTCTTTTAATGCT+AGG | + | chr6_3:83184202-83184221 | Msa0961470:intron | 30.0% |
GTCTCATATTAGATGAGATA+AGG | - | chr6_3:83184426-83184445 | None:intergenic | 30.0% | |
ACATACATCACATATCACAA+GGG | + | chr6_3:83184542-83184561 | Msa0961470:intron | 30.0% | |
TGACGATATTGTGTTATGTT+AGG | + | chr6_3:83184626-83184645 | Msa0961470:intron | 30.0% | |
CAAACAAAATTCAGTTTGCA+TGG | + | chr6_3:83184680-83184699 | Msa0961470:intron | 30.0% | |
! | TTTTTCTACGGATTTTTCCA+AGG | + | chr6_3:83184862-83184881 | Msa0961470:intron | 30.0% |
TTGGAAACAATATCTCATGA+AGG | - | chr6_3:83184908-83184927 | None:intergenic | 30.0% | |
TACTTGAGGATTTCAAAGTT+TGG | - | chr6_3:83184927-83184946 | None:intergenic | 30.0% | |
AAAGAAGAAGGAAAGAATCA+AGG | - | chr6_3:83185247-83185266 | None:intergenic | 30.0% | |
AGAAACTGCAATAAAATGCA+GGG | - | chr6_3:83185328-83185347 | None:intergenic | 30.0% | |
AAGAAACTGCAATAAAATGC+AGG | - | chr6_3:83185329-83185348 | None:intergenic | 30.0% | |
! | CAGTTTTTACTCAATTTCCA+TGG | + | chr6_3:83185410-83185429 | Msa0961470:intron | 30.0% |
TATTACATTCATCCAAGTGA+AGG | + | chr6_3:83185479-83185498 | Msa0961470:intron | 30.0% | |
! | AATAAGCTTGCTTTCATTGA+TGG | + | chr6_3:83185590-83185609 | Msa0961470:intron | 30.0% |
GCAATCATCTTCTTTATTCA+TGG | + | chr6_3:83185670-83185689 | Msa0961470:intron | 30.0% | |
ATGGATTCAAAAACAGAGTT+AGG | - | chr6_3:83185699-83185718 | None:intergenic | 30.0% | |
!! | ATGATACATCTATTTCTGCT+AGG | + | chr6_3:83185739-83185758 | Msa0961470:intron | 30.0% |
!! | TGATACATCTATTTCTGCTA+GGG | + | chr6_3:83185740-83185759 | Msa0961470:intron | 30.0% |
GGATGAATTCAAGTACAATT+TGG | - | chr6_3:83185919-83185938 | None:intergenic | 30.0% | |
ATAATTCTTAGCAACACGAA+TGG | - | chr6_3:83185956-83185975 | None:intergenic | 30.0% | |
AGTTGCTAAGGCATAAAAAT+TGG | - | chr6_3:83186171-83186190 | None:intergenic | 30.0% | |
!!! | AGAAGAGTTTTAAGTTGTAG+AGG | - | chr6_3:83186355-83186374 | None:intergenic | 30.0% |
! | GAAAAATGACTTGTCAATGA+TGG | - | chr6_3:83186478-83186497 | None:intergenic | 30.0% |
! | AACAAAGAGCACAAATATAG+TGG | - | chr6_3:83187049-83187068 | None:intergenic | 30.0% |
GTCACAACGATTATTCATAA+AGG | + | chr6_3:83187081-83187100 | Msa0961470:CDS | 30.0% | |
AACGATTATTCATAAAGGGA+GGG | + | chr6_3:83187086-83187105 | Msa0961470:exon | 30.0% | |
AAATGTGGTGATTGAAACAA+GGG | - | chr6_3:83187170-83187189 | None:intergenic | 30.0% | |
AAAATGTGGTGATTGAAACA+AGG | - | chr6_3:83187171-83187190 | None:intergenic | 30.0% | |
! | CCTTTGGAAACTAGAATCAT+CGG | - | chr6_3:83177529-83177548 | None:intergenic | 35.0% |
GGTGGAATTTATGTTCCTAA+CGG | + | chr6_3:83177786-83177805 | Msa0961470:intron | 35.0% | |
AGTGCATTCATCATAATGTG+TGG | - | chr6_3:83178081-83178100 | None:intergenic | 35.0% | |
CAGTTACGAAATTCTCTGTA+TGG | + | chr6_3:83178148-83178167 | Msa0961470:intron | 35.0% | |
CATAACTTCAGGAATACATG+AGG | - | chr6_3:83178215-83178234 | None:intergenic | 35.0% | |
TGTGTACAACTTTAGATTCG+GGG | - | chr6_3:83178240-83178259 | None:intergenic | 35.0% | |
AGTTGTACACATATGGAACA+AGG | + | chr6_3:83178249-83178268 | Msa0961470:CDS | 35.0% | |
! | ACACATATGGAACAAGGTTT+TGG | + | chr6_3:83178255-83178274 | Msa0961470:CDS | 35.0% |
!! | TTCAAAATGAGTGTCGCTTT+AGG | - | chr6_3:83178435-83178454 | None:intergenic | 35.0% |
!! | AAGCGACACTCATTTTGAAA+CGG | + | chr6_3:83178633-83178652 | Msa0961470:intron | 35.0% |
!!! | TGATATTGCCGTTTTCCAAT+TGG | - | chr6_3:83178746-83178765 | None:intergenic | 35.0% |
GTGATTGCTGAGAAATTACT+TGG | - | chr6_3:83178822-83178841 | None:intergenic | 35.0% | |
! | TAGTGGATATGCTCGAATAA+CGG | + | chr6_3:83178903-83178922 | Msa0961470:intron | 35.0% |
!! | TAGCTTTTAGAAAGCCATAG+TGG | - | chr6_3:83178973-83178992 | None:intergenic | 35.0% |
CAAACATACGGTGATGATAT+GGG | + | chr6_3:83179056-83179075 | Msa0961470:intron | 35.0% | |
CTAAACTGCAACAAACAACT+TGG | - | chr6_3:83179105-83179124 | None:intergenic | 35.0% | |
! | CAAGTTGTTTGTTGCAGTTT+AGG | + | chr6_3:83179103-83179122 | Msa0961470:intron | 35.0% |
TAACAACAACATTGAGCGAA+AGG | - | chr6_3:83179272-83179291 | None:intergenic | 35.0% | |
TTGAGTGTCAGTTTATCCTT+TGG | - | chr6_3:83179485-83179504 | None:intergenic | 35.0% | |
TCTTATAACCGATACCCAAA+GGG | + | chr6_3:83179770-83179789 | Msa0961470:intron | 35.0% | |
GTACCCATAAAAAATACCCA+CGG | + | chr6_3:83179792-83179811 | Msa0961470:intron | 35.0% | |
!!! | GTACCGTGGGTATTTTTTAT+GGG | - | chr6_3:83179798-83179817 | None:intergenic | 35.0% |
AAAAACCCTCACAACAAGTA+TGG | + | chr6_3:83179825-83179844 | Msa0961470:intron | 35.0% | |
AAAACCCTCACAACAAGTAT+GGG | + | chr6_3:83179826-83179845 | Msa0961470:intron | 35.0% | |
TGACTCTGATGATACCATTT+GGG | - | chr6_3:83180266-83180285 | None:intergenic | 35.0% | |
TTGACTCTGATGATACCATT+TGG | - | chr6_3:83180267-83180286 | None:intergenic | 35.0% | |
ATGTTCTTTAGCCATGTTGT+TGG | + | chr6_3:83180322-83180341 | Msa0961470:intron | 35.0% | |
TGCCATCATTCTAATCTACA+CGG | + | chr6_3:83180627-83180646 | Msa0961470:CDS | 35.0% | |
ATCCGTGTAGATTAGAATGA+TGG | - | chr6_3:83180632-83180651 | None:intergenic | 35.0% | |
CACCTAGTTTCTTTAGTAAG+TGG | - | chr6_3:83180792-83180811 | None:intergenic | 35.0% | |
CACTTACTAAAGAAACTAGG+TGG | + | chr6_3:83180790-83180809 | Msa0961470:CDS | 35.0% | |
!! | AATGCTAAAGAGTGCTCTTA+GGG | - | chr6_3:83181177-83181196 | None:intergenic | 35.0% |
!! | AAATGCTAAAGAGTGCTCTT+AGG | - | chr6_3:83181178-83181197 | None:intergenic | 35.0% |
!! | CGGTTTTGTAAGGATAACTT+AGG | - | chr6_3:83181219-83181238 | None:intergenic | 35.0% |
AAAGATTAAGGTGTGACTAG+AGG | - | chr6_3:83181273-83181292 | None:intergenic | 35.0% | |
CCGCGACTTGAATTTATTAA+TGG | - | chr6_3:83181385-83181404 | None:intergenic | 35.0% | |
!! | AATTTGTTACGGTCGAAACA+TGG | - | chr6_3:83181429-83181448 | None:intergenic | 35.0% |
!! | GCCGTGACAAAAATTTGTTA+CGG | - | chr6_3:83181440-83181459 | None:intergenic | 35.0% |
TCTCACTCGTAAAACTAGAT+TGG | - | chr6_3:83181621-83181640 | None:intergenic | 35.0% | |
!!! | TCTAGTTTTACGAGTGAGAT+AGG | + | chr6_3:83181622-83181641 | Msa0961470:intron | 35.0% |
! | CGGTAAGTTGACATAAATCA+TGG | + | chr6_3:83181831-83181850 | Msa0961470:intron | 35.0% |
! | GTGCTTATTTGGTAATACAG+TGG | - | chr6_3:83181932-83181951 | None:intergenic | 35.0% |
AAGCACTTAAAGGAACATGA+AGG | + | chr6_3:83181946-83181965 | Msa0961470:intron | 35.0% | |
AGCACTTAAAGGAACATGAA+GGG | + | chr6_3:83181947-83181966 | Msa0961470:intron | 35.0% | |
TGCTGTAATAAAGCTCACAT+AGG | - | chr6_3:83181996-83182015 | None:intergenic | 35.0% | |
ACTTCCCACAAATAATAGCT+TGG | - | chr6_3:83182047-83182066 | None:intergenic | 35.0% | |
!! | TCTCATTTTTCATGTGCGTT+TGG | + | chr6_3:83182201-83182220 | Msa0961470:intron | 35.0% |
AACCTCTATGCATCATTTCT+AGG | - | chr6_3:83182336-83182355 | None:intergenic | 35.0% | |
!! | TCATACATTCTGAGATCTTC+TGG | - | chr6_3:83182394-83182413 | None:intergenic | 35.0% |
!! | TGCATTTTGACAATGTCGAA+AGG | - | chr6_3:83182441-83182460 | None:intergenic | 35.0% |
! | ATGTCTATCTGGAGATTTTC+TGG | - | chr6_3:83182594-83182613 | None:intergenic | 35.0% |
TATAACGTCGTATGTCTATC+TGG | - | chr6_3:83182605-83182624 | None:intergenic | 35.0% | |
!!! | GATTCGAATTTTTTCCTTGC+TGG | + | chr6_3:83182888-83182907 | Msa0961470:intron | 35.0% |
!!! | AATTTTTTCCTTGCTGGATG+AGG | + | chr6_3:83182894-83182913 | Msa0961470:intron | 35.0% |
!! | AGGAAGTAGAATTTTGAGTC+AGG | + | chr6_3:83182972-83182991 | Msa0961470:CDS | 35.0% |
!! | GGAAGTAGAATTTTGAGTCA+GGG | + | chr6_3:83182973-83182992 | Msa0961470:CDS | 35.0% |
GGTGATCTCGTTAAAAAGAT+GGG | + | chr6_3:83182994-83183013 | Msa0961470:CDS | 35.0% | |
!!! | AAGATGGGTTTTATTGTTCG+TGG | + | chr6_3:83183009-83183028 | Msa0961470:CDS | 35.0% |
TTGGTGAAGAGCTTCTAATA+TGG | + | chr6_3:83183091-83183110 | Msa0961470:CDS | 35.0% | |
ATATATGCTTGAGAGCTTGA+TGG | - | chr6_3:83183395-83183414 | None:intergenic | 35.0% | |
! | AACTCGGTTTCTTTTGTAGA+AGG | + | chr6_3:83183486-83183505 | Msa0961470:intron | 35.0% |
GAAGTAAAGATTCAAGGACA+TGG | + | chr6_3:83183513-83183532 | Msa0961470:CDS | 35.0% | |
AAAATGCTTAACCAATGTGG+AGG | + | chr6_3:83183557-83183576 | Msa0961470:CDS | 35.0% | |
ATGAGTTGTGACTTCTTCAA+TGG | - | chr6_3:83183604-83183623 | None:intergenic | 35.0% | |
!! | AAACACAACAAGGTAATGGA+AGG | - | chr6_3:83183681-83183700 | None:intergenic | 35.0% |
ACAGAAACACAACAAGGTAA+TGG | - | chr6_3:83183685-83183704 | None:intergenic | 35.0% | |
TCAACCCTTTCAAAACTTGT+TGG | + | chr6_3:83183810-83183829 | Msa0961470:intron | 35.0% | |
!!! | CCTAACCAACAAGTTTTGAA+AGG | - | chr6_3:83183818-83183837 | None:intergenic | 35.0% |
!! | CCTTTCAAAACTTGTTGGTT+AGG | + | chr6_3:83183815-83183834 | Msa0961470:intron | 35.0% |
CAAAGATAATTCAGGATGCA+TGG | + | chr6_3:83183913-83183932 | Msa0961470:CDS | 35.0% | |
!!! | AAATGTTTTTAAGTGACGGG+TGG | - | chr6_3:83184229-83184248 | None:intergenic | 35.0% |
TAAGGTAATGTGCATACAAG+TGG | - | chr6_3:83184408-83184427 | None:intergenic | 35.0% | |
CACATACATCACATATCACA+AGG | + | chr6_3:83184541-83184560 | Msa0961470:intron | 35.0% | |
AAATCAATATGTCAGAGCCA+TGG | - | chr6_3:83184607-83184626 | None:intergenic | 35.0% | |
TTAGGTATGAATCGCCTTAT+GGG | + | chr6_3:83184644-83184663 | Msa0961470:intron | 35.0% | |
AGACTAGAGATTGCAAACAA+TGG | - | chr6_3:83184815-83184834 | None:intergenic | 35.0% | |
! | TGTTTGCAATCTCTAGTCTT+TGG | + | chr6_3:83184816-83184835 | Msa0961470:intron | 35.0% |
! | ACGGATTTTTCCAAGGATTT+AGG | + | chr6_3:83184869-83184888 | Msa0961470:intron | 35.0% |
TTCCAAGGATTTAGGTGTTT+AGG | + | chr6_3:83184877-83184896 | Msa0961470:intron | 35.0% | |
TACCTAAACACCTAAATCCT+TGG | - | chr6_3:83184882-83184901 | None:intergenic | 35.0% | |
ACTTGCTTCACAAGTTATCT+AGG | + | chr6_3:83185005-83185024 | Msa0961470:intron | 35.0% | |
AGGAAAGAATCAAGGAAACA+GGG | - | chr6_3:83185239-83185258 | None:intergenic | 35.0% | |
AAGGAAAGAATCAAGGAAAC+AGG | - | chr6_3:83185240-83185259 | None:intergenic | 35.0% | |
CACAAAATCAGTGTCAGAAT+TGG | - | chr6_3:83185459-83185478 | None:intergenic | 35.0% | |
AAAGAACTAAGACCTTCACT+TGG | - | chr6_3:83185494-83185513 | None:intergenic | 35.0% | |
! | AAGTGAAGGTCTTAGTTCTT+TGG | + | chr6_3:83185493-83185512 | Msa0961470:intron | 35.0% |
GCAATATAATTGGACCCATT+GGG | - | chr6_3:83185533-83185552 | None:intergenic | 35.0% | |
AGCAATATAATTGGACCCAT+TGG | - | chr6_3:83185534-83185553 | None:intergenic | 35.0% | |
ATGGGTCCAATTATATTGCT+TGG | + | chr6_3:83185534-83185553 | Msa0961470:intron | 35.0% | |
GTGACTCCAAGCAATATAAT+TGG | - | chr6_3:83185543-83185562 | None:intergenic | 35.0% | |
TTTGAAGGAATGTTCTGCAA+AGG | + | chr6_3:83185767-83185786 | Msa0961470:intron | 35.0% | |
! | GCAAGGTACTAAATCAATGT+TGG | + | chr6_3:83185837-83185856 | Msa0961470:intron | 35.0% |
CGAATGGAATCAAATCTACA+AGG | - | chr6_3:83185940-83185959 | None:intergenic | 35.0% | |
AAGAATCTTGTGTGCTAATG+TGG | + | chr6_3:83185987-83186006 | Msa0961470:intron | 35.0% | |
TCAGTCACTAAGGTAAAAAC+CGG | - | chr6_3:83186110-83186129 | None:intergenic | 35.0% | |
GACTGAAAATTCAGTCACTA+AGG | - | chr6_3:83186120-83186139 | None:intergenic | 35.0% | |
TGCCTTAGCAACTGAAAATT+CGG | + | chr6_3:83186178-83186197 | Msa0961470:intron | 35.0% | |
GCATTCAAATCAAGATGAAG+AGG | - | chr6_3:83186331-83186350 | None:intergenic | 35.0% | |
TTGTCAATGATGGTAAAAGC+TGG | - | chr6_3:83186468-83186487 | None:intergenic | 35.0% | |
CAAATCTTTGTCCAAGTTTG+GGG | - | chr6_3:83186509-83186528 | None:intergenic | 35.0% | |
CCAAATCTTTGTCCAAGTTT+GGG | - | chr6_3:83186510-83186529 | None:intergenic | 35.0% | |
CCAAACTTGGACAAAGATTT+GGG | + | chr6_3:83186508-83186527 | Msa0961470:intron | 35.0% | |
CAAACTTGGACAAAGATTTG+GGG | + | chr6_3:83186509-83186528 | Msa0961470:intron | 35.0% | |
CAATTGTTTCCTATAAGACG+TGG | + | chr6_3:83186532-83186551 | Msa0961470:intron | 35.0% | |
!!! | GTGTTTTGGAGAATGCTAAA+TGG | - | chr6_3:83186999-83187018 | None:intergenic | 35.0% |
!! | GATTTACGTTGTTGGTGTTT+TGG | - | chr6_3:83187013-83187032 | None:intergenic | 35.0% |
CAACGATTATTCATAAAGGG+AGG | + | chr6_3:83187085-83187104 | Msa0961470:exon | 35.0% | |
TGTTTGTCTGGTACATTCAA+GGG | - | chr6_3:83187121-83187140 | None:intergenic | 35.0% | |
ATGTTTGTCTGGTACATTCA+AGG | - | chr6_3:83187122-83187141 | None:intergenic | 35.0% | |
CTTGTATGCAGAGAAAAATG+TGG | - | chr6_3:83187185-83187204 | None:intergenic | 35.0% | |
! | GGATGTGTTTCTGACAGAAT+CGG | - | chr6_3:83177498-83177517 | None:intergenic | 40.0% |
!! | CCGATGATTCTAGTTTCCAA+AGG | + | chr6_3:83177526-83177545 | Msa0961470:CDS | 40.0% |
TAAGAAGAAAGTGATCCCCT+TGG | - | chr6_3:83177679-83177698 | None:intergenic | 40.0% | |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr6_3:83178637-83178656 | None:intergenic | 40.0% |
! | TGTGCAGGGTATTAATTGGA+GGG | - | chr6_3:83178498-83178517 | None:intergenic | 40.0% |
! | GTAGTGTGCAGGGTATTAAT+TGG | - | chr6_3:83178502-83178521 | None:intergenic | 40.0% |
! | TACTTTGGAAGTAGTGTGCA+GGG | - | chr6_3:83178512-83178531 | None:intergenic | 40.0% |
! | ATACTTTGGAAGTAGTGTGC+AGG | - | chr6_3:83178513-83178532 | None:intergenic | 40.0% |
! | GAGATACAGGGCATCAATTA+GGG | - | chr6_3:83178785-83178804 | None:intergenic | 40.0% |
! | AGAGATACAGGGCATCAATT+AGG | - | chr6_3:83178786-83178805 | None:intergenic | 40.0% |
AGAATCACAACGATCCACTA+TGG | + | chr6_3:83178956-83178975 | Msa0961470:intron | 40.0% | |
AGAATCACAATGATCCATCG+TGG | - | chr6_3:83179017-83179036 | None:intergenic | 40.0% | |
CCATATCATCACCGTATGTT+TGG | - | chr6_3:83179058-83179077 | None:intergenic | 40.0% | |
CCAAACATACGGTGATGATA+TGG | + | chr6_3:83179055-83179074 | Msa0961470:intron | 40.0% | |
!! | CAAACAACTTGGTGTCATAG+TGG | - | chr6_3:83179094-83179113 | None:intergenic | 40.0% |
! | TTGTTTGTTGCAGTTTAGGG+TGG | + | chr6_3:83179107-83179126 | Msa0961470:intron | 40.0% |
ATATATTTCTCCTGGGCCTA+GGG | + | chr6_3:83179131-83179150 | Msa0961470:CDS | 40.0% | |
TATTGCATTACCTCTTCCTC+AGG | + | chr6_3:83179236-83179255 | Msa0961470:CDS | 40.0% | |
AAGAAATGTACCTGAGGAAG+AGG | - | chr6_3:83179249-83179268 | None:intergenic | 40.0% | |
GAAAGGAAGAAATGTACCTG+AGG | - | chr6_3:83179255-83179274 | None:intergenic | 40.0% | |
CTCTTATAACCGATACCCAA+AGG | + | chr6_3:83179769-83179788 | Msa0961470:intron | 40.0% | |
!!! | CGTACCGTGGGTATTTTTTA+TGG | - | chr6_3:83179799-83179818 | None:intergenic | 40.0% |
AAAAATACCCACGGTACGTA+TGG | + | chr6_3:83179801-83179820 | Msa0961470:intron | 40.0% | |
! | GTTTTTACCATACGTACCGT+GGG | - | chr6_3:83179811-83179830 | None:intergenic | 40.0% |
TCTGATGATACCATTTGGGT+TGG | - | chr6_3:83180262-83180281 | None:intergenic | 40.0% | |
GTATCATCAGAGTCAACCTT+GGG | + | chr6_3:83180271-83180290 | Msa0961470:CDS | 40.0% | |
!! | TTTAGCCATGTTGTTGGTTC+AGG | + | chr6_3:83180328-83180347 | Msa0961470:intron | 40.0% |
ATGGTATCTCTTTGCTCTAC+AGG | + | chr6_3:83180351-83180370 | Msa0961470:intron | 40.0% | |
TGCGGATAATTCAGTACCTA+GGG | - | chr6_3:83180412-83180431 | None:intergenic | 40.0% | |
ATGCGGATAATTCAGTACCT+AGG | - | chr6_3:83180413-83180432 | None:intergenic | 40.0% | |
GTGTAGATTAGAATGATGGC+AGG | - | chr6_3:83180628-83180647 | None:intergenic | 40.0% | |
TTCTAATCTACACGGATGCA+TGG | + | chr6_3:83180635-83180654 | Msa0961470:CDS | 40.0% | |
ACTTGTTTGAATGCCACATC+TGG | + | chr6_3:83180732-83180751 | Msa0961470:CDS | 40.0% | |
!! | ATAGGAAAAAGCACCAGATG+TGG | - | chr6_3:83180748-83180767 | None:intergenic | 40.0% |
!!! | ACATCTGGTGCTTTTTCCTA+TGG | + | chr6_3:83180747-83180766 | Msa0961470:CDS | 40.0% |
!! | AGCATTGGCATAGATTCCAT+AGG | - | chr6_3:83180766-83180785 | None:intergenic | 40.0% |
ACACGAACAAAATGCATACC+TGG | - | chr6_3:83180851-83180870 | None:intergenic | 40.0% | |
!! | TTTTGTCGCAGCTGTTTTGA+CGG | - | chr6_3:83180921-83180940 | None:intergenic | 40.0% |
TCAAAACAGCTGCGACAAAA+AGG | + | chr6_3:83180921-83180940 | Msa0961470:intron | 40.0% | |
TTCCTTATCAAGTGCCCTTA+GGG | - | chr6_3:83181037-83181056 | None:intergenic | 40.0% | |
TTTCCTTATCAAGTGCCCTT+AGG | - | chr6_3:83181038-83181057 | None:intergenic | 40.0% | |
!! | CCATATAAGCCGGTTTTGTA+AGG | - | chr6_3:83181229-83181248 | None:intergenic | 40.0% |
! | CCTTACAAAACCGGCTTATA+TGG | + | chr6_3:83181226-83181245 | Msa0961470:intron | 40.0% |
! | AAAACCGGCTTATATGGTGA+AGG | + | chr6_3:83181232-83181251 | Msa0961470:intron | 40.0% |
! | AAACCGGCTTATATGGTGAA+GGG | + | chr6_3:83181233-83181252 | Msa0961470:intron | 40.0% |
TTTGCAATAGCTTCAAGGTG+TGG | - | chr6_3:83181878-83181897 | None:intergenic | 40.0% | |
CAGCAAATTATTACTCTGGC+TGG | + | chr6_3:83182011-83182030 | Msa0961470:intron | 40.0% | |
!! | CCATGATGGACATTGTAAAG+AGG | - | chr6_3:83182070-83182089 | None:intergenic | 40.0% |
CCTCTTTACAATGTCCATCA+TGG | + | chr6_3:83182067-83182086 | Msa0961470:CDS | 40.0% | |
TACAATGTCCATCATGGCAT+TGG | + | chr6_3:83182073-83182092 | Msa0961470:CDS | 40.0% | |
ACAATGTCCATCATGGCATT+GGG | + | chr6_3:83182074-83182093 | Msa0961470:CDS | 40.0% | |
TTCTTCGAACTCTTAGCAAG+AGG | + | chr6_3:83182129-83182148 | Msa0961470:CDS | 40.0% | |
!!! | TTCATGTGCGTTTGGTTTTG+CGG | + | chr6_3:83182209-83182228 | Msa0961470:intron | 40.0% |
ATATGTTCCATCCTGCTTAC+AGG | + | chr6_3:83182308-83182327 | Msa0961470:intron | 40.0% | |
AGCCTAGAAATGATGCATAG+AGG | + | chr6_3:83182331-83182350 | Msa0961470:intron | 40.0% | |
GATCTTCTGGTAAGCAATGA+TGG | - | chr6_3:83182381-83182400 | None:intergenic | 40.0% | |
TACGATCTTGTATGTCATGC+AGG | + | chr6_3:83182502-83182521 | Msa0961470:intron | 40.0% | |
TACAGGCTGAATGGAATAGT+CGG | + | chr6_3:83182532-83182551 | Msa0961470:CDS | 40.0% | |
GCATAATGCTCCTGAAAGAA+CGG | + | chr6_3:83182554-83182573 | Msa0961470:CDS | 40.0% | |
! | TTTTACTAGTCGCTCACGAA+TGG | - | chr6_3:83182938-83182957 | None:intergenic | 40.0% |
GGGTGATCTCGTTAAAAAGA+TGG | + | chr6_3:83182993-83183012 | Msa0961470:CDS | 40.0% | |
! | TTATACGAAGGGGATGCTTT+TGG | + | chr6_3:83183072-83183091 | Msa0961470:CDS | 40.0% |
GAACAGTCTTCTCAAAGCAA+AGG | + | chr6_3:83183120-83183139 | Msa0961470:CDS | 40.0% | |
AAGTGAAAATGCCTCCACAT+TGG | - | chr6_3:83183571-83183590 | None:intergenic | 40.0% | |
!! | CTTATGACTTGTTGAACGTG+AGG | - | chr6_3:83183648-83183667 | None:intergenic | 40.0% |
CTCACGTTCAACAAGTCATA+AGG | + | chr6_3:83183646-83183665 | Msa0961470:CDS | 40.0% | |
!! | ACAACAAGGTAATGGAAGGA+AGG | - | chr6_3:83183677-83183696 | None:intergenic | 40.0% |
CTATCGACAGAAACACAACA+AGG | - | chr6_3:83183691-83183710 | None:intergenic | 40.0% | |
AGACCGATAACTATGAAGCA+TGG | - | chr6_3:83183764-83183783 | None:intergenic | 40.0% | |
AAATCATGATGTCAGAGGCA+TGG | - | chr6_3:83183842-83183861 | None:intergenic | 40.0% | |
ATGCCTCTGACATCATGATT+TGG | + | chr6_3:83183841-83183860 | Msa0961470:intron | 40.0% | |
CAACCAAATCATGATGTCAG+AGG | - | chr6_3:83183847-83183866 | None:intergenic | 40.0% | |
ACGTGCAGCAAAGATAATTC+AGG | + | chr6_3:83183905-83183924 | Msa0961470:CDS | 40.0% | |
!! | GCTTGGTGCATGAATACAAA+TGG | + | chr6_3:83184311-83184330 | Msa0961470:intron | 40.0% |
GGTGCATGAATACAAATGGT+AGG | + | chr6_3:83184315-83184334 | Msa0961470:intron | 40.0% | |
GCATGAATACAAATGGTAGG+TGG | + | chr6_3:83184318-83184337 | Msa0961470:intron | 40.0% | |
GGGGAATAAAAGGACATAGA+TGG | + | chr6_3:83184512-83184531 | Msa0961470:intron | 40.0% | |
GTTAGGTATGAATCGCCTTA+TGG | + | chr6_3:83184643-83184662 | Msa0961470:intron | 40.0% | |
GCTCTATGTGATTTCCCATA+AGG | - | chr6_3:83184661-83184680 | None:intergenic | 40.0% | |
TTCAGTTTGCATGGAGAAGT+AGG | + | chr6_3:83184689-83184708 | Msa0961470:intron | 40.0% | |
! | GAAGAAGCATGAAGCAATGA+TGG | - | chr6_3:83185171-83185190 | None:intergenic | 40.0% |
ATCTTCAACGAGGAACAAGA+AGG | - | chr6_3:83185193-83185212 | None:intergenic | 40.0% | |
AAGACGAAGAATCTTCAACG+AGG | - | chr6_3:83185203-83185222 | None:intergenic | 40.0% | |
AAGAATCAAGGAAACAGGGA+GGG | - | chr6_3:83185235-83185254 | None:intergenic | 40.0% | |
AAAGAATCAAGGAAACAGGG+AGG | - | chr6_3:83185236-83185255 | None:intergenic | 40.0% | |
CTATTACTCCAATGCCCAAT+GGG | + | chr6_3:83185516-83185535 | Msa0961470:intron | 40.0% | |
AGATCAACAAGATCAGGGAT+AGG | - | chr6_3:83185623-83185642 | None:intergenic | 40.0% | |
TTCTGCTAGGGAAGATTTGA+AGG | + | chr6_3:83185752-83185771 | Msa0961470:intron | 40.0% | |
GCTATCAACAATCTCAAGCA+AGG | + | chr6_3:83185820-83185839 | Msa0961470:intron | 40.0% | |
! | GACCGAATTTTCAGTTGCTA+AGG | - | chr6_3:83186183-83186202 | None:intergenic | 40.0% |
ATTCCACATCAGTGTGTACA+TGG | - | chr6_3:83186277-83186296 | None:intergenic | 40.0% | |
AATTCCTTCTCTGGTAGTCA+AGG | - | chr6_3:83186397-83186416 | None:intergenic | 40.0% | |
! | AGCACTGAAAATTCCTTCTC+TGG | - | chr6_3:83186406-83186425 | None:intergenic | 40.0% |
CCCAAACTTGGACAAAGATT+TGG | + | chr6_3:83186507-83186526 | Msa0961470:intron | 40.0% | |
CCCAAATCTTTGTCCAAGTT+TGG | - | chr6_3:83186511-83186530 | None:intergenic | 40.0% | |
ATCATTGGTCCACGTCTTAT+AGG | - | chr6_3:83186544-83186563 | None:intergenic | 40.0% | |
ACAAATATAGTGGCAAGTGC+TGG | - | chr6_3:83187039-83187058 | None:intergenic | 40.0% | |
TTTGTGCTCTTTGTTCTTGC+AGG | + | chr6_3:83187054-83187073 | Msa0961470:intron | 40.0% | |
TCTGATGGAGTATGTTTGTC+TGG | - | chr6_3:83187133-83187152 | None:intergenic | 40.0% | |
CTAGAATCATCGGATCGTTG+TGG | - | chr6_3:83177519-83177538 | None:intergenic | 45.0% | |
GTTTCCAAAGGAACACATCG+AGG | + | chr6_3:83177538-83177557 | Msa0961470:CDS | 45.0% | |
CTGTGTCTCGTATGGATCAA+GGG | - | chr6_3:83177598-83177617 | None:intergenic | 45.0% | |
ACTGTGTCTCGTATGGATCA+AGG | - | chr6_3:83177599-83177618 | None:intergenic | 45.0% | |
! | TATGGAGACGCCAAAGGTTT+TGG | + | chr6_3:83178166-83178185 | Msa0961470:CDS | 45.0% |
TTCAGGAATACATGAGGAGC+AGG | - | chr6_3:83178209-83178228 | None:intergenic | 45.0% | |
GATTCGGGGTTCATAACTTC+AGG | - | chr6_3:83178226-83178245 | None:intergenic | 45.0% | |
!!! | GGACACTCATTTTGAAACGG+AGG | - | chr6_3:83178397-83178416 | None:intergenic | 45.0% |
! | GTGTGCAGGGTATTAATTGG+AGG | - | chr6_3:83178499-83178518 | None:intergenic | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | + | chr6_3:83178636-83178655 | Msa0961470:intron | 45.0% |
CCACCATGACACCAAACATA+CGG | + | chr6_3:83179044-83179063 | Msa0961470:intron | 45.0% | |
!! | TCACCGTATGTTTGGTGTCA+TGG | - | chr6_3:83179050-83179069 | None:intergenic | 45.0% |
ACATACGGTGATGATATGGG+AGG | + | chr6_3:83179059-83179078 | Msa0961470:intron | 45.0% | |
AGGGTGGCATATATTTCTCC+TGG | + | chr6_3:83179123-83179142 | Msa0961470:CDS | 45.0% | |
GGGTGGCATATATTTCTCCT+GGG | + | chr6_3:83179124-83179143 | Msa0961470:CDS | 45.0% | |
CATATATTTCTCCTGGGCCT+AGG | + | chr6_3:83179130-83179149 | Msa0961470:CDS | 45.0% | |
TATATTTCTCCTGGGCCTAG+GGG | + | chr6_3:83179132-83179151 | Msa0961470:CDS | 45.0% | |
GGTCATACAACTAGCAGCTT+AGG | - | chr6_3:83179316-83179335 | None:intergenic | 45.0% | |
TATGGGTACCCTTTGGGTAT+CGG | - | chr6_3:83179781-83179800 | None:intergenic | 45.0% | |
! | GGTTTTTACCATACGTACCG+TGG | - | chr6_3:83179812-83179831 | None:intergenic | 45.0% |
!! | CTTGCCCATACTTGTTGTGA+GGG | - | chr6_3:83179833-83179852 | None:intergenic | 45.0% |
!! | ACTTGCCCATACTTGTTGTG+AGG | - | chr6_3:83179834-83179853 | None:intergenic | 45.0% |
CCTGAAGATGCTGAGGAATT+TGG | - | chr6_3:83180145-83180164 | None:intergenic | 45.0% | |
CCAAATTCCTCAGCATCTTC+AGG | + | chr6_3:83180142-83180161 | Msa0961470:intron | 45.0% | |
ATATGCTCCTGAAGATGCTG+AGG | - | chr6_3:83180152-83180171 | None:intergenic | 45.0% | |
!! | ATACCATTTGGGTTGGAGAC+TGG | - | chr6_3:83180255-83180274 | None:intergenic | 45.0% |
GGTATCATCAGAGTCAACCT+TGG | + | chr6_3:83180270-83180289 | Msa0961470:CDS | 45.0% | |
ACCATCCTGAACCAACAACA+TGG | - | chr6_3:83180336-83180355 | None:intergenic | 45.0% | |
! | TACGAGCTTTATGATCCCCT+AGG | + | chr6_3:83180393-83180412 | Msa0961470:intron | 45.0% |
GCGGATAATTCAGTACCTAG+GGG | - | chr6_3:83180411-83180430 | None:intergenic | 45.0% | |
TTATCCGCATGTGTTGTACC+AGG | + | chr6_3:83180423-83180442 | Msa0961470:intron | 45.0% | |
!! | TTCACTCTTTTGGGGATTCC+AGG | + | chr6_3:83180830-83180849 | Msa0961470:intron | 45.0% |
!! | CTCTTAGGGCATTGGTTAAG+CGG | - | chr6_3:83181163-83181182 | None:intergenic | 45.0% |
!! | AAAGAGTGCTCTTAGGGCAT+TGG | - | chr6_3:83181171-83181190 | None:intergenic | 45.0% |
GAACCCTTCACCATATAAGC+CGG | - | chr6_3:83181239-83181258 | None:intergenic | 45.0% | |
TTGGGACTCTTGCTTCTCAT+CGG | + | chr6_3:83182092-83182111 | Msa0961470:CDS | 45.0% | |
! | ATTTCTAGGCTCCTGTAAGC+AGG | - | chr6_3:83182322-83182341 | None:intergenic | 45.0% |
GAGGTTGTGATGTTGAGCAA+TGG | + | chr6_3:83182350-83182369 | Msa0961470:intron | 45.0% | |
TTCTCGAGAACCGTTCTTTC+AGG | - | chr6_3:83182567-83182586 | None:intergenic | 45.0% | |
! | TCACGAATGGCATCTAAGAC+AGG | - | chr6_3:83182925-83182944 | None:intergenic | 45.0% |
! | CGTGGAAAATTGGAGAGCAT+CGG | + | chr6_3:83183027-83183046 | Msa0961470:CDS | 45.0% |
!! | TTGGAGAGCATCGGAAAAGA+TGG | + | chr6_3:83183036-83183055 | Msa0961470:CDS | 45.0% |
GGAAGAAGATGTGCTTAACG+AGG | - | chr6_3:83185438-83185457 | None:intergenic | 45.0% | |
GCTATTACTCCAATGCCCAA+TGG | + | chr6_3:83185515-83185534 | Msa0961470:intron | 45.0% | |
TAATTGGACCCATTGGGCAT+TGG | - | chr6_3:83185527-83185546 | None:intergenic | 45.0% | |
AAGCTTATTCTTCGCCCCTA+AGG | - | chr6_3:83185579-83185598 | None:intergenic | 45.0% | |
!! | TGCAGTGTTCTAAAGCGCTA+CGG | - | chr6_3:83185653-83185672 | None:intergenic | 45.0% |
ATCTACATCATGTCCACGTG+TGG | - | chr6_3:83186250-83186269 | None:intergenic | 45.0% | |
CACATCAGTGTGTACATGGA+TGG | - | chr6_3:83186273-83186292 | None:intergenic | 45.0% | |
CATCCATGTACACACTGATG+TGG | + | chr6_3:83186271-83186290 | Msa0961470:intron | 45.0% | |
TCTGGTAGTCAAGGTTTGAG+TGG | - | chr6_3:83186388-83186407 | None:intergenic | 45.0% | |
CAAACCTTGACTACCAGAGA+AGG | + | chr6_3:83186390-83186409 | Msa0961470:intron | 45.0% | |
TGGATCTAAAGACGCATGCA+TGG | - | chr6_3:83186979-83186998 | None:intergenic | 45.0% | |
GCTGGCAAGATTTACGTTGT+TGG | - | chr6_3:83187021-83187040 | None:intergenic | 45.0% | |
TTCATAAAGGGAGGGATGCA+TGG | + | chr6_3:83187094-83187113 | Msa0961470:exon | 45.0% | |
!!! | GCTTCTGAGGTTTTGTCTGA+TGG | - | chr6_3:83187148-83187167 | None:intergenic | 45.0% |
GATTGAAACAAGGGCTTCTG+AGG | - | chr6_3:83187161-83187180 | None:intergenic | 45.0% | |
!!! | ATAATTTATTTTACTTTTTT+TGG | + | chr6_3:83178663-83178682 | Msa0961470:intron | 5.0% |
!! | ATTTAAATAATAAAGTAAAA+AGG | + | chr6_3:83179977-83179996 | Msa0961470:intron | 5.0% |
!! | ATATATATATATATATGTAT+TGG | - | chr6_3:83181532-83181551 | None:intergenic | 5.0% |
!!! | TTTTATAATATTTTGAAATT+TGG | + | chr6_3:83184355-83184374 | Msa0961470:intron | 5.0% |
!!! | TTTATAATATTTTGAAATTT+GGG | + | chr6_3:83184356-83184375 | Msa0961470:intron | 5.0% |
GTGTCCTCGATGTGTTCCTT+TGG | - | chr6_3:83177545-83177564 | None:intergenic | 50.0% | |
GGATTCGACTGTGTCTCGTA+TGG | - | chr6_3:83177606-83177625 | None:intergenic | 50.0% | |
TCTCTGTATGGAGACGCCAA+AGG | + | chr6_3:83178160-83178179 | Msa0961470:CDS | 50.0% | |
!! | CCGTATGTTTGGTGTCATGG+TGG | - | chr6_3:83179047-83179066 | None:intergenic | 50.0% |
ATATTTCTCCTGGGCCTAGG+GGG | + | chr6_3:83179133-83179152 | Msa0961470:CDS | 50.0% | |
! | GGAGACTGGCCAATTATCCT+AGG | - | chr6_3:83180241-83180260 | None:intergenic | 50.0% |
!! | GCCATGTTGTTGGTTCAGGA+TGG | + | chr6_3:83180332-83180351 | Msa0961470:intron | 50.0% |
GGTTCCTGGTACAACACATG+CGG | - | chr6_3:83180430-83180449 | None:intergenic | 50.0% | |
ATAGTACGGATACGGGTTCC+TGG | - | chr6_3:83180444-83180463 | None:intergenic | 50.0% | |
TTACGCTAACCAGTGCCCTA+AGG | + | chr6_3:83181019-83181038 | Msa0961470:intron | 50.0% | |
TACGCTAACCAGTGCCCTAA+GGG | + | chr6_3:83181020-83181039 | Msa0961470:intron | 50.0% | |
!! | TGCCCTAAGGGCACTTGATA+AGG | + | chr6_3:83181032-83181051 | Msa0961470:intron | 50.0% |
TGTCGCAGCCATTTCCATCT+AGG | + | chr6_3:83181580-83181599 | Msa0961470:intron | 50.0% | |
CAAGAGTCCCAATGCCATGA+TGG | - | chr6_3:83182084-83182103 | None:intergenic | 50.0% | |
!! | GTCATGCAGGAGAGTACTAC+AGG | + | chr6_3:83182515-83182534 | Msa0961470:intron | 50.0% |
!! | GGAGAGTACTACAGGCTGAA+TGG | + | chr6_3:83182523-83182542 | Msa0961470:intron | 50.0% |
GCTGCACGTGATCTCCAATA+AGG | - | chr6_3:83183894-83183913 | None:intergenic | 50.0% | |
ATGTGCTTAACGAGGAGCCA+TGG | - | chr6_3:83185430-83185449 | None:intergenic | 50.0% | |
ACTCCATGCAACGTGCCTTA+GGG | + | chr6_3:83185561-83185580 | Msa0961470:intron | 50.0% | |
TGTGTAGCTATAGCCACACG+TGG | + | chr6_3:83186234-83186253 | Msa0961470:intron | 50.0% | |
GGTAGAAGCTTGGCTCAACA+TGG | - | chr6_3:83186437-83186456 | None:intergenic | 50.0% | |
! | TGGTAAAAGCTGGCCTACCA+CGG | - | chr6_3:83186458-83186477 | None:intergenic | 50.0% |
TATTTCTCCTGGGCCTAGGG+GGG | + | chr6_3:83179134-83179153 | Msa0961470:CDS | 55.0% | |
TGGCCAGTCTCCAACCCAAA+TGG | + | chr6_3:83180249-83180268 | Msa0961470:CDS | 55.0% | |
GGCAGGCATCTTGCAAACAG+TGG | - | chr6_3:83180611-83180630 | None:intergenic | 55.0% | |
ATCAAGTGCCCTTAGGGCAC+TGG | - | chr6_3:83181031-83181050 | None:intergenic | 55.0% | |
CTAGGCTCCTGTAAGCAGGA+TGG | - | chr6_3:83182318-83182337 | None:intergenic | 55.0% | |
AGGCTCATCCTCATCCAGCA+AGG | - | chr6_3:83182905-83182924 | None:intergenic | 55.0% | |
CACTCCATGCAACGTGCCTT+AGG | + | chr6_3:83185560-83185579 | Msa0961470:intron | 55.0% | |
CTCCATGCAACGTGCCTTAG+GGG | + | chr6_3:83185562-83185581 | Msa0961470:intron | 55.0% | |
GTTGAGCCAAGCTTCTACCG+TGG | + | chr6_3:83186438-83186457 | Msa0961470:intron | 55.0% | |
AGCCAAGCTTCTACCGTGGT+AGG | + | chr6_3:83186442-83186461 | Msa0961470:intron | 55.0% | |
TTCGGCTGTCTCCCCAAACT+TGG | + | chr6_3:83186495-83186514 | Msa0961470:intron | 55.0% | |
GAACTTCGGCGATCCCACAA+CGG | - | chr6_3:83187323-83187342 | None:intergenic | 55.0% | |
CACGGCATTTCGTCGCAGTC+AGG | + | chr6_3:83181454-83181473 | Msa0961470:intron | 60.0% | |
GGCCTACCACGGTAGAAGCT+TGG | - | chr6_3:83186447-83186466 | None:intergenic | 60.0% | |
TGTATGGCCACCGTCCGTTG+TGG | + | chr6_3:83187306-83187325 | Msa0961470:three_prime_UTR | 60.0% | |
GTATGGCCACCGTCCGTTGT+GGG | + | chr6_3:83187307-83187326 | Msa0961470:three_prime_UTR | 60.0% | |
TTCGGCGATCCCACAACGGA+CGG | - | chr6_3:83187319-83187338 | None:intergenic | 60.0% | |
TCTCCAGCACCAACCCCCCT+AGG | - | chr6_3:83179150-83179169 | None:intergenic | 65.0% | |
CGCCCCTAAGGCACGTTGCA+TGG | - | chr6_3:83185567-83185586 | None:intergenic | 65.0% | |
TCTCCTGGGCCTAGGGGGGT+TGG | + | chr6_3:83179138-83179157 | Msa0961470:CDS | 70.0% | |
GGCGATCCCACAACGGACGG+TGG | - | chr6_3:83187316-83187335 | None:intergenic | 70.0% | |
GCACCAACCCCCCTAGGCCC+AGG | - | chr6_3:83179144-83179163 | None:intergenic | 75.0% | |
!! | GGGCCTAGGGGGGTTGGTGC+TGG | + | chr6_3:83179144-83179163 | Msa0961470:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 83177453 | 83187344 | 83177453 | ID=Msa0961470;Name=Msa0961470 |
chr6_3 | mRNA | 83177453 | 83187344 | 83177453 | ID=Msa0961470-mRNA-1;Parent=Msa0961470;Name=Msa0961470-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.3|0.54|1|0.3|0.54|11|244|534 |
chr6_3 | exon | 83177453 | 83177626 | 83177453 | ID=Msa0961470-mRNA-1:exon:14865;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83178151 | 83178303 | 83178151 | ID=Msa0961470-mRNA-1:exon:14866;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83179120 | 83179257 | 83179120 | ID=Msa0961470-mRNA-1:exon:14867;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83180211 | 83180336 | 83180211 | ID=Msa0961470-mRNA-1:exon:14868;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83180600 | 83180824 | 83180600 | ID=Msa0961470-mRNA-1:exon:14869;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83182014 | 83182150 | 83182014 | ID=Msa0961470-mRNA-1:exon:14870;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83182524 | 83182644 | 83182524 | ID=Msa0961470-mRNA-1:exon:14871;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83182916 | 83183141 | 83182916 | ID=Msa0961470-mRNA-1:exon:14872;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83183505 | 83183667 | 83183505 | ID=Msa0961470-mRNA-1:exon:14873;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83183881 | 83183997 | 83183881 | ID=Msa0961470-mRNA-1:exon:14874;Parent=Msa0961470-mRNA-1 |
chr6_3 | exon | 83187076 | 83187344 | 83187076 | ID=Msa0961470-mRNA-1:exon:14875;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83177453 | 83177626 | 83177453 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83178151 | 83178303 | 83178151 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83179120 | 83179257 | 83179120 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83180211 | 83180336 | 83180211 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83180600 | 83180824 | 83180600 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83182014 | 83182150 | 83182014 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83182524 | 83182644 | 83182524 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83182916 | 83183141 | 83182916 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83183505 | 83183667 | 83183505 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83183881 | 83183997 | 83183881 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | CDS | 83187076 | 83187100 | 83187076 | ID=Msa0961470-mRNA-1:cds;Parent=Msa0961470-mRNA-1 |
chr6_3 | three_prime_UTR | 83187101 | 83187344 | 83187101 | ID=Msa0961470-mRNA-1:three_prime_utr;Parent=Msa0961470-mRNA-1 |
Gene Sequence |
Protein sequence |