AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0996140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996140 MtrunA17_Chr6g0480771 92.754 138 10 0 1 138 133 270 2.80e-93 271
Msa0996140 MtrunA17_Chr6g0480841 76.812 138 32 0 1 138 72 209 1.69e-74 221
Msa0996140 MtrunA17_Chr6g0480781 77.778 135 30 0 1 135 610 744 7.61e-67 216
Msa0996140 MtrunA17_Chr6g0480851 75.000 136 34 0 1 136 625 760 1.88e-61 201
Msa0996140 MtrunA17_Chr6g0480681 73.723 137 36 0 1 137 578 714 1.02e-59 196
Msa0996140 MtrunA17_Chr6g0480741 68.750 128 40 0 3 130 555 682 9.29e-50 168
Msa0996140 MtrunA17_Chr5g0395421 75.000 108 24 1 1 105 256 363 3.96e-47 156
Msa0996140 MtrunA17_Chr6g0481021 66.116 121 41 0 1 121 569 689 5.00e-45 155
Msa0996140 MtrunA17_Chr6g0480671 60.150 133 53 0 3 135 636 768 3.64e-43 150
Msa0996140 MtrunA17_Chr4g0001481 39.837 123 57 3 1 117 548 659 4.72e-17 76.6
Msa0996140 MtrunA17_Chr4g0073941 40.945 127 58 3 1 121 543 658 7.56e-17 76.3
Msa0996140 MtrunA17_Chr7g0275581 37.398 123 61 3 1 117 526 638 1.08e-16 75.5
Msa0996140 MtrunA17_Chr3g0139071 36.620 142 73 4 1 136 521 651 2.21e-16 74.7
Msa0996140 MtrunA17_Chr2g0305771 39.370 127 60 4 1 121 491 606 4.89e-16 73.9
Msa0996140 MtrunA17_Chr3g0125651 37.795 127 62 3 1 121 483 598 8.82e-16 73.2
Msa0996140 MtrunA17_Chr7g0228181 38.583 127 61 3 1 121 491 606 2.78e-15 71.6
Msa0996140 MtrunA17_Chr3g0126541 37.008 127 63 3 1 121 521 636 6.78e-14 67.8
Msa0996140 MtrunA17_Chr2g0318561 35.484 124 66 3 1 120 335 448 1.67e-13 66.2
Msa0996140 MtrunA17_Chr8g0360821 34.677 124 67 4 1 120 512 625 1.64e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996140 AT3G17690.1 51.408 142 57 2 1 142 597 726 1.99e-36 132
Msa0996140 AT3G17700.1 51.128 133 65 0 1 133 630 762 3.19e-36 131
Msa0996140 AT1G19780.2 43.902 123 52 3 1 117 334 445 1.19e-19 84.3
Msa0996140 AT1G19780.1 43.902 123 52 3 1 117 545 656 1.58e-19 84.3
Msa0996140 AT1G15990.1 41.732 127 57 3 1 121 539 654 3.61e-19 83.2
Msa0996140 AT4G30560.5 42.520 127 56 3 1 121 524 639 3.88e-18 80.1
Msa0996140 AT4G30560.2 42.520 127 56 3 1 121 524 639 3.88e-18 80.1
Msa0996140 AT4G30560.3 42.520 127 56 3 1 121 524 639 3.88e-18 80.1
Msa0996140 AT4G30560.1 42.520 127 56 3 1 121 550 665 4.25e-18 80.1
Msa0996140 AT4G30560.4 42.520 127 56 3 1 121 550 665 4.25e-18 80.1
Msa0996140 AT2G23980.6 41.732 127 57 3 1 121 524 639 8.59e-18 79.3
Msa0996140 AT2G23980.3 41.732 127 57 3 1 121 574 689 8.75e-18 79.3
Msa0996140 AT2G23980.2 41.732 127 57 3 1 121 574 689 8.75e-18 79.3
Msa0996140 AT2G23980.8 41.732 127 57 3 1 121 574 689 8.75e-18 79.3
Msa0996140 AT2G23980.7 41.732 127 57 3 1 121 574 689 8.75e-18 79.3
Msa0996140 AT2G23980.9 41.732 127 57 3 1 121 551 666 9.24e-18 79.0
Msa0996140 AT2G23980.10 41.732 127 57 3 1 121 551 666 9.24e-18 79.0
Msa0996140 AT2G23980.1 41.732 127 57 3 1 121 551 666 9.24e-18 79.0
Msa0996140 AT2G23980.4 41.732 127 57 3 1 121 551 666 9.24e-18 79.0
Msa0996140 AT2G23980.5 41.732 127 57 3 1 121 551 666 9.24e-18 79.0
Msa0996140 AT5G57940.3 42.188 128 55 4 1 121 528 643 1.97e-17 78.2
Msa0996140 AT5G57940.1 42.188 128 55 4 1 121 535 650 2.11e-17 78.2
Msa0996140 AT5G57940.2 42.188 128 55 4 1 121 535 650 2.11e-17 78.2
Msa0996140 AT4G30360.1 37.037 135 68 4 1 129 518 641 1.75e-15 72.4
Msa0996140 AT2G24610.2 39.370 127 60 4 1 121 533 648 8.09e-15 70.9
Msa0996140 AT2G24610.1 39.370 127 60 4 1 121 518 633 8.80e-15 70.5
Msa0996140 AT4G01010.1 39.024 123 58 4 1 117 511 622 9.00e-15 70.5
Msa0996140 AT4G01010.2 39.024 123 58 4 1 117 511 622 9.00e-15 70.5
Msa0996140 AT3G48010.1 37.008 127 63 3 1 121 494 609 8.08e-14 67.8
Msa0996140 AT5G14870.1 35.433 127 65 4 1 121 486 601 8.32e-14 67.8
Msa0996140 AT5G53130.1 38.211 123 59 3 1 117 523 634 1.02e-13 67.4
Msa0996140 AT5G54250.2 36.290 124 65 3 1 120 533 646 1.17e-13 67.4
Msa0996140 AT5G54250.1 36.290 124 65 3 1 120 533 646 1.17e-13 67.4
Msa0996140 AT5G54250.4 36.290 124 65 3 1 120 533 646 1.17e-13 67.4
Msa0996140 AT5G54250.3 36.290 124 65 3 1 120 528 641 1.21e-13 67.4

Find 142 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGATGCTGAGGAATT+TGG 0.168927 6_4:-73805186 None:intergenic
AATTTGCTTTGTTGCCATTT+TGG 0.171505 6_4:+73803640 Msa0996140:five_prime_UTR
AATATGTGTATTCACTCTTT+TGG 0.175354 6_4:+73805864 Msa0996140:five_prime_UTR
AATCCAATTAATATTCTATT+TGG 0.194730 6_4:-73811193 None:intergenic
TTCTCGAGAACCGTTCTTTC+AGG 0.219309 6_4:-73807585 None:intergenic
AGAGATACAGGACATCAATT+AGG 0.228012 6_4:-73803868 None:intergenic
CTTATATTTCTCCTGGGTCT+AGG 0.232256 6_4:+73804187 Msa0996140:five_prime_UTR
TTTCTAAGTATAATAATCTT+AGG 0.251795 6_4:+73805228 Msa0996140:five_prime_UTR
TTAGGTATGAATCACCTTAT+TGG 0.252510 6_4:+73809248 Msa0996140:intron
TATGGAGACGCCAAAGGTTT+TGG 0.265806 6_4:+73803524 Msa0996140:five_prime_UTR
GTACCAAATAGAATATTAAT+TGG 0.266974 6_4:+73811190 Msa0996140:three_prime_UTR
TCATACATTCTGAGATCTTC+TGG 0.272956 6_4:-73807412 None:intergenic
TATCATCAGAGTCATGTTTA+AGG 0.280779 6_4:+73805316 Msa0996140:five_prime_UTR
TTTAGCCATGTTGTTGGTTC+AGG 0.281258 6_4:+73805372 Msa0996140:five_prime_UTR
CTTTGAGTTCCTCTTTAATC+AGG 0.315455 6_4:+73802398 Msa0996140:five_prime_UTR
AAACATTATTTAAGTTGAAT+TGG 0.318728 6_4:+73802350 Msa0996140:five_prime_UTR
AACCTCTATACATCATTTCT+AGG 0.321424 6_4:-73807354 None:intergenic
TTATATTTCTCCTGGGTCTA+GGG 0.324039 6_4:+73804188 Msa0996140:five_prime_UTR
CTTATCATTTCTCCATACTA+TGG 0.324096 6_4:-73805744 None:intergenic
AATGGCAACAAAGCAAATTA+TGG 0.327497 6_4:-73803636 None:intergenic
TACTTCAATTTATATTCATA+TGG 0.338076 6_4:+73802927 Msa0996140:five_prime_UTR
ACACATATGGAACAAGGTTT+TGG 0.342347 6_4:+73803613 Msa0996140:five_prime_UTR
GTCACAACGATTATTCATAA+AGG 0.345325 6_4:+73811067 Msa0996140:CDS
TTATCCGAAGGGGATGCTTT+TGG 0.347928 6_4:+73808087 Msa0996140:CDS
TGAATATATCAGCCATAGTA+TGG 0.351240 6_4:+73805732 Msa0996140:five_prime_UTR
GTAGTTAAGAGCAATCATTT+TGG 0.357273 6_4:-73804241 None:intergenic
AAATAAGGGATCAACCAAAA+TGG 0.360882 6_4:-73803654 None:intergenic
CCAAATTCCTCAGCATCTTC+AGG 0.363749 6_4:+73805186 Msa0996140:five_prime_UTR
ATAAATGTCTTGTTACCAAT+TGG 0.369653 6_4:+73803813 Msa0996140:five_prime_UTR
GAGATACAGGACATCAATTA+GGG 0.373753 6_4:-73803867 None:intergenic
TATAACGTCGTATGTCTATC+TGG 0.374098 6_4:-73807623 None:intergenic
TATGTGTACAACTTTAGATT+CGG 0.374568 6_4:-73803597 None:intergenic
GCTGCACGTGATCTCCAATA+AGG 0.383559 6_4:-73809262 None:intergenic
ATGACTCTGATGATACCATT+TGG 0.383593 6_4:-73805308 None:intergenic
GATTCGGGGTTCATAACTTC+AGG 0.390153 6_4:-73803581 None:intergenic
ATGTTCTTTAGCCATGTTGT+TGG 0.392927 6_4:+73805366 Msa0996140:five_prime_UTR
ATGTGTACAACTTTAGATTC+GGG 0.405182 6_4:-73803596 None:intergenic
TCTGATGGAGTATGTTTGTC+TGG 0.407880 6_4:-73811116 None:intergenic
TCACAACGATTATTCATAAA+GGG 0.407902 6_4:+73811068 Msa0996140:exon
CACCTAGTTTCTTTAGTAAG+TGG 0.408012 6_4:-73805833 None:intergenic
AATCTAAAGTTGTACACATA+TGG 0.415645 6_4:+73803600 Msa0996140:five_prime_UTR
TGACAGGCTTATATTTCTCC+TGG 0.428676 6_4:+73804180 Msa0996140:five_prime_UTR
TACAATGTCCATCATGGCAT+TGG 0.431782 6_4:+73807093 Msa0996140:five_prime_UTR
CATAGTATGGAGAAATGATA+AGG 0.432716 6_4:+73805745 Msa0996140:five_prime_UTR
AAATTCCAAGCTATTATTTG+TGG 0.433178 6_4:+73807059 Msa0996140:five_prime_UTR
ATACCATTTGGGTTGGAGAC+TGG 0.436563 6_4:-73805296 None:intergenic
CATCGGAAAAGATGGAATTC+CGG 0.439978 6_4:+73808059 Msa0996140:CDS
GTGTCCTCGATGTGTTCCTT+TGG 0.440295 6_4:-73802900 None:intergenic
TTCAACTATATTTGATTCCA+AGG 0.444757 6_4:+73803017 Msa0996140:five_prime_UTR
TTGGTGAAGAGCTTCTAATA+TGG 0.448642 6_4:+73808106 Msa0996140:CDS
TATTGCATTACCTCTTCCTC+AGG 0.448920 6_4:+73804293 Msa0996140:five_prime_UTR
TAAGAATGTTCAAGAGATAC+AGG 0.450686 6_4:-73803880 None:intergenic
ATGGTATCTCTTTGCTCTAC+AGG 0.450779 6_4:+73805395 Msa0996140:five_prime_UTR
AATGTGTATATCTCAATGTA+TGG 0.466862 6_4:+73811276 Msa0996140:three_prime_UTR
GGTAAAGAAGCAAAGATTCA+AGG 0.467196 6_4:+73808509 Msa0996140:CDS
TCCCCTTCGGATAACAAAAC+CGG 0.468070 6_4:-73808078 None:intergenic
TGACTCTGATGATACCATTT+GGG 0.471836 6_4:-73805307 None:intergenic
TCTTGTTACCAATTGGAAAA+CGG 0.473745 6_4:+73803820 Msa0996140:five_prime_UTR
TATATTTCTCCTGGGTCTAG+GGG 0.474641 6_4:+73804189 Msa0996140:five_prime_UTR
ATGTTTGTCTGGTACATTCA+AGG 0.476687 6_4:-73811105 None:intergenic
GGATTCGACTGTGTCTCATA+TGG 0.480543 6_4:-73802961 None:intergenic
ACAATGTCCATCATGGCATT+GGG 0.480702 6_4:+73807094 Msa0996140:five_prime_UTR
TTAGAGAGCATCGGAAAAGA+TGG 0.483233 6_4:+73808051 Msa0996140:CDS
CTCACGTTCAACAAGTCATA+AGG 0.484138 6_4:+73808648 Msa0996140:CDS
ACTTGTTTGAATGCCACATC+TGG 0.484399 6_4:+73805776 Msa0996140:five_prime_UTR
CAGCAAATCATTACTCTGGC+TGG 0.488801 6_4:+73807031 Msa0996140:intron
AATTCCAAGCTATTATTTGT+GGG 0.489115 6_4:+73807060 Msa0996140:five_prime_UTR
ATTACAGCAAATCATTACTC+TGG 0.490097 6_4:+73807027 Msa0996140:intron
CAGTTACGAAATTCTCTGTA+TGG 0.491809 6_4:+73803506 Msa0996140:intron
GATCTTCTGGTAAGCGATGA+TGG 0.494946 6_4:-73807399 None:intergenic
TTTAGTAAGTGGTATAGCAT+TGG 0.496798 6_4:-73805822 None:intergenic
GGAGAGTACTACGGGCTGAA+TGG 0.498316 6_4:+73807544 Msa0996140:intron
ATAGTATGGAGAAATGATAA+GGG 0.498973 6_4:+73805746 Msa0996140:five_prime_UTR
ACGTGCAGCAAAGATAATTC+AGG 0.501673 6_4:+73809276 Msa0996140:CDS
TTCAGGAATACATGAAGAGC+AGG 0.504109 6_4:-73803564 None:intergenic
TTAATTGTGATTCTAAAGCT+AGG 0.507934 6_4:+73805708 Msa0996140:five_prime_UTR
GATTGAAACAAGGGCTTCTG+AGG 0.509017 6_4:-73811144 None:intergenic
AAGAAATGTACCTGAGGAAG+AGG 0.512197 6_4:-73804303 None:intergenic
TTCACCAAAAGCATCCCCTT+CGG 0.512380 6_4:-73808091 None:intergenic
GACAGGCTTATATTTCTCCT+GGG 0.517050 6_4:+73804181 Msa0996140:five_prime_UTR
ATCCATGTAGATTAGAATGA+TGG 0.518350 6_4:-73805673 None:intergenic
AAAGGGAGGCGGCTGAACTT+CGG 0.518433 6_4:-73811320 None:intergenic
AGAATAAAACCTGATTAAAG+AGG 0.521193 6_4:-73802407 None:intergenic
ACTGTGTCTCATATGGATCA+AGG 0.521479 6_4:-73802954 None:intergenic
TTGGGACTCTTGCTTCTCAT+CGG 0.527508 6_4:+73807112 Msa0996140:five_prime_UTR
ATATTTCTCCTGGGTCTAGG+GGG 0.528029 6_4:+73804190 Msa0996140:five_prime_UTR
TATTTCTCCTGGGTCTAGGG+GGG 0.528203 6_4:+73804191 Msa0996140:five_prime_UTR
GCCATGTTGTTGGTTCAGGA+TGG 0.531623 6_4:+73805376 Msa0996140:five_prime_UTR
AGCCTAGAAATGATGTATAG+AGG 0.532914 6_4:+73807352 Msa0996140:five_prime_UTR
TGGCCAGTCTCCAACCCAAA+TGG 0.534053 6_4:+73805293 Msa0996140:five_prime_UTR
CAAGAGTCCCAATGCCATGA+TGG 0.535332 6_4:-73807101 None:intergenic
TGTTTGTCTGGTACATTCAA+GGG 0.536326 6_4:-73811104 None:intergenic
TGCCATCATTCTAATCTACA+TGG 0.536749 6_4:+73805671 Msa0996140:five_prime_UTR
TCACGAATGGCATCTAAGAC+AGG 0.538157 6_4:-73807938 None:intergenic
CAAAGATAATTCAGGATGCA+TGG 0.538439 6_4:+73809284 Msa0996140:CDS
CCTTTGGAAACTAGAATCAT+CGG 0.542649 6_4:-73802884 None:intergenic
GGAGACTGGCCAATTATCCT+AGG 0.543288 6_4:-73805282 None:intergenic
ACTTCCCACAAATAATAGCT+TGG 0.545224 6_4:-73807064 None:intergenic
TGTATGGCCACCGTCTGTTG+TGG 0.546601 6_4:+73811292 Msa0996140:three_prime_UTR
CCTCTTTACAATGTCCATCA+TGG 0.549712 6_4:+73807087 Msa0996140:five_prime_UTR
TTCTAATCTACATGGATGCA+TGG 0.550300 6_4:+73805679 Msa0996140:five_prime_UTR
GTCATGCAGGAGAGTACTAC+GGG 0.554466 6_4:+73807536 Msa0996140:intron
TTCATAAAGGGAGGGATGCA+TGG 0.559222 6_4:+73811080 Msa0996140:exon
GGATGTGTTTCTGACAGAAT+CGG 0.559297 6_4:-73802853 None:intergenic
GTATGGCCACCGTCTGTTGT+GGG 0.566155 6_4:+73811293 Msa0996140:three_prime_UTR
TCTGATGATACCATTTGGGT+TGG 0.570225 6_4:-73805303 None:intergenic
CTGTGTCTCATATGGATCAA+GGG 0.580155 6_4:-73802953 None:intergenic
TTCTTCGAACTCTTAGCAAG+AGG 0.581508 6_4:+73807149 Msa0996140:five_prime_UTR
CAAAGATAAAGTCATTATTG+AGG 0.582605 6_4:-73804263 None:intergenic
TACGGGCTGAATGGAATAGT+CGG 0.585125 6_4:+73807553 Msa0996140:five_prime_UTR
TGTCATGCAGGAGAGTACTA+CGG 0.585907 6_4:+73807535 Msa0996140:intron
CAACGATTATTCATAAAGGG+AGG 0.586371 6_4:+73811071 Msa0996140:exon
AGTAAAATGCTTAACCGATG+TGG 0.586699 6_4:+73808556 Msa0996140:CDS
AAATGTGGTGATTGAAACAA+GGG 0.588065 6_4:-73811153 None:intergenic
ATGTAGATTAGAATGATGGC+AGG 0.588078 6_4:-73805669 None:intergenic
CGTGGAAAATTAGAGAGCAT+CGG 0.588200 6_4:+73808042 Msa0996140:CDS
ATTCTCATTCTATGTGAACA+AGG 0.598693 6_4:+73803679 Msa0996140:five_prime_UTR
GCATAATGCTCCTGAAAGAA+CGG 0.604538 6_4:+73807575 Msa0996140:five_prime_UTR
CCATGATGGACATTGTAAAG+AGG 0.606570 6_4:-73807087 None:intergenic
GAAGAGTCTTCTGAAAGCAA+AGG 0.608511 6_4:+73808135 Msa0996140:CDS
GAAGCAAAGATTCAAGGACA+TGG 0.611232 6_4:+73808515 Msa0996140:CDS
TTCGGCGATCCCACAACAGA+CGG 0.611848 6_4:-73811302 None:intergenic
AACGATTATTCATAAAGGGA+GGG 0.612130 6_4:+73811072 Msa0996140:exon
AAAATGATTATCAAACATTG+AGG 0.612466 6_4:+73809347 Msa0996140:CDS
ATATGCTCCTGAAGATGCTG+AGG 0.613550 6_4:-73805193 None:intergenic
CCGATGATTCTAGTTTCCAA+AGG 0.618061 6_4:+73802884 Msa0996140:five_prime_UTR
CTAGAATCATCGGATCGTTG+TGG 0.620647 6_4:-73802874 None:intergenic
TGTGTACAACTTTAGATTCG+GGG 0.627373 6_4:-73803595 None:intergenic
GTTGACATATCCACTATGAC+AGG 0.629240 6_4:+73804164 Msa0996140:intron
AAAATGTGGTGATTGAAACA+AGG 0.633171 6_4:-73811154 None:intergenic
TACCACTTACTAAAGAAACT+AGG 0.634735 6_4:+73805831 Msa0996140:five_prime_UTR
CTTATGACTTGTTGAACGTG+AGG 0.637470 6_4:-73808647 None:intergenic
AGTTGTACACATATGGAACA+AGG 0.640811 6_4:+73803607 Msa0996140:five_prime_UTR
AGGCTCATCCTCATCCAGCA+AGG 0.642052 6_4:-73807918 None:intergenic
GAGGTTGTGATGTTGAGCAA+TGG 0.642864 6_4:+73807371 Msa0996140:five_prime_UTR
AAAATGCTTAACCGATGTGG+AGG 0.648267 6_4:+73808559 Msa0996140:CDS
ACCATCCTGAACCAACAACA+TGG 0.659834 6_4:-73805377 None:intergenic
TCTCTGTATGGAGACGCCAA+AGG 0.669806 6_4:+73803518 Msa0996140:five_prime_UTR
AAGTGAAAATGCCTCCACAT+CGG 0.676369 6_4:-73808570 None:intergenic
GGCGATCCCACAACAGACGG+TGG 0.692776 6_4:-73811299 None:intergenic
GGCAGGCATCTTGCAAACAG+TGG 0.718744 6_4:-73805652 None:intergenic
GTTTCCAAAGGAACACATCG+AGG 0.725939 6_4:+73802896 Msa0996140:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAATAGTATAATTTA+TGG + chr6_4:73803112-73803131 Msa0996140:intron 10.0%
!! AATAATTGATCATATTAATA+TGG - chr6_4:73803229-73803248 None:intergenic 10.0%
!! TAAAATTAGAAATATTGTAT+TGG - chr6_4:73806155-73806174 None:intergenic 10.0%
!!! TAATTATGAATGAATTTTAT+TGG - chr6_4:73809514-73809533 None:intergenic 10.0%
!! AACAAACAAATTAAATTAAA+AGG - chr6_4:73810530-73810549 None:intergenic 10.0%
!!! AAACATTATTTAAGTTGAAT+TGG + chr6_4:73802350-73802369 Msa0996140:five_prime_UTR 15.0%
!! TACTTCAATTTATATTCATA+TGG + chr6_4:73802927-73802946 Msa0996140:five_prime_UTR 15.0%
!! TAGTATAATTTATGGATATT+TGG + chr6_4:73803120-73803139 Msa0996140:intron 15.0%
!! TAGAATGAGAATAAAAATAA+GGG - chr6_4:73803671-73803690 None:intergenic 15.0%
!! ATAGAATGAGAATAAAAATA+AGG - chr6_4:73803672-73803691 None:intergenic 15.0%
!!! GATTTTACAAAGTAAATAAA+AGG - chr6_4:73803717-73803736 None:intergenic 15.0%
!!! TAGTTAAATCACTTTAAAAT+TGG - chr6_4:73804923-73804942 None:intergenic 15.0%
!! TATATTTCCTTTGTATATAT+AGG + chr6_4:73805109-73805128 Msa0996140:intron 15.0%
!!! ATTAATACTTTGTGAAATTT+TGG + chr6_4:73805139-73805158 Msa0996140:intron 15.0%
!! TTTCTAAGTATAATAATCTT+AGG + chr6_4:73805228-73805247 Msa0996140:five_prime_UTR 15.0%
!!! TTCTAAAAAACTGTTTATTA+CGG + chr6_4:73805942-73805961 Msa0996140:intron 15.0%
!!! ATTTGATTTTATAGAAGAAA+CGG - chr6_4:73806371-73806390 None:intergenic 15.0%
!!! ATGGTTTCTTTTTTTTTTTT+TGG - chr6_4:73806427-73806446 None:intergenic 15.0%
!! TATTCCTCAAAAAAAAAAAA+AGG + chr6_4:73806643-73806662 Msa0996140:intron 15.0%
!!! GAATTTTAAATTTGAATTCA+TGG - chr6_4:73807307-73807326 None:intergenic 15.0%
!! AAAATGCATATTTCAATAAA+TGG + chr6_4:73807474-73807493 Msa0996140:intron 15.0%
!!! TAATTACTTGCTTTAAAATT+TGG + chr6_4:73809528-73809547 Msa0996140:intron 15.0%
!! AAAATATGTTTATAAGTGAT+GGG - chr6_4:73809603-73809622 None:intergenic 15.0%
!! AAAAATATGTTTATAAGTGA+TGG - chr6_4:73809604-73809623 None:intergenic 15.0%
!! ATAAAATATCTTATCAATGA+TGG - chr6_4:73810378-73810397 None:intergenic 15.0%
!!! AATTTGTTTGTTAAAGTTAA+TGG + chr6_4:73810538-73810557 Msa0996140:intron 15.0%
!! AATCCAATTAATATTCTATT+TGG - chr6_4:73811196-73811215 None:intergenic 15.0%
!!! TTTTAAATTAAGATTGCAAC+TGG - chr6_4:73802549-73802568 None:intergenic 20.0%
!!! AGTCATTTTCTTTCATTATA+AGG - chr6_4:73802602-73802621 None:intergenic 20.0%
!!! TCTTTATAAATTTGTTGAGA+TGG + chr6_4:73802750-73802769 Msa0996140:intron 20.0%
!! AAATAAAAATGAACACTTGT+TGG + chr6_4:73802990-73803009 Msa0996140:five_prime_UTR 20.0%
!! AATAAAAATGAACACTTGTT+GGG + chr6_4:73802991-73803010 Msa0996140:five_prime_UTR 20.0%
!! TATAATTTATGGATATTTGG+TGG + chr6_4:73803123-73803142 Msa0996140:intron 20.0%
!! TAAGTATTATGAAAAGTTGT+TGG - chr6_4:73803345-73803364 None:intergenic 20.0%
!! TTTCATAATACTTATGATGT+CGG + chr6_4:73803351-73803370 Msa0996140:intron 20.0%
!!! TTTGGGTTTTAAAAATAACA+TGG - chr6_4:73804338-73804357 None:intergenic 20.0%
!!! TTCAACAAAAAGTATATTCA+TGG - chr6_4:73804394-73804413 None:intergenic 20.0%
!! TGCTACTAACAAAATATAAA+TGG + chr6_4:73804516-73804535 Msa0996140:intron 20.0%
!! AAAATATAAATGGAAACCAA+AGG + chr6_4:73804526-73804545 Msa0996140:intron 20.0%
!! AAAGATGATGCAAATTATAA+GGG - chr6_4:73804693-73804712 None:intergenic 20.0%
!! AAAAGATGATGCAAATTATA+AGG - chr6_4:73804694-73804713 None:intergenic 20.0%
!! ATCTATACCTATATATACAA+AGG - chr6_4:73805119-73805138 None:intergenic 20.0%
!! TCAATTCAATATATGTAGTA+CGG - chr6_4:73805501-73805520 None:intergenic 20.0%
!!! GCTATTAGCTTTTTTTTATA+GGG + chr6_4:73806013-73806032 Msa0996140:intron 20.0%
!! AGAAATATTGTATTGGAAAA+TGG - chr6_4:73806148-73806167 None:intergenic 20.0%
!!! CATTTTCCTTTTTTTTACAT+TGG + chr6_4:73806209-73806228 Msa0996140:intron 20.0%
!!! GGATTAATTAAAAGTATGAA+AGG - chr6_4:73806350-73806369 None:intergenic 20.0%
!!! CTTTTTTTTTTTTTGGTAGA+TGG - chr6_4:73806420-73806439 None:intergenic 20.0%
!!! TTTTGTTTACTTTGTCAAAA+CGG + chr6_4:73806502-73806521 Msa0996140:intron 20.0%
!! CAAAACCTATATATATGTAT+TGG - chr6_4:73806549-73806568 None:intergenic 20.0%
!!! GTATCCTTTTTTTTTTTTTG+AGG - chr6_4:73806650-73806669 None:intergenic 20.0%
!! TATGCAACAAATTAACTAAT+TGG - chr6_4:73806764-73806783 None:intergenic 20.0%
!!! TTTTTTCATTCTACTTCTAT+TGG - chr6_4:73807770-73807789 None:intergenic 20.0%
!! TAGTTATCTGTCTTATAATT+TGG + chr6_4:73808815-73808834 Msa0996140:intron 20.0%
!! TTGAAATTTGTGTTTATAAG+TGG - chr6_4:73808889-73808908 None:intergenic 20.0%
!!! TGGTTTTGATAATAGATATT+AGG - chr6_4:73809193-73809212 None:intergenic 20.0%
!! AAAATGATTATCAAACATTG+AGG + chr6_4:73809347-73809366 Msa0996140:CDS 20.0%
!! ATATAATGCAGTTAATCATA+GGG - chr6_4:73809429-73809448 None:intergenic 20.0%
!! AATATAATGCAGTTAATCAT+AGG - chr6_4:73809430-73809449 None:intergenic 20.0%
!! GAATGAATTACTTATCAATA+GGG - chr6_4:73809639-73809658 None:intergenic 20.0%
!! TGAATGAATTACTTATCAAT+AGG - chr6_4:73809640-73809659 None:intergenic 20.0%
!!! GAAAAAAAAAAAAGCATCAA+TGG - chr6_4:73809890-73809909 None:intergenic 20.0%
!!! ATTATTGACAAGTCATTTTT+CGG + chr6_4:73810283-73810302 Msa0996140:intron 20.0%
!!! TTTAAGTCAAAATTGCTTTT+AGG + chr6_4:73810452-73810471 Msa0996140:intron 20.0%
!!! CAATTCTAGTTTTTGTTAAA+CGG + chr6_4:73810772-73810791 Msa0996140:intron 20.0%
!! GTACCAAATAGAATATTAAT+TGG + chr6_4:73811190-73811209 Msa0996140:three_prime_UTR 20.0%
! AGAATAAAACCTGATTAAAG+AGG - chr6_4:73802410-73802429 None:intergenic 25.0%
! AATGAAAGAAAATGACTTCT+TGG + chr6_4:73802605-73802624 Msa0996140:intron 25.0%
!! TTTAGCTCAAAACTTTCAAA+AGG - chr6_4:73802720-73802739 None:intergenic 25.0%
!!! TTGAAAGTTTTGAGCTAAAT+TGG + chr6_4:73802721-73802740 Msa0996140:intron 25.0%
!! TTATGTTTTCAGAATCATCA+AGG + chr6_4:73802799-73802818 Msa0996140:intron 25.0%
!!! TGTTCATTTTTATTTGTGAC+AGG - chr6_4:73802985-73803004 None:intergenic 25.0%
!! ATAAAAATGAACACTTGTTG+GGG + chr6_4:73802992-73803011 Msa0996140:five_prime_UTR 25.0%
! TTCAACTATATTTGATTCCA+AGG + chr6_4:73803017-73803036 Msa0996140:five_prime_UTR 25.0%
! TAATATAGACTTCCTATGTT+TGG + chr6_4:73803055-73803074 Msa0996140:intron 25.0%
! AGATAATCTTATACTCCTTT+AGG - chr6_4:73803161-73803180 None:intergenic 25.0%
! GTAAAGTAGTCTGATAAAAA+TGG + chr6_4:73803373-73803392 Msa0996140:intron 25.0%
! TATGTGTACAACTTTAGATT+CGG - chr6_4:73803600-73803619 None:intergenic 25.0%
!! AATCTAAAGTTGTACACATA+TGG + chr6_4:73803600-73803619 Msa0996140:five_prime_UTR 25.0%
!! ATAAATGTCTTGTTACCAAT+TGG + chr6_4:73803813-73803832 Msa0996140:five_prime_UTR 25.0%
! AGCACAAATTAAATCAGAAA+AGG - chr6_4:73803929-73803948 None:intergenic 25.0%
!!! ATCGTGATTTTTCAAAAGTT+AGG - chr6_4:73804081-73804100 None:intergenic 25.0%
!!! TAACTTTTGAAAAATCACGA+TGG + chr6_4:73804080-73804099 Msa0996140:intron 25.0%
! TATCATCATCACTTTATGTT+TGG - chr6_4:73804138-73804157 None:intergenic 25.0%
!! AACATAAAGTGATGATGATA+TGG + chr6_4:73804138-73804157 Msa0996140:intron 25.0%
!! ACATAAAGTGATGATGATAT+GGG + chr6_4:73804139-73804158 Msa0996140:intron 25.0%
!! TAGTTAAGAGCAATCATTTT+GGG - chr6_4:73804243-73804262 None:intergenic 25.0%
! CAAAGATAAAGTCATTATTG+AGG - chr6_4:73804266-73804285 None:intergenic 25.0%
!!! TTAGGCTTTTGAAAACATTT+GGG - chr6_4:73804355-73804374 None:intergenic 25.0%
!! GTTGTGAGATTTTAGATAAA+AGG + chr6_4:73804414-73804433 Msa0996140:intron 25.0%
!! AGATTTTAGATAAAAGGTAG+AGG + chr6_4:73804420-73804439 Msa0996140:intron 25.0%
! TGTTTGAATATCTATCTCTT+AGG - chr6_4:73804488-73804507 None:intergenic 25.0%
! TAAAATGAAGCTTCAAATAG+TGG - chr6_4:73804568-73804587 None:intergenic 25.0%
! AAGATGATGCAAATTATAAG+GGG - chr6_4:73804692-73804711 None:intergenic 25.0%
! TGAAACAACATCATTACAAT+AGG - chr6_4:73804970-73804989 None:intergenic 25.0%
!!! AATTTTGGCAGATAATGATA+TGG + chr6_4:73805154-73805173 Msa0996140:intron 25.0%
!! AATTATTCAGATTTTTGCCT+AGG + chr6_4:73805265-73805284 Msa0996140:five_prime_UTR 25.0%
! TTATTCAGTGAATGAATGTT+AGG + chr6_4:73805565-73805584 Msa0996140:intron 25.0%
! AAAAAAGAGAAAGGGAATAA+AGG - chr6_4:73805616-73805635 None:intergenic 25.0%
!!! TTAATTGTGATTCTAAAGCT+AGG + chr6_4:73805708-73805727 Msa0996140:five_prime_UTR 25.0%
! ATAGTATGGAGAAATGATAA+GGG + chr6_4:73805746-73805765 Msa0996140:five_prime_UTR 25.0%
!! AATATGTGTATTCACTCTTT+TGG + chr6_4:73805864-73805883 Msa0996140:five_prime_UTR 25.0%
!! ATATGTGTATTCACTCTTTT+GGG + chr6_4:73805865-73805884 Msa0996140:five_prime_UTR 25.0%
! AGTATAGTGAACAAATATCA+TGG + chr6_4:73805985-73806004 Msa0996140:intron 25.0%
!!! GGCTATTAGCTTTTTTTTAT+AGG + chr6_4:73806012-73806031 Msa0996140:intron 25.0%
! TTAGGTCCAATGTAAAAAAA+AGG - chr6_4:73806218-73806237 None:intergenic 25.0%
! TAAGTTATCCTTTACAAAAC+CGG + chr6_4:73806235-73806254 Msa0996140:intron 25.0%
!!! ACCTTAATCTTTTTTCAATG+TGG + chr6_4:73806298-73806317 Msa0996140:intron 25.0%
! TCCACATTGAAAAAAGATTA+AGG - chr6_4:73806302-73806321 None:intergenic 25.0%
! ATGAAAGGAATTACTGTTAA+TGG - chr6_4:73806335-73806354 None:intergenic 25.0%
! GACAAAGTAAACAAAAATCA+CGG - chr6_4:73806498-73806517 None:intergenic 25.0%
! AACCTATATATATGTATTGG+TGG - chr6_4:73806546-73806565 None:intergenic 25.0%
! TTGTAAAAATAAGTGAGCTT+TGG - chr6_4:73806819-73806838 None:intergenic 25.0%
! TTTACAATTAACAAACATCG+CGG + chr6_4:73806832-73806851 Msa0996140:intron 25.0%
! ATTACCAAATAAGCACTTAA+AGG + chr6_4:73806956-73806975 Msa0996140:intron 25.0%
! AAATTCCAAGCTATTATTTG+TGG + chr6_4:73807059-73807078 Msa0996140:five_prime_UTR 25.0%
! AATTCCAAGCTATTATTTGT+GGG + chr6_4:73807060-73807079 Msa0996140:five_prime_UTR 25.0%
! TATGCATAATGTACAAATGA+TGG + chr6_4:73807499-73807518 Msa0996140:intron 25.0%
! AAAAAGTAGCAATAATCATC+TGG + chr6_4:73808184-73808203 Msa0996140:intron 25.0%
! AGAAACATGTTTCATCAATA+TGG + chr6_4:73808226-73808245 Msa0996140:intron 25.0%
! TAGTTAAACTTCAGTTAGTT+AGG + chr6_4:73808261-73808280 Msa0996140:intron 25.0%
!!! AGTTAGTTAGGATTTTAGTT+AGG + chr6_4:73808273-73808292 Msa0996140:intron 25.0%
!! TCTGTCTTATAATTTGGAAT+AGG + chr6_4:73808821-73808840 Msa0996140:intron 25.0%
! AATTTGTGTTTATAAGTGGT+GGG - chr6_4:73808885-73808904 None:intergenic 25.0%
! AAATTTGTGTTTATAAGTGG+TGG - chr6_4:73808886-73808905 None:intergenic 25.0%
! ATCTCATCTCTTATCTAAAT+AGG + chr6_4:73808909-73808928 Msa0996140:intron 25.0%
! ATCTCTTATCTAAATAGGAT+TGG + chr6_4:73808914-73808933 Msa0996140:intron 25.0%
! TCTTATATCATCTTAGAATC+TGG + chr6_4:73809024-73809043 Msa0996140:intron 25.0%
! AATGTATATATAAGTGGTAC+AGG - chr6_4:73809102-73809121 None:intergenic 25.0%
! TTTGGTTGTTGTGTTATATT+AGG + chr6_4:73809230-73809249 Msa0996140:intron 25.0%
!!! TGTTTGATAATCATTTTGTG+TGG - chr6_4:73809344-73809363 None:intergenic 25.0%
!! ATTTTATTGGAAATAACGCA+TGG - chr6_4:73809501-73809520 None:intergenic 25.0%
!! ATTGAAAGACAATTTTGCAA+GGG - chr6_4:73809570-73809589 None:intergenic 25.0%
! AATTCATTCACAAGTTATCT+AGG + chr6_4:73809650-73809669 Msa0996140:intron 25.0%
! GTAGATGAATAGAATAACTA+TGG - chr6_4:73809728-73809747 None:intergenic 25.0%
! TCATTTCTTCCATCATAATA+TGG + chr6_4:73809804-73809823 Msa0996140:intron 25.0%
!!! AAAAAAAAAAGCATCAATGG+CGG - chr6_4:73809887-73809906 None:intergenic 25.0%
! CACAATTTAAAGAAAGAAGA+AGG - chr6_4:73809995-73810014 None:intergenic 25.0%
!! CAGTTTTTACTCAATTTCAA+TGG + chr6_4:73810146-73810165 Msa0996140:intron 25.0%
!! CTTTTACCATGTTGAATTTT+CGG + chr6_4:73810205-73810224 Msa0996140:intron 25.0%
!! GAAAAATGACTTGTCAATAA+TGG - chr6_4:73810284-73810303 None:intergenic 25.0%
! TAATAGTTTCCTATAAGACA+TGG + chr6_4:73810338-73810357 Msa0996140:intron 25.0%
! TTTGTACGAAAAATGTTGTT+TGG + chr6_4:73810425-73810444 Msa0996140:intron 25.0%
!!! AGAATTTTTCAAGATACATG+TGG - chr6_4:73810720-73810739 None:intergenic 25.0%
! CGTTTAACAAAAACTAGAAT+TGG - chr6_4:73810774-73810793 None:intergenic 25.0%
! TCACAACGATTATTCATAAA+GGG + chr6_4:73811068-73811087 Msa0996140:exon 25.0%
! AATGTGTATATCTCAATGTA+TGG + chr6_4:73811276-73811295 Msa0996140:three_prime_UTR 25.0%
! ATTGGTGCAAAATAGCTTTT+AGG + chr6_4:73802368-73802387 Msa0996140:five_prime_UTR 30.0%
! TTGGTGCAAAATAGCTTTTA+GGG + chr6_4:73802369-73802388 Msa0996140:five_prime_UTR 30.0%
TTATTCTCTACTCTCTTTCT+TGG + chr6_4:73802423-73802442 Msa0996140:intron 30.0%
!!! TAGCAAACATTTTGAGATGA+TGG + chr6_4:73802512-73802531 Msa0996140:intron 30.0%
GACTAGGTTTAACTAAACTA+AGG - chr6_4:73802642-73802661 None:intergenic 30.0%
TAAAACAGTACATAACCAAG+TGG - chr6_4:73802684-73802703 None:intergenic 30.0%
TGAAGTCAATTTCCAAACAT+AGG - chr6_4:73803070-73803089 None:intergenic 30.0%
! ATGTTTGGAAATTGACTTCA+CGG + chr6_4:73803070-73803089 Msa0996140:intron 30.0%
TGGAATTTATGTGTTCCTAA+AGG + chr6_4:73803143-73803162 Msa0996140:intron 30.0%
! AAGTTTTCTTCCAAAACCTT+TGG - chr6_4:73803537-73803556 None:intergenic 30.0%
ATGTGTACAACTTTAGATTC+GGG - chr6_4:73803599-73803618 None:intergenic 30.0%
AATGGCAACAAAGCAAATTA+TGG - chr6_4:73803639-73803658 None:intergenic 30.0%
!! AATTTGCTTTGTTGCCATTT+TGG + chr6_4:73803640-73803659 Msa0996140:five_prime_UTR 30.0%
AAATAAGGGATCAACCAAAA+TGG - chr6_4:73803657-73803676 None:intergenic 30.0%
ATTCTCATTCTATGTGAACA+AGG + chr6_4:73803679-73803698 Msa0996140:five_prime_UTR 30.0%
! TTTTCTCATTCATTTTCTGC+AGG + chr6_4:73803787-73803806 Msa0996140:intron 30.0%
TCTTGTTACCAATTGGAAAA+CGG + chr6_4:73803820-73803839 Msa0996140:five_prime_UTR 30.0%
TAAGAATGTTCAAGAGATAC+AGG - chr6_4:73803883-73803902 None:intergenic 30.0%
GTGATTACTGAGAAATTACT+TGG - chr6_4:73803907-73803926 None:intergenic 30.0%
ACATATGCTACTAGAATAGA+TGG - chr6_4:73803955-73803974 None:intergenic 30.0%
AGCATATGTTTGTATCATAG+TGG + chr6_4:73803966-73803985 Msa0996140:intron 30.0%
TCAAAAGCTACATAGAATCA+CGG + chr6_4:73804023-73804042 Msa0996140:intron 30.0%
! GTAGTTAAGAGCAATCATTT+TGG - chr6_4:73804244-73804263 None:intergenic 30.0%
TAAAAATAACATGGAGCGAA+AGG - chr6_4:73804329-73804348 None:intergenic 30.0%
!! CTTAGGCTTTTGAAAACATT+TGG - chr6_4:73804356-73804375 None:intergenic 30.0%
TTGAATGTCAGTTTATCCTT+TGG - chr6_4:73804545-73804564 None:intergenic 30.0%
TCTTATAACTGATACCCAAA+GGG + chr6_4:73804802-73804821 Msa0996140:intron 30.0%
!!! TTTTTTTATGGGTACCCTTT+GGG - chr6_4:73804819-73804838 None:intergenic 30.0%
! AAGTATTGTTCCTACTATAG+TGG + chr6_4:73804890-73804909 Msa0996140:intron 30.0%
! AGATTTTTGCCTAGGATAAT+TGG + chr6_4:73805273-73805292 Msa0996140:five_prime_UTR 30.0%
TATCATCAGAGTCATGTTTA+AGG + chr6_4:73805316-73805335 Msa0996140:five_prime_UTR 30.0%
AATATATGTAGTACGGATAC+GGG - chr6_4:73805494-73805513 None:intergenic 30.0%
CAATATATGTAGTACGGATA+CGG - chr6_4:73805495-73805514 None:intergenic 30.0%
AATTGCGAATTATGTGACTA+TGG + chr6_4:73805520-73805539 Msa0996140:intron 30.0%
ATTATGTGACTATGGATGAA+AGG + chr6_4:73805528-73805547 Msa0996140:intron 30.0%
AGGGAATAAAGGAAAGAAAT+TGG - chr6_4:73805605-73805624 None:intergenic 30.0%
CTGCAAAGAAAAAAGAGAAA+GGG - chr6_4:73805624-73805643 None:intergenic 30.0%
TCTGCAAAGAAAAAAGAGAA+AGG - chr6_4:73805625-73805644 None:intergenic 30.0%
!!! TTTCTCTTTTTTCTTTGCAG+AGG + chr6_4:73805624-73805643 Msa0996140:intron 30.0%
!!! TTCTCTTTTTTCTTTGCAGA+GGG + chr6_4:73805625-73805644 Msa0996140:intron 30.0%
ATCCATGTAGATTAGAATGA+TGG - chr6_4:73805676-73805695 None:intergenic 30.0%
TGAATATATCAGCCATAGTA+TGG + chr6_4:73805732-73805751 Msa0996140:five_prime_UTR 30.0%
CTTATCATTTCTCCATACTA+TGG - chr6_4:73805747-73805766 None:intergenic 30.0%
CATAGTATGGAGAAATGATA+AGG + chr6_4:73805745-73805764 Msa0996140:five_prime_UTR 30.0%
TTTAGTAAGTGGTATAGCAT+TGG - chr6_4:73805825-73805844 None:intergenic 30.0%
TACCACTTACTAAAGAAACT+AGG + chr6_4:73805831-73805850 Msa0996140:five_prime_UTR 30.0%
! TATGTGTATTCACTCTTTTG+GGG + chr6_4:73805866-73805885 Msa0996140:five_prime_UTR 30.0%
TCTTTCTTCTGTTGTAATCA+AGG + chr6_4:73805919-73805938 Msa0996140:intron 30.0%
ACTGTTTATTACGGTCAAAA+CGG + chr6_4:73805951-73805970 Msa0996140:intron 30.0%
GTGAACAAATATCATGGAAA+CGG + chr6_4:73805991-73806010 Msa0996140:intron 30.0%
!! GGTTTTGTAAAGGATAACTT+AGG - chr6_4:73806236-73806255 None:intergenic 30.0%
CCATTAATAAATTCAAGTCG+CGG + chr6_4:73806394-73806413 Msa0996140:intron 30.0%
! ACCGTAACAAATTTTTGTCA+TGG + chr6_4:73806453-73806472 Msa0996140:intron 30.0%
!! GCCATGACAAAAATTTGTTA+CGG - chr6_4:73806457-73806476 None:intergenic 30.0%
CACCACCAATACATATATAT+AGG + chr6_4:73806541-73806560 Msa0996140:intron 30.0%
AAACAAAACCTAGATGGAAA+TGG - chr6_4:73806578-73806597 None:intergenic 30.0%
GAATGTAAACAAAACCTAGA+TGG - chr6_4:73806584-73806603 None:intergenic 30.0%
TACTCTAGTTACACTTGTAT+AGG - chr6_4:73806692-73806711 None:intergenic 30.0%
! ATGATTTTGCAATAGCTACA+AGG - chr6_4:73806904-73806923 None:intergenic 30.0%
TAGCTATTGCAAAATCATTG+TGG + chr6_4:73806906-73806925 Msa0996140:intron 30.0%
TGTTCCTTTAAGTGCTTATT+TGG - chr6_4:73806963-73806982 None:intergenic 30.0%
AAAGCTCACATAGGTATAAT+TGG - chr6_4:73807007-73807026 None:intergenic 30.0%
ATTACAGCAAATCATTACTC+TGG + chr6_4:73807027-73807046 Msa0996140:intron 30.0%
TTTCTGCACAAGTTAATTCT+CGG + chr6_4:73807189-73807208 Msa0996140:intron 30.0%
AAGTTAATTCTCGGTAACAA+TGG + chr6_4:73807198-73807217 Msa0996140:intron 30.0%
TCATGGTAGATACTAAATAG+AGG - chr6_4:73807290-73807309 None:intergenic 30.0%
AACCTCTATACATCATTTCT+AGG - chr6_4:73807357-73807376 None:intergenic 30.0%
GTAAAAACGACATACATTGA+AGG + chr6_4:73807968-73807987 Msa0996140:five_prime_UTR 30.0%
!!! TGATTATTGCTACTTTTTCG+AGG - chr6_4:73808182-73808201 None:intergenic 30.0%
!!! GCTTGAGAGCTTTTTTTTTT+TGG - chr6_4:73808423-73808442 None:intergenic 30.0%
TGCGTTAACCCTTATAAAAT+CGG + chr6_4:73809051-73809070 Msa0996140:intron 30.0%
GAGGACAATGTATATATAAG+TGG - chr6_4:73809108-73809127 None:intergenic 30.0%
TACATTGTCCTCAACTAATA+TGG + chr6_4:73809116-73809135 Msa0996140:intron 30.0%
TGTTAGTTCCATATTAGTTG+AGG - chr6_4:73809127-73809146 None:intergenic 30.0%
!! ACACACTTTAGGATTTGTAT+CGG - chr6_4:73809160-73809179 None:intergenic 30.0%
GAATGTAAACAACACACTTT+AGG - chr6_4:73809171-73809190 None:intergenic 30.0%
TTAGGTATGAATCACCTTAT+TGG + chr6_4:73809248-73809267 Msa0996140:intron 30.0%
AATGACAACAAAGAAATGGA+AGG - chr6_4:73809382-73809401 None:intergenic 30.0%
ACAGAATGACAACAAAGAAA+TGG - chr6_4:73809386-73809405 None:intergenic 30.0%
!! CTTGCTTTAAAATTTGGATC+AGG + chr6_4:73809534-73809553 Msa0996140:intron 30.0%
! CATTGAAAGACAATTTTGCA+AGG - chr6_4:73809571-73809590 None:intergenic 30.0%
CAAAATTGTCTTTCAATGCT+AGG + chr6_4:73809573-73809592 Msa0996140:intron 30.0%
! ATATGTTTATAAGTGATGGG+TGG - chr6_4:73809600-73809619 None:intergenic 30.0%
AAAGAAGAAGGAAAGAATCA+AGG - chr6_4:73809983-73810002 None:intergenic 30.0%
AGAAACTGCAAGAAAATGTA+GGG - chr6_4:73810064-73810083 None:intergenic 30.0%
AAGAAACTGCAAGAAAATGT+AGG - chr6_4:73810065-73810084 None:intergenic 30.0%
TAAAAGATGTCAGAATTGGA+AGG - chr6_4:73810191-73810210 None:intergenic 30.0%
ATGGTAAAAGATGTCAGAAT+TGG - chr6_4:73810195-73810214 None:intergenic 30.0%
! TCAATGATGGAACTTATCAT+TGG - chr6_4:73810365-73810384 None:intergenic 30.0%
AATTAGACATGAAAAGAGTG+GGG - chr6_4:73810502-73810521 None:intergenic 30.0%
CAATTAGACATGAAAAGAGT+GGG - chr6_4:73810503-73810522 None:intergenic 30.0%
TCAATTAGACATGAAAAGAG+TGG - chr6_4:73810504-73810523 None:intergenic 30.0%
!!! TTGTCCACTTCCTATTTTTA+AGG - chr6_4:73810674-73810693 None:intergenic 30.0%
GTGTTATGGAGAATGTTAAA+TGG - chr6_4:73810985-73811004 None:intergenic 30.0%
! AACAAAGAGCACAAATATAG+TGG - chr6_4:73811035-73811054 None:intergenic 30.0%
GTCACAACGATTATTCATAA+AGG + chr6_4:73811067-73811086 Msa0996140:CDS 30.0%
AACGATTATTCATAAAGGGA+GGG + chr6_4:73811072-73811091 Msa0996140:exon 30.0%
AAATGTGGTGATTGAAACAA+GGG - chr6_4:73811156-73811175 None:intergenic 30.0%
AAAATGTGGTGATTGAAACA+AGG - chr6_4:73811157-73811176 None:intergenic 30.0%
! CTTTGAGTTCCTCTTTAATC+AGG + chr6_4:73802398-73802417 Msa0996140:five_prime_UTR 35.0%
AAGATTGCAACTGGAAACAA+TGG - chr6_4:73802540-73802559 None:intergenic 35.0%
GAAAGAAAATGACTTCTTGG+TGG + chr6_4:73802608-73802627 Msa0996140:intron 35.0%
! CCTTTGGAAACTAGAATCAT+CGG - chr6_4:73802887-73802906 None:intergenic 35.0%
AGTGCATTCATCATAATGTG+TGG - chr6_4:73803439-73803458 None:intergenic 35.0%
CAGTTACGAAATTCTCTGTA+TGG + chr6_4:73803506-73803525 Msa0996140:intron 35.0%
TGTGTACAACTTTAGATTCG+GGG - chr6_4:73803598-73803617 None:intergenic 35.0%
AGTTGTACACATATGGAACA+AGG + chr6_4:73803607-73803626 Msa0996140:five_prime_UTR 35.0%
! ACACATATGGAACAAGGTTT+TGG + chr6_4:73803613-73803632 Msa0996140:five_prime_UTR 35.0%
!!! TGATATTGCCGTTTTCCAAT+TGG - chr6_4:73803831-73803850 None:intergenic 35.0%
GAGATACAGGACATCAATTA+GGG - chr6_4:73803870-73803889 None:intergenic 35.0%
AGAGATACAGGACATCAATT+AGG - chr6_4:73803871-73803890 None:intergenic 35.0%
!! TTGTATCATAGTGGATATGC+TGG + chr6_4:73803975-73803994 Msa0996140:intron 35.0%
!! TCACTTTATGTTTGGTGTCA+CGG - chr6_4:73804130-73804149 None:intergenic 35.0%
! TAAAGTGATGATGATATGGG+AGG + chr6_4:73804142-73804161 Msa0996140:intron 35.0%
GAAATATAAGCCTGTCATAG+TGG - chr6_4:73804177-73804196 None:intergenic 35.0%
TTATATTTCTCCTGGGTCTA+GGG + chr6_4:73804188-73804207 Msa0996140:five_prime_UTR 35.0%
!! TAAGAGCAATCATTTTGGGA+TGG - chr6_4:73804239-73804258 None:intergenic 35.0%
CTCTTATAACTGATACCCAA+AGG + chr6_4:73804801-73804820 Msa0996140:intron 35.0%
!!! GTTTTTTTATGGGTACCCTT+TGG - chr6_4:73804820-73804839 None:intergenic 35.0%
TACCCATAAAAAAACACCCA+CGG + chr6_4:73804825-73804844 Msa0996140:intron 35.0%
!!! TACCGTGGGTGTTTTTTTAT+GGG - chr6_4:73804830-73804849 None:intergenic 35.0%
! GTTTTTACCATATGTACCGT+GGG - chr6_4:73804844-73804863 None:intergenic 35.0%
! AGTTTTTACCATATGTACCG+TGG - chr6_4:73804845-73804864 None:intergenic 35.0%
AAAAACCCTCACAACAAGTA+TGG + chr6_4:73804865-73804884 Msa0996140:intron 35.0%
AAAACCCTCACAACAAGTAT+GGG + chr6_4:73804866-73804885 Msa0996140:intron 35.0%
TGACTCTGATGATACCATTT+GGG - chr6_4:73805310-73805329 None:intergenic 35.0%
ATGACTCTGATGATACCATT+TGG - chr6_4:73805311-73805330 None:intergenic 35.0%
ATGTTCTTTAGCCATGTTGT+TGG + chr6_4:73805366-73805385 Msa0996140:five_prime_UTR 35.0%
ATGTAGATTAGAATGATGGC+AGG - chr6_4:73805672-73805691 None:intergenic 35.0%
TGCCATCATTCTAATCTACA+TGG + chr6_4:73805671-73805690 Msa0996140:five_prime_UTR 35.0%
TTCTAATCTACATGGATGCA+TGG + chr6_4:73805679-73805698 Msa0996140:five_prime_UTR 35.0%
!! ATAAGAAAAAGCACCAGATG+TGG - chr6_4:73805792-73805811 None:intergenic 35.0%
!!! ACATCTGGTGCTTTTTCTTA+TGG + chr6_4:73805791-73805810 Msa0996140:five_prime_UTR 35.0%
CACCTAGTTTCTTTAGTAAG+TGG - chr6_4:73805836-73805855 None:intergenic 35.0%
ACATGAACAAAATGCATACC+TGG - chr6_4:73805895-73805914 None:intergenic 35.0%
TTATGCTAACCAGTGTCTTA+AGG + chr6_4:73806036-73806055 Msa0996140:intron 35.0%
TGTCTTAAGGACACTTGATA+AGG + chr6_4:73806049-73806068 Msa0996140:intron 35.0%
GAAATGCAGTATGTTTGCAT+TGG + chr6_4:73806076-73806095 Msa0996140:intron 35.0%
!! AATGCTAAAGAGTGCTCTTA+GGG - chr6_4:73806193-73806212 None:intergenic 35.0%
!! AAATGCTAAAGAGTGCTCTT+AGG - chr6_4:73806194-73806213 None:intergenic 35.0%
!! CATATAAGCCGGTTTTGTAA+AGG - chr6_4:73806246-73806265 None:intergenic 35.0%
! CTTTACAAAACCGGCTTATA+TGG + chr6_4:73806244-73806263 Msa0996140:intron 35.0%
AAAGATTAAGGTGTGACTAG+AGG - chr6_4:73806290-73806309 None:intergenic 35.0%
CCGCGACTTGAATTTATTAA+TGG - chr6_4:73806397-73806416 None:intergenic 35.0%
!! AATTTGTTACGGTCGAAACA+TGG - chr6_4:73806446-73806465 None:intergenic 35.0%
TCTCACTCGTAAAACTAGAT+TGG - chr6_4:73806608-73806627 None:intergenic 35.0%
!!! TCTAGTTTTACGAGTGAGAT+AGG + chr6_4:73806609-73806628 Msa0996140:intron 35.0%
! GTGCTTATTTGGTAATACAG+TGG - chr6_4:73806952-73806971 None:intergenic 35.0%
AGCACTTAAAGGAACATGAA+TGG + chr6_4:73806967-73806986 Msa0996140:intron 35.0%
TGCTGTAATAAAGCTCACAT+AGG - chr6_4:73807016-73807035 None:intergenic 35.0%
ACTTCCCACAAATAATAGCT+TGG - chr6_4:73807067-73807086 None:intergenic 35.0%
AGCCTAGAAATGATGTATAG+AGG + chr6_4:73807352-73807371 Msa0996140:five_prime_UTR 35.0%
!! TCATACATTCTGAGATCTTC+TGG - chr6_4:73807415-73807434 None:intergenic 35.0%
!! TGCATTTTGACAATGTCGAA+AGG - chr6_4:73807462-73807481 None:intergenic 35.0%
! ATGTCTATCTGGAGATTTTC+TGG - chr6_4:73807615-73807634 None:intergenic 35.0%
TATAACGTCGTATGTCTATC+TGG - chr6_4:73807626-73807645 None:intergenic 35.0%
GAGTTACATGTAAACGCATA+GGG - chr6_4:73807739-73807758 None:intergenic 35.0%
TGAGTTACATGTAAACGCAT+AGG - chr6_4:73807740-73807759 None:intergenic 35.0%
!! TCATTGTTACAGAGAGCATT+TGG - chr6_4:73807868-73807887 None:intergenic 35.0%
!!! GATTCGAATTTTTTCCTTGC+TGG + chr6_4:73807904-73807923 Msa0996140:intron 35.0%
!!! AATTTTTTCCTTGCTGGATG+AGG + chr6_4:73807910-73807929 Msa0996140:five_prime_UTR 35.0%
!! AGGAAGTAGAATTTTGAGTC+AGG + chr6_4:73807988-73808007 Msa0996140:five_prime_UTR 35.0%
!! GGAAGTAGAATTTTGAGTCA+GGG + chr6_4:73807989-73808008 Msa0996140:five_prime_UTR 35.0%
!! GAAGTAGAATTTTGAGTCAG+GGG + chr6_4:73807990-73808009 Msa0996140:five_prime_UTR 35.0%
!! AAGTAGAATTTTGAGTCAGG+GGG + chr6_4:73807991-73808010 Msa0996140:five_prime_UTR 35.0%
!!! AAGATGGGTTTTATTGTTCG+TGG + chr6_4:73808024-73808043 Msa0996140:exon 35.0%
TTGGTGAAGAGCTTCTAATA+TGG + chr6_4:73808106-73808125 Msa0996140:CDS 35.0%
TTGCTCTTTCTATAGAGCTT+AGG - chr6_4:73808312-73808331 None:intergenic 35.0%
ATATATGCTTGAGAGCTTGA+TGG - chr6_4:73808397-73808416 None:intergenic 35.0%
! TCATCCTGTGATTTGTAACT+CGG + chr6_4:73808472-73808491 Msa0996140:intron 35.0%
! AACTCGGTTTCTTTTGTAGA+AGG + chr6_4:73808488-73808507 Msa0996140:intron 35.0%
GGTAAAGAAGCAAAGATTCA+AGG + chr6_4:73808509-73808528 Msa0996140:CDS 35.0%
AGTAAAATGCTTAACCGATG+TGG + chr6_4:73808556-73808575 Msa0996140:CDS 35.0%
! AAACACAACAAGGTAATGGT+AGG - chr6_4:73808683-73808702 None:intergenic 35.0%
ACAGAAACACAACAAGGTAA+TGG - chr6_4:73808687-73808706 None:intergenic 35.0%
AGACAGATAACTATGAAGCA+TGG - chr6_4:73808808-73808827 None:intergenic 35.0%
!!! CTAACCAACGAGTTTTGAAA+GGG - chr6_4:73808857-73808876 None:intergenic 35.0%
ATATAAGAGCCTACTGATCT+AGG - chr6_4:73809012-73809031 None:intergenic 35.0%
GCGTTAACCCTTATAAAATC+GGG + chr6_4:73809052-73809071 Msa0996140:intron 35.0%
! CTCTCAACCCGATTTTATAA+GGG - chr6_4:73809062-73809081 None:intergenic 35.0%
AAATCATGATGACAGAGACA+TGG - chr6_4:73809213-73809232 None:intergenic 35.0%
ATGTCTCTGTCATCATGATT+TGG + chr6_4:73809212-73809231 Msa0996140:intron 35.0%
CAAAGATAATTCAGGATGCA+TGG + chr6_4:73809284-73809303 Msa0996140:CDS 35.0%
CTACGGATACCATATTATGA+TGG - chr6_4:73809816-73809835 None:intergenic 35.0%
AGGAAAGAATCAAGGAAACA+GGG - chr6_4:73809975-73809994 None:intergenic 35.0%
AAGGAAAGAATCAAGGAAAC+AGG - chr6_4:73809976-73809995 None:intergenic 35.0%
! ATAGCACCGAAAATTCAACA+TGG - chr6_4:73810214-73810233 None:intergenic 35.0%
CAAATCTTTGTCCAAGTTTG+GGG - chr6_4:73810315-73810334 None:intergenic 35.0%
CCAAATCTTTGTCCAAGTTT+GGG - chr6_4:73810316-73810335 None:intergenic 35.0%
CCAAACTTGGACAAAGATTT+GGG + chr6_4:73810314-73810333 Msa0996140:intron 35.0%
CAAACTTGGACAAAGATTTG+GGG + chr6_4:73810315-73810334 Msa0996140:intron 35.0%
ATCATTGGTCCATGTCTTAT+AGG - chr6_4:73810350-73810369 None:intergenic 35.0%
TGTGCCTTAAAAATAGGAAG+TGG + chr6_4:73810667-73810686 Msa0996140:intron 35.0%
!! GATTTACGTTGTTGGTGTTA+TGG - chr6_4:73810999-73811018 None:intergenic 35.0%
CAACGATTATTCATAAAGGG+AGG + chr6_4:73811071-73811090 Msa0996140:exon 35.0%
TGTTTGTCTGGTACATTCAA+GGG - chr6_4:73811107-73811126 None:intergenic 35.0%
ATGTTTGTCTGGTACATTCA+AGG - chr6_4:73811108-73811127 None:intergenic 35.0%
CTTGTATGCAGAGAAAAATG+TGG - chr6_4:73811171-73811190 None:intergenic 35.0%
ACAGTACATAACCAAGTGGT+CGG - chr6_4:73802680-73802699 None:intergenic 40.0%
! GGATGTGTTTCTGACAGAAT+CGG - chr6_4:73802856-73802875 None:intergenic 40.0%
!! CCGATGATTCTAGTTTCCAA+AGG + chr6_4:73802884-73802903 Msa0996140:five_prime_UTR 40.0%
CTGTGTCTCATATGGATCAA+GGG - chr6_4:73802956-73802975 None:intergenic 40.0%
ACTGTGTCTCATATGGATCA+AGG - chr6_4:73802957-73802976 None:intergenic 40.0%
TAAGAAGAAAGTGAGCACCT+TGG - chr6_4:73803037-73803056 None:intergenic 40.0%
TTCAGGAATACATGAAGAGC+AGG - chr6_4:73803567-73803586 None:intergenic 40.0%
! TAGTGGATATGCTGGAACTA+CGG + chr6_4:73803983-73804002 Msa0996140:intron 40.0%
!! GTGTAGCTTTTAGAAAGCCA+CGG - chr6_4:73804056-73804075 None:intergenic 40.0%
GTTGACATATCCACTATGAC+AGG + chr6_4:73804164-73804183 Msa0996140:intron 40.0%
TGACAGGCTTATATTTCTCC+TGG + chr6_4:73804180-73804199 Msa0996140:five_prime_UTR 40.0%
GACAGGCTTATATTTCTCCT+GGG + chr6_4:73804181-73804200 Msa0996140:five_prime_UTR 40.0%
CTTATATTTCTCCTGGGTCT+AGG + chr6_4:73804187-73804206 Msa0996140:five_prime_UTR 40.0%
TATATTTCTCCTGGGTCTAG+GGG + chr6_4:73804189-73804208 Msa0996140:five_prime_UTR 40.0%
TATTGCATTACCTCTTCCTC+AGG + chr6_4:73804293-73804312 Msa0996140:five_prime_UTR 40.0%
AAGAAATGTACCTGAGGAAG+AGG - chr6_4:73804306-73804325 None:intergenic 40.0%
GAAAGGAAGAAATGTACCTG+AGG - chr6_4:73804312-73804331 None:intergenic 40.0%
!!! GTACCGTGGGTGTTTTTTTA+TGG - chr6_4:73804831-73804850 None:intergenic 40.0%
AAAAACACCCACGGTACATA+TGG + chr6_4:73804834-73804853 Msa0996140:intron 40.0%
TGGAACAACACCACTATAGT+AGG - chr6_4:73804903-73804922 None:intergenic 40.0%
TCTGATGATACCATTTGGGT+TGG - chr6_4:73805306-73805325 None:intergenic 40.0%
!! TTTAGCCATGTTGTTGGTTC+AGG + chr6_4:73805372-73805391 Msa0996140:five_prime_UTR 40.0%
ATGGTATCTCTTTGCTCTAC+AGG + chr6_4:73805395-73805414 Msa0996140:five_prime_UTR 40.0%
TGCGGATAATTCAGTACCTA+GGG - chr6_4:73805455-73805474 None:intergenic 40.0%
ATGCGGATAATTCAGTACCT+AGG - chr6_4:73805456-73805475 None:intergenic 40.0%
ACTTGTTTGAATGCCACATC+TGG + chr6_4:73805776-73805795 Msa0996140:five_prime_UTR 40.0%
ATCAAGTGTCCTTAAGACAC+TGG - chr6_4:73806048-73806067 None:intergenic 40.0%
!! TCTTAGGGCATTGGTTAAGA+GGG - chr6_4:73806178-73806197 None:intergenic 40.0%
! AAAACCGGCTTATATGGTGA+GGG + chr6_4:73806250-73806269 Msa0996140:intron 40.0%
! CGGTAAGTTGACAGAAATCA+TGG + chr6_4:73806852-73806871 Msa0996140:intron 40.0%
TTTGCAATAGCTACAAGGTG+TGG - chr6_4:73806899-73806918 None:intergenic 40.0%
!! CCATGATGGACATTGTAAAG+AGG - chr6_4:73807090-73807109 None:intergenic 40.0%
CCTCTTTACAATGTCCATCA+TGG + chr6_4:73807087-73807106 Msa0996140:five_prime_UTR 40.0%
TACAATGTCCATCATGGCAT+TGG + chr6_4:73807093-73807112 Msa0996140:five_prime_UTR 40.0%
ACAATGTCCATCATGGCATT+GGG + chr6_4:73807094-73807113 Msa0996140:five_prime_UTR 40.0%
TTCTTCGAACTCTTAGCAAG+AGG + chr6_4:73807149-73807168 Msa0996140:five_prime_UTR 40.0%
!! TCTCGTTTTTCATGTGCGTT+TGG + chr6_4:73807222-73807241 Msa0996140:intron 40.0%
!!! TTCATGTGCGTTTGGTTTTG+CGG + chr6_4:73807230-73807249 Msa0996140:intron 40.0%
TACGATCTTGTATGTCATGC+AGG + chr6_4:73807523-73807542 Msa0996140:intron 40.0%
GCATAATGCTCCTGAAAGAA+CGG + chr6_4:73807575-73807594 Msa0996140:five_prime_UTR 40.0%
! TTTTACTAGTCGCTCACGAA+TGG - chr6_4:73807954-73807973 None:intergenic 40.0%
! CGTGGAAAATTAGAGAGCAT+CGG + chr6_4:73808042-73808061 Msa0996140:CDS 40.0%
!! TTAGAGAGCATCGGAAAAGA+TGG + chr6_4:73808051-73808070 Msa0996140:CDS 40.0%
CATCGGAAAAGATGGAATTC+CGG + chr6_4:73808059-73808078 Msa0996140:CDS 40.0%
!!! ATTCCGGTTTTGTTATCCGA+AGG + chr6_4:73808075-73808094 Msa0996140:CDS 40.0%
!!! TTCCGGTTTTGTTATCCGAA+GGG + chr6_4:73808076-73808095 Msa0996140:CDS 40.0%
! GAAGAGTCTTCTGAAAGCAA+AGG + chr6_4:73808135-73808154 Msa0996140:CDS 40.0%
CATGTTTCTCAGTTTCTCTC+AGG - chr6_4:73808215-73808234 None:intergenic 40.0%
GAAACCGAGTTACAAATCAC+AGG - chr6_4:73808479-73808498 None:intergenic 40.0%
GAAGCAAAGATTCAAGGACA+TGG + chr6_4:73808515-73808534 Msa0996140:CDS 40.0%
AAAATGCTTAACCGATGTGG+AGG + chr6_4:73808559-73808578 Msa0996140:CDS 40.0%
AAGTGAAAATGCCTCCACAT+CGG - chr6_4:73808573-73808592 None:intergenic 40.0%
!! CTTATGACTTGTTGAACGTG+AGG - chr6_4:73808650-73808669 None:intergenic 40.0%
CTCACGTTCAACAAGTCATA+AGG + chr6_4:73808648-73808667 Msa0996140:CDS 40.0%
CTATCGACAGAAACACAACA+AGG - chr6_4:73808693-73808712 None:intergenic 40.0%
TCAACCCTTTCAAAACTCGT+TGG + chr6_4:73808850-73808869 Msa0996140:intron 40.0%
!!! CCTAACCAACGAGTTTTGAA+AGG - chr6_4:73808858-73808877 None:intergenic 40.0%
! CCTTTCAAAACTCGTTGGTT+AGG + chr6_4:73808855-73808874 Msa0996140:intron 40.0%
! TTGTGTTTATAAGTGGTGGG+TGG - chr6_4:73808882-73808901 None:intergenic 40.0%
! CCTCTCAACCCGATTTTATA+AGG - chr6_4:73809063-73809082 None:intergenic 40.0%
!! CCTTATAAAATCGGGTTGAG+AGG + chr6_4:73809060-73809079 Msa0996140:intron 40.0%
ACGTGCAGCAAAGATAATTC+AGG + chr6_4:73809276-73809295 Msa0996140:CDS 40.0%
CTCTCTCATAGAGAAAGCTA+CGG - chr6_4:73809833-73809852 None:intergenic 40.0%
ATCTTCAACGAGGAACAAGA+AGG - chr6_4:73809929-73809948 None:intergenic 40.0%
TGTTCCTCGTTGAAGATTCT+TGG + chr6_4:73809932-73809951 Msa0996140:intron 40.0%
AAGACCAAGAATCTTCAACG+AGG - chr6_4:73809939-73809958 None:intergenic 40.0%
AAGAATCAAGGAAACAGGGA+GGG - chr6_4:73809971-73809990 None:intergenic 40.0%
AAAGAATCAAGGAAACAGGG+AGG - chr6_4:73809972-73809991 None:intergenic 40.0%
TGGTAAAAGATAGCCTACCA+CGG - chr6_4:73810264-73810283 None:intergenic 40.0%
CCCAAACTTGGACAAAGATT+TGG + chr6_4:73810313-73810332 Msa0996140:intron 40.0%
CCCAAATCTTTGTCCAAGTT+TGG - chr6_4:73810317-73810336 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr6_4:73810633-73810652 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG + chr6_4:73810641-73810660 Msa0996140:intron 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr6_4:73810644-73810663 Msa0996140:intron 40.0%
! AGGAGGTGTGCCTTAAAAAT+AGG + chr6_4:73810661-73810680 Msa0996140:intron 40.0%
TGGATCTAAAGACACATGCA+TGG - chr6_4:73810965-73810984 None:intergenic 40.0%
ACAAATATAGTGGCAAGTGC+TGG - chr6_4:73811025-73811044 None:intergenic 40.0%
TTTGTGCTCTTTGTTCTTGC+AGG + chr6_4:73811040-73811059 Msa0996140:intron 40.0%
TCTGATGGAGTATGTTTGTC+TGG - chr6_4:73811119-73811138 None:intergenic 40.0%
CAGTACATAACCAAGTGGTC+GGG - chr6_4:73802679-73802698 None:intergenic 45.0%
CTAGAATCATCGGATCGTTG+TGG - chr6_4:73802877-73802896 None:intergenic 45.0%
GTTTCCAAAGGAACACATCG+AGG + chr6_4:73802896-73802915 Msa0996140:five_prime_UTR 45.0%
GGATTCGACTGTGTCTCATA+TGG - chr6_4:73802964-73802983 None:intergenic 45.0%
! TATGGAGACGCCAAAGGTTT+TGG + chr6_4:73803524-73803543 Msa0996140:five_prime_UTR 45.0%
GATTCGGGGTTCATAACTTC+AGG - chr6_4:73803584-73803603 None:intergenic 45.0%
!! TAGCTTTTAGAAAGCCACGG+TGG - chr6_4:73804053-73804072 None:intergenic 45.0%
!! CTTTATGTTTGGTGTCACGG+TGG - chr6_4:73804127-73804146 None:intergenic 45.0%
ATATTTCTCCTGGGTCTAGG+GGG + chr6_4:73804190-73804209 Msa0996140:five_prime_UTR 45.0%
GGTCATACATCTAGCAGCTT+AGG - chr6_4:73804373-73804392 None:intergenic 45.0%
!! CTTGCCCATACTTGTTGTGA+GGG - chr6_4:73804873-73804892 None:intergenic 45.0%
!! ACTTGCCCATACTTGTTGTG+AGG - chr6_4:73804874-73804893 None:intergenic 45.0%
CCTGAAGATGCTGAGGAATT+TGG - chr6_4:73805189-73805208 None:intergenic 45.0%
CCAAATTCCTCAGCATCTTC+AGG + chr6_4:73805186-73805205 Msa0996140:five_prime_UTR 45.0%
ATATGCTCCTGAAGATGCTG+AGG - chr6_4:73805196-73805215 None:intergenic 45.0%
!! ATACCATTTGGGTTGGAGAC+TGG - chr6_4:73805299-73805318 None:intergenic 45.0%
ACCATCCTGAACCAACAACA+TGG - chr6_4:73805380-73805399 None:intergenic 45.0%
! TACGAGCTTTATGATCCCCT+AGG + chr6_4:73805436-73805455 Msa0996140:intron 45.0%
GCGGATAATTCAGTACCTAG+GGG - chr6_4:73805454-73805473 None:intergenic 45.0%
!! TTCACTCTTTTGGGGATTCC+AGG + chr6_4:73805874-73805893 Msa0996140:five_prime_UTR 45.0%
!! CTCTTAGGGCATTGGTTAAG+AGG - chr6_4:73806179-73806198 None:intergenic 45.0%
!! AAAGAGTGCTCTTAGGGCAT+TGG - chr6_4:73806187-73806206 None:intergenic 45.0%
! CAAAACCGGCTTATATGGTG+AGG + chr6_4:73806249-73806268 Msa0996140:intron 45.0%
AGAACCCTCACCATATAAGC+CGG - chr6_4:73806257-73806276 None:intergenic 45.0%
CAGCAAATCATTACTCTGGC+TGG + chr6_4:73807031-73807050 Msa0996140:intron 45.0%
TTGGGACTCTTGCTTCTCAT+CGG + chr6_4:73807112-73807131 Msa0996140:five_prime_UTR 45.0%
ACATGTTCCATCCTGCTTAC+AGG + chr6_4:73807329-73807348 Msa0996140:intron 45.0%
! ATTTCTAGGCTCCTGTAAGC+AGG - chr6_4:73807343-73807362 None:intergenic 45.0%
GAGGTTGTGATGTTGAGCAA+TGG + chr6_4:73807371-73807390 Msa0996140:five_prime_UTR 45.0%
GATCTTCTGGTAAGCGATGA+TGG - chr6_4:73807402-73807421 None:intergenic 45.0%
!! TGTCATGCAGGAGAGTACTA+CGG + chr6_4:73807535-73807554 Msa0996140:intron 45.0%
! TACGGGCTGAATGGAATAGT+CGG + chr6_4:73807553-73807572 Msa0996140:five_prime_UTR 45.0%
TTCTCGAGAACCGTTCTTTC+AGG - chr6_4:73807588-73807607 None:intergenic 45.0%
! TCACGAATGGCATCTAAGAC+AGG - chr6_4:73807941-73807960 None:intergenic 45.0%
AGGGGGTCTCGTAAAAAAGA+TGG + chr6_4:73808008-73808027 Msa0996140:exon 45.0%
GGGGGTCTCGTAAAAAAGAT+GGG + chr6_4:73808009-73808028 Msa0996140:exon 45.0%
!!! TCCGGTTTTGTTATCCGAAG+GGG + chr6_4:73808077-73808096 Msa0996140:CDS 45.0%
TCCCCTTCGGATAACAAAAC+CGG - chr6_4:73808081-73808100 None:intergenic 45.0%
! TTATCCGAAGGGGATGCTTT+TGG + chr6_4:73808087-73808106 Msa0996140:CDS 45.0%
!! TTCACCAAAAGCATCCCCTT+CGG - chr6_4:73808094-73808113 None:intergenic 45.0%
! CACATAAGTGAGGGGCATAT+TGG - chr6_4:73808960-73808979 None:intergenic 45.0%
ATGCCCCTCACTTATGTGTT+TGG + chr6_4:73808962-73808981 Msa0996140:intron 45.0%
GCACCAAACACATAAGTGAG+GGG - chr6_4:73808968-73808987 None:intergenic 45.0%
CGCACCAAACACATAAGTGA+GGG - chr6_4:73808969-73808988 None:intergenic 45.0%
ACGCACCAAACACATAAGTG+AGG - chr6_4:73808970-73808989 None:intergenic 45.0%
GGTGCGTGAAGATAAATGAC+AGG + chr6_4:73808983-73809002 Msa0996140:intron 45.0%
GGTAGAAGCTTGGTTCAACT+TGG - chr6_4:73810243-73810262 None:intergenic 45.0%
GCTGGCAAGATTTACGTTGT+TGG - chr6_4:73811007-73811026 None:intergenic 45.0%
TTCATAAAGGGAGGGATGCA+TGG + chr6_4:73811080-73811099 Msa0996140:exon 45.0%
!!! GCTTCTGAGGTTTTGTCTGA+TGG - chr6_4:73811134-73811153 None:intergenic 45.0%
GATTGAAACAAGGGCTTCTG+AGG - chr6_4:73811147-73811166 None:intergenic 45.0%
!!! ATAATTTATTTTACTTTTTT+TGG + chr6_4:73803748-73803767 Msa0996140:intron 5.0%
!! ATTTAAATAATAAAGTAAAA+AGG + chr6_4:73805018-73805037 Msa0996140:intron 5.0%
GGCTCAAGTGTAGCTAGACT+AGG - chr6_4:73802658-73802677 None:intergenic 50.0%
GTGTCCTCGATGTGTTCCTT+TGG - chr6_4:73802903-73802922 None:intergenic 50.0%
TCTCTGTATGGAGACGCCAA+AGG + chr6_4:73803518-73803537 Msa0996140:five_prime_UTR 50.0%
TATTTCTCCTGGGTCTAGGG+GGG + chr6_4:73804191-73804210 Msa0996140:five_prime_UTR 50.0%
! GGAGACTGGCCAATTATCCT+AGG - chr6_4:73805285-73805304 None:intergenic 50.0%
!! GCCATGTTGTTGGTTCAGGA+TGG + chr6_4:73805376-73805395 Msa0996140:five_prime_UTR 50.0%
GGTTCGTGGTACAACACATG+CGG - chr6_4:73805473-73805492 None:intergenic 50.0%
CATGGCATTTCATCGCAGTC+AGG + chr6_4:73806471-73806490 Msa0996140:intron 50.0%
TGTCGCAGCCATTTCCATCT+AGG + chr6_4:73806567-73806586 Msa0996140:intron 50.0%
CAAGAGTCCCAATGCCATGA+TGG - chr6_4:73807104-73807123 None:intergenic 50.0%
!! GTCATGCAGGAGAGTACTAC+GGG + chr6_4:73807536-73807555 Msa0996140:intron 50.0%
GACAGGTCACCTAGATCAGT+AGG + chr6_4:73809000-73809019 Msa0996140:intron 50.0%
GGGTTGAGAGGTAAAGAGTG+AGG + chr6_4:73809072-73809091 Msa0996140:intron 50.0%
GCTGCACGTGATCTCCAATA+AGG - chr6_4:73809265-73809284 None:intergenic 50.0%
GTTGAACCAAGCTTCTACCG+TGG + chr6_4:73810244-73810263 Msa0996140:intron 50.0%
AACCAAGCTTCTACCGTGGT+AGG + chr6_4:73810248-73810267 Msa0996140:intron 50.0%
AGGCACACCTCCTTGAATTG+TGG - chr6_4:73810654-73810673 None:intergenic 50.0%
TACACTTGAGCCCGACCACT+TGG + chr6_4:73802666-73802685 Msa0996140:intron 55.0%
AGAATCACGGCAATCCACCG+TGG + chr6_4:73804036-73804055 Msa0996140:intron 55.0%
TGGCCAGTCTCCAACCCAAA+TGG + chr6_4:73805293-73805312 Msa0996140:five_prime_UTR 55.0%
GTAGTACGGATACGGGTTCG+TGG - chr6_4:73805487-73805506 None:intergenic 55.0%
GGCAGGCATCTTGCAAACAG+TGG - chr6_4:73805655-73805674 None:intergenic 55.0%
CTAGGCTCCTGTAAGCAGGA+TGG - chr6_4:73807339-73807358 None:intergenic 55.0%
!! GGAGAGTACTACGGGCTGAA+TGG + chr6_4:73807544-73807563 Msa0996140:intron 55.0%
AGGCTCATCCTCATCCAGCA+AGG - chr6_4:73807921-73807940 None:intergenic 55.0%
GGAAGGAGATGTGCTTGACG+AGG - chr6_4:73810174-73810193 None:intergenic 55.0%
AGCCTACCACGGTAGAAGCT+TGG - chr6_4:73810253-73810272 None:intergenic 55.0%
TTCGGCTGTCACCCCAAACT+TGG + chr6_4:73810301-73810320 Msa0996140:intron 55.0%
TGTATGGCCACCGTCTGTTG+TGG + chr6_4:73811292-73811311 Msa0996140:three_prime_UTR 55.0%
GTATGGCCACCGTCTGTTGT+GGG + chr6_4:73811293-73811312 Msa0996140:three_prime_UTR 55.0%
TTCGGCGATCCCACAACAGA+CGG - chr6_4:73811305-73811324 None:intergenic 55.0%
TCTCCTGGGTCTAGGGGGGT+TGG + chr6_4:73804195-73804214 Msa0996140:five_prime_UTR 65.0%
GGCGATCCCACAACAGACGG+TGG - chr6_4:73811302-73811321 None:intergenic 65.0%
GCACCAACCCCCCTAGACCC+AGG - chr6_4:73804201-73804220 None:intergenic 70.0%
!! GGGTCTAGGGGGGTTGGTGC+TGG + chr6_4:73804201-73804220 Msa0996140:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 73802342 73811330 73802342 ID=Msa0996140;Name=Msa0996140
chr6_4 mRNA 73802342 73811330 73802342 ID=Msa0996140-mRNA-1;Parent=Msa0996140;Name=Msa0996140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=1696|1|1|1|0.76|0.64|14|244|144
chr6_4 exon 73802342 73802419 73802342 ID=Msa0996140-mRNA-1:exon:13757;Parent=Msa0996140-mRNA-1
chr6_4 exon 73802811 73803038 73802811 ID=Msa0996140-mRNA-1:exon:13758;Parent=Msa0996140-mRNA-1
chr6_4 exon 73803509 73803700 73803509 ID=Msa0996140-mRNA-1:exon:13759;Parent=Msa0996140-mRNA-1
chr6_4 exon 73803809 73803907 73803809 ID=Msa0996140-mRNA-1:exon:13760;Parent=Msa0996140-mRNA-1
chr6_4 exon 73804178 73804314 73804178 ID=Msa0996140-mRNA-1:exon:13761;Parent=Msa0996140-mRNA-1
chr6_4 exon 73805165 73805416 73805165 ID=Msa0996140-mRNA-1:exon:13762;Parent=Msa0996140-mRNA-1
chr6_4 exon 73805644 73805895 73805644 ID=Msa0996140-mRNA-1:exon:13763;Parent=Msa0996140-mRNA-1
chr6_4 exon 73807034 73807170 73807034 ID=Msa0996140-mRNA-1:exon:13764;Parent=Msa0996140-mRNA-1
chr6_4 exon 73807351 73807428 73807351 ID=Msa0996140-mRNA-1:exon:13765;Parent=Msa0996140-mRNA-1
chr6_4 exon 73807545 73807665 73807545 ID=Msa0996140-mRNA-1:exon:13766;Parent=Msa0996140-mRNA-1
chr6_4 exon 73807905 73808156 73807905 ID=Msa0996140-mRNA-1:exon:13767;Parent=Msa0996140-mRNA-1
chr6_4 exon 73808507 73808669 73808507 ID=Msa0996140-mRNA-1:exon:13768;Parent=Msa0996140-mRNA-1
chr6_4 exon 73809252 73809368 73809252 ID=Msa0996140-mRNA-1:exon:13769;Parent=Msa0996140-mRNA-1
chr6_4 exon 73811062 73811330 73811062 ID=Msa0996140-mRNA-1:exon:13770;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73802342 73802419 73802342 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73802811 73803038 73802811 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73803509 73803700 73803509 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73803809 73803907 73803809 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73804178 73804314 73804178 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73805165 73805416 73805165 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73805644 73805895 73805644 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73807034 73807170 73807034 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73807351 73807428 73807351 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73807545 73807665 73807545 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 five_prime_UTR 73807905 73808026 73807905 ID=Msa0996140-mRNA-1:five_prime_utr;Parent=Msa0996140-mRNA-1
chr6_4 CDS 73808027 73808156 73808027 ID=Msa0996140-mRNA-1:cds;Parent=Msa0996140-mRNA-1
chr6_4 CDS 73808507 73808669 73808507 ID=Msa0996140-mRNA-1:cds;Parent=Msa0996140-mRNA-1
chr6_4 CDS 73809252 73809368 73809252 ID=Msa0996140-mRNA-1:cds;Parent=Msa0996140-mRNA-1
chr6_4 CDS 73811062 73811086 73811062 ID=Msa0996140-mRNA-1:cds;Parent=Msa0996140-mRNA-1
chr6_4 three_prime_UTR 73811087 73811330 73811087 ID=Msa0996140-mRNA-1:three_prime_utr;Parent=Msa0996140-mRNA-1
Gene Sequence

>Msa0996140

ATGGGTTTTATTGTTCGTGGAAAATTAGAGAGCATCGGAAAAGATGGAATTCCGGTTTTGTTATCCGAAGGGGATGCTTTTGGTGAAGAGCTTCTAATATGGTATCTTGAAGAGTCTTCTGAAAGCAAAGAAGGTAAAGAAGCAAAGATTCAAGGACATGGCTTAACTAGTGACAGAACAGTAAAATGCTTAACCGATGTGGAGGCATTTTCACTTGATGCTAAAGCTATTGAAGAAGTCACAACTCATTTTGCAAGACTCTTGCGAAATCCTCACGTTCAACAAGTCATAAGGTATGAATCACCTTATTGGAGATCACGTGCAGCAAAGATAATTCAGGATGCATGGAGAAACATGAAGAAGTGTCTAATTCAAGCTAAATCCACACAAAATGATTATCAAACATTGAGGACTTGTCACAACGATTATTCATAA
Protein sequence

>Msa0996140

MGFIVRGKLESIGKDGIPVLLSEGDAFGEELLIWYLEESSESKEGKEAKIQGHGLTSDRTVKCLTDVEAFSLDAKAIEEVTTHFARLLRNPHVQQVIRYESPYWRSRAAKIIQDAWRNMKKCLIQAKSTQNDYQTLRTCHNDYS*