Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961630 | sp|Q9FX32|SUS6_ARATH | 67.151 | 895 | 269 | 2 | 1 | 872 | 1 | 893 | 0.0 | 1271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961630 | A0A396HIZ4 | 97.158 | 915 | 21 | 2 | 1 | 914 | 1 | 911 | 0.0 | 1852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0896440 | Msa0961630 | 0.855196 | 7.418181e-62 | -8.615850e-47 |
| Msa0922980 | Msa0961630 | 0.856288 | 3.559826e-62 | -8.615850e-47 |
| Msa0923030 | Msa0961630 | 0.820689 | 6.006837e-53 | -8.615850e-47 |
| Msa0961630 | Msa0996330 | 0.863997 | 1.668759e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961630 | MtrunA17_Chr6g0481131 | 97.158 | 915 | 21 | 2 | 1 | 914 | 1 | 911 | 0.0 | 1852 |
| Msa0961630 | MtrunA17_Chr6g0481171 | 96.807 | 783 | 24 | 1 | 133 | 914 | 5 | 787 | 0.0 | 1582 |
| Msa0961630 | MtrunA17_Chr5g0433761 | 71.531 | 836 | 235 | 2 | 1 | 836 | 1 | 833 | 0.0 | 1290 |
| Msa0961630 | MtrunA17_Chr3g0109841 | 70.767 | 821 | 236 | 2 | 5 | 822 | 3 | 822 | 0.0 | 1256 |
| Msa0961630 | MtrunA17_Chr7g0269581 | 56.305 | 801 | 346 | 2 | 11 | 811 | 9 | 805 | 0.0 | 946 |
| Msa0961630 | MtrunA17_Chr4g0070011 | 55.211 | 806 | 355 | 4 | 5 | 809 | 2 | 802 | 0.0 | 944 |
| Msa0961630 | MtrunA17_Chr2g0301621 | 54.478 | 804 | 360 | 4 | 7 | 809 | 2 | 800 | 0.0 | 942 |
| Msa0961630 | MtrunA17_Chr1g0195241 | 56.234 | 770 | 336 | 1 | 38 | 807 | 18 | 786 | 0.0 | 919 |
| Msa0961630 | MtrunA17_Chr6g0481241 | 81.301 | 246 | 19 | 3 | 638 | 883 | 1 | 219 | 8.14e-132 | 394 |
| Msa0961630 | MtrunA17_Chr6g0481261 | 96.117 | 103 | 4 | 0 | 638 | 740 | 1 | 103 | 1.68e-66 | 217 |
| Msa0961630 | MtrunA17_Chr6g0481271 | 73.154 | 149 | 30 | 3 | 770 | 914 | 1 | 143 | 4.95e-60 | 201 |
| Msa0961630 | MtrunA17_Chr6g0481211 | 92.708 | 96 | 7 | 0 | 819 | 914 | 1 | 96 | 2.35e-53 | 180 |
| Msa0961630 | MtrunA17_Chr6g0481151 | 93.151 | 73 | 5 | 0 | 568 | 640 | 24 | 96 | 5.04e-40 | 143 |
| Msa0961630 | MtrunA17_Chr5g0443091 | 26.195 | 523 | 321 | 19 | 285 | 757 | 171 | 678 | 3.70e-35 | 144 |
| Msa0961630 | MtrunA17_Chr3g0096241 | 25.430 | 523 | 322 | 16 | 285 | 757 | 167 | 671 | 5.06e-35 | 144 |
| Msa0961630 | MtrunA17_Chr4g0064501 | 25.087 | 578 | 344 | 21 | 265 | 779 | 125 | 676 | 1.27e-33 | 140 |
| Msa0961630 | MtrunA17_Chr6g0481161 | 90.909 | 44 | 4 | 0 | 690 | 733 | 1 | 44 | 6.33e-24 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961630 | AT1G73370.3 | 67.151 | 895 | 269 | 2 | 1 | 872 | 1 | 893 | 0.0 | 1271 |
| Msa0961630 | AT1G73370.1 | 67.151 | 895 | 269 | 2 | 1 | 872 | 1 | 893 | 0.0 | 1271 |
| Msa0961630 | AT1G73370.2 | 67.333 | 851 | 253 | 2 | 45 | 872 | 1 | 849 | 0.0 | 1206 |
| Msa0961630 | AT5G37180.1 | 68.546 | 798 | 248 | 1 | 12 | 809 | 5 | 799 | 0.0 | 1181 |
| Msa0961630 | AT5G37180.2 | 74.632 | 611 | 155 | 0 | 199 | 809 | 1 | 611 | 0.0 | 983 |
| Msa0961630 | AT4G02280.1 | 56.750 | 800 | 345 | 1 | 9 | 808 | 6 | 804 | 0.0 | 966 |
| Msa0961630 | AT5G49190.1 | 55.069 | 799 | 358 | 1 | 11 | 809 | 5 | 802 | 0.0 | 936 |
| Msa0961630 | AT5G49190.2 | 56.186 | 776 | 339 | 1 | 34 | 809 | 18 | 792 | 0.0 | 929 |
| Msa0961630 | AT5G20830.3 | 54.691 | 810 | 361 | 4 | 3 | 811 | 2 | 806 | 0.0 | 922 |
| Msa0961630 | AT5G20830.2 | 54.691 | 810 | 361 | 4 | 3 | 811 | 2 | 806 | 0.0 | 922 |
| Msa0961630 | AT5G20830.1 | 54.691 | 810 | 361 | 4 | 3 | 811 | 2 | 806 | 0.0 | 922 |
| Msa0961630 | AT3G43190.2 | 54.455 | 808 | 362 | 4 | 3 | 809 | 2 | 804 | 0.0 | 917 |
| Msa0961630 | AT3G43190.1 | 54.455 | 808 | 362 | 4 | 3 | 809 | 2 | 804 | 0.0 | 917 |
| Msa0961630 | AT5G49190.3 | 57.959 | 735 | 308 | 1 | 75 | 809 | 3 | 736 | 0.0 | 915 |
| Msa0961630 | AT5G37180.3 | 76.311 | 553 | 131 | 0 | 257 | 809 | 1 | 553 | 0.0 | 914 |
| Msa0961630 | AT4G10120.4 | 25.621 | 523 | 322 | 17 | 285 | 769 | 23 | 516 | 2.31e-35 | 145 |
| Msa0961630 | AT4G10120.2 | 25.568 | 528 | 316 | 19 | 285 | 769 | 197 | 690 | 4.32e-35 | 145 |
| Msa0961630 | AT4G10120.3 | 25.568 | 528 | 316 | 19 | 285 | 769 | 197 | 690 | 4.32e-35 | 145 |
| Msa0961630 | AT4G10120.1 | 25.568 | 528 | 316 | 19 | 285 | 769 | 197 | 690 | 4.32e-35 | 145 |
| Msa0961630 | AT1G04920.1 | 26.816 | 537 | 329 | 20 | 281 | 767 | 168 | 690 | 1.10e-34 | 144 |
| Msa0961630 | AT4G10120.5 | 25.100 | 502 | 311 | 15 | 304 | 769 | 17 | 489 | 5.94e-34 | 140 |
| Msa0961630 | AT5G11110.1 | 25.047 | 535 | 337 | 19 | 285 | 783 | 177 | 683 | 8.18e-33 | 137 |
| Msa0961630 | AT5G20280.1 | 25.599 | 543 | 327 | 20 | 281 | 778 | 166 | 676 | 2.32e-32 | 136 |
Find 179 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTATCTCTCAAAGTATT+TGG | 0.129152 | 6_3:+83793599 | Msa0961630:CDS |
| TTGAATATGGGATCAATTTA+TGG | 0.132045 | 6_3:+83792218 | Msa0961630:CDS |
| TTCTGTTTCTTCTCTATCTT+TGG | 0.134203 | 6_3:-83791572 | None:intergenic |
| CTTGCCATTGAGAAGATTAT+TGG | 0.177357 | 6_3:-83791436 | None:intergenic |
| CAAAGTGGTGATCTTTATTC+TGG | 0.182888 | 6_3:+83793534 | Msa0961630:CDS |
| TTAGGCCTAATCCTGGTTTC+TGG | 0.186079 | 6_3:+83786933 | Msa0961630:CDS |
| AAACTTGGTTTCATCCTTAA+TGG | 0.187010 | 6_3:+83789734 | Msa0961630:CDS |
| GACCTTGTAATTCAATCTTT+TGG | 0.194986 | 6_3:-83789111 | None:intergenic |
| TGGGATCAATTTATGGGTTT+TGG | 0.205721 | 6_3:+83792225 | Msa0961630:CDS |
| TGCAAACAAAGTGTTGAATA+TGG | 0.228861 | 6_3:+83792205 | Msa0961630:CDS |
| TACCAAGATTCTTGAACTTA+TGG | 0.238387 | 6_3:+83789671 | Msa0961630:CDS |
| TTACCTCTCCTTGATGATTA+AGG | 0.239757 | 6_3:-83787804 | None:intergenic |
| TTGACATTGGTTGAGGTTCT+TGG | 0.240050 | 6_3:-83792686 | None:intergenic |
| ACATTCTTAGAGTCCCTTTC+TGG | 0.252632 | 6_3:+83789457 | Msa0961630:CDS |
| ACCAAGTTTAGAAGCCATTA+AGG | 0.255408 | 6_3:-83789748 | None:intergenic |
| GGAAAACCTGACCTCATTAT+TGG | 0.261160 | 6_3:+83789696 | Msa0961630:CDS |
| TTTGGTCAAGCTGATGTTCT+AGG | 0.267299 | 6_3:+83788482 | Msa0961630:CDS |
| TCCTTGTTTCTAAGGTATAT+TGG | 0.268242 | 6_3:+83786013 | Msa0961630:five_prime_UTR |
| ATGGCACTTTCATCTTCTAT+TGG | 0.281086 | 6_3:+83787691 | Msa0961630:CDS |
| AGCTGGAGATCCAATTAAAA+TGG | 0.287185 | 6_3:+83788397 | Msa0961630:CDS |
| TGAGCAAATCTTTCTAAATA+AGG | 0.291781 | 6_3:-83789528 | None:intergenic |
| ATGAAGATTCAGATGCTAAA+TGG | 0.297761 | 6_3:+83790046 | Msa0961630:CDS |
| TGATGATAGGTTCAAGTTCT+TGG | 0.298390 | 6_3:-83789419 | None:intergenic |
| TAAAGTAGTTCTTCAATTGC+AGG | 0.301549 | 6_3:-83790463 | None:intergenic |
| CCAGCATTGTATGAAGCTTT+TGG | 0.302612 | 6_3:+83791733 | Msa0961630:CDS |
| TCAACCTTCCAGCAATTTCT+TGG | 0.309492 | 6_3:-83790161 | None:intergenic |
| GAGACTATGTTCCAATGTTC+AGG | 0.310006 | 6_3:-83791925 | None:intergenic |
| GGATTACGTTGGTTGCTTCC+AGG | 0.317665 | 6_3:+83793555 | Msa0961630:CDS |
| GTTGAAACTGTTTCCTCAAA+TGG | 0.324140 | 6_3:+83786039 | Msa0961630:exon |
| TCCTTAATGGCTTCTAAACT+TGG | 0.326870 | 6_3:+83789747 | Msa0961630:CDS |
| TTTCATATTGATCCTCATAA+TGG | 0.327462 | 6_3:+83791850 | Msa0961630:CDS |
| TTAGTAAATCTTGTAATTGT+TGG | 0.330790 | 6_3:+83791526 | Msa0961630:CDS |
| TGTTAGTTGAGATTCAATTT+TGG | 0.331623 | 6_3:-83792817 | None:intergenic |
| TTCAATGCTTTCTGAAGCTT+TGG | 0.336752 | 6_3:-83787983 | None:intergenic |
| TGAGGTTCTTGGGGTACCTT+AGG | 0.341726 | 6_3:-83792675 | None:intergenic |
| CGGCTTTGTTTCAAGGCATC+AGG | 0.345200 | 6_3:-83786115 | None:intergenic |
| TTCTCTATTCATGGATACTT+TGG | 0.345725 | 6_3:+83788464 | Msa0961630:CDS |
| TGGCAAAGCATTTCTTCATA+TGG | 0.350848 | 6_3:-83786141 | None:intergenic |
| TGAATATGGGATCAATTTAT+GGG | 0.351676 | 6_3:+83792219 | Msa0961630:CDS |
| ATCCATAAGTTCAAGAATCT+TGG | 0.355620 | 6_3:-83789673 | None:intergenic |
| TCATTTCAACAATGTACATT+TGG | 0.362766 | 6_3:+83793762 | Msa0961630:three_prime_UTR |
| TGACATTGGTTGAGGTTCTT+GGG | 0.367456 | 6_3:-83792685 | None:intergenic |
| ATAACAATGTTGAACATGTT+TGG | 0.375732 | 6_3:-83788440 | None:intergenic |
| CAGAGAATGGGGATTTGATA+AGG | 0.376461 | 6_3:+83788313 | Msa0961630:CDS |
| TAATCTTCAATTTAGGAACT+TGG | 0.378334 | 6_3:+83792304 | Msa0961630:CDS |
| GGCAACCATTGCTCATGCTT+TGG | 0.379572 | 6_3:+83790011 | Msa0961630:intron |
| TGAAACAGGTTGGTTGCAAA+TGG | 0.380181 | 6_3:+83786755 | Msa0961630:intron |
| ATGGAAACGGCTTTGTTTCA+AGG | 0.384267 | 6_3:-83786122 | None:intergenic |
| TGAAGAACTACTTTATAGTA+AGG | 0.384696 | 6_3:+83790471 | Msa0961630:CDS |
| TAGGCCTAATCCTGGTTTCT+GGG | 0.387526 | 6_3:+83786934 | Msa0961630:CDS |
| CTTTGCTTCTTCTCAGTGAA+AGG | 0.403582 | 6_3:-83790424 | None:intergenic |
| TGATTTCACCACACCTCATA+TGG | 0.403948 | 6_3:+83787672 | Msa0961630:CDS |
| TCTTGGGGTACCTTAGGAAT+TGG | 0.407309 | 6_3:-83792669 | None:intergenic |
| AAAACCTGGCCTCCAGTGTC+TGG | 0.410753 | 6_3:-83788509 | None:intergenic |
| ATTGATTCATCTCCATTATG+AGG | 0.417122 | 6_3:-83791862 | None:intergenic |
| AGATTAAATCAGCTGTGAAC+TGG | 0.418696 | 6_3:-83790101 | None:intergenic |
| CATTGCATTGCAGGCAAGAA+AGG | 0.421221 | 6_3:+83792644 | Msa0961630:intron |
| GTACATTTGGAATTAATTAG+TGG | 0.421448 | 6_3:+83793775 | Msa0961630:three_prime_UTR |
| CCTTGATTTGTTGCAAAAGT+TGG | 0.422131 | 6_3:-83791790 | None:intergenic |
| ATTATAGTTCATGATGTCTC+AGG | 0.423134 | 6_3:+83791826 | Msa0961630:CDS |
| CTTTCATCTTCTATTGGAAA+AGG | 0.424148 | 6_3:+83787697 | Msa0961630:CDS |
| GCAGATGATTTACAAGTAGA+TGG | 0.425661 | 6_3:+83786974 | Msa0961630:CDS |
| TGTGAGCAGGTTCAGAGAAT+GGG | 0.425686 | 6_3:+83788301 | Msa0961630:intron |
| TTGTGAGCAGGTTCAGAGAA+TGG | 0.430758 | 6_3:+83788300 | Msa0961630:intron |
| ACAATAAAGTTGAAATAAGA+AGG | 0.431928 | 6_3:-83793712 | None:intergenic |
| AAATTATACTGATGGAAACT+TGG | 0.433245 | 6_3:+83789719 | Msa0961630:CDS |
| ATGAACATAAAAGCAATTCC+TGG | 0.435819 | 6_3:-83793573 | None:intergenic |
| ATCGAATCGCGACACCCATT+GGG | 0.436391 | 6_3:-83789499 | None:intergenic |
| AGAGAATGGGGATTTGATAA+GGG | 0.436493 | 6_3:+83788314 | Msa0961630:CDS |
| CGTCTGATACCGAATGCAAA+AGG | 0.436501 | 6_3:+83789384 | Msa0961630:CDS |
| CGATGCATCGCGGATACAAA+AGG | 0.447960 | 6_3:+83791697 | Msa0961630:CDS |
| AATGGGGATTTGATAAGGGG+TGG | 0.454037 | 6_3:+83788318 | Msa0961630:CDS |
| ATACTTGAAATACAAGGAAA+TGG | 0.459100 | 6_3:+83787012 | Msa0961630:CDS |
| AGTACTTACCAAGAAATTGC+TGG | 0.461418 | 6_3:+83790153 | Msa0961630:CDS |
| ATTGCCAGACACTGGAGGCC+AGG | 0.463699 | 6_3:+83788505 | Msa0961630:CDS |
| GCAAACAAAGTGTTGAATAT+GGG | 0.464065 | 6_3:+83792206 | Msa0961630:CDS |
| TTTGCTGTTAGGCCTAATCC+TGG | 0.466122 | 6_3:+83786926 | Msa0961630:CDS |
| GGAGCAGCAATGTTGAACTT+TGG | 0.467131 | 6_3:-83790376 | None:intergenic |
| CAGCGGTGAATCTTCAAGTA+AGG | 0.467197 | 6_3:+83793497 | Msa0961630:intron |
| TATTCCCAGAAACCAGGATT+AGG | 0.467371 | 6_3:-83786938 | None:intergenic |
| TATCGAATCGCGACACCCAT+TGG | 0.467975 | 6_3:-83789500 | None:intergenic |
| TTATTTAGAAAGATTTGCTC+AGG | 0.470017 | 6_3:+83789530 | Msa0961630:CDS |
| GGACTTTGTCGCGTAGTCTC+AGG | 0.472253 | 6_3:+83790337 | Msa0961630:CDS |
| TAATTTCCAATAATGAGGTC+AGG | 0.474083 | 6_3:-83789702 | None:intergenic |
| GGTTGGTTGCAAATGGGAAA+AGG | 0.475033 | 6_3:+83786762 | Msa0961630:intron |
| CTTGAAGTAGAAGCCATTTG+AGG | 0.475472 | 6_3:-83786052 | None:intergenic |
| TGAAGTACCTCAAACCCATT+TGG | 0.478375 | 6_3:+83792782 | Msa0961630:CDS |
| GTAAATCTTGTAATTGTTGG+AGG | 0.478799 | 6_3:+83791529 | Msa0961630:CDS |
| AAGTTCAACATTGCTGCTCC+AGG | 0.484663 | 6_3:+83790379 | Msa0961630:CDS |
| AGCATTTCTTCATATGGAAA+CGG | 0.485069 | 6_3:-83786135 | None:intergenic |
| TGGGTGGTAATGCTGCCAAA+TGG | 0.491387 | 6_3:-83792797 | None:intergenic |
| GGGTGGTAATGCTGCCAAAT+GGG | 0.493185 | 6_3:-83792796 | None:intergenic |
| TTTGCTTCTTCTCAGTGAAA+GGG | 0.494336 | 6_3:-83790423 | None:intergenic |
| AACTGCAAGGTCAGTTCAGA+TGG | 0.495963 | 6_3:+83791632 | Msa0961630:CDS |
| CTGCCTCCTGTGTACAACTT+AGG | 0.496308 | 6_3:-83786880 | None:intergenic |
| AGTGAGACTAAATCACATAA+TGG | 0.498159 | 6_3:+83786787 | Msa0961630:CDS |
| TTCCCTTCTCTGTCCAGAAA+GGG | 0.498281 | 6_3:-83789470 | None:intergenic |
| GGAGTTGTTGACATTGGTTG+AGG | 0.498281 | 6_3:-83792693 | None:intergenic |
| AAGGGGTGGGGAAACACTGC+AGG | 0.501630 | 6_3:+83788332 | Msa0961630:CDS |
| CACACTGCATTTACCATGCC+GGG | 0.502984 | 6_3:+83790316 | Msa0961630:CDS |
| CTTTCTGAGGTACTAGAAGC+TGG | 0.503695 | 6_3:+83788380 | Msa0961630:CDS |
| ATTATTGGAAATTATACTGA+TGG | 0.504515 | 6_3:+83789711 | Msa0961630:CDS |
| ATATGAAGAAATGCTTTGCC+AGG | 0.509721 | 6_3:+83786143 | Msa0961630:CDS |
| GAAACCAATAATCTTCTCAA+TGG | 0.514548 | 6_3:+83791432 | Msa0961630:CDS |
| GAAACAGGTTGGTTGCAAAT+GGG | 0.514671 | 6_3:+83786756 | Msa0961630:intron |
| TTATTAAGCCTTAATCATCA+AGG | 0.516137 | 6_3:+83787796 | Msa0961630:CDS |
| TAGACAGATTGATCAGCTCC+TGG | 0.517673 | 6_3:-83790397 | None:intergenic |
| GTTGAACAAAGAACAAAAGT+TGG | 0.520029 | 6_3:+83792253 | Msa0961630:CDS |
| CTCCAAAAGATTGAATTACA+AGG | 0.520124 | 6_3:+83789109 | Msa0961630:CDS |
| ATTCCCTTCTCTGTCCAGAA+AGG | 0.522424 | 6_3:-83789471 | None:intergenic |
| AAGATTCTTGAACTTATGGA+TGG | 0.523540 | 6_3:+83789675 | Msa0961630:CDS |
| TTTGTATCATCAGCAAGGAT+AGG | 0.525118 | 6_3:+83790275 | Msa0961630:intron |
| TCATGAACTATAATTTCAGC+TGG | 0.525921 | 6_3:-83791817 | None:intergenic |
| GTGTGAGTTTCATATTGTCC+TGG | 0.526929 | 6_3:-83790298 | None:intergenic |
| GTGGGGAAACACTGCAGGAA+GGG | 0.527757 | 6_3:+83788337 | Msa0961630:CDS |
| TTCTAAACTTGGTGTAACTC+AGG | 0.528300 | 6_3:+83789758 | Msa0961630:CDS |
| CTTAATAAGTAATTAAGCAA+TGG | 0.529556 | 6_3:-83787781 | None:intergenic |
| TGGGGATTTGATAAGGGGTG+GGG | 0.530468 | 6_3:+83788320 | Msa0961630:CDS |
| TTGTGCTGCATCATGCCCCT+TGG | 0.530931 | 6_3:-83792751 | None:intergenic |
| TTCAATTGCAGGTTGGAAAG+TGG | 0.531055 | 6_3:-83790452 | None:intergenic |
| GTCTTCAAAGAATCAATGAA+TGG | 0.533715 | 6_3:+83791956 | Msa0961630:CDS |
| ATCTTTATTCTGGATTACGT+TGG | 0.533971 | 6_3:+83793544 | Msa0961630:CDS |
| TTGTATTTCAAGTATTCTGA+AGG | 0.535677 | 6_3:-83787004 | None:intergenic |
| ATGGGGATTTGATAAGGGGT+GGG | 0.535734 | 6_3:+83788319 | Msa0961630:CDS |
| GAAGATGAAAGTGCCATATG+AGG | 0.538755 | 6_3:-83787685 | None:intergenic |
| AAGGACTTGACTTTACTACT+AGG | 0.539536 | 6_3:+83787716 | Msa0961630:CDS |
| GTTCTAGGATTGCCAGACAC+TGG | 0.541620 | 6_3:+83788497 | Msa0961630:CDS |
| CCAAAAGCTTCATACAATGC+TGG | 0.542812 | 6_3:-83791733 | None:intergenic |
| GAAGGGAATTCTATCCCAAT+GGG | 0.543801 | 6_3:+83789485 | Msa0961630:CDS |
| TCTTCGCGAACCACTCGACT+AGG | 0.546019 | 6_3:-83791486 | None:intergenic |
| GTCCCTTTCTGGACAGAGAA+GGG | 0.546251 | 6_3:+83789468 | Msa0961630:CDS |
| GACATTGGTTGAGGTTCTTG+GGG | 0.549444 | 6_3:-83792684 | None:intergenic |
| AAATCACATAATGGAAGATG+TGG | 0.551952 | 6_3:+83786796 | Msa0961630:CDS |
| GCATGATGCAGCACAAGCAA+AGG | 0.553307 | 6_3:+83792758 | Msa0961630:CDS |
| AGTCCCTTTCTGGACAGAGA+AGG | 0.554342 | 6_3:+83789467 | Msa0961630:CDS |
| TCACACTGCATTTACCATGC+CGG | 0.555687 | 6_3:+83790315 | Msa0961630:CDS |
| TGATCAAGTAAGAGCACTAG+AGG | 0.555960 | 6_3:+83789078 | Msa0961630:CDS |
| AAAAGCAGAAGCTACTTCCA+AGG | 0.557438 | 6_3:+83792734 | Msa0961630:CDS |
| TTGGCAGGAGTTGTTGACAT+TGG | 0.562547 | 6_3:-83792699 | None:intergenic |
| GTCTGATACCGAATGCAAAA+GGG | 0.564856 | 6_3:+83789385 | Msa0961630:CDS |
| AAGAAAGGTACCAATTCCTA+AGG | 0.565800 | 6_3:+83792659 | Msa0961630:CDS |
| TGGAACATAGTCTCTAAAGC+TGG | 0.567192 | 6_3:+83791934 | Msa0961630:CDS |
| GTAGTTCTTCAATTGCAGGT+TGG | 0.571296 | 6_3:-83790459 | None:intergenic |
| AAAGCAGAAGCTACTTCCAA+GGG | 0.571521 | 6_3:+83792735 | Msa0961630:CDS |
| AAATGGTATTTGATGAGAAG+TGG | 0.572044 | 6_3:+83787029 | Msa0961630:CDS |
| CAATAATCTTCTCAATGGCA+AGG | 0.572371 | 6_3:+83791437 | Msa0961630:CDS |
| CAGTATAATTTCCAATAATG+AGG | 0.573217 | 6_3:-83789707 | None:intergenic |
| ATCATCAGCAAGGATAGGCC+AGG | 0.575526 | 6_3:+83790280 | Msa0961630:intron |
| GAGACTACGCGACAAAGTCC+CGG | 0.575633 | 6_3:-83790334 | None:intergenic |
| GCAAGACTAATCCTGAACAT+TGG | 0.578191 | 6_3:+83791914 | Msa0961630:CDS |
| AGAAGGGAATTCTATCCCAA+TGG | 0.579688 | 6_3:+83789484 | Msa0961630:CDS |
| GTGAGCAGGTTCAGAGAATG+GGG | 0.582707 | 6_3:+83788302 | Msa0961630:intron |
| TTAACATATTCCCAGAAACC+AGG | 0.584706 | 6_3:-83786944 | None:intergenic |
| GGTGGGGAAACACTGCAGGA+AGG | 0.587059 | 6_3:+83788336 | Msa0961630:CDS |
| CAAAGAACAAAAGTTGGCAA+AGG | 0.588238 | 6_3:+83792259 | Msa0961630:CDS |
| AATGCTGCCAAATGGGTTTG+AGG | 0.588473 | 6_3:-83792789 | None:intergenic |
| GAGAATGGGGATTTGATAAG+GGG | 0.604476 | 6_3:+83788315 | Msa0961630:CDS |
| TTCAGAATACTTGAAATACA+AGG | 0.609609 | 6_3:+83787006 | Msa0961630:CDS |
| TGTGAAGCCTCAGATTCTTG+TGG | 0.617074 | 6_3:+83789138 | Msa0961630:CDS |
| TTTCTCCAAAGCATGAGCAA+TGG | 0.620352 | 6_3:-83790016 | None:intergenic |
| ATGAAAGAGTACAAACTGCA+AGG | 0.621541 | 6_3:+83791619 | Msa0961630:CDS |
| TGAACTCTCACTCAATCTTG+AGG | 0.622142 | 6_3:-83787746 | None:intergenic |
| TAGCATACCACAAGAATCTG+AGG | 0.626563 | 6_3:-83789145 | None:intergenic |
| ACATTAGTGGCCTAGTCGAG+TGG | 0.646877 | 6_3:+83791476 | Msa0961630:CDS |
| ACCAATATACCTTAGAAACA+AGG | 0.648622 | 6_3:-83786014 | None:intergenic |
| CTTACCAAGAAATTGCTGGA+AGG | 0.648972 | 6_3:+83790157 | Msa0961630:CDS |
| GACAATGAGAATGCTTTCTG+AGG | 0.650408 | 6_3:+83788367 | Msa0961630:CDS |
| GAACTAGCTGCTAAACAAAG+TGG | 0.652790 | 6_3:+83793519 | Msa0961630:CDS |
| CATCCTAAGTTGTACACAGG+AGG | 0.653499 | 6_3:+83786877 | Msa0961630:CDS |
| AAGCCTTAATCATCAAGGAG+AGG | 0.663492 | 6_3:+83787801 | Msa0961630:CDS |
| CTAGGATTGCCAGACACTGG+AGG | 0.672637 | 6_3:+83788500 | Msa0961630:CDS |
| TGGAGATGAATCAATCAACA+AGG | 0.681896 | 6_3:+83791870 | Msa0961630:CDS |
| GTGATTGAGGCAATGAACTG+TGG | 0.684673 | 6_3:+83791763 | Msa0961630:CDS |
| ATACATCCTAAGTTGTACAC+AGG | 0.691450 | 6_3:+83786874 | Msa0961630:CDS |
| TTGAATCTCAACTAACACCA+AGG | 0.697304 | 6_3:+83792823 | Msa0961630:CDS |
| TGAAAGTGCCATATGAGGTG+TGG | 0.718654 | 6_3:-83787680 | None:intergenic |
| CAAACTGATAGATATCGCAA+CGG | 0.722489 | 6_3:+83791664 | Msa0961630:CDS |
| AAGCAGAAGCTACTTCCAAG+GGG | 0.733208 | 6_3:+83792736 | Msa0961630:CDS |
| AGAGCTTTACCGATGCATCG+CGG | 0.787941 | 6_3:+83791687 | Msa0961630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATATCATTATTATAGT+AGG | + | chr6_3:83786277-83786296 | Msa0961630:intron | 10.0% |
| !! | TTTATTATTTATTTACAGAT+TGG | - | chr6_3:83786400-83786419 | None:intergenic | 10.0% |
| !! | TAATGAAAAAAAAATAGTAA+GGG | - | chr6_3:83787578-83787597 | None:intergenic | 10.0% |
| !! | ATAATGAAAAAAAAATAGTA+AGG | - | chr6_3:83787579-83787598 | None:intergenic | 10.0% |
| !!! | TGAATAATATTTTCTTTATT+GGG | + | chr6_3:83789033-83789052 | Msa0961630:intron | 10.0% |
| !! | ATAATTTATAAGAAGAAAAA+AGG | - | chr6_3:83790187-83790206 | None:intergenic | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | + | chr6_3:83790757-83790776 | Msa0961630:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr6_3:83790805-83790824 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr6_3:83790806-83790825 | None:intergenic | 10.0% |
| !!! | TTTTTTTAATTGTAACAAAA+GGG | - | chr6_3:83792369-83792388 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAATTGTAACAAA+AGG | - | chr6_3:83792370-83792389 | None:intergenic | 10.0% |
| !! | ATTACACTTATTAATTATCA+AGG | + | chr6_3:83786230-83786249 | Msa0961630:intron | 15.0% |
| !! | TAACAAACAATATTATATGA+AGG | + | chr6_3:83786640-83786659 | Msa0961630:intron | 15.0% |
| !!! | ATAAAATTTTCAAAACTGTA+CGG | + | chr6_3:83787279-83787298 | Msa0961630:intron | 15.0% |
| !! | GATAAATTAATATGGTATTT+AGG | - | chr6_3:83788553-83788572 | None:intergenic | 15.0% |
| !! | AGTAGTTAGATAAATTAATA+TGG | - | chr6_3:83788561-83788580 | None:intergenic | 15.0% |
| !!! | CTGAATAATATTTTCTTTAT+TGG | + | chr6_3:83789032-83789051 | Msa0961630:intron | 15.0% |
| !! | AATTCTTATATACTATCTTA+TGG | + | chr6_3:83790212-83790231 | Msa0961630:intron | 15.0% |
| !! | TTAATGTAATATTATCATGA+TGG | + | chr6_3:83790235-83790254 | Msa0961630:intron | 15.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | + | chr6_3:83790653-83790672 | Msa0961630:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr6_3:83790691-83790710 | Msa0961630:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr6_3:83790729-83790748 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr6_3:83791088-83791107 | Msa0961630:intron | 15.0% |
| !!! | ACATATTTTAGTTTGAATAA+TGG | - | chr6_3:83791187-83791206 | None:intergenic | 15.0% |
| !! | TATTCAAACTAAAATATGTT+TGG | + | chr6_3:83791188-83791207 | Msa0961630:intron | 15.0% |
| !! | TTTGAAAATGACAAATAAAT+CGG | + | chr6_3:83792041-83792060 | Msa0961630:intron | 15.0% |
| !! | TAGTTTAACAAAAATTCATA+TGG | + | chr6_3:83792125-83792144 | Msa0961630:intron | 15.0% |
| !!! | TGTTTTATAATCTTCAATTT+AGG | + | chr6_3:83792297-83792316 | Msa0961630:CDS | 15.0% |
| !!! | AAAAACAACGATTTTTATTT+TGG | + | chr6_3:83792481-83792500 | Msa0961630:intron | 15.0% |
| !!! | TAATGTTTCAATAGTTATTT+TGG | - | chr6_3:83792613-83792632 | None:intergenic | 15.0% |
| !! | AAATAACTATTGAAACATTA+TGG | + | chr6_3:83792613-83792632 | Msa0961630:intron | 15.0% |
| !! | AACAAATAATATGAGACAAA+GGG | - | chr6_3:83786173-83786192 | None:intergenic | 20.0% |
| !!! | CTCATATTATTTGTTGTTTA+AGG | + | chr6_3:83786178-83786197 | Msa0961630:intron | 20.0% |
| !!! | ATTATTTGTTGTTTAAGGTT+AGG | + | chr6_3:83786183-83786202 | Msa0961630:intron | 20.0% |
| !! | TAAATGTATAGAATGAAAGT+TGG | + | chr6_3:83786442-83786461 | Msa0961630:intron | 20.0% |
| !!! | GTATTGATCACATTTTTAAT+AGG | - | chr6_3:83786568-83786587 | None:intergenic | 20.0% |
| !!! | GTTGTTTTTTGTGTTAATTT+TGG | + | chr6_3:83786691-83786710 | Msa0961630:intron | 20.0% |
| !!! | ATTAAGCATACAATTTTCTT+TGG | + | chr6_3:83787078-83787097 | Msa0961630:intron | 20.0% |
| !!! | AATTTGTTTTGTAAATCTGA+GGG | - | chr6_3:83787154-83787173 | None:intergenic | 20.0% |
| !!! | TAATTTGTTTTGTAAATCTG+AGG | - | chr6_3:83787155-83787174 | None:intergenic | 20.0% |
| !! | ATTTATTTGACTCTTTGATA+AGG | + | chr6_3:83787443-83787462 | Msa0961630:intron | 20.0% |
| !! | CTTAATAAGTAATTAAGCAA+TGG | - | chr6_3:83787784-83787803 | None:intergenic | 20.0% |
| !!! | AAAAGTGATTCCATTTTAAT+TGG | - | chr6_3:83788410-83788429 | None:intergenic | 20.0% |
| !!! | ATTGTTATTTTCTCTATTCA+TGG | + | chr6_3:83788455-83788474 | Msa0961630:CDS | 20.0% |
| !!! | AAATTTTAGTTGTATTGAAG+GGG | - | chr6_3:83788950-83788969 | None:intergenic | 20.0% |
| !!! | CAAATTTTAGTTGTATTGAA+GGG | - | chr6_3:83788951-83788970 | None:intergenic | 20.0% |
| !!! | TCAAATTTTAGTTGTATTGA+AGG | - | chr6_3:83788952-83788971 | None:intergenic | 20.0% |
| !! | ACTAAAATTTGACAAAACTA+TGG | + | chr6_3:83788960-83788979 | Msa0961630:intron | 20.0% |
| !! | AGGAAACAAAATAAAATTGA+AGG | - | chr6_3:83789274-83789293 | None:intergenic | 20.0% |
| !! | TACTAATGTATTTGTATGTT+CGG | + | chr6_3:83789322-83789341 | Msa0961630:intron | 20.0% |
| !! | AAAAATGCATAATTAGAAAG+AGG | - | chr6_3:83789632-83789651 | None:intergenic | 20.0% |
| !!! | TATGCATTTTTATCTTAAAC+AGG | + | chr6_3:83789641-83789660 | Msa0961630:intron | 20.0% |
| !! | ATTATTGGAAATTATACTGA+TGG | + | chr6_3:83789711-83789730 | Msa0961630:CDS | 20.0% |
| !!! | AAAAGTACTTATAGAGTAAT+TGG | - | chr6_3:83789961-83789980 | None:intergenic | 20.0% |
| !! | TATAAAATAGTTGAAGGATT+AGG | + | chr6_3:83790577-83790596 | Msa0961630:intron | 20.0% |
| !! | ATAAAATAGTTGAAGGATTA+GGG | + | chr6_3:83790578-83790597 | Msa0961630:intron | 20.0% |
| !! | CTGTATATTAACTGTTATAT+CGG | - | chr6_3:83790630-83790649 | None:intergenic | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr6_3:83791115-83791134 | None:intergenic | 20.0% |
| !! | TTTGGATGATAATCATATTA+TGG | + | chr6_3:83791206-83791225 | Msa0961630:intron | 20.0% |
| !! | TTAGTAAATCTTGTAATTGT+TGG | + | chr6_3:83791526-83791545 | Msa0961630:CDS | 20.0% |
| !! | TTTATGGTTACAGATATTAT+CGG | + | chr6_3:83791990-83792009 | Msa0961630:intron | 20.0% |
| !! | TTAACAAAAATTCATATGGT+TGG | + | chr6_3:83792129-83792148 | Msa0961630:intron | 20.0% |
| !!! | ATTCTTTAGTTTGACTAATA+AGG | - | chr6_3:83792874-83792893 | None:intergenic | 20.0% |
| !! | AGTTACACTAAATGAATATT+TGG | + | chr6_3:83792902-83792921 | Msa0961630:intron | 20.0% |
| !! | ATGCACAATCATAATATTTA+GGG | - | chr6_3:83792982-83793001 | None:intergenic | 20.0% |
| !! | AATGCACAATCATAATATTT+AGG | - | chr6_3:83792983-83793002 | None:intergenic | 20.0% |
| !!! | TTCTTCCATGTTAATTTTTT+TGG | - | chr6_3:83793378-83793397 | None:intergenic | 20.0% |
| !!! | TTTGCATTAATTTTTGTCTT+TGG | + | chr6_3:83793469-83793488 | Msa0961630:intron | 20.0% |
| !! | ACAATAAAGTTGAAATAAGA+AGG | - | chr6_3:83793715-83793734 | None:intergenic | 20.0% |
| !!! | CAATTTTTTCCTTGTTTCTA+AGG | + | chr6_3:83786005-83786024 | Msa0961630:five_prime_UTR | 25.0% |
| ! | CAACAAATAATATGAGACAA+AGG | - | chr6_3:83786174-83786193 | None:intergenic | 25.0% |
| ! | TCATTATTATAGTAGGAGTA+AGG | + | chr6_3:83786284-83786303 | Msa0961630:intron | 25.0% |
| ! | GAGTAAGGACTAATTATTAT+AGG | + | chr6_3:83786299-83786318 | Msa0961630:intron | 25.0% |
| !!! | ATTTTAGTTACATTGTAGTC+TGG | - | chr6_3:83786517-83786536 | None:intergenic | 25.0% |
| ! | TCATACCTTAATGTTAAAGA+AGG | - | chr6_3:83786729-83786748 | None:intergenic | 25.0% |
| ! | AGGTATGAAAAATATGAAAC+AGG | + | chr6_3:83786741-83786760 | Msa0961630:intron | 25.0% |
| ! | ATGAAAAATATGAAACAGGT+TGG | + | chr6_3:83786745-83786764 | Msa0961630:intron | 25.0% |
| !! | TTGTATTTCAAGTATTCTGA+AGG | - | chr6_3:83787007-83787026 | None:intergenic | 25.0% |
| ! | TTCAGAATACTTGAAATACA+AGG | + | chr6_3:83787006-83787025 | Msa0961630:CDS | 25.0% |
| ! | ATACTTGAAATACAAGGAAA+TGG | + | chr6_3:83787012-83787031 | Msa0961630:CDS | 25.0% |
| !!! | AGATATTTTGATATTGACGT+AGG | - | chr6_3:83787180-83787199 | None:intergenic | 25.0% |
| ! | ATTGATTGACGTTCAAATTA+AGG | + | chr6_3:83787324-83787343 | Msa0961630:intron | 25.0% |
| ! | TTGATTGACGTTCAAATTAA+GGG | + | chr6_3:83787325-83787344 | Msa0961630:intron | 25.0% |
| !! | TTTTAGTCCTTCAAATTACA+AGG | - | chr6_3:83787393-83787412 | None:intergenic | 25.0% |
| ! | TTATTAAGCCTTAATCATCA+AGG | + | chr6_3:83787796-83787815 | Msa0961630:CDS | 25.0% |
| !! | TATACCTGTTTTCAAAATTC+TGG | - | chr6_3:83788054-83788073 | None:intergenic | 25.0% |
| ! | TTAATAGTATATTGACGCTT+CGG | - | chr6_3:83788244-83788263 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTTTTGTGAGC+AGG | + | chr6_3:83788288-83788307 | Msa0961630:intron | 25.0% |
| ! | ATAACAATGTTGAACATGTT+TGG | - | chr6_3:83788443-83788462 | None:intergenic | 25.0% |
| ! | TGAGCAAATCTTTCTAAATA+AGG | - | chr6_3:83789531-83789550 | None:intergenic | 25.0% |
| !! | TTATTTAGAAAGATTTGCTC+AGG | + | chr6_3:83789530-83789549 | Msa0961630:CDS | 25.0% |
| ! | AATATCAAATATGGAAGAGA+GGG | - | chr6_3:83789584-83789603 | None:intergenic | 25.0% |
| ! | TAATATCAAATATGGAAGAG+AGG | - | chr6_3:83789585-83789604 | None:intergenic | 25.0% |
| !! | CTTGGTAGTAATATCAAATA+TGG | - | chr6_3:83789593-83789612 | None:intergenic | 25.0% |
| ! | CAGTATAATTTCCAATAATG+AGG | - | chr6_3:83789710-83789729 | None:intergenic | 25.0% |
| ! | AAATTATACTGATGGAAACT+TGG | + | chr6_3:83789719-83789738 | Msa0961630:CDS | 25.0% |
| ! | TGTTTAGATAAGCTTAATCA+AGG | - | chr6_3:83789802-83789821 | None:intergenic | 25.0% |
| ! | CTTGTATCAATTATGATTGA+AGG | + | chr6_3:83789990-83790009 | Msa0961630:intron | 25.0% |
| !! | TTATCATGATGGTAACATTT+TGG | + | chr6_3:83790246-83790265 | Msa0961630:intron | 25.0% |
| ! | TGAAGAACTACTTTATAGTA+AGG | + | chr6_3:83790471-83790490 | Msa0961630:CDS | 25.0% |
| ! | CTTGATAAGAAAGTAATAGA+AGG | - | chr6_3:83790524-83790543 | None:intergenic | 25.0% |
| !!! | GACTAATTTGCTTTTTTGTT+TGG | + | chr6_3:83790995-83791014 | Msa0961630:intron | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr6_3:83791110-83791129 | None:intergenic | 25.0% |
| ! | TTTCATATTGATCCTCATAA+TGG | + | chr6_3:83791850-83791869 | Msa0961630:CDS | 25.0% |
| ! | AATGGTACATTTCTGATTTA+TGG | + | chr6_3:83791974-83791993 | Msa0961630:intron | 25.0% |
| ! | TATGAAAGTGACAGTTAAAA+AGG | + | chr6_3:83792078-83792097 | Msa0961630:intron | 25.0% |
| ! | TTGAATATGGGATCAATTTA+TGG | + | chr6_3:83792218-83792237 | Msa0961630:CDS | 25.0% |
| ! | TGAATATGGGATCAATTTAT+GGG | + | chr6_3:83792219-83792238 | Msa0961630:CDS | 25.0% |
| ! | TAATCTTCAATTTAGGAACT+TGG | + | chr6_3:83792304-83792323 | Msa0961630:CDS | 25.0% |
| !! | GTTAGTTGAGATTCAATTTT+GGG | - | chr6_3:83792819-83792838 | None:intergenic | 25.0% |
| !! | TGTTAGTTGAGATTCAATTT+TGG | - | chr6_3:83792820-83792839 | None:intergenic | 25.0% |
| ! | ACGTTAAAAATTGGAATGTT+CGG | - | chr6_3:83793080-83793099 | None:intergenic | 25.0% |
| ! | CTAAGCCAAAAAAATTAACA+TGG | + | chr6_3:83793370-83793389 | Msa0961630:intron | 25.0% |
| !! | TCATTATCTCTCAAAGTATT+TGG | + | chr6_3:83793599-83793618 | Msa0961630:CDS | 25.0% |
| ! | TCATTTCAACAATGTACATT+TGG | + | chr6_3:83793762-83793781 | Msa0961630:three_prime_UTR | 25.0% |
| !! | GTACATTTGGAATTAATTAG+TGG | + | chr6_3:83793775-83793794 | Msa0961630:three_prime_UTR | 25.0% |
| !! | TCCTTGTTTCTAAGGTATAT+TGG | + | chr6_3:83786013-83786032 | Msa0961630:five_prime_UTR | 30.0% |
| ACCAATATACCTTAGAAACA+AGG | - | chr6_3:83786017-83786036 | None:intergenic | 30.0% | |
| AGCATTTCTTCATATGGAAA+CGG | - | chr6_3:83786138-83786157 | None:intergenic | 30.0% | |
| AATTGAATCAGATACTGAAC+CGG | + | chr6_3:83786345-83786364 | Msa0961630:intron | 30.0% | |
| CTAAAATCACACAAATTGAC+CGG | + | chr6_3:83786530-83786549 | Msa0961630:intron | 30.0% | |
| CACTTCCTTCTTTAACATTA+AGG | + | chr6_3:83786721-83786740 | Msa0961630:intron | 30.0% | |
| AGTGAGACTAAATCACATAA+TGG | + | chr6_3:83786787-83786806 | Msa0961630:CDS | 30.0% | |
| ! | AAATCACATAATGGAAGATG+TGG | + | chr6_3:83786796-83786815 | Msa0961630:CDS | 30.0% |
| !! | CCTCTCATTTTTATCTTCAA+TGG | - | chr6_3:83786828-83786847 | None:intergenic | 30.0% |
| CCATTGAAGATAAAAATGAG+AGG | + | chr6_3:83786825-83786844 | Msa0961630:CDS | 30.0% | |
| ! | AAATGAGAGGAAAAAGCTTT+TGG | + | chr6_3:83786838-83786857 | Msa0961630:CDS | 30.0% |
| CTAACAGCAAAAACAACATA+TGG | - | chr6_3:83786917-83786936 | None:intergenic | 30.0% | |
| !!! | CATATGTTGTTTTTGCTGTT+AGG | + | chr6_3:83786915-83786934 | Msa0961630:CDS | 30.0% |
| AAATGGTATTTGATGAGAAG+TGG | + | chr6_3:83787029-83787048 | Msa0961630:CDS | 30.0% | |
| TCCTCGAAATTGTAAACATA+GGG | + | chr6_3:83787119-83787138 | Msa0961630:intron | 30.0% | |
| ! | TTAACATGAGTTGAATTTGC+AGG | + | chr6_3:83787608-83787627 | Msa0961630:intron | 30.0% |
| ! | TAACATGAGTTGAATTTGCA+GGG | + | chr6_3:83787609-83787628 | Msa0961630:intron | 30.0% |
| !!! | TGCTTTAGAGATAGATTTTG+AGG | + | chr6_3:83787645-83787664 | Msa0961630:CDS | 30.0% |
| CTTTCATCTTCTATTGGAAA+AGG | + | chr6_3:83787697-83787716 | Msa0961630:CDS | 30.0% | |
| AGAGGTAATTAAAGCCATAA+GGG | + | chr6_3:83787819-83787838 | Msa0961630:intron | 30.0% | |
| TTCAATACTTGATACCCTTA+TGG | - | chr6_3:83787836-83787855 | None:intergenic | 30.0% | |
| ! | CTGTTTTCAAAATTCTGGTA+TGG | - | chr6_3:83788049-83788068 | None:intergenic | 30.0% |
| !! | CATACCAGAATTTTGAAAAC+AGG | + | chr6_3:83788047-83788066 | Msa0961630:CDS | 30.0% |
| TTCTCTATTCATGGATACTT+TGG | + | chr6_3:83788464-83788483 | Msa0961630:CDS | 30.0% | |
| AATAAGGAAGGATTAAAACC+TGG | - | chr6_3:83788526-83788545 | None:intergenic | 30.0% | |
| !! | AGGTTTTAATCCTTCCTTAT+TGG | + | chr6_3:83788525-83788544 | Msa0961630:intron | 30.0% |
| TATTTAGGAACCAATAAGGA+AGG | - | chr6_3:83788538-83788557 | None:intergenic | 30.0% | |
| ATGGTATTTAGGAACCAATA+AGG | - | chr6_3:83788542-83788561 | None:intergenic | 30.0% | |
| ATCTAACTACTTCTCTCAAT+AGG | + | chr6_3:83788570-83788589 | Msa0961630:intron | 30.0% | |
| TCTAACTACTTCTCTCAATA+GGG | + | chr6_3:83788571-83788590 | Msa0961630:intron | 30.0% | |
| ! | GTCATTATTGGAATTTTGGA+CGG | - | chr6_3:83788653-83788672 | None:intergenic | 30.0% |
| GTCCAAAATTCCAATAATGA+CGG | + | chr6_3:83788652-83788671 | Msa0961630:intron | 30.0% | |
| !! | TTCTCATGTTTTTGCCAAAT+TGG | - | chr6_3:83788749-83788768 | None:intergenic | 30.0% |
| ACTGCTCAAAATACAAAACA+CGG | - | chr6_3:83788898-83788917 | None:intergenic | 30.0% | |
| TGTGCAACACTATATAACAT+TGG | + | chr6_3:83788997-83789016 | Msa0961630:intron | 30.0% | |
| ! | TTTTCTTTATTGGGACTAAC+AGG | + | chr6_3:83789042-83789061 | Msa0961630:intron | 30.0% |
| CTCCAAAAGATTGAATTACA+AGG | + | chr6_3:83789109-83789128 | Msa0961630:CDS | 30.0% | |
| ! | GACCTTGTAATTCAATCTTT+TGG | - | chr6_3:83789114-83789133 | None:intergenic | 30.0% |
| AAAATTGAAGGTTCATACGA+TGG | - | chr6_3:83789262-83789281 | None:intergenic | 30.0% | |
| GTTTCCTTTCTATGTTTCAT+CGG | + | chr6_3:83789287-83789306 | Msa0961630:intron | 30.0% | |
| !!! | GAATGCTTAGTTTTGATGAT+AGG | - | chr6_3:83789435-83789454 | None:intergenic | 30.0% |
| GGAACTAAAATGCATAATCT+TGG | - | chr6_3:83789611-83789630 | None:intergenic | 30.0% | |
| TACCAAGATTCTTGAACTTA+TGG | + | chr6_3:83789671-83789690 | Msa0961630:CDS | 30.0% | |
| ATCCATAAGTTCAAGAATCT+TGG | - | chr6_3:83789676-83789695 | None:intergenic | 30.0% | |
| AAGATTCTTGAACTTATGGA+TGG | + | chr6_3:83789675-83789694 | Msa0961630:CDS | 30.0% | |
| TAATTTCCAATAATGAGGTC+AGG | - | chr6_3:83789705-83789724 | None:intergenic | 30.0% | |
| AAACTTGGTTTCATCCTTAA+TGG | + | chr6_3:83789734-83789753 | Msa0961630:CDS | 30.0% | |
| AAGTATTTGTGAGACTGTTT+CGG | - | chr6_3:83789872-83789891 | None:intergenic | 30.0% | |
| ATGAAGATTCAGATGCTAAA+TGG | + | chr6_3:83790046-83790065 | Msa0961630:CDS | 30.0% | |
| !!! | TGTTTTTTGTATCATCAGCA+AGG | + | chr6_3:83790270-83790289 | Msa0961630:intron | 30.0% |
| TAAAGTAGTTCTTCAATTGC+AGG | - | chr6_3:83790466-83790485 | None:intergenic | 30.0% | |
| TCGTTACTATAATATGCAAG+TGG | - | chr6_3:83790554-83790573 | None:intergenic | 30.0% | |
| CGACGATATAAAATAGTTGA+AGG | + | chr6_3:83790571-83790590 | Msa0961630:intron | 30.0% | |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr6_3:83790778-83790797 | Msa0961630:intron | 30.0% |
| TTGGGACCGAAAATTATAAA+GGG | - | chr6_3:83790787-83790806 | None:intergenic | 30.0% | |
| AAGTACAGTAAATGTAAACG+AGG | - | chr6_3:83790879-83790898 | None:intergenic | 30.0% | |
| ACTACTGTGTTCATATACAT+TGG | - | chr6_3:83790921-83790940 | None:intergenic | 30.0% | |
| GAAACCAATAATCTTCTCAA+TGG | + | chr6_3:83791432-83791451 | Msa0961630:CDS | 30.0% | |
| GACAAAGTGAAAAACATTAG+TGG | + | chr6_3:83791463-83791482 | Msa0961630:CDS | 30.0% | |
| GTAAATCTTGTAATTGTTGG+AGG | + | chr6_3:83791529-83791548 | Msa0961630:CDS | 30.0% | |
| ! | TCTCTATCTTTGGATTTTGA+AGG | - | chr6_3:83791565-83791584 | None:intergenic | 30.0% |
| ! | TTCTGTTTCTTCTCTATCTT+TGG | - | chr6_3:83791575-83791594 | None:intergenic | 30.0% |
| TCATGAACTATAATTTCAGC+TGG | - | chr6_3:83791820-83791839 | None:intergenic | 30.0% | |
| ATTATAGTTCATGATGTCTC+AGG | + | chr6_3:83791826-83791845 | Msa0961630:CDS | 30.0% | |
| ! | ATTGATTCATCTCCATTATG+AGG | - | chr6_3:83791865-83791884 | None:intergenic | 30.0% |
| GTCTTCAAAGAATCAATGAA+TGG | + | chr6_3:83791956-83791975 | Msa0961630:CDS | 30.0% | |
| ! | GTTTTCTTTGTAGCTATACA+TGG | + | chr6_3:83792174-83792193 | Msa0961630:intron | 30.0% |
| !! | TGCAAACAAAGTGTTGAATA+TGG | + | chr6_3:83792205-83792224 | Msa0961630:CDS | 30.0% |
| !! | GCAAACAAAGTGTTGAATAT+GGG | + | chr6_3:83792206-83792225 | Msa0961630:CDS | 30.0% |
| GTTGAACAAAGAACAAAAGT+TGG | + | chr6_3:83792253-83792272 | Msa0961630:CDS | 30.0% | |
| TACTCAAAGCATATTCTCAT+TGG | - | chr6_3:83792416-83792435 | None:intergenic | 30.0% | |
| GAAAAAATTCATTGCATTGC+AGG | + | chr6_3:83792635-83792654 | Msa0961630:intron | 30.0% | |
| TTTGCATAAATGACTTACCT+TGG | - | chr6_3:83792843-83792862 | None:intergenic | 30.0% | |
| ! | ATTGTGCATTTTTGAACTCA+AGG | + | chr6_3:83792993-83793012 | Msa0961630:intron | 30.0% |
| ! | TTCTATAAGCTAGTTTGAGT+CGG | + | chr6_3:83793178-83793197 | Msa0961630:intron | 30.0% |
| TTATAACGATTGTGCAGTTT+CGG | - | chr6_3:83793336-83793355 | None:intergenic | 30.0% | |
| ATCTTTATTCTGGATTACGT+TGG | + | chr6_3:83793544-83793563 | Msa0961630:CDS | 30.0% | |
| ATGAACATAAAAGCAATTCC+TGG | - | chr6_3:83793576-83793595 | None:intergenic | 30.0% | |
| GTTGAAACTGTTTCCTCAAA+TGG | + | chr6_3:83786039-83786058 | Msa0961630:exon | 35.0% | |
| ! | TGGCAAAGCATTTCTTCATA+TGG | - | chr6_3:83786144-83786163 | None:intergenic | 35.0% |
| ATATGAAGAAATGCTTTGCC+AGG | + | chr6_3:83786143-83786162 | Msa0961630:CDS | 35.0% | |
| ! | GTTGTTTAAGGTTAGGTACA+AGG | + | chr6_3:83786190-83786209 | Msa0961630:intron | 35.0% |
| TATAGTTGAACCAGTTCAAC+CGG | - | chr6_3:83786478-83786497 | None:intergenic | 35.0% | |
| GGTTCAACTATAGTTCAATC+AGG | + | chr6_3:83786486-83786505 | Msa0961630:intron | 35.0% | |
| ! | TAATAGGTTGAATCGACAAC+CGG | - | chr6_3:83786552-83786571 | None:intergenic | 35.0% |
| ATACATCCTAAGTTGTACAC+AGG | + | chr6_3:83786874-83786893 | Msa0961630:CDS | 35.0% | |
| ACAGCAAAAACAACATATGG+TGG | - | chr6_3:83786914-83786933 | None:intergenic | 35.0% | |
| TTAACATATTCCCAGAAACC+AGG | - | chr6_3:83786947-83786966 | None:intergenic | 35.0% | |
| GCAGATGATTTACAAGTAGA+TGG | + | chr6_3:83786974-83786993 | Msa0961630:CDS | 35.0% | |
| GTCCTCGAAATTGTAAACAT+AGG | + | chr6_3:83787118-83787137 | Msa0961630:intron | 35.0% | |
| GACTGATCCTTGTAATTTGA+AGG | + | chr6_3:83787383-83787402 | Msa0961630:intron | 35.0% | |
| TGACTCTTTGATAAGGCAAA+TGG | + | chr6_3:83787450-83787469 | Msa0961630:intron | 35.0% | |
| TCCATGAAATGTTAGTTCCA+TGG | + | chr6_3:83787473-83787492 | Msa0961630:intron | 35.0% | |
| AATTTGAACTTCAGCCCTTA+CGG | - | chr6_3:83787510-83787529 | None:intergenic | 35.0% | |
| ATGGCACTTTCATCTTCTAT+TGG | + | chr6_3:83787691-83787710 | Msa0961630:CDS | 35.0% | |
| AAGGACTTGACTTTACTACT+AGG | + | chr6_3:83787716-83787735 | Msa0961630:CDS | 35.0% | |
| ! | TTACCTCTCCTTGATGATTA+AGG | - | chr6_3:83787807-83787826 | None:intergenic | 35.0% |
| GAGAGGTAATTAAAGCCATA+AGG | + | chr6_3:83787818-83787837 | Msa0961630:intron | 35.0% | |
| !! | TTCAATGCTTTCTGAAGCTT+TGG | - | chr6_3:83787986-83788005 | None:intergenic | 35.0% |
| AGAGAATGGGGATTTGATAA+GGG | + | chr6_3:83788314-83788333 | Msa0961630:CDS | 35.0% | |
| AGCTGGAGATCCAATTAAAA+TGG | + | chr6_3:83788397-83788416 | Msa0961630:CDS | 35.0% | |
| !! | AAATGGAATCACTTTTCAGC+AGG | + | chr6_3:83788414-83788433 | Msa0961630:CDS | 35.0% |
| ! | CTCTCAATAGGGACATTTTA+TGG | + | chr6_3:83788582-83788601 | Msa0961630:intron | 35.0% |
| ! | TTTCAAATATTGGTCTACGG+TGG | - | chr6_3:83788629-83788648 | None:intergenic | 35.0% |
| ! | GGCTTTCAAATATTGGTCTA+CGG | - | chr6_3:83788632-83788651 | None:intergenic | 35.0% |
| TTTGGACGGCTTTCAAATAT+TGG | - | chr6_3:83788639-83788658 | None:intergenic | 35.0% | |
| ! | GTCCGTCATTATTGGAATTT+TGG | - | chr6_3:83788657-83788676 | None:intergenic | 35.0% |
| ATCCGACAAAGTGACATAAT+CGG | + | chr6_3:83788721-83788740 | Msa0961630:intron | 35.0% | |
| ! | TGATGATAGGTTCAAGTTCT+TGG | - | chr6_3:83789422-83789441 | None:intergenic | 35.0% |
| TCCTTAATGGCTTCTAAACT+TGG | + | chr6_3:83789747-83789766 | Msa0961630:CDS | 35.0% | |
| ACCAAGTTTAGAAGCCATTA+AGG | - | chr6_3:83789751-83789770 | None:intergenic | 35.0% | |
| !! | TTCTAAACTTGGTGTAACTC+AGG | + | chr6_3:83789758-83789777 | Msa0961630:CDS | 35.0% |
| AGATTAAATCAGCTGTGAAC+TGG | - | chr6_3:83790104-83790123 | None:intergenic | 35.0% | |
| AGTACTTACCAAGAAATTGC+TGG | + | chr6_3:83790153-83790172 | Msa0961630:CDS | 35.0% | |
| TTTGTATCATCAGCAAGGAT+AGG | + | chr6_3:83790275-83790294 | Msa0961630:intron | 35.0% | |
| TTTGCTTCTTCTCAGTGAAA+GGG | - | chr6_3:83790426-83790445 | None:intergenic | 35.0% | |
| TAGGGTTTATATTCTAGCGT+AGG | + | chr6_3:83790596-83790615 | Msa0961630:intron | 35.0% | |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr6_3:83790719-83790738 | None:intergenic | 35.0% |
| CTTGGGACCGAAAATTATAA+AGG | - | chr6_3:83790788-83790807 | None:intergenic | 35.0% | |
| CGTCGAATTAAAATGTGTCT+TGG | + | chr6_3:83791383-83791402 | Msa0961630:intron | 35.0% | |
| TAAAATGTGTCTTGGAACAG+TGG | + | chr6_3:83791391-83791410 | Msa0961630:intron | 35.0% | |
| CTTGCCATTGAGAAGATTAT+TGG | - | chr6_3:83791439-83791458 | None:intergenic | 35.0% | |
| CAATAATCTTCTCAATGGCA+AGG | + | chr6_3:83791437-83791456 | Msa0961630:CDS | 35.0% | |
| ! | ATGAAAGAGTACAAACTGCA+AGG | + | chr6_3:83791619-83791638 | Msa0961630:CDS | 35.0% |
| CAAACTGATAGATATCGCAA+CGG | + | chr6_3:83791664-83791683 | Msa0961630:CDS | 35.0% | |
| ! | TTTTGGTCTAACAGTGATTG+AGG | + | chr6_3:83791750-83791769 | Msa0961630:CDS | 35.0% |
| !! | CCTTGATTTGTTGCAAAAGT+TGG | - | chr6_3:83791793-83791812 | None:intergenic | 35.0% |
| ! | CCAACTTTTGCAACAAATCA+AGG | + | chr6_3:83791790-83791809 | Msa0961630:CDS | 35.0% |
| ! | ACTTTTGCAACAAATCAAGG+TGG | + | chr6_3:83791793-83791812 | Msa0961630:CDS | 35.0% |
| TGGAGATGAATCAATCAACA+AGG | + | chr6_3:83791870-83791889 | Msa0961630:CDS | 35.0% | |
| TGACAGTTAAAAAGGAACAG+AGG | + | chr6_3:83792086-83792105 | Msa0961630:intron | 35.0% | |
| GACAGTTAAAAAGGAACAGA+GGG | + | chr6_3:83792087-83792106 | Msa0961630:intron | 35.0% | |
| ! | TGGGATCAATTTATGGGTTT+TGG | + | chr6_3:83792225-83792244 | Msa0961630:CDS | 35.0% |
| CAAAGAACAAAAGTTGGCAA+AGG | + | chr6_3:83792259-83792278 | Msa0961630:CDS | 35.0% | |
| !! | AAGAAAGGTACCAATTCCTA+AGG | + | chr6_3:83792659-83792678 | Msa0961630:CDS | 35.0% |
| !!! | TGCTTTTGCTTCTGCTTTTT+TGG | - | chr6_3:83792721-83792740 | None:intergenic | 35.0% |
| ! | AGTTGAGATTCAATTTTGGG+TGG | - | chr6_3:83792816-83792835 | None:intergenic | 35.0% |
| TTGAATCTCAACTAACACCA+AGG | + | chr6_3:83792823-83792842 | Msa0961630:CDS | 35.0% | |
| AAGGTCTAATTACGCGAATT+GGG | + | chr6_3:83793012-83793031 | Msa0961630:intron | 35.0% | |
| ! | AAAATTGGAATGTTCGGTGA+AGG | - | chr6_3:83793074-83793093 | None:intergenic | 35.0% |
| AGGCTAGTGACGTTAAAAAT+TGG | - | chr6_3:83793089-83793108 | None:intergenic | 35.0% | |
| AACGACTTAGTTAGTGATTG+AGG | + | chr6_3:83793250-83793269 | Msa0961630:intron | 35.0% | |
| ACGACTTAGTTAGTGATTGA+GGG | + | chr6_3:83793251-83793270 | Msa0961630:intron | 35.0% | |
| AATCGTTATAAGTATGCCCT+AGG | + | chr6_3:83793345-83793364 | Msa0961630:intron | 35.0% | |
| ATCGTTATAAGTATGCCCTA+GGG | + | chr6_3:83793346-83793365 | Msa0961630:intron | 35.0% | |
| !!! | TTTTTTTGGCTTAGTCCCTA+GGG | - | chr6_3:83793364-83793383 | None:intergenic | 35.0% |
| !!! | ATTTTTTTGGCTTAGTCCCT+AGG | - | chr6_3:83793365-83793384 | None:intergenic | 35.0% |
| ! | TTTTGTCTTTGGATTTGCAG+CGG | + | chr6_3:83793480-83793499 | Msa0961630:intron | 35.0% |
| CAAAGTGGTGATCTTTATTC+TGG | + | chr6_3:83793534-83793553 | Msa0961630:CDS | 35.0% | |
| CTTGAAGTAGAAGCCATTTG+AGG | - | chr6_3:83786055-83786074 | None:intergenic | 40.0% | |
| !! | ATGGAAACGGCTTTGTTTCA+AGG | - | chr6_3:83786125-83786144 | None:intergenic | 40.0% |
| ATAGTTGAACCAGTTCAACC+GGG | - | chr6_3:83786477-83786496 | None:intergenic | 40.0% | |
| !! | TGAAACAGGTTGGTTGCAAA+TGG | + | chr6_3:83786755-83786774 | Msa0961630:intron | 40.0% |
| !! | GAAACAGGTTGGTTGCAAAT+GGG | + | chr6_3:83786756-83786775 | Msa0961630:intron | 40.0% |
| ! | TGAGAGGAAAAAGCTTTTGG+AGG | + | chr6_3:83786841-83786860 | Msa0961630:CDS | 40.0% |
| ! | GAGAGGAAAAAGCTTTTGGA+GGG | + | chr6_3:83786842-83786861 | Msa0961630:CDS | 40.0% |
| !! | AAGCTTTTGGAGGGCTTATT+CGG | + | chr6_3:83786851-83786870 | Msa0961630:CDS | 40.0% |
| TATTCCCAGAAACCAGGATT+AGG | - | chr6_3:83786941-83786960 | None:intergenic | 40.0% | |
| GCCCTATGTTTACAATTTCG+AGG | - | chr6_3:83787123-83787142 | None:intergenic | 40.0% | |
| GCCATGGAACTAACATTTCA+TGG | - | chr6_3:83787477-83787496 | None:intergenic | 40.0% | |
| GGCTGAAGTTCAAATTTCTC+TGG | + | chr6_3:83787514-83787533 | Msa0961630:intron | 40.0% | |
| TGATTTCACCACACCTCATA+TGG | + | chr6_3:83787672-83787691 | Msa0961630:CDS | 40.0% | |
| !! | GAAGATGAAAGTGCCATATG+AGG | - | chr6_3:83787688-83787707 | None:intergenic | 40.0% |
| TGAACTCTCACTCAATCTTG+AGG | - | chr6_3:83787749-83787768 | None:intergenic | 40.0% | |
| AAGCCTTAATCATCAAGGAG+AGG | + | chr6_3:83787801-83787820 | Msa0961630:CDS | 40.0% | |
| CAGAGAATGGGGATTTGATA+AGG | + | chr6_3:83788313-83788332 | Msa0961630:CDS | 40.0% | |
| GAGAATGGGGATTTGATAAG+GGG | + | chr6_3:83788315-83788334 | Msa0961630:CDS | 40.0% | |
| GACAATGAGAATGCTTTCTG+AGG | + | chr6_3:83788367-83788386 | Msa0961630:CDS | 40.0% | |
| TTTGGTCAAGCTGATGTTCT+AGG | + | chr6_3:83788482-83788501 | Msa0961630:CDS | 40.0% | |
| AAAACGTCGTCCGTCATTAT+TGG | - | chr6_3:83788665-83788684 | None:intergenic | 40.0% | |
| CTTTGTCGGATGTTACAACA+AGG | - | chr6_3:83788712-83788731 | None:intergenic | 40.0% | |
| !! | GACTGAGACTTTGACTTGAT+TGG | - | chr6_3:83788835-83788854 | None:intergenic | 40.0% |
| ! | GGACTGTGAACTTCTACTTT+TGG | + | chr6_3:83788868-83788887 | Msa0961630:intron | 40.0% |
| TCTTTATTGGGACTAACAGG+TGG | + | chr6_3:83789045-83789064 | Msa0961630:intron | 40.0% | |
| !! | TGATCAAGTAAGAGCACTAG+AGG | + | chr6_3:83789078-83789097 | Msa0961630:CDS | 40.0% |
| TAGCATACCACAAGAATCTG+AGG | - | chr6_3:83789148-83789167 | None:intergenic | 40.0% | |
| GTCTGATACCGAATGCAAAA+GGG | + | chr6_3:83789385-83789404 | Msa0961630:CDS | 40.0% | |
| ! | CATGTTGTCCCTTTTGCATT+CGG | - | chr6_3:83789396-83789415 | None:intergenic | 40.0% |
| ACATTCTTAGAGTCCCTTTC+TGG | + | chr6_3:83789457-83789476 | Msa0961630:CDS | 40.0% | |
| AGAAGGGAATTCTATCCCAA+TGG | + | chr6_3:83789484-83789503 | Msa0961630:CDS | 40.0% | |
| GAAGGGAATTCTATCCCAAT+GGG | + | chr6_3:83789485-83789504 | Msa0961630:CDS | 40.0% | |
| GGAAAACCTGACCTCATTAT+TGG | + | chr6_3:83789696-83789715 | Msa0961630:CDS | 40.0% | |
| !! | GTGTAACTCAGGTTAGCTTA+TGG | + | chr6_3:83789769-83789788 | Msa0961630:intron | 40.0% |
| AGACTGTTTCGGAGAGTTTA+TGG | - | chr6_3:83789861-83789880 | None:intergenic | 40.0% | |
| TTTCTCCAAAGCATGAGCAA+TGG | - | chr6_3:83790019-83790038 | None:intergenic | 40.0% | |
| CTTACCAAGAAATTGCTGGA+AGG | + | chr6_3:83790157-83790176 | Msa0961630:CDS | 40.0% | |
| TCAACCTTCCAGCAATTTCT+TGG | - | chr6_3:83790164-83790183 | None:intergenic | 40.0% | |
| GTGTGAGTTTCATATTGTCC+TGG | - | chr6_3:83790301-83790320 | None:intergenic | 40.0% | |
| CTTTGCTTCTTCTCAGTGAA+AGG | - | chr6_3:83790427-83790446 | None:intergenic | 40.0% | |
| ! | TTCAATTGCAGGTTGGAAAG+TGG | - | chr6_3:83790455-83790474 | None:intergenic | 40.0% |
| GTAGTTCTTCAATTGCAGGT+TGG | - | chr6_3:83790462-83790481 | None:intergenic | 40.0% | |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr6_3:83790718-83790737 | None:intergenic | 40.0% |
| CTAATTTACGTTGAGTCCCA+AGG | + | chr6_3:83790943-83790962 | Msa0961630:intron | 40.0% | |
| !! | GTCTTGGAACAGTGGATTTT+TGG | + | chr6_3:83791399-83791418 | Msa0961630:intron | 40.0% |
| CCAAAAGCTTCATACAATGC+TGG | - | chr6_3:83791736-83791755 | None:intergenic | 40.0% | |
| ! | CCAGCATTGTATGAAGCTTT+TGG | + | chr6_3:83791733-83791752 | Msa0961630:CDS | 40.0% |
| GCAAGACTAATCCTGAACAT+TGG | + | chr6_3:83791914-83791933 | Msa0961630:CDS | 40.0% | |
| GAGACTATGTTCCAATGTTC+AGG | - | chr6_3:83791928-83791947 | None:intergenic | 40.0% | |
| !! | TGGAACATAGTCTCTAAAGC+TGG | + | chr6_3:83791934-83791953 | Msa0961630:CDS | 40.0% |
| ! | TGACATTGGTTGAGGTTCTT+GGG | - | chr6_3:83792688-83792707 | None:intergenic | 40.0% |
| ! | TTGACATTGGTTGAGGTTCT+TGG | - | chr6_3:83792689-83792708 | None:intergenic | 40.0% |
| !!! | TTTGCTTCTGCTTTTTTGGC+AGG | - | chr6_3:83792717-83792736 | None:intergenic | 40.0% |
| AAAAGCAGAAGCTACTTCCA+AGG | + | chr6_3:83792734-83792753 | Msa0961630:CDS | 40.0% | |
| AAAGCAGAAGCTACTTCCAA+GGG | + | chr6_3:83792735-83792754 | Msa0961630:CDS | 40.0% | |
| ! | TGAAGTACCTCAAACCCATT+TGG | + | chr6_3:83792782-83792801 | Msa0961630:CDS | 40.0% |
| CAAGGTCTAATTACGCGAAT+TGG | + | chr6_3:83793011-83793030 | Msa0961630:intron | 40.0% | |
| ! | TTTAACGTCACTAGCCTAGT+TGG | + | chr6_3:83793092-83793111 | Msa0961630:intron | 40.0% |
| GGGACATGATTATCACAAGA+TGG | + | chr6_3:83793271-83793290 | Msa0961630:intron | 40.0% | |
| GAACTAGCTGCTAAACAAAG+TGG | + | chr6_3:83793519-83793538 | Msa0961630:CDS | 40.0% | |
| !! | TATGAGACAAAGGGAGTACC+TGG | - | chr6_3:83786164-83786183 | None:intergenic | 45.0% |
| ! | GGTTGGTTGCAAATGGGAAA+AGG | + | chr6_3:83786762-83786781 | Msa0961630:intron | 45.0% |
| CATCCTAAGTTGTACACAGG+AGG | + | chr6_3:83786877-83786896 | Msa0961630:CDS | 45.0% | |
| !! | TTTGCTGTTAGGCCTAATCC+TGG | + | chr6_3:83786926-83786945 | Msa0961630:CDS | 45.0% |
| TTAGGCCTAATCCTGGTTTC+TGG | + | chr6_3:83786933-83786952 | Msa0961630:CDS | 45.0% | |
| TAGGCCTAATCCTGGTTTCT+GGG | + | chr6_3:83786934-83786953 | Msa0961630:CDS | 45.0% | |
| !! | TGAAAGTGCCATATGAGGTG+TGG | - | chr6_3:83787683-83787702 | None:intergenic | 45.0% |
| GATCATTGTCAGTGTCAACG+TGG | - | chr6_3:83788151-83788170 | None:intergenic | 45.0% | |
| TGACACGACACGGAAACATT+TGG | - | chr6_3:83788200-83788219 | None:intergenic | 45.0% | |
| TTGTGAGCAGGTTCAGAGAA+TGG | + | chr6_3:83788300-83788319 | Msa0961630:intron | 45.0% | |
| TGTGAGCAGGTTCAGAGAAT+GGG | + | chr6_3:83788301-83788320 | Msa0961630:intron | 45.0% | |
| AATGGGGATTTGATAAGGGG+TGG | + | chr6_3:83788318-83788337 | Msa0961630:CDS | 45.0% | |
| ATGGGGATTTGATAAGGGGT+GGG | + | chr6_3:83788319-83788338 | Msa0961630:CDS | 45.0% | |
| !! | CTTTCTGAGGTACTAGAAGC+TGG | + | chr6_3:83788380-83788399 | Msa0961630:CDS | 45.0% |
| TGTCGGATGTTACAACAAGG+AGG | - | chr6_3:83788709-83788728 | None:intergenic | 45.0% | |
| !! | CGCCGATTATGTCACTTTGT+CGG | - | chr6_3:83788726-83788745 | None:intergenic | 45.0% |
| TGACATAATCGGCGCCAATT+TGG | + | chr6_3:83788732-83788751 | Msa0961630:intron | 45.0% | |
| TCTCAGTCGTGAGAACAAAG+AGG | + | chr6_3:83788847-83788866 | Msa0961630:intron | 45.0% | |
| TGTGAAGCCTCAGATTCTTG+TGG | + | chr6_3:83789138-83789157 | Msa0961630:CDS | 45.0% | |
| CACGCCGATGAAACATAGAA+AGG | - | chr6_3:83789294-83789313 | None:intergenic | 45.0% | |
| CGTCTGATACCGAATGCAAA+AGG | + | chr6_3:83789384-83789403 | Msa0961630:CDS | 45.0% | |
| TTCCCTTCTCTGTCCAGAAA+GGG | - | chr6_3:83789473-83789492 | None:intergenic | 45.0% | |
| ATTCCCTTCTCTGTCCAGAA+AGG | - | chr6_3:83789474-83789493 | None:intergenic | 45.0% | |
| TCACACTGCATTTACCATGC+CGG | + | chr6_3:83790315-83790334 | Msa0961630:CDS | 45.0% | |
| GGAGCAGCAATGTTGAACTT+TGG | - | chr6_3:83790379-83790398 | None:intergenic | 45.0% | |
| AAGTTCAACATTGCTGCTCC+AGG | + | chr6_3:83790379-83790398 | Msa0961630:CDS | 45.0% | |
| TAGACAGATTGATCAGCTCC+TGG | - | chr6_3:83790400-83790419 | None:intergenic | 45.0% | |
| AACTGCAAGGTCAGTTCAGA+TGG | + | chr6_3:83791632-83791651 | Msa0961630:CDS | 45.0% | |
| ! | CTTTTGTATCCGCGATGCAT+CGG | - | chr6_3:83791699-83791718 | None:intergenic | 45.0% |
| GTGATTGAGGCAATGAACTG+TGG | + | chr6_3:83791763-83791782 | Msa0961630:CDS | 45.0% | |
| CATTGCATTGCAGGCAAGAA+AGG | + | chr6_3:83792644-83792663 | Msa0961630:intron | 45.0% | |
| ! | TCTTGGGGTACCTTAGGAAT+TGG | - | chr6_3:83792672-83792691 | None:intergenic | 45.0% |
| ! | GACATTGGTTGAGGTTCTTG+GGG | - | chr6_3:83792687-83792706 | None:intergenic | 45.0% |
| ! | GGAGTTGTTGACATTGGTTG+AGG | - | chr6_3:83792696-83792715 | None:intergenic | 45.0% |
| TTGGCAGGAGTTGTTGACAT+TGG | - | chr6_3:83792702-83792721 | None:intergenic | 45.0% | |
| AAGCAGAAGCTACTTCCAAG+GGG | + | chr6_3:83792736-83792755 | Msa0961630:CDS | 45.0% | |
| ! | AATGCTGCCAAATGGGTTTG+AGG | - | chr6_3:83792792-83792811 | None:intergenic | 45.0% |
| CAGCGGTGAATCTTCAAGTA+AGG | + | chr6_3:83793497-83793516 | Msa0961630:intron | 45.0% | |
| !!! | TTTTTTTTCATTATAAAAAA+TGG | + | chr6_3:83787585-83787604 | Msa0961630:intron | 5.0% |
| !!! | ATAATTTGTAAAAAAAAAAT+TGG | - | chr6_3:83789207-83789226 | None:intergenic | 5.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | + | chr6_3:83790756-83790775 | Msa0961630:intron | 5.0% |
| !!! | TATTATAAAAAAAAGAATTT+TGG | - | chr6_3:83792575-83792594 | None:intergenic | 5.0% |
| !! | CGGCTTTGTTTCAAGGCATC+AGG | - | chr6_3:83786118-83786137 | None:intergenic | 50.0% |
| ! | TACTGAACCGGCGAGACTTT+TGG | + | chr6_3:83786357-83786376 | Msa0961630:intron | 50.0% |
| ! | ACTGAACCGGCGAGACTTTT+GGG | + | chr6_3:83786358-83786377 | Msa0961630:intron | 50.0% |
| CTATGACCCAAAAGTCTCGC+CGG | - | chr6_3:83786367-83786386 | None:intergenic | 50.0% | |
| ! | GAAAGTTGGTTGAACCGACC+CGG | + | chr6_3:83786456-83786475 | Msa0961630:intron | 50.0% |
| TTGAACCAGTTCAACCGGGT+CGG | - | chr6_3:83786473-83786492 | None:intergenic | 50.0% | |
| CTGCCTCCTGTGTACAACTT+AGG | - | chr6_3:83786883-83786902 | None:intergenic | 50.0% | |
| GTGAGCAGGTTCAGAGAATG+GGG | + | chr6_3:83788302-83788321 | Msa0961630:intron | 50.0% | |
| TGGGGATTTGATAAGGGGTG+GGG | + | chr6_3:83788320-83788339 | Msa0961630:CDS | 50.0% | |
| !! | GTTCTAGGATTGCCAGACAC+TGG | + | chr6_3:83788497-83788516 | Msa0961630:CDS | 50.0% |
| TCAGACGTGTAACCTGTGCA+TGG | - | chr6_3:83789371-83789390 | None:intergenic | 50.0% | |
| AGTCCCTTTCTGGACAGAGA+AGG | + | chr6_3:83789467-83789486 | Msa0961630:CDS | 50.0% | |
| GTCCCTTTCTGGACAGAGAA+GGG | + | chr6_3:83789468-83789487 | Msa0961630:CDS | 50.0% | |
| ATCGAATCGCGACACCCATT+GGG | - | chr6_3:83789502-83789521 | None:intergenic | 50.0% | |
| TATCGAATCGCGACACCCAT+TGG | - | chr6_3:83789503-83789522 | None:intergenic | 50.0% | |
| GGCAACCATTGCTCATGCTT+TGG | + | chr6_3:83790011-83790030 | Msa0961630:intron | 50.0% | |
| ATCATCAGCAAGGATAGGCC+AGG | + | chr6_3:83790280-83790299 | Msa0961630:intron | 50.0% | |
| CACACTGCATTTACCATGCC+GGG | + | chr6_3:83790316-83790335 | Msa0961630:CDS | 50.0% | |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr6_3:83790702-83790721 | Msa0961630:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr6_3:83790703-83790722 | Msa0961630:intron | 50.0% | |
| ACATTAGTGGCCTAGTCGAG+TGG | + | chr6_3:83791476-83791495 | Msa0961630:CDS | 50.0% | |
| AGAGCTTTACCGATGCATCG+CGG | + | chr6_3:83791687-83791706 | Msa0961630:CDS | 50.0% | |
| CGATGCATCGCGGATACAAA+AGG | + | chr6_3:83791697-83791716 | Msa0961630:CDS | 50.0% | |
| ! | TGAGGTTCTTGGGGTACCTT+AGG | - | chr6_3:83792678-83792697 | None:intergenic | 50.0% |
| GCATGATGCAGCACAAGCAA+AGG | + | chr6_3:83792758-83792777 | Msa0961630:CDS | 50.0% | |
| ! | GGGTGGTAATGCTGCCAAAT+GGG | - | chr6_3:83792799-83792818 | None:intergenic | 50.0% |
| ! | TGGGTGGTAATGCTGCCAAA+TGG | - | chr6_3:83792800-83792819 | None:intergenic | 50.0% |
| ! | ACTAGCCTAGTTGGCCAATG+TGG | + | chr6_3:83793101-83793120 | Msa0961630:intron | 50.0% |
| GCAACACTTGTTCGCCACAT+TGG | - | chr6_3:83793118-83793137 | None:intergenic | 50.0% | |
| ! | GGATTACGTTGGTTGCTTCC+AGG | + | chr6_3:83793555-83793574 | Msa0961630:CDS | 50.0% |
| TTGAACCGACCCGGTTGAAC+TGG | + | chr6_3:83786465-83786484 | Msa0961630:intron | 55.0% | |
| TTACGGTCACGCTCTTGCCA+TGG | - | chr6_3:83787493-83787512 | None:intergenic | 55.0% | |
| ! | ATGGCAAGAGCGTGACCGTA+AGG | + | chr6_3:83787492-83787511 | Msa0961630:intron | 55.0% |
| ! | TGGCAAGAGCGTGACCGTAA+GGG | + | chr6_3:83787493-83787512 | Msa0961630:intron | 55.0% |
| ! | TTCCGTGTCGTGTCACTGTG+CGG | + | chr6_3:83788205-83788224 | Msa0961630:intron | 55.0% |
| GTGGGGAAACACTGCAGGAA+GGG | + | chr6_3:83788337-83788356 | Msa0961630:CDS | 55.0% | |
| CTAGGATTGCCAGACACTGG+AGG | + | chr6_3:83788500-83788519 | Msa0961630:CDS | 55.0% | |
| AAAACCTGGCCTCCAGTGTC+TGG | - | chr6_3:83788512-83788531 | None:intergenic | 55.0% | |
| TGGTGTACCGTCTCGACATG+TGG | + | chr6_3:83788602-83788621 | Msa0961630:intron | 55.0% | |
| CGCTAACGTGTTCCATGCAC+AGG | + | chr6_3:83789356-83789375 | Msa0961630:intron | 55.0% | |
| GAGACTACGCGACAAAGTCC+CGG | - | chr6_3:83790337-83790356 | None:intergenic | 55.0% | |
| GGACTTTGTCGCGTAGTCTC+AGG | + | chr6_3:83790337-83790356 | Msa0961630:CDS | 55.0% | |
| TCTTCGCGAACCACTCGACT+AGG | - | chr6_3:83791489-83791508 | None:intergenic | 55.0% | |
| TTGTGCTGCATCATGCCCCT+TGG | - | chr6_3:83792754-83792773 | None:intergenic | 55.0% | |
| GTTCGCCACATTGGCCAACT+AGG | - | chr6_3:83793109-83793128 | None:intergenic | 55.0% | |
| CAGATCTGTGTGCGTCACGT+AGG | + | chr6_3:83793209-83793228 | Msa0961630:intron | 55.0% | |
| GTCCGCACAGTGACACGACA+CGG | - | chr6_3:83788210-83788229 | None:intergenic | 60.0% | |
| AAGGGGTGGGGAAACACTGC+AGG | + | chr6_3:83788332-83788351 | Msa0961630:CDS | 60.0% | |
| GGTGGGGAAACACTGCAGGA+AGG | + | chr6_3:83788336-83788355 | Msa0961630:CDS | 60.0% | |
| ATTGCCAGACACTGGAGGCC+AGG | + | chr6_3:83788505-83788524 | Msa0961630:CDS | 60.0% | |
| CGGTGGACCACATGTCGAGA+CGG | - | chr6_3:83788612-83788631 | None:intergenic | 60.0% | |
| TACGCGACAAAGTCCCGGCA+TGG | - | chr6_3:83790332-83790351 | None:intergenic | 60.0% | |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr6_3:83790713-83790732 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 83785976 | 83793825 | 83785976 | ID=Msa0961630;Name=Msa0961630 |
| chr6_3 | mRNA | 83785976 | 83793825 | 83785976 | ID=Msa0961630-mRNA-1;Parent=Msa0961630;Name=Msa0961630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=82|1|1|1|1|1|14|178|914 |
| chr6_3 | exon | 83785976 | 83786164 | 83785976 | ID=Msa0961630-mRNA-1:exon:15022;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83786763 | 83787050 | 83786763 | ID=Msa0961630-mRNA-1:exon:15023;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83787630 | 83787822 | 83787630 | ID=Msa0961630-mRNA-1:exon:15024;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83787950 | 83788068 | 83787950 | ID=Msa0961630-mRNA-1:exon:15025;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83788310 | 83788526 | 83788310 | ID=Msa0961630-mRNA-1:exon:15026;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83789064 | 83789159 | 83789064 | ID=Msa0961630-mRNA-1:exon:15027;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83789378 | 83789551 | 83789378 | ID=Msa0961630-mRNA-1:exon:15028;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83789663 | 83789779 | 83789663 | ID=Msa0961630-mRNA-1:exon:15029;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83790012 | 83790178 | 83790012 | ID=Msa0961630-mRNA-1:exon:15030;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83790288 | 83790512 | 83790288 | ID=Msa0961630-mRNA-1:exon:15031;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83791411 | 83791977 | 83791411 | ID=Msa0961630-mRNA-1:exon:15032;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83792187 | 83792325 | 83792187 | ID=Msa0961630-mRNA-1:exon:15033;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83792657 | 83792844 | 83792657 | ID=Msa0961630-mRNA-1:exon:15034;Parent=Msa0961630-mRNA-1 |
| chr6_3 | exon | 83793500 | 83793825 | 83793500 | ID=Msa0961630-mRNA-1:exon:15035;Parent=Msa0961630-mRNA-1 |
| chr6_3 | five_prime_UTR | 83785976 | 83786057 | 83785976 | ID=Msa0961630-mRNA-1:five_prime_utr;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83786058 | 83786164 | 83786058 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83786763 | 83787050 | 83786763 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83787630 | 83787822 | 83787630 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83787950 | 83788068 | 83787950 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83788310 | 83788526 | 83788310 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83789064 | 83789159 | 83789064 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83789378 | 83789551 | 83789378 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83789663 | 83789779 | 83789663 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83790012 | 83790178 | 83790012 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83790288 | 83790512 | 83790288 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83791411 | 83791977 | 83791411 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83792187 | 83792325 | 83792187 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83792657 | 83792844 | 83792657 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | CDS | 83793500 | 83793647 | 83793500 | ID=Msa0961630-mRNA-1:cds;Parent=Msa0961630-mRNA-1 |
| chr6_3 | three_prime_UTR | 83793648 | 83793825 | 83793648 | ID=Msa0961630-mRNA-1:three_prime_utr;Parent=Msa0961630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
