AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0922980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922980 MtrunA17_Chr6g0481131 97.914 911 18 1 1 910 1 911 0.0 1860
Msa0922980 MtrunA17_Chr6g0481171 96.807 783 20 2 133 910 5 787 0.0 1576
Msa0922980 MtrunA17_Chr5g0433761 72.760 826 224 1 6 831 4 828 0.0 1301
Msa0922980 MtrunA17_Chr3g0109841 70.843 830 238 2 5 830 3 832 0.0 1268
Msa0922980 MtrunA17_Chr7g0269581 56.554 801 344 2 11 811 9 805 0.0 948
Msa0922980 MtrunA17_Chr4g0070011 55.583 806 352 4 5 809 2 802 0.0 947
Msa0922980 MtrunA17_Chr2g0301621 54.851 804 357 4 7 809 2 800 0.0 944
Msa0922980 MtrunA17_Chr1g0195241 56.494 770 334 1 38 807 18 786 0.0 919
Msa0922980 MtrunA17_Chr6g0481241 82.645 242 19 2 638 879 1 219 6.94e-134 400
Msa0922980 MtrunA17_Chr6g0481261 98.058 103 2 0 638 740 1 103 8.38e-68 220
Msa0922980 MtrunA17_Chr6g0481271 69.799 149 31 4 770 910 1 143 2.10e-54 185
Msa0922980 MtrunA17_Chr6g0481211 88.542 96 7 1 819 910 1 96 1.23e-48 167
Msa0922980 MtrunA17_Chr6g0481151 94.521 73 4 0 568 640 24 96 1.59e-40 144
Msa0922980 MtrunA17_Chr5g0443091 26.195 523 321 19 285 757 171 678 2.53e-35 145
Msa0922980 MtrunA17_Chr3g0096241 25.430 523 322 16 285 757 167 671 6.88e-35 144
Msa0922980 MtrunA17_Chr4g0064501 25.795 566 331 21 265 767 125 664 3.35e-34 141
Msa0922980 MtrunA17_Chr6g0481161 95.455 44 2 0 690 733 1 44 2.13e-25 99.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922980 AT1G73370.3 72.405 819 224 1 1 819 1 817 0.0 1278
Msa0922980 AT1G73370.1 72.405 819 224 1 1 819 1 817 0.0 1278
Msa0922980 AT1G73370.2 72.903 775 208 1 45 819 1 773 0.0 1214
Msa0922980 AT5G37180.1 68.797 798 246 1 12 809 5 799 0.0 1186
Msa0922980 AT5G37180.2 74.959 611 153 0 199 809 1 611 0.0 988
Msa0922980 AT4G02280.1 56.875 800 344 1 9 808 6 804 0.0 967
Msa0922980 AT5G49190.1 55.444 799 355 1 11 809 5 802 0.0 941
Msa0922980 AT5G49190.2 56.572 776 336 1 34 809 18 792 0.0 934
Msa0922980 AT5G20830.3 54.938 810 359 4 3 811 2 806 0.0 924
Msa0922980 AT5G20830.2 54.938 810 359 4 3 811 2 806 0.0 924
Msa0922980 AT5G20830.1 54.938 810 359 4 3 811 2 806 0.0 924
Msa0922980 AT3G43190.2 54.950 808 358 4 3 809 2 804 0.0 922
Msa0922980 AT3G43190.1 54.950 808 358 4 3 809 2 804 0.0 922
Msa0922980 AT5G49190.3 58.367 735 305 1 75 809 3 736 0.0 920
Msa0922980 AT5G37180.3 76.673 553 129 0 257 809 1 553 0.0 919
Msa0922980 AT4G10120.4 25.813 523 321 17 285 769 23 516 7.06e-36 147
Msa0922980 AT4G10120.2 25.813 523 321 17 285 769 197 690 1.11e-35 147
Msa0922980 AT4G10120.3 25.813 523 321 17 285 769 197 690 1.11e-35 147
Msa0922980 AT4G10120.1 25.813 523 321 17 285 769 197 690 1.11e-35 147
Msa0922980 AT1G04920.1 26.629 537 330 20 281 767 168 690 9.52e-35 144
Msa0922980 AT4G10120.5 25.299 502 310 15 304 769 17 489 2.45e-34 142
Msa0922980 AT5G11110.1 25.556 540 328 20 285 783 177 683 2.53e-33 139
Msa0922980 AT5G20280.1 25.365 548 322 20 281 778 166 676 1.45e-32 137
Msa0922980 AT1G78800.1 27.542 236 141 9 540 767 176 389 7.13e-12 68.9

Find 179 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTATTCATGGATATTT+TGG 0.085644 6_2:+62712420 Msa0922980:CDS
TCATTATCTCTCTAAGTATT+TGG 0.124183 6_2:+62717155 Msa0922980:CDS
TTGAATATGGGATCAATTTA+TGG 0.132045 6_2:+62715765 Msa0922980:CDS
CAAAGTGGTGATCTTTATTC+TGG 0.176068 6_2:+62717090 Msa0922980:CDS
AAACTTGGTTTCATCCTTAA+TGG 0.187010 6_2:+62713669 Msa0922980:CDS
TGGGATCAATTTATGGGTTT+TGG 0.205721 6_2:+62715772 Msa0922980:CDS
CTTGCCATTGAGAAGATTAT+AGG 0.209492 6_2:-62714980 None:intergenic
TTGACATTGGTTGTGGTTCT+TGG 0.220747 6_2:-62716270 None:intergenic
TGTTAGCTTAGATTCAATTT+TGG 0.228497 6_2:-62716389 None:intergenic
TGCAAACAAAGTGTTGAATA+TGG 0.228861 6_2:+62715752 Msa0922980:CDS
TACCAAGATTCTTGAACTTA+TGG 0.238387 6_2:+62713606 Msa0922980:CDS
TTACCTCTCCTTGATGATTA+AGG 0.239757 6_2:-62711770 None:intergenic
TTAGGCCTAATCCAGGTTTC+TGG 0.246738 6_2:+62710899 Msa0922980:CDS
ACATTCTTAGAGTCCCTTTC+TGG 0.252632 6_2:+62713392 Msa0922980:CDS
ACCAAGTTTAGAAGCCATTA+AGG 0.255408 6_2:-62713683 None:intergenic
GGAAAACCTGACCTCATTAT+TGG 0.261160 6_2:+62713631 Msa0922980:CDS
TCAACCTTCCAGCAATTTCT+TGG 0.267722 6_2:-62714203 None:intergenic
GGCCTTGCAACTCAATCTTT+TGG 0.279108 6_2:-62713068 None:intergenic
ATGGCACTTTCATCTTCTAT+TGG 0.281086 6_2:+62711657 Msa0922980:CDS
GACATTATGTTCCAGTGTTC+AGG 0.284963 6_2:-62715469 None:intergenic
AGCAGGAGATCCAATTAAAA+TGG 0.288529 6_2:+62712353 Msa0922980:CDS
TGAGCAAATCTTTCTAAATA+AGG 0.291781 6_2:-62713463 None:intergenic
ATGAAGATTCAGATGCTAAA+TGG 0.297761 6_2:+62714088 Msa0922980:CDS
GGATTACGTTGGTTGCTTCC+AGG 0.317665 6_2:+62717111 Msa0922980:CDS
TTTGGCCAAGCAGATGTTCT+AGG 0.324417 6_2:+62712438 Msa0922980:CDS
TCATTTCAACATTGTACATT+TGG 0.325535 6_2:+62717318 Msa0922980:three_prime_UTR
TCCTTAATGGCTTCTAAACT+TGG 0.326870 6_2:+62713682 Msa0922980:CDS
TTTCATATTGATCCTCATAA+TGG 0.327462 6_2:+62715394 Msa0922980:CDS
GAATCTGAGGCTTCACATTA+AGG 0.333564 6_2:-62713089 None:intergenic
TTCAATGCTTTCTGAAGCTT+TGG 0.336752 6_2:-62711940 None:intergenic
TGACATTGGTTGTGGTTCTT+GGG 0.341000 6_2:-62716269 None:intergenic
CGGCTTTGTTTCAAGGCATC+AGG 0.345200 6_2:-62710081 None:intergenic
TAGAGAATGGGGATTTGATA+AGG 0.349353 6_2:+62712269 Msa0922980:CDS
TGGCAAAGCATTTCTTCATA+TGG 0.350848 6_2:-62710107 None:intergenic
TGAATATGGGATCAATTTAT+GGG 0.351676 6_2:+62715766 Msa0922980:CDS
TGGGTGGTAATGCTGCCAAC+TGG 0.353236 6_2:-62716369 None:intergenic
CCAGCACTGTATGAAGCTTT+TGG 0.355508 6_2:+62715277 Msa0922980:CDS
ATCCATAAGTTCAAGAATCT+TGG 0.355620 6_2:-62713608 None:intergenic
TTGGTAAATCTTGTAATTGT+TGG 0.358781 6_2:+62715070 Msa0922980:CDS
TGTGGTTCTTGGGGTACCTT+AGG 0.359949 6_2:-62716259 None:intergenic
TAAAGTGAATGCAGATGATT+TGG 0.361708 6_2:+62710930 Msa0922980:CDS
TCTTGGGGTACCTTAGGAAT+TGG 0.371733 6_2:-62716253 None:intergenic
ATAACAATGTTGAACATGTT+TGG 0.375732 6_2:-62712396 None:intergenic
TAATCTTCAATTTAGGAACT+TGG 0.378334 6_2:+62715851 Msa0922980:CDS
GGCAACCATTGCTCATGCTT+TGG 0.379572 6_2:+62714053 Msa0922980:intron
TGAAACAGGTTGGTTGCAAA+TGG 0.380181 6_2:+62710721 Msa0922980:intron
GGTCAATCTTTGCTTCTTCT+CGG 0.380664 6_2:-62714476 None:intergenic
ATGGAAACGGCTTTGTTTCA+AGG 0.384267 6_2:-62710088 None:intergenic
TGAAGAACTACTTTATAGTA+AGG 0.393754 6_2:+62714516 Msa0922980:CDS
TATTGAAATTGTTCCTCAAA+TGG 0.400675 6_2:+62710005 Msa0922980:exon
CCTTGATTTGTTGCAAAAGT+TGG 0.402280 6_2:-62715334 None:intergenic
TGATTTCACCACACCTCATA+TGG 0.403948 6_2:+62711638 Msa0922980:CDS
CTGTGAGCAGGTTTAGAGAA+TGG 0.406425 6_2:+62712256 Msa0922980:intron
AAAACCTGGCCTCCAGTGTC+TGG 0.410753 6_2:-62712465 None:intergenic
CATTGCTTTGCAGGCAAGAA+AGG 0.413703 6_2:+62716228 Msa0922980:intron
CTTTGCTTCTTCTCGGTGAA+AGG 0.416303 6_2:-62714469 None:intergenic
ATTGATTCATCTCCATTATG+AGG 0.417122 6_2:-62715406 None:intergenic
AGAGAATGGGGATTTGATAA+GGG 0.418726 6_2:+62712270 Msa0922980:CDS
GTACATTTGGAATTAATTAG+TGG 0.421448 6_2:+62717331 Msa0922980:three_prime_UTR
ATCATTGTTGATGGTGTCTC+AGG 0.423066 6_2:+62715370 Msa0922980:CDS
CTTTCATCTTCTATTGGAAA+AGG 0.424148 6_2:+62711663 Msa0922980:CDS
TAGGCCTAATCCAGGTTTCT+GGG 0.431601 6_2:+62710900 Msa0922980:CDS
ACAATAAAGTTGAAATAAGA+AGG 0.431928 6_2:-62717268 None:intergenic
AAATTATACTGATGGAAACT+TGG 0.433245 6_2:+62713654 Msa0922980:CDS
TGTGAGCAGGTTTAGAGAAT+GGG 0.435185 6_2:+62712257 Msa0922980:intron
GCAGATGATTTGGAAGTAGA+TGG 0.435227 6_2:+62710940 Msa0922980:CDS
ATGAACATAAAAGCAATTCC+TGG 0.435819 6_2:-62717129 None:intergenic
ATCGAATCGCGACACCCATT+GGG 0.436391 6_2:-62713434 None:intergenic
CGTCTGATACCGAATGCAAA+AGG 0.436501 6_2:+62713319 Msa0922980:CDS
GGACTTTGTCGCGTAGTCTC+TGG 0.439215 6_2:+62714382 Msa0922980:CDS
ACTATAAAGTAGTTCTTCAA+TGG 0.445434 6_2:-62714512 None:intergenic
ATCGAAAGACAGAGAAGAAA+CGG 0.446782 6_2:+62715114 Msa0922980:CDS
CAGTGGTGAATCTTCAAGTA+AGG 0.447365 6_2:+62717053 Msa0922980:intron
AATGGGGATTTGATAAGGGC+TGG 0.447897 6_2:+62712274 Msa0922980:CDS
GTAAATCTTGTAATTGTTGG+AGG 0.448003 6_2:+62715073 Msa0922980:CDS
ATACTTGAAATACAAGGAAA+TGG 0.459100 6_2:+62710978 Msa0922980:CDS
ATTGCCAGACACTGGAGGCC+AGG 0.463699 6_2:+62712461 Msa0922980:CDS
GCAAACAAAGTGTTGAATAT+GGG 0.464065 6_2:+62715753 Msa0922980:CDS
ATGGGGATTTGATAAGGGCT+GGG 0.465930 6_2:+62712275 Msa0922980:CDS
GGAGCAGCAATGTTGAACTT+TGG 0.467131 6_2:-62714421 None:intergenic
TATCGAATCGCGACACCCAT+TGG 0.467975 6_2:-62713435 None:intergenic
TATTCCCAGAAACCTGGATT+AGG 0.468624 6_2:-62710904 None:intergenic
TTATTTAGAAAGATTTGCTC+AGG 0.470017 6_2:+62713465 Msa0922980:CDS
TAATTTCCAATAATGAGGTC+AGG 0.474083 6_2:-62713637 None:intergenic
GGTTGGTTGCAAATGGGAAA+AGG 0.475033 6_2:+62710728 Msa0922980:intron
AGTACATACCAAGAAATTGC+TGG 0.475992 6_2:+62714195 Msa0922980:CDS
CTTGAAGTAGAAGCCATTTG+AGG 0.483755 6_2:-62710018 None:intergenic
AAGTTCAACATTGCTGCTCC+AGG 0.484663 6_2:+62714424 Msa0922980:CDS
AGCATTTCTTCATATGGAAA+CGG 0.485069 6_2:-62710101 None:intergenic
TTTGCTGTTAGGCCTAATCC+AGG 0.486027 6_2:+62710892 Msa0922980:CDS
CGATGTATCGCAGACACAAA+AGG 0.492687 6_2:+62715241 Msa0922980:CDS
TAAAGTAGTTCTTCAATGGC+AGG 0.495336 6_2:-62714508 None:intergenic
AACTGCAAGGTCAGTTCAGA+TGG 0.495963 6_2:+62715176 Msa0922980:CDS
CTGCCTCCTGTGTACAACTT+AGG 0.496308 6_2:-62710846 None:intergenic
TTAACATATTCCCAGAAACC+TGG 0.497442 6_2:-62710910 None:intergenic
AGTGAGACTAAATCACATAA+TGG 0.498159 6_2:+62710753 Msa0922980:CDS
TTCCCTTCTCTGTCCAGAAA+GGG 0.498281 6_2:-62713405 None:intergenic
CACACTGCATTTACCATGCC+GGG 0.502984 6_2:+62714361 Msa0922980:CDS
ATTATTGGAAATTATACTGA+TGG 0.504515 6_2:+62713646 Msa0922980:CDS
CTGGGGAAACACTGCAGGAA+GGG 0.509076 6_2:+62712293 Msa0922980:CDS
ATATGAAGAAATGCTTTGCC+AGG 0.509721 6_2:+62710109 Msa0922980:CDS
GAAACAGGTTGGTTGCAAAT+GGG 0.514671 6_2:+62710722 Msa0922980:intron
AATGCTGCCAACTGGGTTTG+AGG 0.514762 6_2:-62716361 None:intergenic
TTTGCTTCTTCTCGGTGAAA+GGG 0.515058 6_2:-62714468 None:intergenic
TTATTAAGCCTTAATCATCA+AGG 0.516137 6_2:+62711762 Msa0922980:CDS
TAGACAGATTGATCAGCTCC+TGG 0.517673 6_2:-62714442 None:intergenic
ATCATCAGCAAGGATAGGCC+AGG 0.517818 6_2:+62714325 Msa0922980:intron
ATTCCCTTCTCTGTCCAGAA+AGG 0.522424 6_2:-62713406 None:intergenic
AAGATTCTTGAACTTATGGA+TGG 0.523540 6_2:+62713610 Msa0922980:CDS
TTTGTATCATCAGCAAGGAT+AGG 0.525118 6_2:+62714320 Msa0922980:intron
CCAGCTGAAATCATTGTTGA+TGG 0.526521 6_2:+62715361 Msa0922980:CDS
CTTTCTGAGGTACTAGAAGC+AGG 0.528208 6_2:+62712336 Msa0922980:CDS
TTCTAAACTTGGTGTAACTC+AGG 0.528300 6_2:+62713693 Msa0922980:CDS
TCTTCGCGAACCACTCGACT+AGG 0.529092 6_2:-62715030 None:intergenic
CTTAATAAGTAATTAAGCAA+TGG 0.529556 6_2:-62711747 None:intergenic
GGAGTTGTTGACATTGGTTG+TGG 0.530294 6_2:-62716277 None:intergenic
TTGTGCTGCATCATGCCCCT+TGG 0.530931 6_2:-62716323 None:intergenic
GTTGAACAAAGAACAAAAGT+TGG 0.532400 6_2:+62715800 Msa0922980:CDS
CCATCAACAATGATTTCAGC+TGG 0.532974 6_2:-62715361 None:intergenic
GTGTGAGTTTCATACTGCCC+TGG 0.533705 6_2:-62714343 None:intergenic
GTCTTCAAAGAATCAATGAA+TGG 0.533715 6_2:+62715500 Msa0922980:CDS
ATCTTTATTCTGGATTACGT+TGG 0.533971 6_2:+62717100 Msa0922980:CDS
TTGTATTTCAAGTATTCTGA+AGG 0.535677 6_2:-62710970 None:intergenic
GAAACCTATAATCTTCTCAA+TGG 0.538316 6_2:+62714976 Msa0922980:CDS
GAAGATGAAAGTGCCATATG+AGG 0.538755 6_2:-62711651 None:intergenic
AAGGGCTGGGGAAACACTGC+AGG 0.541174 6_2:+62712288 Msa0922980:CDS
GTTCTAGGATTGCCAGACAC+TGG 0.541620 6_2:+62712453 Msa0922980:CDS
GACATTGGTTGTGGTTCTTG+GGG 0.542407 6_2:-62716268 None:intergenic
GAAGGGAATTCTATCCCAAT+GGG 0.543801 6_2:+62713420 Msa0922980:CDS
GTCCCTTTCTGGACAGAGAA+GGG 0.546251 6_2:+62713403 Msa0922980:CDS
CTACTAGGATCTTGACCTCA+AGG 0.547581 6_2:+62711697 Msa0922980:CDS
AAATCACATAATGGAAGATG+TGG 0.551952 6_2:+62710762 Msa0922980:CDS
AGTCCCTTTCTGGACAGAGA+AGG 0.554342 6_2:+62713402 Msa0922980:CDS
TCACACTGCATTTACCATGC+CGG 0.555687 6_2:+62714360 Msa0922980:CDS
GGGTGGTAATGCTGCCAACT+GGG 0.556750 6_2:-62716368 None:intergenic
CCAAAAGCTTCATACAGTGC+TGG 0.557579 6_2:-62715277 None:intergenic
AAAGCAGAAGCTACTTCCAA+GGG 0.561938 6_2:+62716307 Msa0922980:CDS
AAAAGCAGAAGCTACTTCCA+AGG 0.562076 6_2:+62716306 Msa0922980:CDS
TTGGCAGGAGTTGTTGACAT+TGG 0.562547 6_2:-62716283 None:intergenic
GTCTGATACCGAATGCAAAA+GGG 0.564856 6_2:+62713320 Msa0922980:CDS
AAGAAAGGTACCAATTCCTA+AGG 0.565800 6_2:+62716243 Msa0922980:CDS
TGGGGATTTGATAAGGGCTG+GGG 0.568733 6_2:+62712276 Msa0922980:CDS
GAACAAGAGACTAAGAAGCT+TGG 0.571888 6_2:+62715051 Msa0922980:CDS
AAATGGTATTTGATGAGAAG+TGG 0.572044 6_2:+62710995 Msa0922980:CDS
CTATAATCTTCTCAATGGCA+AGG 0.572371 6_2:+62714981 Msa0922980:CDS
CAGTATAATTTCCAATAATG+AGG 0.573217 6_2:-62713642 None:intergenic
TGGAACATAATGTCTAAAGC+TGG 0.574022 6_2:+62715478 Msa0922980:CDS
GAGACTACGCGACAAAGTCC+CGG 0.574380 6_2:-62714379 None:intergenic
AGAAGGGAATTCTATCCCAA+TGG 0.579688 6_2:+62713419 Msa0922980:CDS
GCTGGGGAAACACTGCAGGA+AGG 0.584577 6_2:+62712292 Msa0922980:CDS
GTGAGCAGGTTTAGAGAATG+GGG 0.586889 6_2:+62712258 Msa0922980:intron
CAAAGAACAAAAGTTGGCAA+AGG 0.588238 6_2:+62715806 Msa0922980:CDS
GCAATCCTAGAACATCTGCT+TGG 0.596552 6_2:-62712443 None:intergenic
TTGAATCTAAGCTAACATCA+AGG 0.597124 6_2:+62716395 Msa0922980:CDS
ATGAAAGAATACAAACTGCA+AGG 0.608532 6_2:+62715163 Msa0922980:CDS
TTCAGAATACTTGAAATACA+AGG 0.609609 6_2:+62710972 Msa0922980:CDS
CTCCAAAAGATTGAGTTGCA+AGG 0.616584 6_2:+62713066 Msa0922980:CDS
TGTGAAGCCTCAGATTCTTG+TGG 0.617074 6_2:+62713095 Msa0922980:CDS
CTTCTCCAAAGCATGAGCAA+TGG 0.622761 6_2:-62714058 None:intergenic
TAGCATACCACAAGAATCTG+AGG 0.626563 6_2:-62713102 None:intergenic
TTCAATGGCAGGTTGAAAAG+CGG 0.627989 6_2:-62714497 None:intergenic
GCAAGACTAATCCTGAACAC+TGG 0.630017 6_2:+62715458 Msa0922980:CDS
GTCATTGAGGCAATGAACTG+TGG 0.630579 6_2:+62715307 Msa0922980:CDS
TGAAGTACCTCAAACCCAGT+TGG 0.633135 6_2:+62716354 Msa0922980:CDS
AGGTCAGTTCAGATGGATTG+CGG 0.634342 6_2:+62715183 Msa0922980:CDS
TCATCAGCAAGGATAGGCCA+GGG 0.636461 6_2:+62714326 Msa0922980:intron
TGGTGTGTCTTTGTGATGTG+CGG 0.642792 6_2:-62711983 None:intergenic
GACAATGAGAATGCTTTCTG+AGG 0.650408 6_2:+62712323 Msa0922980:CDS
CATCCTAAGTTGTACACAGG+AGG 0.653499 6_2:+62710843 Msa0922980:CDS
TGAACTCTCACTCAACCTTG+AGG 0.653799 6_2:-62711712 None:intergenic
ACTAGTTATGATAAAATCAG+CGG 0.654491 6_2:-62714175 None:intergenic
AAGCCTTAATCATCAAGGAG+AGG 0.663492 6_2:+62711767 Msa0922980:CDS
CATACCAAGAAATTGCTGGA+AGG 0.669178 6_2:+62714199 Msa0922980:CDS
GAACTAGCTGCAAAACAAAG+TGG 0.672283 6_2:+62717075 Msa0922980:CDS
CTAGGATTGCCAGACACTGG+AGG 0.672637 6_2:+62712456 Msa0922980:CDS
ATACATCCTAAGTTGTACAC+AGG 0.691450 6_2:+62710840 Msa0922980:CDS
TGAAAGTGCCATATGAGGTG+TGG 0.718654 6_2:-62711646 None:intergenic
CAAACTGATAGATATCGCAA+CGG 0.722489 6_2:+62715208 Msa0922980:CDS
AAGCAGAAGCTACTTCCAAG+GGG 0.733208 6_2:+62716308 Msa0922980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATCATTATTATAGT+AGG + chr6_2:62710243-62710262 Msa0922980:intron 10.0%
!! TTTATTATTTATTTACAGAT+TGG - chr6_2:62710366-62710385 None:intergenic 10.0%
!! TAATGAAAAAAAAATAGTAA+GGG - chr6_2:62711544-62711563 None:intergenic 10.0%
!! ATAATGAAAAAAAAATAGTA+AGG - chr6_2:62711545-62711564 None:intergenic 10.0%
!!! TTGAATAAATTTTTCTTTAT+TGG + chr6_2:62712989-62713008 Msa0922980:intron 10.0%
!!! TGAATAAATTTTTCTTTATT+GGG + chr6_2:62712990-62713009 Msa0922980:intron 10.0%
!!! ATAATTTGTAAAAGAAAATT+TGG - chr6_2:62713164-62713183 None:intergenic 10.0%
!! TATTATATTAACTGTTATAT+CGG - chr6_2:62714675-62714694 None:intergenic 10.0%
!!! ACATATTTTAGTTTTAATAA+TGG - chr6_2:62714732-62714751 None:intergenic 10.0%
!! TATTAAAACTAAAATATGTT+TGG + chr6_2:62714733-62714752 Msa0922980:intron 10.0%
!!! TTATTTTTAATAGTTTTCAT+CGG + chr6_2:62715885-62715904 Msa0922980:intron 10.0%
!! AAAAAAAAAAAAAAGAATAC+CGG - chr6_2:62716074-62716093 None:intergenic 10.0%
!!! TATTCTTTTTTTTTTTTTTG+AGG + chr6_2:62716075-62716094 Msa0922980:intron 10.0%
!!! ATTCTTTTTTTTTTTTTTGA+GGG + chr6_2:62716076-62716095 Msa0922980:intron 10.0%
!! TTCAATTCTTATTATATTTA+AGG - chr6_2:62716191-62716210 None:intergenic 10.0%
!! AATCATAATATAATATTTAG+GGG - chr6_2:62716553-62716572 None:intergenic 10.0%
!! CAATCATAATATAATATTTA+GGG - chr6_2:62716554-62716573 None:intergenic 10.0%
!! ACAATCATAATATAATATTT+AGG - chr6_2:62716555-62716574 None:intergenic 10.0%
!! ATTACACTTATTAATTATCA+AGG + chr6_2:62710196-62710215 Msa0922980:intron 15.0%
!! TAACAAACAATATTATATGA+AGG + chr6_2:62710606-62710625 Msa0922980:intron 15.0%
!!! ATAAAATTTTCAAAACTGTA+CGG + chr6_2:62711245-62711264 Msa0922980:intron 15.0%
!! GATAAATTAATATGGTATTT+AGG - chr6_2:62712509-62712528 None:intergenic 15.0%
!! AGTAGTTAGATAAATTAATA+TGG - chr6_2:62712517-62712536 None:intergenic 15.0%
!!! AATTTTAGTTATATTGAAGA+GGG - chr6_2:62712906-62712925 None:intergenic 15.0%
!!! AAATTTTAGTTATATTGAAG+AGG - chr6_2:62712907-62712926 None:intergenic 15.0%
!! ACTAAAATTTGTCAAAATTA+TGG + chr6_2:62712917-62712936 Msa0922980:intron 15.0%
!!! TATGCATTTTTATTATAAAC+AGG + chr6_2:62713576-62713595 Msa0922980:intron 15.0%
!! AATTCTTATATACTATCTTA+TGG + chr6_2:62714257-62714276 Msa0922980:intron 15.0%
!! TTAATGTAATATTATCATGA+AGG + chr6_2:62714280-62714299 Msa0922980:intron 15.0%
!! TTTGAAAATGACAAATAAAT+CGG + chr6_2:62715584-62715603 Msa0922980:intron 15.0%
!!! TGTTTTATAATCTTCAATTT+AGG + chr6_2:62715844-62715863 Msa0922980:CDS 15.0%
!!! TTTTGCAATATATAACAAAT+AGG + chr6_2:62716165-62716184 Msa0922980:intron 15.0%
!! TAATAAGAATTGAAAAGTTA+TGG + chr6_2:62716197-62716216 Msa0922980:intron 15.0%
!! AATAAGAATTGAAAAGTTAT+GGG + chr6_2:62716198-62716217 Msa0922980:intron 15.0%
!! TAAAACCAAATATTCATTTA+GGG - chr6_2:62716482-62716501 None:intergenic 15.0%
!! TTAAAACCAAATATTCATTT+AGG - chr6_2:62716483-62716502 None:intergenic 15.0%
!! AACAAATAATATGAGACAAA+GGG - chr6_2:62710139-62710158 None:intergenic 20.0%
!!! CTCATATTATTTGTTGTTTA+AGG + chr6_2:62710144-62710163 Msa0922980:intron 20.0%
!!! ATTATTTGTTGTTTAAGGTT+AGG + chr6_2:62710149-62710168 Msa0922980:intron 20.0%
!! TAAATGTATAGAATGAAAGT+TGG + chr6_2:62710408-62710427 Msa0922980:intron 20.0%
!!! GTATTGATCACATTTTTAAT+AGG - chr6_2:62710534-62710553 None:intergenic 20.0%
!!! GTTGTTTTTTGTGTTAATTT+TGG + chr6_2:62710657-62710676 Msa0922980:intron 20.0%
!!! ATTAAGCATACAATTTTCTT+TGG + chr6_2:62711044-62711063 Msa0922980:intron 20.0%
!!! AATTTGTTTTGTAAATCTGA+GGG - chr6_2:62711120-62711139 None:intergenic 20.0%
!!! TAATTTGTTTTGTAAATCTG+AGG - chr6_2:62711121-62711140 None:intergenic 20.0%
!!! TTTTAGTCCTTCAAATTATA+AGG - chr6_2:62711359-62711378 None:intergenic 20.0%
!! ATTTATTTGACTCTTTGATA+AGG + chr6_2:62711409-62711428 Msa0922980:intron 20.0%
!! CTTAATAAGTAATTAAGCAA+TGG - chr6_2:62711750-62711769 None:intergenic 20.0%
!! TTAATTGTATATTGACACTT+CGG - chr6_2:62712201-62712220 None:intergenic 20.0%
!!! AAAAGTGATTCCATTTTAAT+TGG - chr6_2:62712366-62712385 None:intergenic 20.0%
!!! ATTGTTATTTTCTCTATTCA+TGG + chr6_2:62712411-62712430 Msa0922980:CDS 20.0%
!! AATATCAAATATGGAATAGA+GGG - chr6_2:62713519-62713538 None:intergenic 20.0%
!! TAATATCAAATATGGAATAG+AGG - chr6_2:62713520-62713539 None:intergenic 20.0%
!! AAAAATGCATAATTAGAAAG+AGG - chr6_2:62713567-62713586 None:intergenic 20.0%
!! ATTATTGGAAATTATACTGA+TGG + chr6_2:62713646-62713665 Msa0922980:CDS 20.0%
!! ATTATATAAGCACTTAATCA+AGG - chr6_2:62713735-62713754 None:intergenic 20.0%
!! ATAAAATAGTTGAAGGATTA+AGG + chr6_2:62714623-62714642 Msa0922980:intron 20.0%
!! TTTGGACTATAAACATATTA+TGG + chr6_2:62714751-62714770 Msa0922980:intron 20.0%
!! ATAATGTTTAAGAAAGCAAA+GGG - chr6_2:62714780-62714799 None:intergenic 20.0%
!! AATAATGTTTAAGAAAGCAA+AGG - chr6_2:62714781-62714800 None:intergenic 20.0%
!! TTTATGGTTATGGATATTAT+CGG + chr6_2:62715534-62715553 Msa0922980:intron 20.0%
!! TAGTTTAACAAACATTCATA+TGG + chr6_2:62715672-62715691 Msa0922980:intron 20.0%
!!! AAATCTCTAAAAACTAATCT+CGG + chr6_2:62716118-62716137 Msa0922980:intron 20.0%
!!! ATATTATGATTGTGCATTTT+CGG + chr6_2:62716562-62716581 Msa0922980:intron 20.0%
!! ACAATAAAGTTGAAATAAGA+AGG - chr6_2:62717271-62717290 None:intergenic 20.0%
! TATTGAAATTGTTCCTCAAA+TGG + chr6_2:62710005-62710024 Msa0922980:exon 25.0%
! CAACAAATAATATGAGACAA+AGG - chr6_2:62710140-62710159 None:intergenic 25.0%
! TCATTATTATAGTAGGAGTA+AGG + chr6_2:62710250-62710269 Msa0922980:intron 25.0%
! GAGTAAGGACTAATTATTAT+AGG + chr6_2:62710265-62710284 Msa0922980:intron 25.0%
!!! ATTTTAGTTACATTGTAGTC+TGG - chr6_2:62710483-62710502 None:intergenic 25.0%
! TCATACCTTAATGTTAAAGA+AGG - chr6_2:62710695-62710714 None:intergenic 25.0%
! AGGTATGAAAAATATGAAAC+AGG + chr6_2:62710707-62710726 Msa0922980:intron 25.0%
! ATGAAAAATATGAAACAGGT+TGG + chr6_2:62710711-62710730 Msa0922980:intron 25.0%
!! TTGTATTTCAAGTATTCTGA+AGG - chr6_2:62710973-62710992 None:intergenic 25.0%
! TTCAGAATACTTGAAATACA+AGG + chr6_2:62710972-62710991 Msa0922980:CDS 25.0%
! ATACTTGAAATACAAGGAAA+TGG + chr6_2:62710978-62710997 Msa0922980:CDS 25.0%
!!! AGATATTTTGATATTGACGT+AGG - chr6_2:62711146-62711165 None:intergenic 25.0%
! ATTGATTGACGTTCAAATTA+AGG + chr6_2:62711290-62711309 Msa0922980:intron 25.0%
! TTGATTGACGTTCAAATTAA+GGG + chr6_2:62711291-62711310 Msa0922980:intron 25.0%
! TTATTAAGCCTTAATCATCA+AGG + chr6_2:62711762-62711781 Msa0922980:CDS 25.0%
!! TATACCTGTTTTCAAAATTC+TGG - chr6_2:62712011-62712030 None:intergenic 25.0%
! ATAACAATGTTGAACATGTT+TGG - chr6_2:62712399-62712418 None:intergenic 25.0%
!! TTCTCTATTCATGGATATTT+TGG + chr6_2:62712420-62712439 Msa0922980:CDS 25.0%
!! ATCATTATTGGAATTTTGGA+CGG - chr6_2:62712609-62712628 None:intergenic 25.0%
! TGTATACTAGTACTTGAAAA+CGG - chr6_2:62712873-62712892 None:intergenic 25.0%
!! TTTCAAGTACTAGTATACAA+TGG + chr6_2:62712874-62712893 Msa0922980:intron 25.0%
! TGTGTAACACTATATAACAT+TGG + chr6_2:62712954-62712973 Msa0922980:intron 25.0%
! ACATTAGCGCAATAAAAAAA+CGG - chr6_2:62713280-62713299 None:intergenic 25.0%
! TGAGCAAATCTTTCTAAATA+AGG - chr6_2:62713466-62713485 None:intergenic 25.0%
!! TTATTTAGAAAGATTTGCTC+AGG + chr6_2:62713465-62713484 Msa0922980:CDS 25.0%
!! CTTGGTAGTAATATCAAATA+TGG - chr6_2:62713528-62713547 None:intergenic 25.0%
! CAGTATAATTTCCAATAATG+AGG - chr6_2:62713645-62713664 None:intergenic 25.0%
! AAATTATACTGATGGAAACT+TGG + chr6_2:62713654-62713673 Msa0922980:CDS 25.0%
! GTTAGTAGATAAACTCAAAT+AGG + chr6_2:62713936-62713955 Msa0922980:intron 25.0%
!!! AAAAGTACTAATAGAGTAGT+CGG - chr6_2:62714003-62714022 None:intergenic 25.0%
! ACTAGTTATGATAAAATCAG+CGG - chr6_2:62714178-62714197 None:intergenic 25.0%
! ACTATAAAGTAGTTCTTCAA+TGG - chr6_2:62714515-62714534 None:intergenic 25.0%
! TGAAGAACTACTTTATAGTA+AGG + chr6_2:62714516-62714535 Msa0922980:CDS 25.0%
! TAACTTGATAAGAAAGTAAG+AGG - chr6_2:62714572-62714591 None:intergenic 25.0%
! TAAGGTTTATATTCTAGTGT+AGG + chr6_2:62714641-62714660 Msa0922980:intron 25.0%
! TTGGTAAATCTTGTAATTGT+TGG + chr6_2:62715070-62715089 Msa0922980:CDS 25.0%
! TTTCATATTGATCCTCATAA+TGG + chr6_2:62715394-62715413 Msa0922980:CDS 25.0%
! AATGGTACATTTCTGATTTA+TGG + chr6_2:62715518-62715537 Msa0922980:intron 25.0%
! ACATTTCTGATTTATGGTTA+TGG + chr6_2:62715524-62715543 Msa0922980:intron 25.0%
! TTAACAAACATTCATATGGT+TGG + chr6_2:62715676-62715695 Msa0922980:intron 25.0%
! TTGAATATGGGATCAATTTA+TGG + chr6_2:62715765-62715784 Msa0922980:CDS 25.0%
! TGAATATGGGATCAATTTAT+GGG + chr6_2:62715766-62715785 Msa0922980:CDS 25.0%
! TAATCTTCAATTTAGGAACT+TGG + chr6_2:62715851-62715870 Msa0922980:CDS 25.0%
! TTTAGAGATTTCAAGAATAC+CGG - chr6_2:62716109-62716128 None:intergenic 25.0%
!!! GTTAGCTTAGATTCAATTTT+GGG - chr6_2:62716391-62716410 None:intergenic 25.0%
!!! TGTTAGCTTAGATTCAATTT+TGG - chr6_2:62716392-62716411 None:intergenic 25.0%
!!! GTTTTTTAGTTTGACTAATG+AGG - chr6_2:62716446-62716465 None:intergenic 25.0%
! AGTTACCCTAAATGAATATT+TGG + chr6_2:62716474-62716493 Msa0922980:intron 25.0%
! ACGTTAAAAATTGGAATGTT+CGG - chr6_2:62716657-62716676 None:intergenic 25.0%
!!! AGTCTCAAAGTTTTAATTGT+GGG - chr6_2:62716892-62716911 None:intergenic 25.0%
!!! CCATGTTAATTTTTTTGTCA+TGG - chr6_2:62716950-62716969 None:intergenic 25.0%
! CCATGACAAAAAAATTAACA+TGG + chr6_2:62716947-62716966 Msa0922980:intron 25.0%
! TCATTATCTCTCTAAGTATT+TGG + chr6_2:62717155-62717174 Msa0922980:CDS 25.0%
! TCATTTCAACATTGTACATT+TGG + chr6_2:62717318-62717337 Msa0922980:three_prime_UTR 25.0%
!! GTACATTTGGAATTAATTAG+TGG + chr6_2:62717331-62717350 Msa0922980:three_prime_UTR 25.0%
AGCATTTCTTCATATGGAAA+CGG - chr6_2:62710104-62710123 None:intergenic 30.0%
AATTGAATCAGATACTGAAC+CGG + chr6_2:62710311-62710330 Msa0922980:intron 30.0%
CTAAAATCACACAAATTGAC+CGG + chr6_2:62710496-62710515 Msa0922980:intron 30.0%
CACTTCCTTCTTTAACATTA+AGG + chr6_2:62710687-62710706 Msa0922980:intron 30.0%
AGTGAGACTAAATCACATAA+TGG + chr6_2:62710753-62710772 Msa0922980:CDS 30.0%
! AAATCACATAATGGAAGATG+TGG + chr6_2:62710762-62710781 Msa0922980:CDS 30.0%
!! CCTCTCATTTTTATCTTCAA+TGG - chr6_2:62710794-62710813 None:intergenic 30.0%
CCATTGAAGATAAAAATGAG+AGG + chr6_2:62710791-62710810 Msa0922980:CDS 30.0%
! AAATGAGAGGAAAAAGCTTT+TGG + chr6_2:62710804-62710823 Msa0922980:CDS 30.0%
CTAACAGCAAAAACAACATA+TGG - chr6_2:62710883-62710902 None:intergenic 30.0%
!!! CATATGTTGTTTTTGCTGTT+AGG + chr6_2:62710881-62710900 Msa0922980:CDS 30.0%
TAAAGTGAATGCAGATGATT+TGG + chr6_2:62710930-62710949 Msa0922980:CDS 30.0%
AAATGGTATTTGATGAGAAG+TGG + chr6_2:62710995-62711014 Msa0922980:CDS 30.0%
TCCTCGAAATTGTAAACATA+GGG + chr6_2:62711085-62711104 Msa0922980:intron 30.0%
GACTGATCCTTATAATTTGA+AGG + chr6_2:62711349-62711368 Msa0922980:intron 30.0%
! TTAACATGAGTTGAATTTGC+AGG + chr6_2:62711574-62711593 Msa0922980:intron 30.0%
! TAACATGAGTTGAATTTGCA+GGG + chr6_2:62711575-62711594 Msa0922980:intron 30.0%
!!! TGCTTTAGAGATAGATTTTG+AGG + chr6_2:62711611-62711630 Msa0922980:CDS 30.0%
CTTTCATCTTCTATTGGAAA+AGG + chr6_2:62711663-62711682 Msa0922980:CDS 30.0%
! AAGGACTTGATTTTACTACT+AGG + chr6_2:62711682-62711701 Msa0922980:CDS 30.0%
AGAGGTAATTAAAGCCATAA+GGG + chr6_2:62711785-62711804 Msa0922980:intron 30.0%
TTCAATACTTGATACCCTTA+TGG - chr6_2:62711802-62711821 None:intergenic 30.0%
! CTGTTTTCAAAATTCTGGTA+TGG - chr6_2:62712006-62712025 None:intergenic 30.0%
!! CATACCAGAATTTTGAAAAC+AGG + chr6_2:62712004-62712023 Msa0922980:CDS 30.0%
AATAAGGAAGGATTAAAACC+TGG - chr6_2:62712482-62712501 None:intergenic 30.0%
!! AGGTTTTAATCCTTCCTTAT+TGG + chr6_2:62712481-62712500 Msa0922980:intron 30.0%
TATTTAGGAACCAATAAGGA+AGG - chr6_2:62712494-62712513 None:intergenic 30.0%
ATGGTATTTAGGAACCAATA+AGG - chr6_2:62712498-62712517 None:intergenic 30.0%
ATCTAACTACTTCTCTCAAT+AGG + chr6_2:62712526-62712545 Msa0922980:intron 30.0%
! CTCTCAATAGGAACATTTTA+TGG + chr6_2:62712538-62712557 Msa0922980:intron 30.0%
GTCCAAAATTCCAATAATGA+TGG + chr6_2:62712608-62712627 Msa0922980:intron 30.0%
! GTCCATCATTATTGGAATTT+TGG - chr6_2:62712613-62712632 None:intergenic 30.0%
ATCCGATACATTGACATAAT+CGG + chr6_2:62712676-62712695 Msa0922980:intron 30.0%
!! AGCAAAGGCATTATATAGAA+AGG - chr6_2:62713210-62713229 None:intergenic 30.0%
!!! GAATGCTTAGTTTTGATGAT+AGG - chr6_2:62713370-62713389 None:intergenic 30.0%
GGAACTAAAATGCATAATCT+TGG - chr6_2:62713546-62713565 None:intergenic 30.0%
TACCAAGATTCTTGAACTTA+TGG + chr6_2:62713606-62713625 Msa0922980:CDS 30.0%
ATCCATAAGTTCAAGAATCT+TGG - chr6_2:62713611-62713630 None:intergenic 30.0%
AAGATTCTTGAACTTATGGA+TGG + chr6_2:62713610-62713629 Msa0922980:CDS 30.0%
TAATTTCCAATAATGAGGTC+AGG - chr6_2:62713640-62713659 None:intergenic 30.0%
AAACTTGGTTTCATCCTTAA+TGG + chr6_2:62713669-62713688 Msa0922980:CDS 30.0%
!! AGCTATTTTCAAAGCTATTC+TGG + chr6_2:62713826-62713845 Msa0922980:intron 30.0%
AAACTCAAATAGGTCAATCA+AGG + chr6_2:62713946-62713965 Msa0922980:intron 30.0%
GTCAATCAAGGAATATTCAT+CGG + chr6_2:62713958-62713977 Msa0922980:intron 30.0%
ATGAAGATTCAGATGCTAAA+TGG + chr6_2:62714088-62714107 Msa0922980:CDS 30.0%
!!! TGTTTTTTGTATCATCAGCA+AGG + chr6_2:62714315-62714334 Msa0922980:intron 30.0%
CGACGATATAAAATAGTTGA+AGG + chr6_2:62714616-62714635 Msa0922980:intron 30.0%
TCGTCGAATTAAAATGTGTT+TGG + chr6_2:62714927-62714946 Msa0922980:intron 30.0%
GAAACCTATAATCTTCTCAA+TGG + chr6_2:62714976-62714995 Msa0922980:CDS 30.0%
GACAAAGTGAAAAACATTAG+CGG + chr6_2:62715007-62715026 Msa0922980:CDS 30.0%
GTAAATCTTGTAATTGTTGG+AGG + chr6_2:62715073-62715092 Msa0922980:CDS 30.0%
ATGAAAGAATACAAACTGCA+AGG + chr6_2:62715163-62715182 Msa0922980:CDS 30.0%
! ATTGATTCATCTCCATTATG+AGG - chr6_2:62715409-62715428 None:intergenic 30.0%
GTCTTCAAAGAATCAATGAA+TGG + chr6_2:62715500-62715519 Msa0922980:CDS 30.0%
TACGAAAGTGACAGTTAAAA+AGG + chr6_2:62715625-62715644 Msa0922980:intron 30.0%
! GTTTTCTTTGTAGCTATACA+TGG + chr6_2:62715721-62715740 Msa0922980:intron 30.0%
!! TGCAAACAAAGTGTTGAATA+TGG + chr6_2:62715752-62715771 Msa0922980:CDS 30.0%
!! GCAAACAAAGTGTTGAATAT+GGG + chr6_2:62715753-62715772 Msa0922980:CDS 30.0%
GTTGAACAAAGAACAAAAGT+TGG + chr6_2:62715800-62715819 Msa0922980:CDS 30.0%
AATGAACACAAAATTGCTTC+CGG + chr6_2:62716052-62716071 Msa0922980:intron 30.0%
!!! TTTTTTTGAGGGATTTCTTC+CGG + chr6_2:62716087-62716106 Msa0922980:intron 30.0%
TTGAATCTAAGCTAACATCA+AGG + chr6_2:62716395-62716414 Msa0922980:CDS 30.0%
!!! CAGTCTCAAAGTTTTAATTG+TGG - chr6_2:62716893-62716912 None:intergenic 30.0%
AGTCGTTATAATTATGCCAT+AGG + chr6_2:62716922-62716941 Msa0922980:intron 30.0%
GTCGTTATAATTATGCCATA+GGG + chr6_2:62716923-62716942 Msa0922980:intron 30.0%
! ACTTTATGAATCTTTTGCAG+TGG + chr6_2:62717036-62717055 Msa0922980:intron 30.0%
ATCTTTATTCTGGATTACGT+TGG + chr6_2:62717100-62717119 Msa0922980:CDS 30.0%
ATGAACATAAAAGCAATTCC+TGG - chr6_2:62717132-62717151 None:intergenic 30.0%
! TGGCAAAGCATTTCTTCATA+TGG - chr6_2:62710110-62710129 None:intergenic 35.0%
ATATGAAGAAATGCTTTGCC+AGG + chr6_2:62710109-62710128 Msa0922980:CDS 35.0%
TATAGTTGAACCAGTTCAAC+CGG - chr6_2:62710444-62710463 None:intergenic 35.0%
GGTTCAACTATAGTTCAATC+AGG + chr6_2:62710452-62710471 Msa0922980:intron 35.0%
! TAATAGGTTGAATCGACAAC+CGG - chr6_2:62710518-62710537 None:intergenic 35.0%
ATACATCCTAAGTTGTACAC+AGG + chr6_2:62710840-62710859 Msa0922980:CDS 35.0%
ACAGCAAAAACAACATATGG+TGG - chr6_2:62710880-62710899 None:intergenic 35.0%
TTAACATATTCCCAGAAACC+TGG - chr6_2:62710913-62710932 None:intergenic 35.0%
GTCCTCGAAATTGTAAACAT+AGG + chr6_2:62711084-62711103 Msa0922980:intron 35.0%
TGACTCTTTGATAAGGCAAA+TGG + chr6_2:62711416-62711435 Msa0922980:intron 35.0%
TCCATGAAATGTTAGTTCCA+TGG + chr6_2:62711439-62711458 Msa0922980:intron 35.0%
CTCCAGAGAAATTTGAACTT+CGG - chr6_2:62711485-62711504 None:intergenic 35.0%
ATGGCACTTTCATCTTCTAT+TGG + chr6_2:62711657-62711676 Msa0922980:CDS 35.0%
! TTACCTCTCCTTGATGATTA+AGG - chr6_2:62711773-62711792 None:intergenic 35.0%
GAGAGGTAATTAAAGCCATA+AGG + chr6_2:62711784-62711803 Msa0922980:intron 35.0%
!! TTCAATGCTTTCTGAAGCTT+TGG - chr6_2:62711943-62711962 None:intergenic 35.0%
ATGAAACACTGACAATGACA+TGG + chr6_2:62712064-62712083 Msa0922980:intron 35.0%
!!! GATTTTTGTTTTCTGTGAGC+AGG + chr6_2:62712244-62712263 Msa0922980:intron 35.0%
TAGAGAATGGGGATTTGATA+AGG + chr6_2:62712269-62712288 Msa0922980:CDS 35.0%
AGAGAATGGGGATTTGATAA+GGG + chr6_2:62712270-62712289 Msa0922980:CDS 35.0%
AGCAGGAGATCCAATTAAAA+TGG + chr6_2:62712353-62712372 Msa0922980:CDS 35.0%
!! AAATGGAATCACTTTTCAGC+AGG + chr6_2:62712370-62712389 Msa0922980:CDS 35.0%
! CACCGATTATGTCAATGTAT+CGG - chr6_2:62712681-62712700 None:intergenic 35.0%
ACGGCTCAAAATACAAAACA+CGG - chr6_2:62712854-62712873 None:intergenic 35.0%
!! TTTTCTTTATTGGGACTAGC+AGG + chr6_2:62712999-62713018 Msa0922980:intron 35.0%
TCCTTAATGGCTTCTAAACT+TGG + chr6_2:62713682-62713701 Msa0922980:CDS 35.0%
ACCAAGTTTAGAAGCCATTA+AGG - chr6_2:62713686-62713705 None:intergenic 35.0%
!! TTCTAAACTTGGTGTAACTC+AGG + chr6_2:62713693-62713712 Msa0922980:CDS 35.0%
AAGCATTTGTGAGACTGTTT+GGG - chr6_2:62713914-62713933 None:intergenic 35.0%
TAAGCATTTGTGAGACTGTT+TGG - chr6_2:62713915-62713934 None:intergenic 35.0%
! CTTGTATCCATATTGACTGA+AGG + chr6_2:62714032-62714051 Msa0922980:intron 35.0%
AGTACATACCAAGAAATTGC+TGG + chr6_2:62714195-62714214 Msa0922980:CDS 35.0%
TTTGTATCATCAGCAAGGAT+AGG + chr6_2:62714320-62714339 Msa0922980:intron 35.0%
TAAAGTAGTTCTTCAATGGC+AGG - chr6_2:62714511-62714530 None:intergenic 35.0%
CTTGATAAGAAAGTAAGAGG+AGG - chr6_2:62714569-62714588 None:intergenic 35.0%
TCGTTACTATAATATGCGAG+TGG - chr6_2:62714599-62714618 None:intergenic 35.0%
CTTGCCATTGAGAAGATTAT+AGG - chr6_2:62714983-62715002 None:intergenic 35.0%
CTATAATCTTCTCAATGGCA+AGG + chr6_2:62714981-62715000 Msa0922980:CDS 35.0%
! TCTCTGTCTTTCGATTTTGA+TGG - chr6_2:62715109-62715128 None:intergenic 35.0%
ATCGAAAGACAGAGAAGAAA+CGG + chr6_2:62715114-62715133 Msa0922980:CDS 35.0%
CAAACTGATAGATATCGCAA+CGG + chr6_2:62715208-62715227 Msa0922980:CDS 35.0%
! TTTTGGTCTAACAGTCATTG+AGG + chr6_2:62715294-62715313 Msa0922980:CDS 35.0%
!! CCTTGATTTGTTGCAAAAGT+TGG - chr6_2:62715337-62715356 None:intergenic 35.0%
! CCAACTTTTGCAACAAATCA+AGG + chr6_2:62715334-62715353 Msa0922980:CDS 35.0%
! ACTTTTGCAACAAATCAAGG+CGG + chr6_2:62715337-62715356 Msa0922980:CDS 35.0%
! TGGAACATAATGTCTAAAGC+TGG + chr6_2:62715478-62715497 Msa0922980:CDS 35.0%
TGACAGTTAAAAAGGAACAG+AGG + chr6_2:62715633-62715652 Msa0922980:intron 35.0%
GACAGTTAAAAAGGAACAGA+GGG + chr6_2:62715634-62715653 Msa0922980:intron 35.0%
! TGGGATCAATTTATGGGTTT+TGG + chr6_2:62715772-62715791 Msa0922980:CDS 35.0%
CAAAGAACAAAAGTTGGCAA+AGG + chr6_2:62715806-62715825 Msa0922980:CDS 35.0%
GGAAAATTTCATTGCTTTGC+AGG + chr6_2:62716219-62716238 Msa0922980:intron 35.0%
!! AAGAAAGGTACCAATTCCTA+AGG + chr6_2:62716243-62716262 Msa0922980:CDS 35.0%
! AGCTTAGATTCAATTTTGGG+TGG - chr6_2:62716388-62716407 None:intergenic 35.0%
AGGCTAGTGACGTTAAAAAT+TGG - chr6_2:62716666-62716685 None:intergenic 35.0%
!!! TTTTTTTGTCATGGTCCCTA+TGG - chr6_2:62716941-62716960 None:intergenic 35.0%
CAAAGTGGTGATCTTTATTC+TGG + chr6_2:62717090-62717109 Msa0922980:CDS 35.0%
CTTGAAGTAGAAGCCATTTG+AGG - chr6_2:62710021-62710040 None:intergenic 40.0%
!! ATGGAAACGGCTTTGTTTCA+AGG - chr6_2:62710091-62710110 None:intergenic 40.0%
ATAGTTGAACCAGTTCAACC+GGG - chr6_2:62710443-62710462 None:intergenic 40.0%
!! TGAAACAGGTTGGTTGCAAA+TGG + chr6_2:62710721-62710740 Msa0922980:intron 40.0%
!! GAAACAGGTTGGTTGCAAAT+GGG + chr6_2:62710722-62710741 Msa0922980:intron 40.0%
! TGAGAGGAAAAAGCTTTTGG+AGG + chr6_2:62710807-62710826 Msa0922980:CDS 40.0%
! GAGAGGAAAAAGCTTTTGGA+GGG + chr6_2:62710808-62710827 Msa0922980:CDS 40.0%
!! AAGCTTTTGGAGGGCTTATT+CGG + chr6_2:62710817-62710836 Msa0922980:CDS 40.0%
TATTCCCAGAAACCTGGATT+AGG - chr6_2:62710907-62710926 None:intergenic 40.0%
! GCAGATGATTTGGAAGTAGA+TGG + chr6_2:62710940-62710959 Msa0922980:CDS 40.0%
GCCCTATGTTTACAATTTCG+AGG - chr6_2:62711089-62711108 None:intergenic 40.0%
GCCATGGAACTAACATTTCA+TGG - chr6_2:62711443-62711462 None:intergenic 40.0%
AATTTGAACTTCGGCCCTTA+CGG - chr6_2:62711476-62711495 None:intergenic 40.0%
TGATTTCACCACACCTCATA+TGG + chr6_2:62711638-62711657 Msa0922980:CDS 40.0%
!! GAAGATGAAAGTGCCATATG+AGG - chr6_2:62711654-62711673 None:intergenic 40.0%
AAGCCTTAATCATCAAGGAG+AGG + chr6_2:62711767-62711786 Msa0922980:CDS 40.0%
TGTGAGCAGGTTTAGAGAAT+GGG + chr6_2:62712257-62712276 Msa0922980:intron 40.0%
GACAATGAGAATGCTTTCTG+AGG + chr6_2:62712323-62712342 Msa0922980:CDS 40.0%
! TTTCAAATACTGGTCTACGG+TGG - chr6_2:62712585-62712604 None:intergenic 40.0%
! GGCTTTCAAATACTGGTCTA+CGG - chr6_2:62712588-62712607 None:intergenic 40.0%
TTTGGACGGCTTTCAAATAC+TGG - chr6_2:62712595-62712614 None:intergenic 40.0%
GAAACGTCGTCCATCATTAT+TGG - chr6_2:62712621-62712640 None:intergenic 40.0%
ATGTATCGGATGTTGCAACA+AGG - chr6_2:62712667-62712686 None:intergenic 40.0%
!! TGACATAATCGGTGTCAGTT+TGG + chr6_2:62712687-62712706 Msa0922980:intron 40.0%
!! GACTGAGACTTTGACTTGAT+TGG - chr6_2:62712791-62712810 None:intergenic 40.0%
! GGACTGTGAACTTCTACTTT+TGG + chr6_2:62712824-62712843 Msa0922980:intron 40.0%
! CTCCAAAAGATTGAGTTGCA+AGG + chr6_2:62713066-62713085 Msa0922980:CDS 40.0%
! GAATCTGAGGCTTCACATTA+AGG - chr6_2:62713092-62713111 None:intergenic 40.0%
TAGCATACCACAAGAATCTG+AGG - chr6_2:62713105-62713124 None:intergenic 40.0%
CCTTTGCTCATATGTTTCAC+CGG + chr6_2:62713222-62713241 Msa0922980:intron 40.0%
! GTAAGTTTTCATCTGCATGC+CGG - chr6_2:62713244-62713263 None:intergenic 40.0%
GTCTGATACCGAATGCAAAA+GGG + chr6_2:62713320-62713339 Msa0922980:CDS 40.0%
! CATGTTGTCCCTTTTGCATT+CGG - chr6_2:62713331-62713350 None:intergenic 40.0%
ACATTCTTAGAGTCCCTTTC+TGG + chr6_2:62713392-62713411 Msa0922980:CDS 40.0%
AGAAGGGAATTCTATCCCAA+TGG + chr6_2:62713419-62713438 Msa0922980:CDS 40.0%
GAAGGGAATTCTATCCCAAT+GGG + chr6_2:62713420-62713439 Msa0922980:CDS 40.0%
GGAAAACCTGACCTCATTAT+TGG + chr6_2:62713631-62713650 Msa0922980:CDS 40.0%
!! GTGTAACTCAGGTTAGCTTA+TGG + chr6_2:62713704-62713723 Msa0922980:intron 40.0%
AGACTGTTTGGGAGAGTTTA+TGG - chr6_2:62713903-62713922 None:intergenic 40.0%
ATGGTTGCCTTCAGTCAATA+TGG - chr6_2:62714042-62714061 None:intergenic 40.0%
CATACCAAGAAATTGCTGGA+AGG + chr6_2:62714199-62714218 Msa0922980:CDS 40.0%
TCAACCTTCCAGCAATTTCT+TGG - chr6_2:62714206-62714225 None:intergenic 40.0%
TTTGCTTCTTCTCGGTGAAA+GGG - chr6_2:62714471-62714490 None:intergenic 40.0%
GGTCAATCTTTGCTTCTTCT+CGG - chr6_2:62714479-62714498 None:intergenic 40.0%
! TTCAATGGCAGGTTGAAAAG+CGG - chr6_2:62714500-62714519 None:intergenic 40.0%
GAACAAGAGACTAAGAAGCT+TGG + chr6_2:62715051-62715070 Msa0922980:CDS 40.0%
! CTTTTGTGTCTGCGATACAT+CGG - chr6_2:62715243-62715262 None:intergenic 40.0%
CCATCAACAATGATTTCAGC+TGG - chr6_2:62715364-62715383 None:intergenic 40.0%
CCAGCTGAAATCATTGTTGA+TGG + chr6_2:62715361-62715380 Msa0922980:CDS 40.0%
!! ATCATTGTTGATGGTGTCTC+AGG + chr6_2:62715370-62715389 Msa0922980:CDS 40.0%
GACATTATGTTCCAGTGTTC+AGG - chr6_2:62715472-62715491 None:intergenic 40.0%
!! TCTGTTTTGAGTCGTTTCTC+TGG + chr6_2:62715974-62715993 Msa0922980:intron 40.0%
! TGACATTGGTTGTGGTTCTT+GGG - chr6_2:62716272-62716291 None:intergenic 40.0%
! TTGACATTGGTTGTGGTTCT+TGG - chr6_2:62716273-62716292 None:intergenic 40.0%
!!! GGAAGTAGCTTCTGCTTTTT+TGG - chr6_2:62716305-62716324 None:intergenic 40.0%
AAAAGCAGAAGCTACTTCCA+AGG + chr6_2:62716306-62716325 Msa0922980:CDS 40.0%
AAAGCAGAAGCTACTTCCAA+GGG + chr6_2:62716307-62716326 Msa0922980:CDS 40.0%
! ATTGTGCATTTTCGGACTCA+AGG + chr6_2:62716570-62716589 Msa0922980:intron 40.0%
AAGATCCATGTGTGTCATGT+AGG + chr6_2:62716786-62716805 Msa0922980:intron 40.0%
AATAGCCTACATGACACACA+TGG - chr6_2:62716794-62716813 None:intergenic 40.0%
CAGTGGTGAATCTTCAAGTA+AGG + chr6_2:62717053-62717072 Msa0922980:intron 40.0%
GAACTAGCTGCAAAACAAAG+TGG + chr6_2:62717075-62717094 Msa0922980:CDS 40.0%
!! TATGAGACAAAGGGAGTACC+TGG - chr6_2:62710130-62710149 None:intergenic 45.0%
! GGTTGGTTGCAAATGGGAAA+AGG + chr6_2:62710728-62710747 Msa0922980:intron 45.0%
CATCCTAAGTTGTACACAGG+AGG + chr6_2:62710843-62710862 Msa0922980:CDS 45.0%
!! TTTGCTGTTAGGCCTAATCC+AGG + chr6_2:62710892-62710911 Msa0922980:CDS 45.0%
TTAGGCCTAATCCAGGTTTC+TGG + chr6_2:62710899-62710918 Msa0922980:CDS 45.0%
TAGGCCTAATCCAGGTTTCT+GGG + chr6_2:62710900-62710919 Msa0922980:CDS 45.0%
GGCCGAAGTTCAAATTTCTC+TGG + chr6_2:62711480-62711499 Msa0922980:intron 45.0%
!! TGAAAGTGCCATATGAGGTG+TGG - chr6_2:62711649-62711668 None:intergenic 45.0%
CTACTAGGATCTTGACCTCA+AGG + chr6_2:62711697-62711716 Msa0922980:CDS 45.0%
TGAACTCTCACTCAACCTTG+AGG - chr6_2:62711715-62711734 None:intergenic 45.0%
TGGTGTGTCTTTGTGATGTG+CGG - chr6_2:62711986-62712005 None:intergenic 45.0%
GATCATTGTCAGTGTCAACG+TGG - chr6_2:62712108-62712127 None:intergenic 45.0%
TGACACGACACGGAAACATT+TGG - chr6_2:62712157-62712176 None:intergenic 45.0%
CTGTGAGCAGGTTTAGAGAA+TGG + chr6_2:62712256-62712275 Msa0922980:intron 45.0%
GTGAGCAGGTTTAGAGAATG+GGG + chr6_2:62712258-62712277 Msa0922980:intron 45.0%
AATGGGGATTTGATAAGGGC+TGG + chr6_2:62712274-62712293 Msa0922980:CDS 45.0%
ATGGGGATTTGATAAGGGCT+GGG + chr6_2:62712275-62712294 Msa0922980:CDS 45.0%
!! CTTTCTGAGGTACTAGAAGC+AGG + chr6_2:62712336-62712355 Msa0922980:CDS 45.0%
TTTGGCCAAGCAGATGTTCT+AGG + chr6_2:62712438-62712457 Msa0922980:CDS 45.0%
GCAATCCTAGAACATCTGCT+TGG - chr6_2:62712446-62712465 None:intergenic 45.0%
ATCGGATGTTGCAACAAGGA+GGG - chr6_2:62712663-62712682 None:intergenic 45.0%
TATCGGATGTTGCAACAAGG+AGG - chr6_2:62712664-62712683 None:intergenic 45.0%
AAGTCAAAGTCTCAGTCGTG+AGG + chr6_2:62712794-62712813 Msa0922980:intron 45.0%
! TCTTTATTGGGACTAGCAGG+TGG + chr6_2:62713002-62713021 Msa0922980:intron 45.0%
! GGCCTTGCAACTCAATCTTT+TGG - chr6_2:62713071-62713090 None:intergenic 45.0%
TGTGAAGCCTCAGATTCTTG+TGG + chr6_2:62713095-62713114 Msa0922980:CDS 45.0%
CCGGTGAAACATATGAGCAA+AGG - chr6_2:62713225-62713244 None:intergenic 45.0%
CGTCTGATACCGAATGCAAA+AGG + chr6_2:62713319-62713338 Msa0922980:CDS 45.0%
TTCCCTTCTCTGTCCAGAAA+GGG - chr6_2:62713408-62713427 None:intergenic 45.0%
ATTCCCTTCTCTGTCCAGAA+AGG - chr6_2:62713409-62713428 None:intergenic 45.0%
CTTCTCCAAAGCATGAGCAA+TGG - chr6_2:62714061-62714080 None:intergenic 45.0%
TCACACTGCATTTACCATGC+CGG + chr6_2:62714360-62714379 Msa0922980:CDS 45.0%
GGAGCAGCAATGTTGAACTT+TGG - chr6_2:62714424-62714443 None:intergenic 45.0%
AAGTTCAACATTGCTGCTCC+AGG + chr6_2:62714424-62714443 Msa0922980:CDS 45.0%
TAGACAGATTGATCAGCTCC+TGG - chr6_2:62714445-62714464 None:intergenic 45.0%
CTTTGCTTCTTCTCGGTGAA+AGG - chr6_2:62714472-62714491 None:intergenic 45.0%
AACTGCAAGGTCAGTTCAGA+TGG + chr6_2:62715176-62715195 Msa0922980:CDS 45.0%
!! AGGTCAGTTCAGATGGATTG+CGG + chr6_2:62715183-62715202 Msa0922980:CDS 45.0%
CGATGTATCGCAGACACAAA+AGG + chr6_2:62715241-62715260 Msa0922980:CDS 45.0%
CCAAAAGCTTCATACAGTGC+TGG - chr6_2:62715280-62715299 None:intergenic 45.0%
! CCAGCACTGTATGAAGCTTT+TGG + chr6_2:62715277-62715296 Msa0922980:CDS 45.0%
GTCATTGAGGCAATGAACTG+TGG + chr6_2:62715307-62715326 Msa0922980:CDS 45.0%
GCAAGACTAATCCTGAACAC+TGG + chr6_2:62715458-62715477 Msa0922980:CDS 45.0%
CATTGCTTTGCAGGCAAGAA+AGG + chr6_2:62716228-62716247 Msa0922980:intron 45.0%
! TCTTGGGGTACCTTAGGAAT+TGG - chr6_2:62716256-62716275 None:intergenic 45.0%
! GACATTGGTTGTGGTTCTTG+GGG - chr6_2:62716271-62716290 None:intergenic 45.0%
! GGAGTTGTTGACATTGGTTG+TGG - chr6_2:62716280-62716299 None:intergenic 45.0%
TTGGCAGGAGTTGTTGACAT+TGG - chr6_2:62716286-62716305 None:intergenic 45.0%
!!! GTAGCTTCTGCTTTTTTGGC+AGG - chr6_2:62716301-62716320 None:intergenic 45.0%
AAGCAGAAGCTACTTCCAAG+GGG + chr6_2:62716308-62716327 Msa0922980:CDS 45.0%
! TGAAGTACCTCAAACCCAGT+TGG + chr6_2:62716354-62716373 Msa0922980:CDS 45.0%
! ACTAGCCTAAACGTCCAATG+TGG + chr6_2:62716678-62716697 Msa0922980:intron 45.0%
AACGACCTAGTTAGTGATCG+AGG + chr6_2:62716827-62716846 Msa0922980:intron 45.0%
ACGACCTAGTTAGTGATCGA+GGG + chr6_2:62716828-62716847 Msa0922980:intron 45.0%
ATGTCCCTCGATCACTAACT+AGG - chr6_2:62716835-62716854 None:intergenic 45.0%
GGGACATGATTGTCACAAGA+TGG + chr6_2:62716848-62716867 Msa0922980:intron 45.0%
!!! TTTTTTTTCATTATAAAAAA+TGG + chr6_2:62711551-62711570 Msa0922980:intron 5.0%
!! CGGCTTTGTTTCAAGGCATC+AGG - chr6_2:62710084-62710103 None:intergenic 50.0%
! TACTGAACCGGCGAGACTTT+TGG + chr6_2:62710323-62710342 Msa0922980:intron 50.0%
! ACTGAACCGGCGAGACTTTT+GGG + chr6_2:62710324-62710343 Msa0922980:intron 50.0%
CTATGACCCAAAAGTCTCGC+CGG - chr6_2:62710333-62710352 None:intergenic 50.0%
! GAAAGTTGGTTGAACCGACC+CGG + chr6_2:62710422-62710441 Msa0922980:intron 50.0%
TTGAACCAGTTCAACCGGGT+CGG - chr6_2:62710439-62710458 None:intergenic 50.0%
CTGCCTCCTGTGTACAACTT+AGG - chr6_2:62710849-62710868 None:intergenic 50.0%
TTCCGTGTCGTGTCAGTGTA+CGG + chr6_2:62712162-62712181 Msa0922980:intron 50.0%
TGGGGATTTGATAAGGGCTG+GGG + chr6_2:62712276-62712295 Msa0922980:CDS 50.0%
!! GTTCTAGGATTGCCAGACAC+TGG + chr6_2:62712453-62712472 Msa0922980:CDS 50.0%
TCTCAGTCGTGAGGACAAAG+AGG + chr6_2:62712803-62712822 Msa0922980:intron 50.0%
CGCTAATGTGTTGCATGCAC+AGG + chr6_2:62713291-62713310 Msa0922980:intron 50.0%
AGTCCCTTTCTGGACAGAGA+AGG + chr6_2:62713402-62713421 Msa0922980:CDS 50.0%
GTCCCTTTCTGGACAGAGAA+GGG + chr6_2:62713403-62713422 Msa0922980:CDS 50.0%
ATCGAATCGCGACACCCATT+GGG - chr6_2:62713437-62713456 None:intergenic 50.0%
TATCGAATCGCGACACCCAT+TGG - chr6_2:62713438-62713457 None:intergenic 50.0%
GGCAACCATTGCTCATGCTT+TGG + chr6_2:62714053-62714072 Msa0922980:intron 50.0%
ATCATCAGCAAGGATAGGCC+AGG + chr6_2:62714325-62714344 Msa0922980:intron 50.0%
TCATCAGCAAGGATAGGCCA+GGG + chr6_2:62714326-62714345 Msa0922980:intron 50.0%
GTGTGAGTTTCATACTGCCC+TGG - chr6_2:62714346-62714365 None:intergenic 50.0%
CACACTGCATTTACCATGCC+GGG + chr6_2:62714361-62714380 Msa0922980:CDS 50.0%
! TGTGGTTCTTGGGGTACCTT+AGG - chr6_2:62716262-62716281 None:intergenic 50.0%
AATGCTGCCAACTGGGTTTG+AGG - chr6_2:62716364-62716383 None:intergenic 50.0%
GTTCGCCACATTGGACGTTT+AGG - chr6_2:62716686-62716705 None:intergenic 50.0%
! GGATTACGTTGGTTGCTTCC+AGG + chr6_2:62717111-62717130 Msa0922980:CDS 50.0%
TTGAACCGACCCGGTTGAAC+TGG + chr6_2:62710431-62710450 Msa0922980:intron 55.0%
TTACGGTCACGCTCTTGCCA+TGG - chr6_2:62711459-62711478 None:intergenic 55.0%
! ATGGCAAGAGCGTGACCGTA+AGG + chr6_2:62711458-62711477 Msa0922980:intron 55.0%
! TGGCAAGAGCGTGACCGTAA+GGG + chr6_2:62711459-62711478 Msa0922980:intron 55.0%
GTCCGTACACTGACACGACA+CGG - chr6_2:62712167-62712186 None:intergenic 55.0%
CTGGGGAAACACTGCAGGAA+GGG + chr6_2:62712293-62712312 Msa0922980:CDS 55.0%
CTAGGATTGCCAGACACTGG+AGG + chr6_2:62712456-62712475 Msa0922980:CDS 55.0%
AAAACCTGGCCTCCAGTGTC+TGG - chr6_2:62712468-62712487 None:intergenic 55.0%
TGGTGTACCGTCTCGACATG+TGG + chr6_2:62712558-62712577 Msa0922980:intron 55.0%
GAGACTACGCGACAAAGTCC+CGG - chr6_2:62714382-62714401 None:intergenic 55.0%
GGACTTTGTCGCGTAGTCTC+TGG + chr6_2:62714382-62714401 Msa0922980:CDS 55.0%
ACATTAGCGGCCTAGTCGAG+TGG + chr6_2:62715020-62715039 Msa0922980:CDS 55.0%
TCTTCGCGAACCACTCGACT+AGG - chr6_2:62715033-62715052 None:intergenic 55.0%
TTGTGCTGCATCATGCCCCT+TGG - chr6_2:62716326-62716345 None:intergenic 55.0%
! GGGTGGTAATGCTGCCAACT+GGG - chr6_2:62716371-62716390 None:intergenic 55.0%
! TGGGTGGTAATGCTGCCAAC+TGG - chr6_2:62716372-62716391 None:intergenic 55.0%
GCAACACTCGTTCGCCACAT+TGG - chr6_2:62716695-62716714 None:intergenic 55.0%
AAGGGCTGGGGAAACACTGC+AGG + chr6_2:62712288-62712307 Msa0922980:CDS 60.0%
GCTGGGGAAACACTGCAGGA+AGG + chr6_2:62712292-62712311 Msa0922980:CDS 60.0%
ATTGCCAGACACTGGAGGCC+AGG + chr6_2:62712461-62712480 Msa0922980:CDS 60.0%
CGGTGGACCACATGTCGAGA+CGG - chr6_2:62712568-62712587 None:intergenic 60.0%
GGGTCGTGAGCTTCTGCTTC+TGG - chr6_2:62712643-62712662 None:intergenic 60.0%
TACGCGACAAAGTCCCGGCA+TGG - chr6_2:62714377-62714396 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 62709958 62717381 62709958 ID=Msa0922980;Name=Msa0922980
chr6_2 mRNA 62709958 62717381 62709958 ID=Msa0922980-mRNA-1;Parent=Msa0922980;Name=Msa0922980-mRNA-1;_AED=0.07;_eAED=0.07;_QI=66|1|1|1|1|1|14|178|910
chr6_2 exon 62709958 62710130 62709958 ID=Msa0922980-mRNA-1:exon:9711;Parent=Msa0922980-mRNA-1
chr6_2 exon 62710729 62711016 62710729 ID=Msa0922980-mRNA-1:exon:9712;Parent=Msa0922980-mRNA-1
chr6_2 exon 62711596 62711788 62711596 ID=Msa0922980-mRNA-1:exon:9713;Parent=Msa0922980-mRNA-1
chr6_2 exon 62711907 62712025 62711907 ID=Msa0922980-mRNA-1:exon:9714;Parent=Msa0922980-mRNA-1
chr6_2 exon 62712266 62712482 62712266 ID=Msa0922980-mRNA-1:exon:9715;Parent=Msa0922980-mRNA-1
chr6_2 exon 62713021 62713116 62713021 ID=Msa0922980-mRNA-1:exon:9716;Parent=Msa0922980-mRNA-1
chr6_2 exon 62713313 62713486 62713313 ID=Msa0922980-mRNA-1:exon:9717;Parent=Msa0922980-mRNA-1
chr6_2 exon 62713598 62713714 62713598 ID=Msa0922980-mRNA-1:exon:9718;Parent=Msa0922980-mRNA-1
chr6_2 exon 62714054 62714220 62714054 ID=Msa0922980-mRNA-1:exon:9719;Parent=Msa0922980-mRNA-1
chr6_2 exon 62714333 62714557 62714333 ID=Msa0922980-mRNA-1:exon:9720;Parent=Msa0922980-mRNA-1
chr6_2 exon 62714955 62715521 62714955 ID=Msa0922980-mRNA-1:exon:9721;Parent=Msa0922980-mRNA-1
chr6_2 exon 62715734 62715872 62715734 ID=Msa0922980-mRNA-1:exon:9722;Parent=Msa0922980-mRNA-1
chr6_2 exon 62716241 62716416 62716241 ID=Msa0922980-mRNA-1:exon:9723;Parent=Msa0922980-mRNA-1
chr6_2 exon 62717056 62717381 62717056 ID=Msa0922980-mRNA-1:exon:9724;Parent=Msa0922980-mRNA-1
chr6_2 five_prime_UTR 62709958 62710023 62709958 ID=Msa0922980-mRNA-1:five_prime_utr;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62710024 62710130 62710024 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62710729 62711016 62710729 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62711596 62711788 62711596 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62711907 62712025 62711907 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62712266 62712482 62712266 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62713021 62713116 62713021 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62713313 62713486 62713313 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62713598 62713714 62713598 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62714054 62714220 62714054 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62714333 62714557 62714333 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62714955 62715521 62714955 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62715734 62715872 62715734 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62716241 62716416 62716241 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 CDS 62717056 62717203 62717056 ID=Msa0922980-mRNA-1:cds;Parent=Msa0922980-mRNA-1
chr6_2 three_prime_UTR 62717204 62717381 62717204 ID=Msa0922980-mRNA-1:three_prime_utr;Parent=Msa0922980-mRNA-1
Gene Sequence

>Msa0922980

ATGGCTTCTACTTCAAGTTCTGCTTTGAAAAGATCTGATTCAATTGCTGATAGCATGCCTGATGCCTTGAAACAAAGCCGTTTCCATATGAAGAAATGCTTTGCCAGGTTGGTTGCAAATGGGAAAAGGTTAGTGAGACTAAATCACATAATGGAAGATGTGGAAAAAACCATTGAAGATAAAAATGAGAGGAAAAAGCTTTTGGAGGGCTTATTCGGATACATCCTAAGTTGTACACAGGAGGCAGCTATTGTTCCACCATATGTTGTTTTTGCTGTTAGGCCTAATCCAGGTTTCTGGGAATATGTTAAAGTGAATGCAGATGATTTGGAAGTAGATGGTATTGAGCCTTCAGAATACTTGAAATACAAGGAAATGGTATTTGATGAGAAGTGGGCAAATGATGAAAATGCTTTAGAGATAGATTTTGAGGCTATTGATTTCACCACACCTCATATGGCACTTTCATCTTCTATTGGAAAAGGACTTGATTTTACTACTAGGATCTTGACCTCAAGGTTGAGTGAGAGTTCACACTGTGAAAATCCATTGCTTAATTACTTATTAAGCCTTAATCATCAAGGAGAGAATCTTATGATCAAAGACACTTTGAATACAATACCAAAGCTTCAGAAAGCATTGAATCTAGCAGAAGCATATGTATCCGCACATCACAAAGACACACCATACCAGAATTTTGAAAACAGGTTTAGAGAATGGGGATTTGATAAGGGCTGGGGAAACACTGCAGGAAGGGTAAAAGAGACAATGAGAATGCTTTCTGAGGTACTAGAAGCAGGAGATCCAATTAAAATGGAATCACTTTTCAGCAGGCTACCAAACATGTTCAACATTGTTATTTTCTCTATTCATGGATATTTTGGCCAAGCAGATGTTCTAGGATTGCCAGACACTGGAGGCCAGGTGGTATACATTCTTGATCAAGTAAGAGCATTAGAAGAAGAGCTACTCCAAAAGATTGAGTTGCAAGGCCTTAATGTGAAGCCTCAGATTCTTGTGGTTACACGTCTGATACCGAATGCAAAAGGGACAACATGTAATCAAGAACTTGAACCTATCATCAAAACTAAGCATTCACACATTCTTAGAGTCCCTTTCTGGACAGAGAAGGGAATTCTATCCCAATGGGTGTCGCGATTCGATATCTATCCTTATTTAGAAAGATTTGCTCAGGATTCTACTACCAAGATTCTTGAACTTATGGATGGAAAACCTGACCTCATTATTGGAAATTATACTGATGGAAACTTGGTTTCATCCTTAATGGCTTCTAAACTTGGTGTAACTCAGGCAACCATTGCTCATGCTTTGGAGAAGACAAAATATGAAGATTCAGATGCTAAATGGAATAGTTTTGAAGAAAAGTATCACTTTTCAAGTCAGTTCACAGCTGATCTAATCGCAATGAATTCCGCTGATTTTATCATAACTAGTACATACCAAGAAATTGCTGGAAGCAAGGATAGGCCAGGGCAGTATGAAACTCACACTGCATTTACCATGCCGGGACTTTGTCGCGTAGTCTCTGGCATCAATGTATTTGATCCAAAGTTCAACATTGCTGCTCCAGGAGCTGATCAATCTGTCTACTTCCCTTTCACCGAGAAGAAGCAAAGATTGACCGCTTTTCAACCTGCCATTGAAGAACTACTTTATAGTAAGGTTGAAAATGAAGAACACATTGGATTTTTGGAAGACAAGAAGAAACCTATAATCTTCTCAATGGCAAGGCTTGACAAAGTGAAAAACATTAGCGGCCTAGTCGAGTGGTTCGCGAAGAACAAGAGACTAAGAAGCTTGGTAAATCTTGTAATTGTTGGAGGATTCTTCGATCCATCAAAATCGAAAGACAGAGAAGAAACGGAAGAAATCAAAAAGATGCATTACTTGATGAAAGAATACAAACTGCAAGGTCAGTTCAGATGGATTGCGGCGCAAACTGATAGATATCGCAACGGAGAGCTTTACCGATGTATCGCAGACACAAAAGGAGCTTTTGTTCAACCAGCACTGTATGAAGCTTTTGGTCTAACAGTCATTGAGGCAATGAACTGTGGATTACCAACTTTTGCAACAAATCAAGGCGGTCCAGCTGAAATCATTGTTGATGGTGTCTCAGGTTTTCATATTGATCCTCATAATGGAGATGAATCAATCAACAAGATTTCTGAATTTTTTGAGAAGTGCAAGACTAATCCTGAACACTGGAACATAATGTCTAAAGCTGGTCTTCAAAGAATCAATGAATGCTATACATGGAAGATATATGCAAACAAAGTGTTGAATATGGGATCAATTTATGGGTTTTGGAGAGAGTTGAACAAAGAACAAAAGTTGGCAAAGGAAAGATACATACAAATGTTTTATAATCTTCAATTTAGGAACTTGGCAAGAAAGGTACCAATTCCTAAGGTACCCCAAGAACCACAACCAATGTCAACAACTCCTGCCAAAAAAGCAGAAGCTACTTCCAAGGGGCATGATGCAGCACAAGCAAAAGCTGAAGTACCTCAAACCCAGTTGGCAGCATTACCACCCAAAATTGAATCTAAGCTAACATCAAGTGGTGAATCTTCAAGTAAGGAACTAGCTGCAAAACAAAGTGGTGATCTTTATTCTGGATTACGTTGGTTGCTTCCAGGAATTGCTTTTATGTTCATCATTCATTATCTCTCTAAGTATTTGGAACATTTATTCACACGAGAGCAATAA

Protein sequence

>Msa0922980

MASTSSSALKRSDSIADSMPDALKQSRFHMKKCFARLVANGKRLVRLNHIMEDVEKTIEDKNERKKLLEGLFGYILSCTQEAAIVPPYVVFAVRPNPGFWEYVKVNADDLEVDGIEPSEYLKYKEMVFDEKWANDENALEIDFEAIDFTTPHMALSSSIGKGLDFTTRILTSRLSESSHCENPLLNYLLSLNHQGENLMIKDTLNTIPKLQKALNLAEAYVSAHHKDTPYQNFENRFREWGFDKGWGNTAGRVKETMRMLSEVLEAGDPIKMESLFSRLPNMFNIVIFSIHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLQKIELQGLNVKPQILVVTRLIPNAKGTTCNQELEPIIKTKHSHILRVPFWTEKGILSQWVSRFDIYPYLERFAQDSTTKILELMDGKPDLIIGNYTDGNLVSSLMASKLGVTQATIAHALEKTKYEDSDAKWNSFEEKYHFSSQFTADLIAMNSADFIITSTYQEIAGSKDRPGQYETHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPFTEKKQRLTAFQPAIEELLYSKVENEEHIGFLEDKKKPIIFSMARLDKVKNISGLVEWFAKNKRLRSLVNLVIVGGFFDPSKSKDREETEEIKKMHYLMKEYKLQGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPHNGDESINKISEFFEKCKTNPEHWNIMSKAGLQRINECYTWKIYANKVLNMGSIYGFWRELNKEQKLAKERYIQMFYNLQFRNLARKVPIPKVPQEPQPMSTTPAKKAEATSKGHDAAQAKAEVPQTQLAALPPKIESKLTSSGESSSKELAAKQSGDLYSGLRWLLPGIAFMFIIHYLSKYLEHLFTREQ*