Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966160 | XP_013453245.1 | 59.016 | 61 | 25 | 0 | 1 | 61 | 1 | 61 | 1.72e-11 | 79.3 |
| Msa0966160 | XP_013453245.1 | 68.432 | 491 | 71 | 10 | 107 | 515 | 1 | 489 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966160 | sp|Q6H501|HKT6_ORYSJ | 35.343 | 481 | 216 | 13 | 115 | 515 | 10 | 475 | 1.23e-67 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025090 | Msa0966160 | 0.801097 | 1.057469e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966160 | MtrunA17_Chr6g0488721 | 68.432 | 491 | 71 | 10 | 107 | 515 | 1 | 489 | 0.0 | 580 |
| Msa0966160 | MtrunA17_Chr6g0488721 | 35.542 | 166 | 51 | 2 | 1 | 110 | 1 | 166 | 5.31e-21 | 96.3 |
| Msa0966160 | MtrunA17_Chr6g0488681 | 55.556 | 495 | 133 | 9 | 107 | 515 | 1 | 494 | 2.48e-160 | 467 |
| Msa0966160 | MtrunA17_Chr6g0488681 | 55.738 | 183 | 24 | 3 | 1 | 126 | 1 | 183 | 2.91e-48 | 175 |
| Msa0966160 | MtrunA17_Chr6g0488671 | 50.515 | 388 | 101 | 10 | 122 | 429 | 5 | 381 | 8.91e-99 | 303 |
| Msa0966160 | MtrunA17_Chr6g0488671 | 53.846 | 78 | 35 | 1 | 50 | 126 | 94 | 171 | 1.83e-14 | 75.1 |
| Msa0966160 | MtrunA17_Chr6g0488731 | 43.478 | 368 | 160 | 9 | 184 | 514 | 123 | 479 | 6.00e-72 | 238 |
| Msa0966160 | MtrunA17_Chr6g0488711 | 39.068 | 279 | 125 | 8 | 184 | 429 | 109 | 375 | 3.37e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966160 | AT4G10310.1 | 38.187 | 364 | 181 | 7 | 184 | 514 | 92 | 444 | 1.29e-65 | 221 |
Find 104 sgRNAs with CRISPR-Local
Find 527 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTAAGAACAAACCCTTTA+TGG | 0.066811 | 6_3:-94273299 | Msa0966160:CDS |
| GATTCATGTGATTTAATATT+TGG | 0.111690 | 6_3:+94268607 | None:intergenic |
| GTATTTGTCTATGAAATATT+TGG | 0.172984 | 6_3:-94268557 | Msa0966160:CDS |
| AAATTAGAATGACATATAAT+TGG | 0.218390 | 6_3:+94262155 | None:intergenic |
| CTCATTCCACAAGTACTTCT+TGG | 0.250746 | 6_3:-94268307 | Msa0966160:CDS |
| TTCACATCTCTTTCAACTTT+AGG | 0.254922 | 6_3:-94273261 | Msa0966160:intron |
| TCATCATGTAAGCCCTCTTT+TGG | 0.256450 | 6_3:+94262698 | None:intergenic |
| CCCATAAAGGGTTTGTTCTT+AGG | 0.267357 | 6_3:+94273298 | None:intergenic |
| TATACAATTTGAACCCATAA+AGG | 0.282103 | 6_3:+94273285 | None:intergenic |
| GAAATCTTTACCTCCATGTT+AGG | 0.285989 | 6_3:-94268778 | Msa0966160:CDS |
| CACATAATGGATTTGCTCTT+AGG | 0.295579 | 6_3:+94269010 | None:intergenic |
| ATTAACTTCGATCTCATTCA+TGG | 0.296896 | 6_3:+94262652 | None:intergenic |
| CCTAAGAACAAACCCTTTAT+GGG | 0.306726 | 6_3:-94273298 | Msa0966160:CDS |
| GAAACACACTCTTTATCTTA+TGG | 0.310209 | 6_3:-94268158 | Msa0966160:CDS |
| GCCGCCGCTCCTTCTCCTTC+TGG | 0.315411 | 6_3:+94262476 | None:intergenic |
| TATAGAATTTGAACACATAA+TGG | 0.317950 | 6_3:+94268997 | None:intergenic |
| TATTTGTCTATGAAATATTT+GGG | 0.336831 | 6_3:-94268556 | Msa0966160:intron |
| CGTGTCTTGAATTTATGCTT+TGG | 0.390885 | 6_3:+94268023 | None:intergenic |
| TAAGATTGTTAGTGTTGTAA+TGG | 0.398843 | 6_3:-94262540 | Msa0966160:three_prime_UTR |
| ATACAATTTGAACCCATAAA+GGG | 0.401747 | 6_3:+94273286 | None:intergenic |
| GGTTACAAACACTTGTTACA+TGG | 0.403785 | 6_3:-94268181 | Msa0966160:CDS |
| AATTATATCACAAGCAATCT+TGG | 0.407295 | 6_3:-94267975 | Msa0966160:CDS |
| ACAATCAAGATGGAGATCTT+AGG | 0.409146 | 6_3:-94269141 | Msa0966160:intron |
| AATTCAGATTGAAGTTGAAA+TGG | 0.415458 | 6_3:-94268668 | Msa0966160:CDS |
| CTGAATTTGATCAACAATGA+TGG | 0.416216 | 6_3:+94268684 | None:intergenic |
| CAAGGGAGGAATGAGGTATA+AGG | 0.417015 | 6_3:+94266992 | None:intergenic |
| TTTAATATTTGGCTTTGATA+AGG | 0.417107 | 6_3:+94268618 | None:intergenic |
| ACTATAGAAACAAAAGAGAT+TGG | 0.417735 | 6_3:+94264482 | None:intergenic |
| TCATTCCACAAGTACTTCTT+GGG | 0.420368 | 6_3:-94268306 | Msa0966160:CDS |
| GTAGATGTGGTGTGAGTTGA+AGG | 0.428182 | 6_3:-94262377 | Msa0966160:three_prime_UTR |
| ATATTGCTGTTGAAGTTGTC+AGG | 0.430083 | 6_3:-94266793 | Msa0966160:intron |
| CTTATACCTCATTCCTCCCT+TGG | 0.433883 | 6_3:-94266991 | Msa0966160:CDS |
| AATGGAAATTGAAAACTATA+TGG | 0.441067 | 6_3:-94262522 | Msa0966160:three_prime_UTR |
| CTCACTGCTTTCTGACAATC+CGG | 0.446157 | 6_3:+94266958 | None:intergenic |
| TGTTGTGATTCTTATGTTGA+AGG | 0.449563 | 6_3:-94264345 | Msa0966160:three_prime_UTR |
| TGAATTTGATCAACAATGAT+GGG | 0.452048 | 6_3:+94268685 | None:intergenic |
| GTAGCACAAGTGAAAATTTG+AGG | 0.459197 | 6_3:-94268579 | Msa0966160:CDS |
| AAATCTTTACCTCCATGTTA+GGG | 0.460275 | 6_3:-94268777 | Msa0966160:CDS |
| GTTTCAACATTTGCAAGTTG+TGG | 0.462060 | 6_3:-94268391 | Msa0966160:CDS |
| CTCCCTTGGAAAGACGGATC+CGG | 0.464536 | 6_3:-94266977 | Msa0966160:CDS |
| TGGAATTCAGAAGGTTTGAA+AGG | 0.480618 | 6_3:-94268082 | Msa0966160:intron |
| TGAAACTGTGGTGGCTGAAA+CGG | 0.481952 | 6_3:+94268879 | None:intergenic |
| TTGAACAATGTAGAGGAGGT+TGG | 0.493563 | 6_3:-94268202 | Msa0966160:CDS |
| GCTCCTTCTCCTTCTGGTTG+CGG | 0.498102 | 6_3:+94262482 | None:intergenic |
| AGGAGAAGGAGCGGCGGCTA+TGG | 0.498537 | 6_3:-94262471 | Msa0966160:three_prime_UTR |
| GTGAAAGAAGTCCTGCGATT+TGG | 0.504851 | 6_3:-94262736 | Msa0966160:three_prime_UTR |
| TGTAATCTTTGATTTGCTGT+TGG | 0.505943 | 6_3:-94262775 | Msa0966160:three_prime_UTR |
| AATTTGTTCAACATTGAAAG+TGG | 0.506569 | 6_3:+94272969 | None:intergenic |
| ATATGACATGATTTAGATCA+AGG | 0.507574 | 6_3:-94264283 | Msa0966160:intron |
| GGAATTCAGAAGGTTTGAAA+GGG | 0.512872 | 6_3:-94268081 | Msa0966160:intron |
| CTATAGAAACAAAAGAGATT+GGG | 0.515222 | 6_3:+94264483 | None:intergenic |
| GTTACAAACACTTGTTACAT+GGG | 0.518560 | 6_3:-94268180 | Msa0966160:CDS |
| ATAAAGGGTTTGTTCTTAGG+AGG | 0.524231 | 6_3:+94273301 | None:intergenic |
| AATCCGGATCCGTCTTTCCA+AGG | 0.531162 | 6_3:+94266974 | None:intergenic |
| TTTAGTACTTGTTTAGCACT+AGG | 0.532880 | 6_3:+94268457 | None:intergenic |
| CCACCGCAACCAGAAGGAGA+AGG | 0.537496 | 6_3:-94262485 | Msa0966160:three_prime_UTR |
| TACAAAATCTCAAGCATGGA+GGG | 0.537636 | 6_3:+94268272 | None:intergenic |
| AAATGAAATGTTTGTAGATG+TGG | 0.537685 | 6_3:-94262390 | Msa0966160:three_prime_UTR |
| GGTGATACAGTGTCAGTATG+AGG | 0.540392 | 6_3:-94262607 | Msa0966160:three_prime_UTR |
| TTGAAGACATTGAAATTGAG+AGG | 0.543741 | 6_3:+94266815 | None:intergenic |
| AACTGAGAGGAAACAATTGA+AGG | 0.543924 | 6_3:-94266843 | Msa0966160:CDS |
| TCATGTCATATTGATTTCGC+CGG | 0.549696 | 6_3:+94264295 | None:intergenic |
| TATTCCAACAAATGAAAACA+TGG | 0.552785 | 6_3:-94268365 | Msa0966160:CDS |
| TCATTCCTCCCTTGGAAAGA+CGG | 0.556186 | 6_3:-94266983 | Msa0966160:CDS |
| ATAATGGATTTGCTCTTAGG+AGG | 0.556646 | 6_3:+94269013 | None:intergenic |
| AAAGAAGTCCTGCGATTTGG+TGG | 0.561416 | 6_3:-94262733 | Msa0966160:three_prime_UTR |
| AGTTCATCCCACCAAATCGC+AGG | 0.565089 | 6_3:+94262725 | None:intergenic |
| CACAGTTTCAAGCATGTCCA+CGG | 0.566687 | 6_3:-94268866 | Msa0966160:intron |
| GTGCGGCCACCGCAACCAGA+AGG | 0.569602 | 6_3:-94262491 | Msa0966160:three_prime_UTR |
| CATATACAAAATCTCAAGCA+TGG | 0.570855 | 6_3:+94268268 | None:intergenic |
| TCTTTGATTTGCTGTTGGTG+TGG | 0.571367 | 6_3:-94262770 | Msa0966160:three_prime_UTR |
| TTGATAAGGAAGTTATGTGA+AGG | 0.575813 | 6_3:+94268632 | None:intergenic |
| ATCCGGATCCGTCTTTCCAA+GGG | 0.578745 | 6_3:+94266975 | None:intergenic |
| CCTTCTCCTTCTGGTTGCGG+TGG | 0.584742 | 6_3:+94262485 | None:intergenic |
| TTTGAGATGAAGTGTTACAA+AGG | 0.595184 | 6_3:+94269094 | None:intergenic |
| GAATTTGATCAACAATGATG+GGG | 0.595346 | 6_3:+94268686 | None:intergenic |
| AGCATAAATTCAAGACACGC+TGG | 0.597785 | 6_3:-94268019 | Msa0966160:CDS |
| AATGAAATAAAGCCCTAACA+TGG | 0.597904 | 6_3:+94268765 | None:intergenic |
| AATTGAAAACTATATGGTGG+TGG | 0.600622 | 6_3:-94262516 | Msa0966160:three_prime_UTR |
| GGATGAACTAGATCCAAAAG+AGG | 0.603004 | 6_3:-94262711 | Msa0966160:three_prime_UTR |
| TGAAAACTATATGGTGGTGG+AGG | 0.605543 | 6_3:-94262513 | Msa0966160:three_prime_UTR |
| GTGTTCCCAAGAAGTACTTG+TGG | 0.605805 | 6_3:+94268301 | None:intergenic |
| AAAGAAAGTTCACTTCTCCA+TGG | 0.607605 | 6_3:-94264910 | Msa0966160:intron |
| TAGCACTAGGAATCATTGCA+AGG | 0.608330 | 6_3:+94268470 | None:intergenic |
| ACTATATGGTGGTGGAGGTG+CGG | 0.615339 | 6_3:-94262508 | Msa0966160:three_prime_UTR |
| GCAACCAGAAGGAGAAGGAG+CGG | 0.630733 | 6_3:-94262480 | Msa0966160:three_prime_UTR |
| GGGAGGAATGAGGTATAAGG+TGG | 0.631476 | 6_3:+94266995 | None:intergenic |
| ACCAGAAGGAGAAGGAGCGG+CGG | 0.633155 | 6_3:-94262477 | Msa0966160:three_prime_UTR |
| CGGATCCGTCTTTCCAAGGG+AGG | 0.634629 | 6_3:+94266978 | None:intergenic |
| GTCTTTCCAAGGGAGGAATG+AGG | 0.635044 | 6_3:+94266985 | None:intergenic |
| GGAATGAGGTATAAGGTGGA+AGG | 0.636325 | 6_3:+94266999 | None:intergenic |
| GATTGTCAGAAAGCAGTGAG+AGG | 0.639761 | 6_3:-94266955 | Msa0966160:CDS |
| CGTGGACATGCTTGAAACTG+TGG | 0.640517 | 6_3:+94268867 | None:intergenic |
| GGACATGCTTGAAACTGTGG+TGG | 0.641655 | 6_3:+94268870 | None:intergenic |
| TTGCTTGTGATATAATTGAG+AGG | 0.644531 | 6_3:+94267981 | None:intergenic |
| TGAGAGAAACTAACATCATG+AGG | 0.646651 | 6_3:+94267942 | None:intergenic |
| ACACGCTGGAGAAACTATTG+TGG | 0.648012 | 6_3:-94268005 | Msa0966160:CDS |
| TCATTCATGGAGTTTAGCAG+CGG | 0.648637 | 6_3:+94262665 | None:intergenic |
| TACTAGTTTGCATAACTGAG+AGG | 0.669787 | 6_3:-94266856 | Msa0966160:CDS |
| GGAAATTGAAAACTATATGG+TGG | 0.682928 | 6_3:-94262519 | Msa0966160:three_prime_UTR |
| GATGAACTAGATCCAAAAGA+GGG | 0.688786 | 6_3:-94262710 | Msa0966160:three_prime_UTR |
| ATACAAAATCTCAAGCATGG+AGG | 0.690104 | 6_3:+94268271 | None:intergenic |
| AAGAAGTCCTGCGATTTGGT+GGG | 0.691563 | 6_3:-94262732 | Msa0966160:three_prime_UTR |
| GAAATAAAGCCCTAACATGG+AGG | 0.692954 | 6_3:+94268768 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | NNNNNNAATAATTAAATAAA+AGG | - | chr6_3:94265060-94265079 | Msa0966160:intron | 0.0% |
| !!! | TTATTATTATTTTTATTATT+AGG | - | chr6_3:94267703-94267722 | Msa0966160:intron | 0.0% |
| !! | NNNAATAATTAAATAAAAGG+AGG | - | chr6_3:94265063-94265082 | Msa0966160:intron | 10.0% |
| !! | NNAATAATTAAATAAAAGGA+GGG | - | chr6_3:94265064-94265083 | Msa0966160:intron | 10.0% |
| !! | AATTATTATCAAAAATTGAT+TGG | - | chr6_3:94267533-94267552 | Msa0966160:intron | 10.0% |
| !!! | ATTTTAATGTAAAAAATATG+TGG | + | chr6_3:94267831-94267850 | None:intergenic | 10.0% |
| !! | AAGATTTAATAAAAAAATTG+AGG | - | chr6_3:94267890-94267909 | Msa0966160:intron | 10.0% |
| !! | AGATTTAATAAAAAAATTGA+GGG | - | chr6_3:94267891-94267910 | Msa0966160:intron | 10.0% |
| !! | AATAATATATATTATCAACT+AGG | - | chr6_3:94269093-94269112 | Msa0966160:CDS | 10.0% |
| !!! | ATTTTAATCATATTTTGTTA+TGG | + | chr6_3:94269446-94269465 | None:intergenic | 10.0% |
| !! | CTAATTCATTAAAAATAATA+AGG | - | chr6_3:94269821-94269840 | Msa0966160:intron | 10.0% |
| !! | AACATACAAAAATAAAAATA+AGG | + | chr6_3:94270799-94270818 | None:intergenic | 10.0% |
| !! | AGAAAATAATAAGAAATATA+AGG | + | chr6_3:94271160-94271179 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAATAAACAAA+AGG | + | chr6_3:94271507-94271526 | None:intergenic | 10.0% |
| !! | TTGTAAAAACAAATTATTAA+TGG | + | chr6_3:94271723-94271742 | None:intergenic | 10.0% |
| !!! | AAGAACAAATCTAAATTTTT+AGG | + | chr6_3:94262393-94262412 | None:intergenic | 15.0% |
| !! | GAAAATTAAACAAAGTAAAT+TGG | - | chr6_3:94262864-94262883 | Msa0966160:intron | 15.0% |
| !!! | GGTTTTTATTTTAGAATTAA+AGG | + | chr6_3:94263038-94263057 | None:intergenic | 15.0% |
| !! | ATTACTTATGAATATATGTA+TGG | + | chr6_3:94263939-94263958 | None:intergenic | 15.0% |
| !! | AAACAAACAAAGAAATTTAA+AGG | - | chr6_3:94265192-94265211 | Msa0966160:intron | 15.0% |
| !!! | GTGATTTATTTATTTTTCTT+TGG | - | chr6_3:94265817-94265836 | Msa0966160:intron | 15.0% |
| !!! | TTATATCCTAATTTTTTTGA+CGG | - | chr6_3:94265984-94266003 | Msa0966160:intron | 15.0% |
| !! | TATTTGTCTATGAAATATTT+GGG | - | chr6_3:94267032-94267051 | Msa0966160:intron | 15.0% |
| !!! | ATTATAATTCTCCATTTTAT+AGG | - | chr6_3:94267074-94267093 | Msa0966160:intron | 15.0% |
| !! | TATTAAAAAATTACAATCCA+AGG | - | chr6_3:94267936-94267955 | Msa0966160:intron | 15.0% |
| !! | TATAACATTTGCAATATTAA+TGG | - | chr6_3:94268182-94268201 | Msa0966160:CDS | 15.0% |
| !! | ATAACATTTGCAATATTAAT+GGG | - | chr6_3:94268183-94268202 | Msa0966160:CDS | 15.0% |
| !! | TCATCTAAATTATACTATTT+AGG | + | chr6_3:94268478-94268497 | None:intergenic | 15.0% |
| !!! | ATTAAAAAGAATCTCTTTTT+TGG | - | chr6_3:94268856-94268875 | Msa0966160:intron | 15.0% |
| !!! | TTAAAAAGAATCTCTTTTTT+GGG | - | chr6_3:94268857-94268876 | Msa0966160:intron | 15.0% |
| !!! | TTTTTGTTTATCATAATGAT+CGG | + | chr6_3:94269195-94269214 | None:intergenic | 15.0% |
| !!! | ATATTTTGTTATGGTATAAA+TGG | + | chr6_3:94269437-94269456 | None:intergenic | 15.0% |
| !!! | GGTAATTTTGTAAAAAAAAT+CGG | + | chr6_3:94270331-94270350 | None:intergenic | 15.0% |
| !! | ATAAAATAAACTTGAAGAAA+TGG | + | chr6_3:94270508-94270527 | None:intergenic | 15.0% |
| !! | AATAAAAATAAGGAATTGAA+TGG | + | chr6_3:94270789-94270808 | None:intergenic | 15.0% |
| !!! | AATTTTTTTCAATCAAAAGA+AGG | + | chr6_3:94271377-94271396 | None:intergenic | 15.0% |
| !! | AATAGATTTAGGTAATAATC+CGG | + | chr6_3:94262930-94262949 | None:intergenic | 20.0% |
| !! | ATAATCAGGTTAATAGATTT+AGG | + | chr6_3:94262941-94262960 | None:intergenic | 20.0% |
| !! | TAAACCGTAAATCAATTTAA+AGG | - | chr6_3:94263206-94263225 | Msa0966160:intron | 20.0% |
| !!! | ATCACCTTTAAATTGATTTA+CGG | + | chr6_3:94263213-94263232 | None:intergenic | 20.0% |
| !! | AAAGTCATAATCAAATTACA+TGG | - | chr6_3:94263290-94263309 | Msa0966160:intron | 20.0% |
| !!! | TATATATGCATGATATCTTT+TGG | + | chr6_3:94263527-94263546 | None:intergenic | 20.0% |
| !! | AAAACATTTATCATGAACAT+TGG | - | chr6_3:94263883-94263902 | Msa0966160:intron | 20.0% |
| !! | ATATGTATATACATAAGATG+TGG | + | chr6_3:94264291-94264310 | None:intergenic | 20.0% |
| !!! | TCTATTTGATGATAATTGAT+TGG | + | chr6_3:94264339-94264358 | None:intergenic | 20.0% |
| !! | AAACATTTACATATGTACTA+TGG | + | chr6_3:94265573-94265592 | None:intergenic | 20.0% |
| !!! | TTTTTAGTAGTGAATAGTTT+TGG | + | chr6_3:94265652-94265671 | None:intergenic | 20.0% |
| !! | TAAAAAAGCAAAAATTAGTG+AGG | - | chr6_3:94265666-94265685 | Msa0966160:intron | 20.0% |
| !! | AAAAAAGCAAAAATTAGTGA+GGG | - | chr6_3:94265667-94265686 | Msa0966160:intron | 20.0% |
| !! | TAGAAAAACTACTTATTCTT+TGG | - | chr6_3:94265840-94265859 | Msa0966160:intron | 20.0% |
| !!! | TGCATTTTTTTTTTTTTGAG+AGG | - | chr6_3:94265959-94265978 | Msa0966160:intron | 20.0% |
| !!! | GCATTTTTTTTTTTTTGAGA+GGG | - | chr6_3:94265960-94265979 | Msa0966160:intron | 20.0% |
| !! | AAACTCCATACATATTATTA+TGG | - | chr6_3:94266253-94266272 | Msa0966160:intron | 20.0% |
| !! | AACTCCATACATATTATTAT+GGG | - | chr6_3:94266254-94266273 | Msa0966160:intron | 20.0% |
| !!! | TTTTCCCATAATAATATGTA+TGG | + | chr6_3:94266261-94266280 | None:intergenic | 20.0% |
| !! | AATATTAGAAACAATCAAGA+TGG | - | chr6_3:94266437-94266456 | Msa0966160:intron | 20.0% |
| !! | TGCTAAGAAAAAAAATGATT+TGG | + | chr6_3:94266535-94266554 | None:intergenic | 20.0% |
| !! | TATAGAATTTGAACACATAA+TGG | + | chr6_3:94266594-94266613 | None:intergenic | 20.0% |
| !!! | AAGAACAAATCTAAGTTTTT+AGG | + | chr6_3:94266684-94266703 | None:intergenic | 20.0% |
| !!! | TTTAATATTTGGCTTTGATA+AGG | + | chr6_3:94266973-94266992 | None:intergenic | 20.0% |
| !! | GATTCATGTGATTTAATATT+TGG | + | chr6_3:94266984-94267003 | None:intergenic | 20.0% |
| !! | GTATTTGTCTATGAAATATT+TGG | - | chr6_3:94267031-94267050 | Msa0966160:intron | 20.0% |
| !!! | TATTTGGGTTATATAATTCT+TGG | - | chr6_3:94267047-94267066 | Msa0966160:intron | 20.0% |
| !! | TAAACAAGTACTAAAAAACA+AGG | - | chr6_3:94267139-94267158 | Msa0966160:intron | 20.0% |
| !! | AAACAAGTACTAAAAAACAA+GGG | - | chr6_3:94267140-94267159 | Msa0966160:intron | 20.0% |
| !! | TATAGTAAAAATTGAGAAAG+TGG | + | chr6_3:94267177-94267196 | None:intergenic | 20.0% |
| !! | ATGTAAAAAATATGTGGATA+TGG | + | chr6_3:94267825-94267844 | None:intergenic | 20.0% |
| !! | TCAAATGTAGAGAATTATAT+GGG | + | chr6_3:94267994-94268013 | None:intergenic | 20.0% |
| !!! | CAATATTAATGGGTTTATAT+AGG | - | chr6_3:94268193-94268212 | Msa0966160:CDS | 20.0% |
| !! | TTACTTTATCTAGGTTTAAT+TGG | - | chr6_3:94268256-94268275 | Msa0966160:intron | 20.0% |
| !! | AGTATAGAAAAATCCAATAT+AGG | + | chr6_3:94268309-94268328 | None:intergenic | 20.0% |
| !!! | ATACTATTTAGGTTTTACTT+TGG | + | chr6_3:94268467-94268486 | None:intergenic | 20.0% |
| !!! | TACTAGGCTAAATTTTATTT+TGG | + | chr6_3:94268501-94268520 | None:intergenic | 20.0% |
| !! | AGTAAACAGTATTATATACT+AGG | + | chr6_3:94268517-94268536 | None:intergenic | 20.0% |
| !!! | AAAGAGATTCTTTTTAATGT+TGG | + | chr6_3:94268854-94268873 | None:intergenic | 20.0% |
| !! | TGTGAATTAGTAGAAAAATA+TGG | - | chr6_3:94269053-94269072 | Msa0966160:CDS | 20.0% |
| !! | AAATATGATTAAAATCAGCA+TGG | - | chr6_3:94269451-94269470 | Msa0966160:intron | 20.0% |
| !! | ATAAATAAATGACACAAAGT+GGG | + | chr6_3:94269584-94269603 | None:intergenic | 20.0% |
| !! | TATAAATAAATGACACAAAG+TGG | + | chr6_3:94269585-94269604 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTTACTTTTTACA+CGG | - | chr6_3:94269664-94269683 | Msa0966160:intron | 20.0% |
| !! | CATCTCTTATAATATAAGAA+AGG | - | chr6_3:94269956-94269975 | Msa0966160:intron | 20.0% |
| !! | CAAAATTCAAATTTAGAAGA+GGG | + | chr6_3:94270122-94270141 | None:intergenic | 20.0% |
| !! | TCAAAATTCAAATTTAGAAG+AGG | + | chr6_3:94270123-94270142 | None:intergenic | 20.0% |
| !!! | ATACTGATTTAACATTAGTT+GGG | + | chr6_3:94270195-94270214 | None:intergenic | 20.0% |
| !!! | TATACTGATTTAACATTAGT+TGG | + | chr6_3:94270196-94270215 | None:intergenic | 20.0% |
| !! | ATATATGTGTAGAAAACAAA+AGG | + | chr6_3:94270352-94270371 | None:intergenic | 20.0% |
| !!! | GTTTCATACCTTTTTTTTTT+TGG | + | chr6_3:94270948-94270967 | None:intergenic | 20.0% |
| !!! | TTAATTTTGTAAGTCAATCA+TGG | + | chr6_3:94271184-94271203 | None:intergenic | 20.0% |
| !! | AAAGAAATACACAATATGAA+TGG | + | chr6_3:94271341-94271360 | None:intergenic | 20.0% |
| !!! | TTTTTCCAATTACAATTTGT+TGG | + | chr6_3:94271412-94271431 | None:intergenic | 20.0% |
| !!! | TGTCATTCTTTATTTCTAAA+AGG | - | chr6_3:94271838-94271857 | Msa0966160:intron | 20.0% |
| !! | TTCTTCTGATAAAACAAAAT+TGG | + | chr6_3:94272192-94272211 | None:intergenic | 20.0% |
| !!! | TCTTTTGATAATACTTCTAT+TGG | + | chr6_3:94272491-94272510 | None:intergenic | 20.0% |
| !!! | AGTCAAGAAGTTTTTTTTAA+TGG | + | chr6_3:94272537-94272556 | None:intergenic | 20.0% |
| !!! | TTAATATCACTTTTCTTGTT+CGG | + | chr6_3:94272560-94272579 | None:intergenic | 20.0% |
| !! | ATGATTATGCAAAAAGAAAA+AGG | - | chr6_3:94272603-94272622 | Msa0966160:intron | 20.0% |
| !!! | TTTTATAGATCTGATACTAA+TGG | + | chr6_3:94272674-94272693 | None:intergenic | 20.0% |
| !! | AATGGAAATTGAAAACTATA+TGG | - | chr6_3:94273066-94273085 | Msa0966160:CDS | 20.0% |
| ! | ATACAATTTGAACCCATAAA+GGG | + | chr6_3:94262305-94262324 | None:intergenic | 25.0% |
| ! | TATACAATTTGAACCCATAA+AGG | + | chr6_3:94262306-94262325 | None:intergenic | 25.0% |
| !!! | TTTTTAGGAGTTTGATCTAA+AGG | + | chr6_3:94262378-94262397 | None:intergenic | 25.0% |
| !! | TGGTAATGATGATTAATTGA+GGG | + | chr6_3:94262479-94262498 | None:intergenic | 25.0% |
| !! | ATGGTAATGATGATTAATTG+AGG | + | chr6_3:94262480-94262499 | None:intergenic | 25.0% |
| ! | ATTACCATCTTAATGTTCAT+AGG | - | chr6_3:94262492-94262511 | Msa0966160:three_prime_UTR | 25.0% |
| !! | AATTTGTTCAACATTGAAAG+TGG | + | chr6_3:94262622-94262641 | None:intergenic | 25.0% |
| ! | AATTCATCTAGAAGTTGAAA+TGG | - | chr6_3:94262638-94262657 | Msa0966160:three_prime_UTR | 25.0% |
| ! | TGCAAGTAGTAAAAGTAAAA+CGG | - | chr6_3:94262742-94262761 | Msa0966160:three_prime_UTR | 25.0% |
| ! | CACAAATATTGTAGAGAATT+CGG | + | chr6_3:94262993-94263012 | None:intergenic | 25.0% |
| ! | TTACGGTTTATATTGTGAAA+CGG | + | chr6_3:94263196-94263215 | None:intergenic | 25.0% |
| !!! | ATCAATAAAAGCATTAAGCA+TGG | - | chr6_3:94263235-94263254 | Msa0966160:intron | 25.0% |
| ! | ATAATCAAATTACATGGCAA+AGG | - | chr6_3:94263296-94263315 | Msa0966160:intron | 25.0% |
| ! | ATAGCAATTAAACAAGAGAA+AGG | - | chr6_3:94263367-94263386 | Msa0966160:intron | 25.0% |
| ! | TAGCAATTAAACAAGAGAAA+GGG | - | chr6_3:94263368-94263387 | Msa0966160:intron | 25.0% |
| ! | TTTACCGCTTAATAGAAATA+GGG | + | chr6_3:94263450-94263469 | None:intergenic | 25.0% |
| !! | TTTTACCGCTTAATAGAAAT+AGG | + | chr6_3:94263451-94263470 | None:intergenic | 25.0% |
| !! | TTCATGATAAATGTTTTTCG+TGG | + | chr6_3:94263880-94263899 | None:intergenic | 25.0% |
| !!! | TTTGTTGATGACTTAATTAG+AGG | + | chr6_3:94264134-94264153 | None:intergenic | 25.0% |
| ! | CTTGCTTATACTTATAAACT+TGG | + | chr6_3:94264366-94264385 | None:intergenic | 25.0% |
| !! | ATTTGTGTATTGGTGAAATT+TGG | + | chr6_3:94264484-94264503 | None:intergenic | 25.0% |
| ! | AAGTGTGTTTGATGAATTAA+TGG | + | chr6_3:94264546-94264565 | None:intergenic | 25.0% |
| !! | TTTTACATAGTTGTTGTAAG+AGG | + | chr6_3:94264732-94264751 | None:intergenic | 25.0% |
| !! | TGTTGTTGTTGAAATGTAAA+AGG | + | chr6_3:94264763-94264782 | None:intergenic | 25.0% |
| !!! | TGTTTTGATAGTTGTTATGT+TGG | + | chr6_3:94264835-94264854 | None:intergenic | 25.0% |
| !! | TTGAGTTGTTGAAATGTAAA+AGG | + | chr6_3:94264874-94264893 | None:intergenic | 25.0% |
| !!! | CTATTGATTTTAACAGAACA+AGG | + | chr6_3:94265409-94265428 | None:intergenic | 25.0% |
| !!! | TTGGCTTTTTCATATATAAC+AGG | + | chr6_3:94265633-94265652 | None:intergenic | 25.0% |
| ! | AAAATTCCTCACAAATTCTT+TGG | + | chr6_3:94265750-94265769 | None:intergenic | 25.0% |
| ! | AGAAAAAGCAAAATTAGAGA+GGG | + | chr6_3:94265793-94265812 | None:intergenic | 25.0% |
| ! | TAGAAAAAGCAAAATTAGAG+AGG | + | chr6_3:94265794-94265813 | None:intergenic | 25.0% |
| ! | CTAATAGTGTAACCAATAAT+TGG | - | chr6_3:94265902-94265921 | Msa0966160:intron | 25.0% |
| ! | AGTATACCGTCAAAAAAATT+AGG | + | chr6_3:94265993-94266012 | None:intergenic | 25.0% |
| !!! | ATATTTGCCACTCTAAAATT+TGG | - | chr6_3:94266022-94266041 | Msa0966160:intron | 25.0% |
| ! | CTTAGGATATCTGATATTTA+AGG | + | chr6_3:94266230-94266249 | None:intergenic | 25.0% |
| ! | TTAAAGAATAATTTCCGTGT+AGG | + | chr6_3:94266366-94266385 | None:intergenic | 25.0% |
| !! | TTAAATACACTCTTTTGCAT+TGG | - | chr6_3:94266382-94266401 | Msa0966160:intron | 25.0% |
| !!! | TTCATCTCTATTTCCTTTTT+TGG | - | chr6_3:94266615-94266634 | Msa0966160:intron | 25.0% |
| !!! | TCATCTCTATTTCCTTTTTT+GGG | - | chr6_3:94266616-94266635 | Msa0966160:intron | 25.0% |
| !!! | TAGGTGTTGTTTAATGTAAA+GGG | + | chr6_3:94266665-94266684 | None:intergenic | 25.0% |
| !!! | TTAGGTGTTGTTTAATGTAA+AGG | + | chr6_3:94266666-94266685 | None:intergenic | 25.0% |
| ! | ATTACCGTATTAATGTTCAT+AGG | - | chr6_3:94266783-94266802 | Msa0966160:intron | 25.0% |
| ! | TGAATTTGATCAACAATGAT+GGG | + | chr6_3:94266906-94266925 | None:intergenic | 25.0% |
| ! | AATTCAGATTGAAGTTGAAA+TGG | - | chr6_3:94266920-94266939 | Msa0966160:CDS | 25.0% |
| ! | TATTCCAACAAATGAAAACA+TGG | - | chr6_3:94267223-94267242 | Msa0966160:intron | 25.0% |
| !!! | GTTGTTTTTAGAAAGAATGT+AGG | - | chr6_3:94267245-94267264 | Msa0966160:intron | 25.0% |
| !! | ATGCTTGAGATTTTGTATAT+GGG | - | chr6_3:94267322-94267341 | Msa0966160:intron | 25.0% |
| !! | AGATTTTGTATATGGGTATT+AGG | - | chr6_3:94267329-94267348 | Msa0966160:intron | 25.0% |
| !! | GATTTTGTATATGGGTATTA+GGG | - | chr6_3:94267330-94267349 | Msa0966160:intron | 25.0% |
| !! | TTTATAAGAAGAAAGAGTGT+AGG | - | chr6_3:94267357-94267376 | Msa0966160:intron | 25.0% |
| !!! | AGTTACTTTGTTTTGTCTAA+TGG | - | chr6_3:94267481-94267500 | Msa0966160:intron | 25.0% |
| ! | AATTATATCACAAGCAATCT+TGG | - | chr6_3:94267613-94267632 | Msa0966160:intron | 25.0% |
| !!! | TATTATTAGGCCATTTTGAA+TGG | - | chr6_3:94267716-94267735 | Msa0966160:intron | 25.0% |
| !!! | ATTATTAGGCCATTTTGAAT+GGG | - | chr6_3:94267717-94267736 | Msa0966160:intron | 25.0% |
| !!! | TTATTAGAGTGTTGTACATT+TGG | + | chr6_3:94267782-94267801 | None:intergenic | 25.0% |
| !!! | CTACATTTGAGTATTTTAGT+GGG | + | chr6_3:94267984-94268003 | None:intergenic | 25.0% |
| !!! | TCTACATTTGAGTATTTTAG+TGG | + | chr6_3:94267985-94268004 | None:intergenic | 25.0% |
| ! | CAAATGTAGAGAATTATATG+TGG | - | chr6_3:94267995-94268014 | Msa0966160:CDS | 25.0% |
| ! | AAAAATGACGAGTTAAACTA+AGG | + | chr6_3:94268044-94268063 | None:intergenic | 25.0% |
| !!! | TAGTTTAACTCGTCATTTTT+AGG | - | chr6_3:94268044-94268063 | Msa0966160:CDS | 25.0% |
| ! | ATGTGAAATATTGCACAAAT+TGG | + | chr6_3:94268103-94268122 | None:intergenic | 25.0% |
| ! | CTCAAATGTAGAGAATTATA+TGG | + | chr6_3:94267993-94268012 | None:intergenic | 25.0% |
| ! | ATGGGTTTATATAGGTTTAA+TGG | - | chr6_3:94268201-94268220 | Msa0966160:CDS | 25.0% |
| ! | TGGGTTTATATAGGTTTAAT+GGG | - | chr6_3:94268202-94268221 | Msa0966160:CDS | 25.0% |
| ! | AACTTGAATGTGCAATATAT+GGG | + | chr6_3:94268238-94268257 | None:intergenic | 25.0% |
| ! | TAACTTGAATGTGCAATATA+TGG | + | chr6_3:94268239-94268258 | None:intergenic | 25.0% |
| !! | ACATTCAAGTTACTTTATCT+AGG | - | chr6_3:94268247-94268266 | Msa0966160:intron | 25.0% |
| ! | AATGTAAACCATACCTATAT+TGG | - | chr6_3:94268293-94268312 | Msa0966160:CDS | 25.0% |
| ! | AGAAAAATCCAATATAGGTA+TGG | + | chr6_3:94268304-94268323 | None:intergenic | 25.0% |
| !!! | TATTTTTTGTGGATTCTCTT+AGG | - | chr6_3:94268412-94268431 | Msa0966160:CDS | 25.0% |
| ! | TTTAATGTTGGAATTAGAGA+GGG | + | chr6_3:94268842-94268861 | None:intergenic | 25.0% |
| !! | TTTTAATGTTGGAATTAGAG+AGG | + | chr6_3:94268843-94268862 | None:intergenic | 25.0% |
| ! | CAGATATTCATAGGAATATA+CGG | - | chr6_3:94269256-94269275 | Msa0966160:intron | 25.0% |
| ! | ATTAACCTGAATTTAAACTC+AGG | + | chr6_3:94269338-94269357 | None:intergenic | 25.0% |
| !!! | ACTAATCATTCGAGTTTTAT+AGG | + | chr6_3:94269391-94269410 | None:intergenic | 25.0% |
| !!! | ACACGGTAATTTTTTTATAG+TGG | - | chr6_3:94269681-94269700 | Msa0966160:intron | 25.0% |
| !! | TGTATTTTACTGATATCCTT+TGG | - | chr6_3:94269876-94269895 | Msa0966160:intron | 25.0% |
| !!! | ACATGCTTACTTTTTTTTGA+GGG | + | chr6_3:94270466-94270485 | None:intergenic | 25.0% |
| ! | TCAACAAAATCAGAAATGAA+AGG | + | chr6_3:94270978-94270997 | None:intergenic | 25.0% |
| !!! | TGTTGTGATTCTTATTTTGA+AGG | - | chr6_3:94271059-94271078 | Msa0966160:intron | 25.0% |
| !!! | ATTCTTATTTTGAAGGTTGA+AGG | - | chr6_3:94271066-94271085 | Msa0966160:intron | 25.0% |
| ! | CTATAGAAACAAAAGAGATT+GGG | + | chr6_3:94271108-94271127 | None:intergenic | 25.0% |
| ! | ACTATAGAAACAAAAGAGAT+TGG | + | chr6_3:94271109-94271128 | None:intergenic | 25.0% |
| !! | AAATGAGACATTTTTGTAAC+CGG | - | chr6_3:94271274-94271293 | Msa0966160:intron | 25.0% |
| ! | ATATGACATGATTTAGATCA+AGG | - | chr6_3:94271305-94271324 | Msa0966160:intron | 25.0% |
| ! | AAAAAAAAAATCAACAGCCA+CGG | - | chr6_3:94271428-94271447 | Msa0966160:intron | 25.0% |
| ! | AAAAATGAAAACAACCATGA+AGG | - | chr6_3:94271598-94271617 | Msa0966160:intron | 25.0% |
| !!! | TAATTTGTTTTTACAACCTG+TGG | - | chr6_3:94271727-94271746 | Msa0966160:intron | 25.0% |
| !!! | GAATATTTTTAAATAGCCAC+AGG | + | chr6_3:94271746-94271765 | None:intergenic | 25.0% |
| !! | CTTACTGCTATTGATTAAAA+AGG | + | chr6_3:94272228-94272247 | None:intergenic | 25.0% |
| !! | AATAAAATCCAAGAAAGTGT+AGG | - | chr6_3:94272273-94272292 | Msa0966160:intron | 25.0% |
| !!! | ATTTTTTTCCTACACTTTCT+TGG | + | chr6_3:94272284-94272303 | None:intergenic | 25.0% |
| ! | CTAATAGAAGAATTACCAAA+AGG | - | chr6_3:94272645-94272664 | Msa0966160:intron | 25.0% |
| ! | AGATCGAAGTTAATCAAAAA+TGG | - | chr6_3:94272945-94272964 | Msa0966160:intron | 25.0% |
| !!! | ATCAAAAATGGTGTTTTTAG+TGG | - | chr6_3:94272957-94272976 | Msa0966160:intron | 25.0% |
| ! | TAAGATTGTTAGTGTTGTAA+TGG | - | chr6_3:94273048-94273067 | Msa0966160:CDS | 25.0% |
| ! | AAATGAAATGTTTGTAGATG+TGG | - | chr6_3:94273198-94273217 | Msa0966160:intron | 25.0% |
| ! | AAATAAAAAATATGTGGGTG+TGG | - | chr6_3:94273254-94273273 | Msa0966160:intron | 25.0% |
| TTCACATCTCTTTCAACTTT+AGG | - | chr6_3:94262327-94262346 | Msa0966160:three_prime_UTR | 30.0% | |
| !! | TCTCTTTCAACTTTAGGTTT+TGG | - | chr6_3:94262333-94262352 | Msa0966160:three_prime_UTR | 30.0% |
| AAAAATTTGCATTTCAACCG+TGG | + | chr6_3:94262451-94262470 | None:intergenic | 30.0% | |
| AAAAAAAAGTCCTACCATTG+AGG | + | chr6_3:94262532-94262551 | None:intergenic | 30.0% | |
| AGTTGAAATGGTTACAAATG+AGG | - | chr6_3:94262650-94262669 | Msa0966160:three_prime_UTR | 30.0% | |
| TTGTGACTTAATCGAACAAA+AGG | - | chr6_3:94262814-94262833 | Msa0966160:intron | 30.0% | |
| ! | ACTTAATAAGAGAAAAGCGT+TGG | - | chr6_3:94262892-94262911 | Msa0966160:intron | 30.0% |
| !! | CTTAATAAGAGAAAAGCGTT+GGG | - | chr6_3:94262893-94262912 | Msa0966160:intron | 30.0% |
| !! | TTAATAAGAGAAAAGCGTTG+GGG | - | chr6_3:94262894-94262913 | Msa0966160:intron | 30.0% |
| TCGATTCAATTGTGATAATC+AGG | + | chr6_3:94262955-94262974 | None:intergenic | 30.0% | |
| AATTAAAGGTTCTGTCACTA+AGG | + | chr6_3:94263024-94263043 | None:intergenic | 30.0% | |
| TGCAAATTCACTAAGGAATT+AGG | + | chr6_3:94263059-94263078 | None:intergenic | 30.0% | |
| TCTAATCTGCAAATTCACTA+AGG | + | chr6_3:94263066-94263085 | None:intergenic | 30.0% | |
| AGAATTCTCAAATAGTTCCA+AGG | - | chr6_3:94263104-94263123 | Msa0966160:intron | 30.0% | |
| GAATTCTCAAATAGTTCCAA+GGG | - | chr6_3:94263105-94263124 | Msa0966160:intron | 30.0% | |
| CATCTATTCCTAGATTACAA+AGG | - | chr6_3:94263132-94263151 | Msa0966160:intron | 30.0% | |
| TTTATATTGTGAAACGGAAG+TGG | + | chr6_3:94263190-94263209 | None:intergenic | 30.0% | |
| TAAACAAGAGAAAGGGATAA+AGG | - | chr6_3:94263375-94263394 | Msa0966160:intron | 30.0% | |
| !! | AACACCCTATTTCTATTAAG+CGG | - | chr6_3:94263443-94263462 | Msa0966160:intron | 30.0% |
| TATGAGGATTTATTTGACCA+TGG | + | chr6_3:94263606-94263625 | None:intergenic | 30.0% | |
| !! | ACTTGGAGTATTTTCATATG+AGG | + | chr6_3:94263622-94263641 | None:intergenic | 30.0% |
| TAATAATGATCATGTGATGC+TGG | + | chr6_3:94264050-94264069 | None:intergenic | 30.0% | |
| ! | TTGATTGGATGATAATGATG+AGG | + | chr6_3:94264324-94264343 | None:intergenic | 30.0% |
| ! | GTACTCTTACTTAGATGTTT+TGG | + | chr6_3:94264681-94264700 | None:intergenic | 30.0% |
| TGTTGTTGAAATGTAAAAGG+AGG | + | chr6_3:94264760-94264779 | None:intergenic | 30.0% | |
| ACATTTCAACAACAACAACA+TGG | - | chr6_3:94264766-94264785 | Msa0966160:intron | 30.0% | |
| AGTTGTTGAAATGTAAAAGG+AGG | + | chr6_3:94264871-94264890 | None:intergenic | 30.0% | |
| GATGTGATTGTTGAATGTAT+GGG | + | chr6_3:94264922-94264941 | None:intergenic | 30.0% | |
| AGATGTGATTGTTGAATGTA+TGG | + | chr6_3:94264923-94264942 | None:intergenic | 30.0% | |
| GATCAAAAGTAGACAAATTG+TGG | + | chr6_3:94265164-94265183 | None:intergenic | 30.0% | |
| GACACTATTAAAATTGTCTC+TGG | + | chr6_3:94265479-94265498 | None:intergenic | 30.0% | |
| TAAAAAAATTCTGCTCTGTC+TGG | - | chr6_3:94265507-94265526 | Msa0966160:intron | 30.0% | |
| TTATATCTAATCTCCATCGT+AGG | + | chr6_3:94266054-94266073 | None:intergenic | 30.0% | |
| TAGTAGGTAAAAATGGATGA+TGG | - | chr6_3:94266192-94266211 | Msa0966160:intron | 30.0% | |
| !! | TATGTATGGAGTTTTGTCTT+AGG | + | chr6_3:94266247-94266266 | None:intergenic | 30.0% |
| ! | TTTGAGATGAAGTGTTACAA+AGG | + | chr6_3:94266497-94266516 | None:intergenic | 30.0% |
| !! | TCTTAGCAGCATGTTTTTAT+CGG | - | chr6_3:94266547-94266566 | Msa0966160:intron | 30.0% |
| !!! | TCTATTTCCTTTTTTGGGTT+TGG | - | chr6_3:94266621-94266640 | Msa0966160:intron | 30.0% |
| AAAAATTTCCATTTCAACCG+TGG | + | chr6_3:94266742-94266761 | None:intergenic | 30.0% | |
| CGGTAATGATGATTAATTGA+GGG | + | chr6_3:94266770-94266789 | None:intergenic | 30.0% | |
| ACGGTAATGATGATTAATTG+AGG | + | chr6_3:94266771-94266790 | None:intergenic | 30.0% | |
| ACCACCTATGAACATTAATA+CGG | + | chr6_3:94266790-94266809 | None:intergenic | 30.0% | |
| AAATCTTTACCTCCATGTTA+GGG | - | chr6_3:94266811-94266830 | Msa0966160:CDS | 30.0% | |
| AATGAAATAAAGCCCTAACA+TGG | + | chr6_3:94266826-94266845 | None:intergenic | 30.0% | |
| GAATTTGATCAACAATGATG+GGG | + | chr6_3:94266905-94266924 | None:intergenic | 30.0% | |
| CTGAATTTGATCAACAATGA+TGG | + | chr6_3:94266907-94266926 | None:intergenic | 30.0% | |
| TTGATAAGGAAGTTATGTGA+AGG | + | chr6_3:94266959-94266978 | None:intergenic | 30.0% | |
| ! | CTCCATTTTATAGGTCTATT+TGG | - | chr6_3:94267083-94267102 | Msa0966160:intron | 30.0% |
| CTCCAAATAGACCTATAAAA+TGG | + | chr6_3:94267088-94267107 | None:intergenic | 30.0% | |
| TTTAGTACTTGTTTAGCACT+AGG | + | chr6_3:94267134-94267153 | None:intergenic | 30.0% | |
| ! | ACAACCATGTTTTCATTTGT+TGG | + | chr6_3:94267230-94267249 | None:intergenic | 30.0% |
| CATATACAAAATCTCAAGCA+TGG | + | chr6_3:94267323-94267342 | None:intergenic | 30.0% | |
| ! | CATGCTTGAGATTTTGTATA+TGG | - | chr6_3:94267321-94267340 | Msa0966160:intron | 30.0% |
| ! | GTATCTTTTGAACAATGTAG+AGG | - | chr6_3:94267379-94267398 | Msa0966160:intron | 30.0% |
| ! | GTTACAAACACTTGTTACAT+GGG | - | chr6_3:94267408-94267427 | Msa0966160:intron | 30.0% |
| GAAACACACTCTTTATCTTA+TGG | - | chr6_3:94267430-94267449 | Msa0966160:intron | 30.0% | |
| ! | TATCTTATGGCTACTGTTTT+TGG | - | chr6_3:94267443-94267462 | Msa0966160:intron | 30.0% |
| !! | ATCTTATGGCTACTGTTTTT+GGG | - | chr6_3:94267444-94267463 | Msa0966160:intron | 30.0% |
| !!! | CTTTGTTTTGTCTAATGGAT+TGG | - | chr6_3:94267486-94267505 | Msa0966160:intron | 30.0% |
| TTGCTTGTGATATAATTGAG+AGG | + | chr6_3:94267610-94267629 | None:intergenic | 30.0% | |
| TTAGGTATTCCCATTCAAAA+TGG | + | chr6_3:94267729-94267748 | None:intergenic | 30.0% | |
| TTCAACACACTTATTGTGTT+AGG | + | chr6_3:94267747-94267766 | None:intergenic | 30.0% | |
| ACACAATAAGTGTGTTGAAT+AGG | - | chr6_3:94267748-94267767 | Msa0966160:intron | 30.0% | |
| AATAAGTGTGTTGAATAGGT+AGG | - | chr6_3:94267752-94267771 | Msa0966160:intron | 30.0% | |
| !! | TTACTTTGGTTCTCAGTTTA+TGG | + | chr6_3:94268453-94268472 | None:intergenic | 30.0% |
| ! | ACCATCATGATAATTTGTAC+AGG | - | chr6_3:94268564-94268583 | Msa0966160:CDS | 30.0% |
| ACCTGTACAAATTATCATGA+TGG | + | chr6_3:94268568-94268587 | None:intergenic | 30.0% | |
| AAAGAGAGGAGAAAAAGTAA+CGG | - | chr6_3:94268664-94268683 | Msa0966160:CDS | 30.0% | |
| TTGAAGACATTGAAATTGAG+AGG | + | chr6_3:94268776-94268795 | None:intergenic | 30.0% | |
| TCCACATAACAGATATTCAT+AGG | - | chr6_3:94269247-94269266 | Msa0966160:intron | 30.0% | |
| TCCTATGAATATCTGTTATG+TGG | + | chr6_3:94269251-94269270 | None:intergenic | 30.0% | |
| TATACGGCTATTAAAAAGTG+CGG | - | chr6_3:94269272-94269291 | Msa0966160:intron | 30.0% | |
| CTTAACCTGAGTTTAAATTC+AGG | - | chr6_3:94269330-94269349 | Msa0966160:intron | 30.0% | |
| ! | GCTACATGGATTAAAATGTA+TGG | + | chr6_3:94269609-94269628 | None:intergenic | 30.0% |
| TTATCCTTCTAAACAAAACC+AGG | + | chr6_3:94269631-94269650 | None:intergenic | 30.0% | |
| !!! | GTAATTTTTTTATAGTGGCC+CGG | - | chr6_3:94269686-94269705 | Msa0966160:intron | 30.0% |
| !!! | TAATTTTTTTATAGTGGCCC+GGG | - | chr6_3:94269687-94269706 | Msa0966160:intron | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr6_3:94269727-94269746 | None:intergenic | 30.0% | |
| ! | ATTTTACTGATATCCTTTGG+TGG | - | chr6_3:94269879-94269898 | Msa0966160:intron | 30.0% |
| ! | AGAAAACTTTTATCCACCAA+AGG | + | chr6_3:94269895-94269914 | None:intergenic | 30.0% |
| AGAACATTGAGATCTGAATA+GGG | + | chr6_3:94270409-94270428 | None:intergenic | 30.0% | |
| !!! | GACATGCTTACTTTTTTTTG+AGG | + | chr6_3:94270467-94270486 | None:intergenic | 30.0% |
| TTTATCTTCTATCTTCACCA+TGG | + | chr6_3:94270698-94270717 | None:intergenic | 30.0% | |
| ATGGTGAAGATAGAAGATAA+AGG | - | chr6_3:94270697-94270716 | Msa0966160:intron | 30.0% | |
| ! | AAGGAATTGAATGGTTAGTT+TGG | + | chr6_3:94270780-94270799 | None:intergenic | 30.0% |
| AGAACAACATAGATCTAACA+TGG | + | chr6_3:94270860-94270879 | None:intergenic | 30.0% | |
| CTACGATGCCAAAAAAAAAA+AGG | - | chr6_3:94270937-94270956 | Msa0966160:intron | 30.0% | |
| TGTTGTGATTCTTATGTTGA+AGG | - | chr6_3:94271243-94271262 | Msa0966160:intron | 30.0% | |
| TAGAGCCAACAAATTGTAAT+TGG | - | chr6_3:94271404-94271423 | Msa0966160:intron | 30.0% | |
| TTCTTGTTCATAATCCTTCA+TGG | + | chr6_3:94271615-94271634 | None:intergenic | 30.0% | |
| ! | TGCTAACAAGAAAAGTTTTC+AGG | - | chr6_3:94272360-94272379 | Msa0966160:intron | 30.0% |
| !! | TGTAATCTTTGATTTGCTGT+TGG | - | chr6_3:94272813-94272832 | Msa0966160:intron | 30.0% |
| ATTAACTTCGATCTCATTCA+TGG | + | chr6_3:94272939-94272958 | None:intergenic | 30.0% | |
| !!! | AAAAATGGTGTTTTTAGTGG+CGG | - | chr6_3:94272960-94272979 | Msa0966160:CDS | 30.0% |
| GGAAATTGAAAACTATATGG+TGG | - | chr6_3:94273069-94273088 | Msa0966160:CDS | 30.0% | |
| AATTGAAAACTATATGGTGG+TGG | - | chr6_3:94273072-94273091 | Msa0966160:CDS | 30.0% | |
| ! | ATAAAGGGTTTGTTCTTAGG+AGG | + | chr6_3:94262290-94262309 | None:intergenic | 35.0% |
| TCCTAAGAACAAACCCTTTA+TGG | - | chr6_3:94262289-94262308 | Msa0966160:three_prime_UTR | 35.0% | |
| CCTAAGAACAAACCCTTTAT+GGG | - | chr6_3:94262290-94262309 | Msa0966160:three_prime_UTR | 35.0% | |
| ACCATCTTAATGTTCATAGG+TGG | - | chr6_3:94262495-94262514 | Msa0966160:three_prime_UTR | 35.0% | |
| ACCACCTATGAACATTAAGA+TGG | + | chr6_3:94262499-94262518 | None:intergenic | 35.0% | |
| ! | TGGTGAAGTTTTTACCTCAA+TGG | - | chr6_3:94262515-94262534 | Msa0966160:three_prime_UTR | 35.0% |
| ! | GAAGTTTTTACCTCAATGGT+AGG | - | chr6_3:94262519-94262538 | Msa0966160:three_prime_UTR | 35.0% |
| GTTCTGTCACTAAGGAATTA+GGG | + | chr6_3:94263016-94263035 | None:intergenic | 35.0% | |
| ATTCCTAGATTACAAAGGCA+AGG | - | chr6_3:94263137-94263156 | Msa0966160:intron | 35.0% | |
| TAACTAAACCCTCCATTGTT+GGG | + | chr6_3:94263344-94263363 | None:intergenic | 35.0% | |
| TAATATTTCAACGGTCACTG+CGG | - | chr6_3:94263549-94263568 | Msa0966160:intron | 35.0% | |
| ACTTCAACATATACATGCCA+TGG | - | chr6_3:94263586-94263605 | Msa0966160:intron | 35.0% | |
| AATACTCCAAGTCTGATAAG+TGG | - | chr6_3:94263630-94263649 | Msa0966160:intron | 35.0% | |
| TATTGTCCACTTATCAGACT+TGG | + | chr6_3:94263639-94263658 | None:intergenic | 35.0% | |
| ! | GAATTTGCTTGTTGGATGTT+TGG | + | chr6_3:94263765-94263784 | None:intergenic | 35.0% |
| ATACGTGTATGATACACTTG+TGG | + | chr6_3:94263997-94264016 | None:intergenic | 35.0% | |
| GCTTGAAATGTAAGTGATGA+GGG | + | chr6_3:94264074-94264093 | None:intergenic | 35.0% | |
| AGCTTGAAATGTAAGTGATG+AGG | + | chr6_3:94264075-94264094 | None:intergenic | 35.0% | |
| AGCATGCTAAATGAGTAATG+AGG | + | chr6_3:94264199-94264218 | None:intergenic | 35.0% | |
| AATGTTGTGATTGTGTGGAT+TGG | + | chr6_3:94264459-94264478 | None:intergenic | 35.0% | |
| GACTTGACGAATTTGTGTAT+TGG | + | chr6_3:94264494-94264513 | None:intergenic | 35.0% | |
| TGCATATATGTGTCTAGTCT+AGG | + | chr6_3:94264627-94264646 | None:intergenic | 35.0% | |
| ACTAGACACATATATGCATG+TGG | - | chr6_3:94264629-94264648 | Msa0966160:intron | 35.0% | |
| ! | GGCATCTATTGTTGTTGATT+TGG | + | chr6_3:94264657-94264676 | None:intergenic | 35.0% |
| !! | CTCTTACTTAGATGTTTTGG+TGG | + | chr6_3:94264678-94264697 | None:intergenic | 35.0% |
| GTACTCTTATATGTAAGAGG+AGG | + | chr6_3:94264705-94264724 | None:intergenic | 35.0% | |
| GGTGTACTCTTATATGTAAG+AGG | + | chr6_3:94264708-94264727 | None:intergenic | 35.0% | |
| TACATAGTTGTTGTAAGAGG+AGG | + | chr6_3:94264729-94264748 | None:intergenic | 35.0% | |
| GATGCATGGACATATAACAA+TGG | - | chr6_3:94264792-94264811 | Msa0966160:intron | 35.0% | |
| ! | CTCAATTTTTCGTCTTCTGA+AGG | - | chr6_3:94265114-94265133 | Msa0966160:intron | 35.0% |
| CAATGACTAATTTGATGCGT+TGG | - | chr6_3:94265322-94265341 | Msa0966160:intron | 35.0% | |
| TTAAAATTGTCTCTGGCGTT+TGG | + | chr6_3:94265472-94265491 | None:intergenic | 35.0% | |
| ! | TTAGTGAGGGAAATTTTGAG+AGG | - | chr6_3:94265680-94265699 | Msa0966160:intron | 35.0% |
| !! | TAGTGAGGGAAATTTTGAGA+GGG | - | chr6_3:94265681-94265700 | Msa0966160:intron | 35.0% |
| ! | TTTAGTGACGGAATTAGAGA+GGG | + | chr6_3:94265719-94265738 | None:intergenic | 35.0% |
| ! | ATTTAGTGACGGAATTAGAG+AGG | + | chr6_3:94265720-94265739 | None:intergenic | 35.0% |
| TTGGTCGCAAAATTTAGTGA+CGG | + | chr6_3:94265731-94265750 | None:intergenic | 35.0% | |
| TTAGAGAGGGAAATTAGTGA+CGG | + | chr6_3:94265780-94265799 | None:intergenic | 35.0% | |
| GTGTAACCAATAATTGGACA+CGG | - | chr6_3:94265908-94265927 | Msa0966160:intron | 35.0% | |
| TGTAACCAATAATTGGACAC+GGG | - | chr6_3:94265909-94265928 | Msa0966160:intron | 35.0% | |
| TAAAACCCGTGTCCAATTAT+TGG | + | chr6_3:94265917-94265936 | None:intergenic | 35.0% | |
| !! | TTTGCCACTCTAAAATTTGG+TGG | - | chr6_3:94266025-94266044 | Msa0966160:intron | 35.0% |
| !! | TTGCCACTCTAAAATTTGGT+GGG | - | chr6_3:94266026-94266045 | Msa0966160:intron | 35.0% |
| TACATACTCACCAAAACTCT+AGG | - | chr6_3:94266150-94266169 | Msa0966160:intron | 35.0% | |
| ACATACTCACCAAAACTCTA+GGG | - | chr6_3:94266151-94266170 | Msa0966160:intron | 35.0% | |
| ! | AGTTTGATACCCTAGAGTTT+TGG | + | chr6_3:94266163-94266182 | None:intergenic | 35.0% |
| TCAAACTAACCAGCTATAGT+AGG | - | chr6_3:94266176-94266195 | Msa0966160:intron | 35.0% | |
| !! | CCATTTTTACCTACTATAGC+TGG | + | chr6_3:94266188-94266207 | None:intergenic | 35.0% |
| CCAGCTATAGTAGGTAAAAA+TGG | - | chr6_3:94266185-94266204 | Msa0966160:intron | 35.0% | |
| AGGTAATGCTACACTTTATG+TGG | + | chr6_3:94266346-94266365 | None:intergenic | 35.0% | |
| AAAGTGTAGCATTACCTACA+CGG | - | chr6_3:94266349-94266368 | Msa0966160:intron | 35.0% | |
| ACAATCAAGATGGAGATCTT+AGG | - | chr6_3:94266447-94266466 | Msa0966160:intron | 35.0% | |
| !! | ATAATGGATTTGCTCTTAGG+AGG | + | chr6_3:94266578-94266597 | None:intergenic | 35.0% |
| !! | CACATAATGGATTTGCTCTT+AGG | + | chr6_3:94266581-94266600 | None:intergenic | 35.0% |
| GAGAAATCCAAACCCAAAAA+AGG | + | chr6_3:94266631-94266650 | None:intergenic | 35.0% | |
| ACCGTATTAATGTTCATAGG+TGG | - | chr6_3:94266786-94266805 | Msa0966160:intron | 35.0% | |
| GAAATCTTTACCTCCATGTT+AGG | - | chr6_3:94266810-94266829 | Msa0966160:CDS | 35.0% | |
| GTAGCACAAGTGAAAATTTG+AGG | - | chr6_3:94267009-94267028 | Msa0966160:intron | 35.0% | |
| GTTTCAACATTTGCAAGTTG+TGG | - | chr6_3:94267197-94267216 | Msa0966160:intron | 35.0% | |
| TCATTCCACAAGTACTTCTT+GGG | - | chr6_3:94267282-94267301 | Msa0966160:intron | 35.0% | |
| TACAAAATCTCAAGCATGGA+GGG | + | chr6_3:94267319-94267338 | None:intergenic | 35.0% | |
| ATACAAAATCTCAAGCATGG+AGG | + | chr6_3:94267320-94267339 | None:intergenic | 35.0% | |
| ! | TCTTTTGAACAATGTAGAGG+AGG | - | chr6_3:94267382-94267401 | Msa0966160:intron | 35.0% |
| ! | GGTTACAAACACTTGTTACA+TGG | - | chr6_3:94267407-94267426 | Msa0966160:intron | 35.0% |
| !! | CTAATGGATTGGAATTCAGA+AGG | - | chr6_3:94267497-94267516 | Msa0966160:intron | 35.0% |
| TGGAATTCAGAAGGTTTGAA+AGG | - | chr6_3:94267506-94267525 | Msa0966160:intron | 35.0% | |
| GGAATTCAGAAGGTTTGAAA+GGG | - | chr6_3:94267507-94267526 | Msa0966160:intron | 35.0% | |
| CGTGTCTTGAATTTATGCTT+TGG | + | chr6_3:94267568-94267587 | None:intergenic | 35.0% | |
| TGAGAGAAACTAACATCATG+AGG | + | chr6_3:94267649-94267668 | None:intergenic | 35.0% | |
| ! | TACTAGTTTGCATAACTGAG+AGG | - | chr6_3:94268732-94268751 | Msa0966160:CDS | 35.0% |
| AACTGAGAGGAAACAATTGA+AGG | - | chr6_3:94268745-94268764 | Msa0966160:CDS | 35.0% | |
| ! | ATATTGCTGTTGAAGTTGTC+AGG | - | chr6_3:94268795-94268814 | Msa0966160:intron | 35.0% |
| CTAGGTTATCTATTGAGGAA+CGG | + | chr6_3:94268896-94268915 | None:intergenic | 35.0% | |
| GTCAACTAGGTTATCTATTG+AGG | + | chr6_3:94268901-94268920 | None:intergenic | 35.0% | |
| !!! | TAATCCTAGCTGTCTTGTTT+TGG | + | chr6_3:94269546-94269565 | None:intergenic | 35.0% |
| !! | ACATTTTAATCCATGTAGCC+TGG | - | chr6_3:94269610-94269629 | Msa0966160:intron | 35.0% |
| !!! | AATTTTTTTATAGTGGCCCG+GGG | - | chr6_3:94269688-94269707 | Msa0966160:intron | 35.0% |
| TGCATAAAATATGCAAGGTC+CGG | + | chr6_3:94269722-94269741 | None:intergenic | 35.0% | |
| GATCATTGAGATTACTCTCT+TGG | + | chr6_3:94269855-94269874 | None:intergenic | 35.0% | |
| ! | AAAGTGTGGGAAAAGGTTTT+GGG | + | chr6_3:94270096-94270115 | None:intergenic | 35.0% |
| ATTAGAGAGAGAAGCTTACT+TGG | + | chr6_3:94270289-94270308 | None:intergenic | 35.0% | |
| GAGAACATTGAGATCTGAAT+AGG | + | chr6_3:94270410-94270429 | None:intergenic | 35.0% | |
| AAAGAAAGTTCACTTCTCCA+TGG | - | chr6_3:94270678-94270697 | Msa0966160:intron | 35.0% | |
| TGTTCTTATCCATGTGTTGA+AGG | - | chr6_3:94270874-94270893 | Msa0966160:intron | 35.0% | |
| TATCTTCAACCTTCAACACA+TGG | + | chr6_3:94270886-94270905 | None:intergenic | 35.0% | |
| !! | TCATGTCATATTGATTTCGC+CGG | + | chr6_3:94271296-94271315 | None:intergenic | 35.0% |
| ! | GTCATCTTCAATGATTTTGC+AGG | - | chr6_3:94272429-94272448 | Msa0966160:intron | 35.0% |
| ! | TGGAGTCAATGAATCTGTTT+TGG | + | chr6_3:94272517-94272536 | None:intergenic | 35.0% |
| ! | TGATACTAATGGTAGCCTTT+TGG | + | chr6_3:94272663-94272682 | None:intergenic | 35.0% |
| GATGAACTAGATCCAAAAGA+GGG | - | chr6_3:94272878-94272897 | Msa0966160:intron | 35.0% | |
| ! | CCCATAAAGGGTTTGTTCTT+AGG | + | chr6_3:94262293-94262312 | None:intergenic | 40.0% |
| GGTTCTGTCACTAAGGAATT+AGG | + | chr6_3:94263017-94263036 | None:intergenic | 40.0% | |
| TAGGAATAGATGCAAACCCT+TGG | + | chr6_3:94263124-94263143 | None:intergenic | 40.0% | |
| GATCCTTGCCTTTGTAATCT+AGG | + | chr6_3:94263143-94263162 | None:intergenic | 40.0% | |
| !! | CATGGCAAAGGTATTCATCT+AGG | - | chr6_3:94263308-94263327 | Msa0966160:intron | 40.0% |
| AACTAAACCCTCCATTGTTG+GGG | + | chr6_3:94263343-94263362 | None:intergenic | 40.0% | |
| GTAACTAAACCCTCCATTGT+TGG | + | chr6_3:94263345-94263364 | None:intergenic | 40.0% | |
| ! | GTAGTATCTAGGCTCTGATT+AGG | + | chr6_3:94263707-94263726 | None:intergenic | 40.0% |
| TACACTTGTGGAGATGAACT+TGG | + | chr6_3:94263985-94264004 | None:intergenic | 40.0% | |
| TTGGTGTATAGGTACATAGG+TGG | + | chr6_3:94264440-94264459 | None:intergenic | 40.0% | |
| ! | GGATTGGTGTATAGGTACAT+AGG | + | chr6_3:94264443-94264462 | None:intergenic | 40.0% |
| !! | GATTGTGTGGATTGGTGTAT+AGG | + | chr6_3:94264451-94264470 | None:intergenic | 40.0% |
| TGGTGAATGTTGTGATTGTG+TGG | + | chr6_3:94264464-94264483 | None:intergenic | 40.0% | |
| ATCTCGTTGTTGCATGTGAA+TGG | + | chr6_3:94264583-94264602 | None:intergenic | 40.0% | |
| CAACAACATGGTATGATGCA+TGG | - | chr6_3:94264778-94264797 | Msa0966160:intron | 40.0% | |
| TGAGTAAAGACTCAACGTCT+CGG | - | chr6_3:94265288-94265307 | Msa0966160:intron | 40.0% | |
| ATCAATAGCGCAGAAAGAGT+TGG | - | chr6_3:94265421-94265440 | Msa0966160:intron | 40.0% | |
| AATGCTTCTATGTCGCACAT+GGG | + | chr6_3:94265544-94265563 | None:intergenic | 40.0% | |
| TAATGCTTCTATGTCGCACA+TGG | + | chr6_3:94265545-94265564 | None:intergenic | 40.0% | |
| TTGCGACCAAAGAATTTGTG+AGG | - | chr6_3:94265741-94265760 | Msa0966160:intron | 40.0% | |
| ! | AATGGATGATGGTTCAGTAC+TGG | - | chr6_3:94266203-94266222 | Msa0966160:intron | 40.0% |
| GAAATAAAGCCCTAACATGG+AGG | + | chr6_3:94266823-94266842 | None:intergenic | 40.0% | |
| TAGCACTAGGAATCATTGCA+AGG | + | chr6_3:94267121-94267140 | None:intergenic | 40.0% | |
| CTCATTCCACAAGTACTTCT+TGG | - | chr6_3:94267281-94267300 | Msa0966160:intron | 40.0% | |
| TTGAACAATGTAGAGGAGGT+TGG | - | chr6_3:94267386-94267405 | Msa0966160:intron | 40.0% | |
| AGCATAAATTCAAGACACGC+TGG | - | chr6_3:94267569-94267588 | Msa0966160:intron | 40.0% | |
| !! | CTTTGGTTCTCAGTTTATGG+AGG | + | chr6_3:94268450-94268469 | None:intergenic | 40.0% |
| TACATGTGTCAGAGTCAACT+AGG | + | chr6_3:94268914-94268933 | None:intergenic | 40.0% | |
| GTCTTCTATTGAGTGACGAA+TGG | - | chr6_3:94269115-94269134 | Msa0966160:CDS | 40.0% | |
| TGCGTGTACGATATTCATCT+TGG | - | chr6_3:94269501-94269520 | Msa0966160:intron | 40.0% | |
| TCAACCAAAACAAGACAGCT+AGG | - | chr6_3:94269539-94269558 | Msa0966160:intron | 40.0% | |
| CTAAACAAAACCAGGCTACA+TGG | + | chr6_3:94269623-94269642 | None:intergenic | 40.0% | |
| !!! | GTAGCCTGGTTTTGTTTAGA+AGG | - | chr6_3:94269624-94269643 | Msa0966160:intron | 40.0% |
| CATAAAATATGCAAGGTCCG+GGG | + | chr6_3:94269720-94269739 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr6_3:94269721-94269740 | None:intergenic | 40.0% | |
| !! | GAAAGTGTGGGAAAAGGTTT+TGG | + | chr6_3:94270097-94270116 | None:intergenic | 40.0% |
| ! | TAGAAGAGGGAAGAAAGTGT+GGG | + | chr6_3:94270109-94270128 | None:intergenic | 40.0% |
| TTAGAAGAGGGAAGAAAGTG+TGG | + | chr6_3:94270110-94270129 | None:intergenic | 40.0% | |
| GAGAGAAGCTTACTTGGATA+TGG | + | chr6_3:94270283-94270302 | None:intergenic | 40.0% | |
| !! | TCTTTGATTTGCTGTTGGTG+TGG | - | chr6_3:94272818-94272837 | Msa0966160:intron | 40.0% |
| GGATGAACTAGATCCAAAAG+AGG | - | chr6_3:94272877-94272896 | Msa0966160:intron | 40.0% | |
| ! | TCATCATGTAAGCCCTCTTT+TGG | + | chr6_3:94272893-94272912 | None:intergenic | 40.0% |
| TCATTCATGGAGTTTAGCAG+CGG | + | chr6_3:94272926-94272945 | None:intergenic | 40.0% | |
| !! | TGAAAACTATATGGTGGTGG+AGG | - | chr6_3:94273075-94273094 | Msa0966160:CDS | 40.0% |
| TGAAACTGTGGTGGCTGAAT+CGG | + | chr6_3:94262421-94262440 | None:intergenic | 45.0% | |
| CACAGTTTCAAGCATGTCCA+CGG | - | chr6_3:94262431-94262450 | Msa0966160:three_prime_UTR | 45.0% | |
| GGTTTACTCATCCCCAACAA+TGG | - | chr6_3:94263329-94263348 | Msa0966160:intron | 45.0% | |
| TTACTCATCCCCAACAATGG+AGG | - | chr6_3:94263332-94263351 | Msa0966160:intron | 45.0% | |
| TACTCATCCCCAACAATGGA+GGG | - | chr6_3:94263333-94263352 | Msa0966160:intron | 45.0% | |
| ! | TAGGATTAGCGTCTGTGTGT+CGG | + | chr6_3:94263688-94263707 | None:intergenic | 45.0% |
| GTGTCAGTGTCGTAGTATCT+AGG | + | chr6_3:94263718-94263737 | None:intergenic | 45.0% | |
| TTGTTGGATGTTTGGACGAC+GGG | + | chr6_3:94263757-94263776 | None:intergenic | 45.0% | |
| CTTGTTGGATGTTTGGACGA+CGG | + | chr6_3:94263758-94263777 | None:intergenic | 45.0% | |
| ! | CGCTTGGTGAATTTGCTTGT+TGG | + | chr6_3:94263773-94263792 | None:intergenic | 45.0% |
| AATGTAATGCTTACCCCCAG+TGG | + | chr6_3:94263848-94263867 | None:intergenic | 45.0% | |
| TCATGTGATGCTGGTGTTCT+AGG | + | chr6_3:94264041-94264060 | None:intergenic | 45.0% | |
| ! | ATTGGACACGGGTTTTACAC+AGG | - | chr6_3:94265920-94265939 | Msa0966160:intron | 45.0% |
| !! | GTGCCCACCAAATTTTAGAG+TGG | + | chr6_3:94266032-94266051 | None:intergenic | 45.0% |
| TGAAACTGTGGTGGCTGAAA+CGG | + | chr6_3:94266712-94266731 | None:intergenic | 45.0% | |
| CACAGTTTCAAGCATGTCCA+CGG | - | chr6_3:94262431-94262450 | Msa0966160:three_prime_UTR | 45.0% | |
| AAGCATGTCCACGGTTGAAA+TGG | - | chr6_3:94262440-94262459 | Msa0966160:three_prime_UTR | 45.0% | |
| !! | GTGTTCCCAAGAAGTACTTG+TGG | + | chr6_3:94267290-94267309 | None:intergenic | 45.0% |
| ACACGCTGGAGAAACTATTG+TGG | - | chr6_3:94267583-94267602 | Msa0966160:intron | 45.0% | |
| CTCACACAAGTGCATATCCT+TGG | + | chr6_3:94267956-94267975 | None:intergenic | 45.0% | |
| !! | GATTCTCTTAGGAGCGTCAA+TGG | - | chr6_3:94268423-94268442 | Msa0966160:CDS | 45.0% |
| GGAATGAGGTATAAGGTGGA+AGG | + | chr6_3:94268592-94268611 | None:intergenic | 45.0% | |
| CAAGGGAGGAATGAGGTATA+AGG | + | chr6_3:94268599-94268618 | None:intergenic | 45.0% | |
| CTTATACCTCATTCCTCCCT+TGG | - | chr6_3:94268597-94268616 | Msa0966160:CDS | 45.0% | |
| TCATTCCTCCCTTGGAAAGA+CGG | - | chr6_3:94268605-94268624 | Msa0966160:CDS | 45.0% | |
| CTCACTGCTTTCTGACAATC+CGG | + | chr6_3:94268633-94268652 | None:intergenic | 45.0% | |
| GATTGTCAGAAAGCAGTGAG+AGG | - | chr6_3:94268633-94268652 | Msa0966160:CDS | 45.0% | |
| GAGAGGATGCAGAAAAAGAG+AGG | - | chr6_3:94268650-94268669 | Msa0966160:CDS | 45.0% | |
| GGTTATCTATTGAGGAACGG+AGG | + | chr6_3:94268893-94268912 | None:intergenic | 45.0% | |
| ! | GCTCACGAGGACTTTTTACA+CGG | - | chr6_3:94269764-94269783 | Msa0966160:intron | 45.0% |
| TGCAGCTTTGCTTGACAAGT+GGG | - | chr6_3:94270034-94270053 | Msa0966160:intron | 45.0% | |
| GCAGTTGCTGAATTGACAAG+TGG | - | chr6_3:94270056-94270075 | Msa0966160:intron | 45.0% | |
| ! | AGGGAAGAAAGTGTGGGAAA+AGG | + | chr6_3:94270103-94270122 | None:intergenic | 45.0% |
| TGAACAAACACACTCTACCG+TGG | + | chr6_3:94271448-94271467 | None:intergenic | 45.0% | |
| GTGAAAGAAGTCCTGCGATT+TGG | - | chr6_3:94272852-94272871 | Msa0966160:intron | 45.0% | |
| ! | AAAGAAGTCCTGCGATTTGG+TGG | - | chr6_3:94272855-94272874 | Msa0966160:intron | 45.0% |
| !! | AAGAAGTCCTGCGATTTGGT+GGG | - | chr6_3:94272856-94272875 | Msa0966160:intron | 45.0% |
| GGTGATACAGTGTCAGTATG+AGG | - | chr6_3:94272981-94273000 | Msa0966160:CDS | 45.0% | |
| !!! | CGGCGGCTATGGTTTTTTAA+GGG | - | chr6_3:94273128-94273147 | Msa0966160:intron | 45.0% |
| ! | GTAGATGTGGTGTGAGTTGA+AGG | - | chr6_3:94273211-94273230 | Msa0966160:intron | 45.0% |
| !! | ATATATATATAATATTTCAA+CGG | - | chr6_3:94263540-94263559 | Msa0966160:intron | 5.0% |
| !! | ATAATAATAATAATAATTAG+TGG | + | chr6_3:94267690-94267709 | None:intergenic | 5.0% |
| !!! | TTTTTTATTTTTATTTTTTG+TGG | - | chr6_3:94268401-94268420 | Msa0966160:CDS | 5.0% |
| !! | AAAAAAAATTATGAAAAATA+TGG | - | chr6_3:94268976-94268995 | Msa0966160:CDS | 5.0% |
| !! | TAAAATAAATAAAAAATATG+TGG | - | chr6_3:94273248-94273267 | Msa0966160:intron | 5.0% |
| !! | AAAATAAATAAAAAATATGT+GGG | - | chr6_3:94273249-94273268 | Msa0966160:intron | 5.0% |
| GGACATGCTTGAAACTGTGG+TGG | + | chr6_3:94262430-94262449 | None:intergenic | 50.0% | |
| CGTGGACATGCTTGAAACTG+TGG | + | chr6_3:94262433-94262452 | None:intergenic | 50.0% | |
| !! | TTAGCGTCTGTGTGTCGGTT+TGG | + | chr6_3:94263683-94263702 | None:intergenic | 50.0% |
| CTACGACACTGACACGACAA+CGG | - | chr6_3:94263723-94263742 | Msa0966160:intron | 50.0% | |
| GTCTACCCATCCATACAGAC+AGG | - | chr6_3:94263809-94263828 | Msa0966160:intron | 50.0% | |
| ACCCATCCATACAGACAGGT+AGG | - | chr6_3:94263813-94263832 | Msa0966160:intron | 50.0% | |
| GCCTACCTGTCTGTATGGAT+GGG | + | chr6_3:94263817-94263836 | None:intergenic | 50.0% | |
| CATCCATACAGACAGGTAGG+CGG | - | chr6_3:94263816-94263835 | Msa0966160:intron | 50.0% | |
| !! | GTGATGCTGGTGTTCTAGGA+GGG | + | chr6_3:94264037-94264056 | None:intergenic | 50.0% |
| ! | TGTGATGCTGGTGTTCTAGG+AGG | + | chr6_3:94264038-94264057 | None:intergenic | 50.0% |
| ! | GACACGGGTTTTACACAGGA+TGG | - | chr6_3:94265924-94265943 | Msa0966160:intron | 50.0% |
| ! | AATTTGGTGGGCACCTACGA+TGG | - | chr6_3:94266038-94266057 | Msa0966160:intron | 50.0% |
| GGACATGCTTGAAACTGTGG+TGG | + | chr6_3:94262430-94262449 | None:intergenic | 50.0% | |
| CGTGGACATGCTTGAAACTG+TGG | + | chr6_3:94262433-94262452 | None:intergenic | 50.0% | |
| GGGAGGAATGAGGTATAAGG+TGG | + | chr6_3:94268596-94268615 | None:intergenic | 50.0% | |
| GTCTTTCCAAGGGAGGAATG+AGG | + | chr6_3:94268606-94268625 | None:intergenic | 50.0% | |
| ATCCGGATCCGTCTTTCCAA+GGG | + | chr6_3:94268616-94268635 | None:intergenic | 50.0% | |
| AATCCGGATCCGTCTTTCCA+AGG | + | chr6_3:94268617-94268636 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAACTCAAC+TGG | + | chr6_3:94269754-94269773 | None:intergenic | 50.0% | |
| CCAGTTGAGTTAAGCTCACG+AGG | - | chr6_3:94269751-94269770 | Msa0966160:intron | 50.0% | |
| ! | CAGCGTGTATGTGTGCCATT+TGG | - | chr6_3:94270010-94270029 | Msa0966160:intron | 50.0% |
| CAAGCAAAGCTGCAGCCAAA+TGG | + | chr6_3:94270028-94270047 | None:intergenic | 50.0% | |
| CTGCAGCTTTGCTTGACAAG+TGG | - | chr6_3:94270033-94270052 | Msa0966160:intron | 50.0% | |
| AGTTCATCCCACCAAATCGC+AGG | + | chr6_3:94272866-94272885 | None:intergenic | 50.0% | |
| !! | ACTATATGGTGGTGGAGGTG+CGG | - | chr6_3:94273080-94273099 | Msa0966160:intron | 50.0% |
| !!! | GCGGCGGCTATGGTTTTTTA+AGG | - | chr6_3:94273127-94273146 | Msa0966160:intron | 50.0% |
| !! | AAGACCGAGTGTCGAACTCG+AGG | - | chr6_3:94262766-94262785 | Msa0966160:three_prime_UTR | 55.0% |
| CGATCCTCGAGTTCGACACT+CGG | + | chr6_3:94262773-94262792 | None:intergenic | 55.0% | |
| GCGTTGGGGATGAGTTTCAC+CGG | - | chr6_3:94262908-94262927 | Msa0966160:intron | 55.0% | |
| GTTGTGCAGGACTAGACGCT+TGG | + | chr6_3:94263789-94263808 | None:intergenic | 55.0% | |
| TGGATGGGTAGACGTTGTGC+AGG | + | chr6_3:94263802-94263821 | None:intergenic | 55.0% | |
| CGCCTACCTGTCTGTATGGA+TGG | + | chr6_3:94263818-94263837 | None:intergenic | 55.0% | |
| !! | TGCTGGTGTTCTAGGAGGGA+GGG | + | chr6_3:94264033-94264052 | None:intergenic | 55.0% |
| !! | ATGCTGGTGTTCTAGGAGGG+AGG | + | chr6_3:94264034-94264053 | None:intergenic | 55.0% |
| CTCCCTTGGAAAGACGGATC+CGG | - | chr6_3:94268611-94268630 | Msa0966160:CDS | 55.0% | |
| ! | GCTCCTTCTCCTTCTGGTTG+CGG | + | chr6_3:94273109-94273128 | None:intergenic | 55.0% |
| GCAACCAGAAGGAGAAGGAG+CGG | - | chr6_3:94273108-94273127 | Msa0966160:intron | 55.0% | |
| CGACCGCCTACCTGTCTGTA+TGG | + | chr6_3:94263822-94263841 | None:intergenic | 60.0% | |
| AGGTAGGCGGTCGAAACCAC+TGG | - | chr6_3:94263829-94263848 | Msa0966160:intron | 60.0% | |
| GGTAGGCGGTCGAAACCACT+GGG | - | chr6_3:94263830-94263849 | Msa0966160:intron | 60.0% | |
| GTAGGCGGTCGAAACCACTG+GGG | - | chr6_3:94263831-94263850 | Msa0966160:intron | 60.0% | |
| TAGGCGGTCGAAACCACTGG+GGG | - | chr6_3:94263832-94263851 | Msa0966160:intron | 60.0% | |
| CGGATCCGTCTTTCCAAGGG+AGG | + | chr6_3:94268613-94268632 | None:intergenic | 60.0% | |
| AAGGTCCGGGGTTCAAACCC+CGG | + | chr6_3:94269708-94269727 | None:intergenic | 60.0% | |
| CTGCACCACAAGGCGACATC+TGG | - | chr6_3:94269987-94270006 | Msa0966160:intron | 60.0% | |
| ! | CCTTCTCCTTCTGGTTGCGG+TGG | + | chr6_3:94273106-94273125 | None:intergenic | 60.0% |
| CCACCGCAACCAGAAGGAGA+AGG | - | chr6_3:94273103-94273122 | Msa0966160:intron | 60.0% | |
| ACCAGAAGGAGAAGGAGCGG+CGG | - | chr6_3:94273111-94273130 | Msa0966160:intron | 60.0% | |
| AGGTCCGGGGTTCAAACCCC+GGG | + | chr6_3:94269707-94269726 | None:intergenic | 65.0% | |
| GGAGTGCACGCTGCACCACA+AGG | - | chr6_3:94269977-94269996 | Msa0966160:intron | 65.0% | |
| CGCTGCCAGATGTCGCCTTG+TGG | + | chr6_3:94269995-94270014 | None:intergenic | 65.0% | |
| AGGAGAAGGAGCGGCGGCTA+TGG | - | chr6_3:94273117-94273136 | Msa0966160:intron | 65.0% | |
| GTGGCCCGGGGTTTGAACCC+CGG | - | chr6_3:94269700-94269719 | Msa0966160:intron | 70.0% | |
| GTGCGGCCACCGCAACCAGA+AGG | - | chr6_3:94273097-94273116 | Msa0966160:intron | 70.0% | |
| GCCGCCGCTCCTTCTCCTTC+TGG | + | chr6_3:94273115-94273134 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 94262168 | 94273442 | 94262168 | ID=Msa0966160;Name=Msa0966160 |
| chr6_3 | mRNA | 94262168 | 94273442 | 94262168 | ID=Msa0966160-mRNA-1;Parent=Msa0966160;Name=Msa0966160-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.23|0.28|1|0.07|0.07|14|770|521 |
| chr6_3 | exon | 94262168 | 94262800 | 94262168 | ID=Msa0966160-mRNA-1:exon:17373;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94264284 | 94264375 | 94264284 | ID=Msa0966160-mRNA-1:exon:17372;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94264470 | 94264529 | 94264470 | ID=Msa0966160-mRNA-1:exon:17371;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94264841 | 94264846 | 94264841 | ID=Msa0966160-mRNA-1:exon:17370;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94264911 | 94264938 | 94264911 | ID=Msa0966160-mRNA-1:exon:17369;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94266794 | 94267024 | 94266794 | ID=Msa0966160-mRNA-1:exon:17368;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94267956 | 94268091 | 94267956 | ID=Msa0966160-mRNA-1:exon:17367;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94268129 | 94268231 | 94268129 | ID=Msa0966160-mRNA-1:exon:17366;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94268267 | 94268514 | 94268267 | ID=Msa0966160-mRNA-1:exon:17365;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94268557 | 94268805 | 94268557 | ID=Msa0966160-mRNA-1:exon:17364;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94268867 | 94268916 | 94268867 | ID=Msa0966160-mRNA-1:exon:17363;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94268973 | 94269154 | 94268973 | ID=Msa0966160-mRNA-1:exon:17362;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94272960 | 94273096 | 94272960 | ID=Msa0966160-mRNA-1:exon:17361;Parent=Msa0966160-mRNA-1 |
| chr6_3 | exon | 94273262 | 94273442 | 94273262 | ID=Msa0966160-mRNA-1:exon:17360;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94273262 | 94273442 | 94273262 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94272960 | 94273096 | 94272960 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94268973 | 94269154 | 94268973 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94268867 | 94268916 | 94268867 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94268557 | 94268805 | 94268557 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94268267 | 94268514 | 94268267 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94268129 | 94268231 | 94268129 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94267956 | 94268091 | 94267956 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94266794 | 94267024 | 94266794 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94264911 | 94264938 | 94264911 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94264841 | 94264846 | 94264841 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | CDS | 94264515 | 94264529 | 94264515 | ID=Msa0966160-mRNA-1:cds;Parent=Msa0966160-mRNA-1 |
| chr6_3 | three_prime_UTR | 94264470 | 94264514 | 94264470 | ID=Msa0966160-mRNA-1:three_prime_utr;Parent=Msa0966160-mRNA-1 |
| chr6_3 | three_prime_UTR | 94264284 | 94264375 | 94264284 | ID=Msa0966160-mRNA-1:three_prime_utr;Parent=Msa0966160-mRNA-1 |
| chr6_3 | three_prime_UTR | 94262168 | 94262800 | 94262168 | ID=Msa0966160-mRNA-1:three_prime_utr;Parent=Msa0966160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
