AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0968340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968340 MtrunA17_Chr7g0263771 92.105 608 29 3 1 600 1 597 0.0 1121
Msa0968340 MtrunA17_Chr7g0270131 33.886 422 263 9 106 518 207 621 2.05e-62 220
Msa0968340 MtrunA17_Chr3g0121351 30.263 456 273 10 81 507 98 537 2.62e-62 216
Msa0968340 MtrunA17_Chr4g0076491 31.954 435 261 11 106 513 262 688 3.53e-55 199
Msa0968340 MtrunA17_Chr1g0176041 29.844 449 271 9 85 505 111 543 3.88e-55 197
Msa0968340 MtrunA17_Chr6g0449741 30.924 498 282 15 45 513 184 648 6.21e-55 197
Msa0968340 MtrunA17_Chr2g0330401 30.879 421 243 11 111 507 77 473 6.09e-54 191
Msa0968340 MtrunA17_Chr4g0063551 30.942 446 257 10 117 522 127 561 1.39e-53 194
Msa0968340 MtrunA17_Chr6g0449911 32.339 436 263 15 88 507 122 541 2.59e-52 191
Msa0968340 MtrunA17_Chr3g0107851 30.569 422 256 12 96 494 82 489 3.83e-51 185
Msa0968340 MtrunA17_Chr1g0200181 32.009 428 238 13 110 507 125 529 1.27e-50 184
Msa0968340 MtrunA17_Chr1g0157691 30.913 427 244 11 110 507 127 531 4.63e-50 182
Msa0968340 MtrunA17_Chr4g0040761 33.065 372 208 9 121 486 37 373 1.31e-47 178
Msa0968340 MtrunA17_Chr2g0277821 30.896 424 273 9 95 507 469 883 2.27e-47 179
Msa0968340 MtrunA17_Chr2g0293631 31.347 386 238 11 110 482 476 847 3.04e-46 176
Msa0968340 MtrunA17_Chr2g0297261 32.070 343 225 4 169 507 67 405 4.87e-46 167
Msa0968340 MtrunA17_Chr6g0461751 27.739 429 279 11 110 518 121 538 7.87e-42 158
Msa0968340 MtrunA17_Chr1g0149251 33.230 322 201 9 179 491 7 323 1.82e-40 150
Msa0968340 MtrunA17_Chr7g0271121 31.214 346 220 8 165 499 135 473 1.13e-39 155
Msa0968340 MtrunA17_Chr3g0098121 28.133 391 228 10 118 495 167 517 1.16e-39 155
Msa0968340 MtrunA17_Chr3g0095031 31.373 357 220 13 165 506 119 465 1.65e-39 152
Msa0968340 MtrunA17_Chr2g0300291 28.238 386 229 9 121 495 159 507 4.16e-39 153
Msa0968340 MtrunA17_Chr5g0409981 30.709 381 244 9 173 537 139 515 7.85e-39 150
Msa0968340 MtrunA17_Chr1g0193491 29.674 337 221 8 155 479 133 465 8.99e-39 151
Msa0968340 MtrunA17_Chr4g0003441 33.010 309 194 8 179 479 151 454 3.23e-38 147
Msa0968340 MtrunA17_Chr4g0070981 30.205 341 214 6 179 507 84 412 5.41e-38 145
Msa0968340 MtrunA17_Chr2g0329931 30.000 340 216 5 179 507 84 412 1.06e-37 144
Msa0968340 MtrunA17_Chr2g0299681 30.205 341 214 6 179 507 84 412 1.94e-37 144
Msa0968340 MtrunA17_Chr8g0342861 28.916 332 230 4 179 507 84 412 3.13e-36 140
Msa0968340 MtrunA17_Chr5g0443991 28.541 473 274 16 166 591 106 561 3.03e-35 141
Msa0968340 MtrunA17_Chr2g0310581 28.446 341 233 7 161 493 78 415 3.77e-35 139
Msa0968340 MtrunA17_Chr5g0442191 27.089 347 238 9 165 501 110 451 8.47e-35 139
Msa0968340 MtrunA17_Chr7g0247191 29.167 336 230 6 174 506 188 518 2.22e-34 137
Msa0968340 MtrunA17_Chr7g0236841 30.205 341 218 9 173 502 47 378 2.71e-34 135
Msa0968340 MtrunA17_Chr6g0475251 30.159 315 201 6 179 478 146 456 3.10e-34 138
Msa0968340 MtrunA17_Chr6g0483491 30.205 341 218 9 173 502 47 378 6.90e-34 134
Msa0968340 MtrunA17_Chr3g0114081 31.176 340 201 10 179 487 59 396 1.10e-33 135
Msa0968340 MtrunA17_Chr7g0247221 28.358 335 234 5 174 506 181 511 1.64e-33 134
Msa0968340 MtrunA17_Chr7g0247181 28.358 335 234 5 174 506 178 508 2.52e-33 134
Msa0968340 MtrunA17_Chr4g0034411 27.542 472 280 15 166 591 106 561 1.44e-32 133
Msa0968340 MtrunA17_Chr4g0058591 28.000 350 208 12 111 438 183 510 9.92e-32 129
Msa0968340 MtrunA17_Chr1g0204391 30.973 339 183 13 179 478 87 413 2.53e-31 128
Msa0968340 MtrunA17_Chr4g0062301 29.129 333 218 11 169 487 130 458 8.45e-31 127
Msa0968340 MtrunA17_Chr2g0307471 27.660 376 254 10 124 487 82 451 1.93e-30 125
Msa0968340 MtrunA17_Chr8g0347151 30.563 373 216 12 149 492 218 576 3.08e-30 125
Msa0968340 MtrunA17_Chr8g0347161 27.235 481 288 18 56 492 15 477 3.68e-29 122
Msa0968340 MtrunA17_Chr1g0179761 29.464 336 207 9 173 481 120 452 8.43e-28 117
Msa0968340 MtrunA17_Chr8g0347171 25.690 471 304 13 56 492 77 535 1.10e-27 118
Msa0968340 MtrunA17_Chr7g0236831 25.740 439 215 13 117 479 177 580 5.02e-27 116
Msa0968340 MtrunA17_Chr1g0192021 27.764 407 233 12 161 512 51 451 2.97e-26 113
Msa0968340 MtrunA17_Chr8g0386451 27.346 373 230 11 148 492 304 663 3.99e-26 113
Msa0968340 MtrunA17_Chr3g0145781 26.404 356 225 12 169 489 165 518 4.31e-26 112
Msa0968340 MtrunA17_Chr6g0466611 25.862 348 233 10 156 482 165 508 1.08e-25 112
Msa0968340 MtrunA17_Chr3g0137901 47.368 114 59 1 377 489 44 157 1.30e-25 103
Msa0968340 MtrunA17_Chr4g0029191 24.069 403 220 11 169 489 78 476 1.54e-24 108
Msa0968340 MtrunA17_Chr2g0301281 23.325 403 223 11 169 489 75 473 2.36e-24 107
Msa0968340 MtrunA17_Chr8g0342851 26.727 333 208 8 180 507 17 318 5.19e-23 100
Msa0968340 MtrunA17_Chr4g0004301 25.587 383 208 13 172 483 69 445 1.11e-22 101
Msa0968340 MtrunA17_Chr5g0434301 25.587 383 208 13 172 483 69 445 1.20e-22 101
Msa0968340 MtrunA17_Chr2g0309551 23.896 385 224 7 169 489 142 521 1.36e-21 99.0
Msa0968340 MtrunA17_Chr4g0025141 32.258 186 106 5 313 481 18 200 2.67e-18 84.7
Msa0968340 MtrunA17_Chr4g0074521 26.648 364 201 17 155 467 93 441 1.19e-17 86.3
Msa0968340 MtrunA17_Chr1g0169331 27.586 261 178 6 255 507 140 397 1.26e-17 85.5
Msa0968340 MtrunA17_Chr8g0354761 20.561 321 242 5 177 486 49 367 1.61e-16 82.4
Msa0968340 MtrunA17_Chr4g0058601 43.478 69 39 0 439 507 9 77 7.55e-14 68.6
Msa0968340 MtrunA17_Chr5g0429221 28.438 320 198 11 174 477 42 346 9.15e-14 73.6
Msa0968340 MtrunA17_Chr4g0025101 34.513 113 59 2 409 506 90 202 1.49e-12 67.4
Msa0968340 MtrunA17_Chr8g0377041 23.481 362 236 12 166 507 285 625 5.73e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968340 AT3G09720.2 62.613 551 178 7 1 535 1 539 0.0 654
Msa0968340 AT3G09720.1 62.613 551 178 7 1 535 1 539 0.0 654
Msa0968340 AT2G47330.1 33.254 418 254 8 111 515 210 615 1.60e-62 220
Msa0968340 AT5G63120.2 31.829 421 243 10 109 507 145 543 3.42e-58 205
Msa0968340 AT2G33730.1 31.957 460 266 12 106 536 289 730 1.11e-56 204
Msa0968340 AT3G58510.1 30.493 446 264 11 88 505 112 539 2.51e-56 201
Msa0968340 AT3G58510.3 30.493 446 264 11 88 505 112 539 2.51e-56 201
Msa0968340 AT3G58510.2 30.493 446 264 11 88 505 112 539 2.51e-56 201
Msa0968340 AT3G58570.1 32.374 417 240 10 117 505 134 536 1.04e-55 199
Msa0968340 AT2G42520.2 30.201 447 264 10 89 505 121 549 1.43e-55 199
Msa0968340 AT2G42520.1 30.201 447 264 10 89 505 121 549 1.43e-55 199
Msa0968340 AT2G42520.3 30.201 447 264 10 89 505 121 549 1.43e-55 199
Msa0968340 AT1G55150.1 30.825 412 241 10 111 500 81 470 4.25e-55 195
Msa0968340 AT1G55150.2 30.825 412 241 10 111 500 106 495 3.03e-54 193
Msa0968340 AT5G14610.6 30.649 447 278 13 77 507 108 538 5.28e-51 186
Msa0968340 AT5G14610.2 30.649 447 278 13 77 507 108 538 5.41e-51 186
Msa0968340 AT3G01540.4 30.073 409 261 10 111 507 140 535 7.22e-51 186
Msa0968340 AT3G01540.2 30.073 409 261 10 111 507 140 535 7.22e-51 186
Msa0968340 AT3G01540.3 30.073 409 261 10 111 507 140 535 7.22e-51 186
Msa0968340 AT5G51280.1 31.567 434 259 12 95 507 115 531 7.56e-51 185
Msa0968340 AT3G01540.1 30.073 409 261 10 111 507 140 535 8.18e-51 186
Msa0968340 AT5G14610.5 30.649 447 278 13 77 507 116 546 8.57e-51 186
Msa0968340 AT3G06480.1 30.993 413 258 11 110 509 416 814 1.11e-49 186
Msa0968340 AT1G77030.1 33.422 377 206 10 121 489 47 386 1.97e-49 184
Msa0968340 AT4G33370.1 30.233 430 270 11 95 507 66 482 1.92e-48 177
Msa0968340 AT1G20920.4 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa0968340 AT1G20920.6 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa0968340 AT1G20920.3 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa0968340 AT1G20920.7 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa0968340 AT1G20920.5 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa0968340 AT1G20920.1 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa0968340 AT1G20920.2 31.373 408 260 9 111 507 173 571 2.51e-47 178
Msa0968340 AT5G14610.7 29.594 419 238 14 104 507 31 407 2.15e-46 171
Msa0968340 AT5G14610.3 29.594 419 238 14 104 507 31 407 2.15e-46 171
Msa0968340 AT5G14610.1 29.630 405 229 13 117 507 244 606 3.73e-45 171
Msa0968340 AT3G19760.1 29.912 341 235 3 169 507 69 407 1.44e-43 161
Msa0968340 AT1G28180.1 32.416 327 193 9 173 482 11 326 5.67e-41 153
Msa0968340 AT3G09620.2 29.454 421 226 13 104 501 370 742 2.47e-40 158
Msa0968340 AT3G09620.1 29.454 421 226 13 104 501 369 741 2.51e-40 158
Msa0968340 AT1G51380.1 29.825 342 236 3 166 505 53 392 6.76e-40 150
Msa0968340 AT5G11170.2 32.573 307 194 8 179 477 7 308 8.94e-39 146
Msa0968340 AT1G31970.1 31.234 381 243 9 173 537 152 529 1.20e-38 150
Msa0968340 AT5G26742.1 31.373 357 205 12 165 498 132 471 1.43e-38 152
Msa0968340 AT5G26742.2 31.373 357 205 12 165 498 132 471 1.44e-38 152
Msa0968340 AT5G26742.3 31.285 358 206 12 165 499 39 379 1.91e-38 150
Msa0968340 AT3G02065.3 26.353 425 286 10 110 518 89 502 3.65e-38 148
Msa0968340 AT3G02065.2 26.353 425 286 10 110 518 89 502 3.65e-38 148
Msa0968340 AT5G11170.1 32.573 307 194 8 179 477 90 391 4.94e-38 146
Msa0968340 AT5G11200.1 32.573 307 194 8 179 477 90 391 4.94e-38 146
Msa0968340 AT3G13920.4 27.751 418 258 9 102 507 21 406 1.88e-37 144
Msa0968340 AT3G02065.1 27.095 358 246 6 173 518 11 365 3.63e-37 142
Msa0968340 AT3G53110.1 29.545 352 228 8 173 506 132 481 5.59e-37 144
Msa0968340 AT3G22330.1 28.650 363 222 11 165 506 134 480 7.49e-37 145
Msa0968340 AT1G54270.2 27.949 390 248 7 129 507 39 406 1.32e-36 141
Msa0968340 AT3G13920.1 29.706 340 217 5 179 507 83 411 1.51e-36 141
Msa0968340 AT3G13920.3 29.003 331 231 3 179 507 73 401 1.82e-36 141
Msa0968340 AT4G16630.1 29.429 333 221 8 173 495 205 533 2.50e-36 145
Msa0968340 AT1G54270.1 28.701 331 232 3 179 507 83 411 3.85e-36 140
Msa0968340 AT3G22310.2 28.011 357 232 9 165 506 146 492 4.20e-36 143
Msa0968340 AT3G22310.1 28.011 357 232 9 165 506 146 492 4.78e-36 143
Msa0968340 AT1G72730.1 29.326 341 217 6 179 507 85 413 7.74e-36 139
Msa0968340 AT1G16280.1 29.762 336 221 8 164 489 87 417 1.52e-35 140
Msa0968340 AT3G18600.1 28.097 331 227 7 166 487 120 448 2.58e-35 140
Msa0968340 AT3G13920.5 29.739 306 211 3 179 482 87 390 2.64e-35 138
Msa0968340 AT3G13920.2 29.739 306 211 3 179 482 83 386 2.96e-35 138
Msa0968340 AT4G00660.1 30.794 315 212 5 170 482 166 476 7.83e-35 138
Msa0968340 AT4G00660.2 30.794 315 212 5 170 482 166 476 7.83e-35 138
Msa0968340 AT5G11200.3 29.855 345 194 8 179 477 90 432 1.09e-34 137
Msa0968340 AT5G63120.3 28.969 359 209 11 109 445 145 479 4.42e-34 135
Msa0968340 AT5G63120.4 28.969 359 209 11 109 445 145 479 4.42e-34 135
Msa0968340 AT5G63120.5 28.969 359 209 11 109 445 145 479 4.42e-34 135
Msa0968340 AT5G63120.1 28.852 357 210 10 109 443 145 479 4.46e-34 135
Msa0968340 AT5G14610.4 29.383 405 249 15 77 465 116 499 3.08e-33 134
Msa0968340 AT5G54910.1 32.710 321 196 11 173 479 109 423 7.72e-33 134
Msa0968340 AT5G60990.1 28.242 347 227 8 173 502 47 388 2.78e-32 130
Msa0968340 AT2G45810.1 29.808 312 211 6 174 482 193 499 9.70e-32 129
Msa0968340 AT3G61240.2 29.073 313 212 7 174 482 163 469 6.41e-31 127
Msa0968340 AT3G61240.1 29.073 313 212 7 174 482 163 469 6.41e-31 127
Msa0968340 AT3G06480.2 29.345 351 221 11 110 447 416 752 7.41e-31 129
Msa0968340 AT5G05450.1 32.647 340 193 11 179 487 60 394 1.17e-30 127
Msa0968340 AT2G40700.1 26.959 434 207 13 169 511 65 479 1.32e-30 127
Msa0968340 AT5G65900.1 28.228 333 219 10 169 487 188 514 9.85e-30 124
Msa0968340 AT5G62190.1 30.312 320 194 10 179 478 140 450 6.70e-29 122
Msa0968340 AT1G71370.1 29.121 364 221 12 155 487 28 385 8.33e-29 121
Msa0968340 AT5G63630.1 29.268 369 226 13 149 492 72 430 5.09e-27 115
Msa0968340 AT5G63630.2 29.301 372 222 12 149 492 266 624 6.36e-27 116
Msa0968340 AT5G08610.1 26.870 361 231 9 158 492 405 758 1.72e-26 115
Msa0968340 AT3G06980.1 26.316 361 218 13 169 489 408 760 1.91e-26 115
Msa0968340 AT5G08620.1 27.147 361 230 9 158 492 103 456 4.96e-26 112
Msa0968340 AT1G63250.1 28.125 352 223 10 166 492 359 705 7.22e-26 113
Msa0968340 AT4G09730.1 26.050 357 221 12 156 482 136 479 1.49e-25 112
Msa0968340 AT2G07750.1 28.286 350 225 11 166 492 406 752 1.42e-24 109
Msa0968340 AT4G15850.1 24.747 396 219 11 172 497 72 458 7.70e-24 105
Msa0968340 AT5G11200.2 49.505 101 51 0 377 477 350 450 7.68e-23 102
Msa0968340 AT4G34910.1 26.526 426 240 14 129 495 46 457 6.43e-22 100
Msa0968340 AT1G12770.2 26.158 367 201 9 181 483 156 516 2.48e-21 98.6
Msa0968340 AT1G12770.1 26.158 367 201 9 181 483 156 516 2.48e-21 98.6
Msa0968340 AT5G19210.2 27.003 337 202 13 166 467 107 434 6.23e-19 90.5
Msa0968340 AT3G16840.1 38.000 100 62 0 378 477 506 605 3.69e-15 79.7
Msa0968340 AT3G16840.2 38.000 100 62 0 378 477 507 606 3.82e-15 79.7
Msa0968340 AT5G19210.1 26.667 240 141 10 255 467 46 277 6.11e-12 67.4
Msa0968340 AT5G19210.3 26.667 240 141 10 255 467 46 277 6.11e-12 67.4
Msa0968340 AT1G51380.2 24.779 226 166 3 166 389 53 276 6.60e-11 63.9
Msa0968340 AT1G59990.2 29.545 176 117 3 313 482 357 531 7.53e-11 65.5
Msa0968340 AT1G59990.1 29.545 176 117 3 313 482 357 531 7.95e-11 65.5

Find 155 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATAAATCAGACATTTA+AGG 0.227008 6_3:-98677555 None:intergenic
TATATCATGGTTTAAGCTTC+TGG 0.227067 6_3:-98677416 None:intergenic
TGGGAATCACTTCAGGAATA+TGG 0.232031 6_3:+98675439 Msa0968340:intron
GGTTGAGATCGAATCACTTT+TGG 0.256333 6_3:-98677111 None:intergenic
GGTTGAGATTGAATCACTTT+TGG 0.259344 6_3:-98677015 None:intergenic
GGCTATTCCGGTACTCTTAC+AGG 0.289330 6_3:+98673746 Msa0968340:CDS
TTTAAGCTTCTGGAAGTATT+AGG 0.291904 6_3:-98677406 None:intergenic
TTGTTCTTTCTTCAGCCTAA+TGG 0.302605 6_3:-98673317 None:intergenic
TTTGGCTATCAAGAGGAAAA+AGG 0.315999 6_3:+98674261 Msa0968340:CDS
CGCCGATATTGCACGCTTCC+AGG 0.317355 6_3:+98672854 Msa0968340:CDS
TTTATAAATCAGACATTTAA+GGG 0.327898 6_3:-98677554 None:intergenic
TGTTTAGATAGAATCTCTTT+TGG 0.331538 6_3:-98677207 None:intergenic
GGTGTTAGGCCTAACAAATC+TGG 0.332763 6_3:+98672645 None:intergenic
GCTTGTGCCCCAACTGGCTC+TGG 0.345576 6_3:+98673918 Msa0968340:CDS
AATCTTCGCCAAACTGTTAT+CGG 0.349062 6_3:-98673029 None:intergenic
TGTCATAGCCGTGAATTATC+TGG 0.356260 6_3:+98674100 Msa0968340:CDS
CTTTGGAGAAAGACCAATAC+TGG 0.359443 6_3:-98675904 None:intergenic
CACGCCACTTCGATTATGTT+TGG 0.360066 6_3:+98674243 Msa0968340:CDS
TACCTGGAAGCGTGCAATAT+CGG 0.365628 6_3:-98672856 None:intergenic
CTTCTTCTGCAACTTCGGTT+TGG 0.369457 6_3:-98677036 None:intergenic
CTTCTTCTGCAACTTCGGTT+TGG 0.369457 6_3:-98677132 None:intergenic
CCAAGTGGTCTCTTATTAAA+CGG 0.369668 6_3:+98677487 Msa0968340:three_prime_UTR
TAAAATGTAAGAGAAATAAT+TGG 0.370634 6_3:-98677699 None:intergenic
AAGCGCAAGAAAACCTCTTC+TGG 0.373554 6_3:+98673115 Msa0968340:CDS
TTCAACTTCTTCTGCAACTT+CGG 0.380856 6_3:-98677041 None:intergenic
TTCAACTTCTTCTGCAACTT+CGG 0.380856 6_3:-98677137 None:intergenic
TGTTGACAGTAAACCCGTTC+GGG 0.381859 6_3:-98672678 None:intergenic
TGGGTTATTGTGACCCGAAC+GGG 0.393459 6_3:+98672665 Msa0968340:five_prime_UTR
CTGCAACCGTACTATCAATA+TGG 0.393516 6_3:+98672776 Msa0968340:exon
ATACACTACATAAATCATAA+TGG 0.399100 6_3:-98677675 None:intergenic
TGCCACTGACGTGGTTGCTC+GGG 0.403642 6_3:+98676539 Msa0968340:CDS
CACAATAACCCAGATTTGTT+AGG 0.408461 6_3:-98672654 None:intergenic
CTGTTGACAGTAAACCCGTT+CGG 0.409236 6_3:-98672679 None:intergenic
TACACTACATAAATCATAAT+GGG 0.410874 6_3:-98677674 None:intergenic
ATATATGCTGATGCAGAATC+TGG 0.416570 6_3:-98676606 None:intergenic
AAAAGATACCGATAACAGTT+TGG 0.419073 6_3:+98673021 Msa0968340:CDS
GCTCGATCTTCAACAAAATC+AGG 0.420958 6_3:-98675275 None:intergenic
TTGGCCTTCTTCGTTTGACT+TGG 0.421646 6_3:-98673275 None:intergenic
GCGGAATGTATCTAATCTAA+TGG 0.429818 6_3:+98676881 Msa0968340:CDS
TCAGCATATATCCACAGAAT+TGG 0.430225 6_3:+98676618 Msa0968340:CDS
AAGTATTAGGCAACATTGCC+TGG 0.432193 6_3:-98677393 None:intergenic
CAGGCTGTGAAGTTCCATCT+TGG 0.434891 6_3:+98676910 Msa0968340:CDS
GAGCGCGCCAAGGAGCTGTA+TGG 0.436091 6_3:+98675931 Msa0968340:CDS
TTGTCACAGGCTTATAGATC+CGG 0.437316 6_3:-98677232 None:intergenic
CATTTCGATAGAAAGAAATT+CGG 0.439042 6_3:+98672831 Msa0968340:CDS
AAGGAAAACTTCTCGCAATT+CGG 0.440671 6_3:+98675507 Msa0968340:CDS
GTCCCATTCTCTGTTGTCAC+AGG 0.444984 6_3:-98677245 None:intergenic
CAAGTGGTCTCTTATTAAAC+GGG 0.454110 6_3:+98677488 Msa0968340:three_prime_UTR
TGACGTGGTTGCTCGGGGAA+TGG 0.461021 6_3:+98676545 Msa0968340:CDS
ATAGGTCGTTCTGGCAGAGC+AGG 0.461719 6_3:+98676807 Msa0968340:intron
TGGGGATGGCACATTGTAAC+CGG 0.462627 6_3:-98673505 None:intergenic
AATCCAACAGCAGGCTATTC+CGG 0.467878 6_3:+98673734 Msa0968340:CDS
ATGATAATGATGAGTCCATT+AGG 0.468307 6_3:+98673302 Msa0968340:CDS
GGCAACTGGCATGAAGGTAC+TGG 0.470116 6_3:-98677446 None:intergenic
TTCCGGTACTCTTACAGGTA+TGG 0.473752 6_3:+98673751 Msa0968340:CDS
AAGCCTGTGACAACAGAGAA+TGG 0.475748 6_3:+98677242 Msa0968340:three_prime_UTR
TCTACAATGAGGGTGGCAAC+TGG 0.480328 6_3:-98677460 None:intergenic
TACCTTGAGCTTCATGAGCA+TGG 0.484347 6_3:-98673964 None:intergenic
CTTTCTATCGAAATGAATAC+CGG 0.484435 6_3:-98672823 None:intergenic
AAAAGAGAGCGTATTATTGA+GGG 0.484779 6_3:-98675239 None:intergenic
TTGCCACTGACGTGGTTGCT+CGG 0.486481 6_3:+98676538 Msa0968340:CDS
ATGTTTGACCAGATAATTCA+CGG 0.486895 6_3:-98674108 None:intergenic
TACTGGATATGATTATATCA+TGG 0.487584 6_3:-98677429 None:intergenic
GCCTGCTGTTGGATTGGTGT+TGG 0.489600 6_3:-98673726 None:intergenic
CCGTTTAATAAGAGACCACT+TGG 0.490288 6_3:-98677487 None:intergenic
GCTTTCTTCATCTTCTGTCA+CGG 0.491976 6_3:-98673056 None:intergenic
TGAAGTTCCATCTTGGTTGA+CGG 0.493312 6_3:+98676917 Msa0968340:CDS
GAGATTCTATCTAAACAAAC+CGG 0.500347 6_3:+98677213 Msa0968340:exon
TGCAGTTGCAGAAGAAGAAG+TGG 0.501233 6_3:+98676943 Msa0968340:CDS
TTCTTCGTTTGACTTGGATG+TGG 0.502330 6_3:-98673269 None:intergenic
AATCATAACATTCATGTCTC+CGG 0.506996 6_3:+98673486 Msa0968340:CDS
ACCTTGAGCTTCATGAGCAT+GGG 0.507753 6_3:-98673963 None:intergenic
GCGTCGAAGGGAAAGTGCTC+AGG 0.511958 6_3:+98672726 Msa0968340:five_prime_UTR
AGATTCTATCGTAACCAAAC+CGG 0.516142 6_3:+98677082 Msa0968340:CDS
AGATTCTATCGTAACCAAAC+CGG 0.516142 6_3:+98677178 Msa0968340:CDS
AGATTCTATCTCAACCAAAC+CGG 0.517381 6_3:+98676986 Msa0968340:CDS
TTCTGATTTGTCTCAAGAAG+AGG 0.518272 6_3:+98675993 Msa0968340:CDS
AGCCTGTGACAACAGAGAAT+GGG 0.521349 6_3:+98677243 Msa0968340:three_prime_UTR
AGACTGAGTGGCAAGTGTCC+AGG 0.524908 6_3:+98677375 Msa0968340:three_prime_UTR
TGAATAAAAGAAGCTGTTGA+CGG 0.525694 6_3:+98673226 Msa0968340:intron
CTTCTTGAGACAAATCAGAA+TGG 0.526964 6_3:-98675990 None:intergenic
CGCTCGCCATATTGATAGTA+CGG 0.527691 6_3:-98672782 None:intergenic
GTAGAAGTGAGAAGCGTCGA+AGG 0.529783 6_3:+98672713 Msa0968340:five_prime_UTR
GTTGAGATAGAATCTCTCTC+AGG 0.530892 6_3:-98676978 None:intergenic
AACTCATCAAAGCTTTGAAG+TGG 0.536342 6_3:-98673525 None:intergenic
CTTACAGGTATGGATTGCAT+TGG 0.538662 6_3:+98673761 Msa0968340:CDS
TCAATCTGCTTGAACAATTG+TGG 0.538744 6_3:-98675191 None:intergenic
GTACCGGAATAGCCTGCTGT+TGG 0.541486 6_3:-98673737 None:intergenic
TTGACTTGGATGTGGAACTT+CGG 0.542071 6_3:-98673261 None:intergenic
TTAGATACATTCCGCAGGAA+TGG 0.543864 6_3:-98676873 None:intergenic
ACCAACACCAATCCAACAGC+AGG 0.544241 6_3:+98673725 Msa0968340:CDS
ACATCCAAGTCAAACGAAGA+AGG 0.545796 6_3:+98673271 Msa0968340:CDS
TGCAACTCCGTCAACCAAGA+TGG 0.545864 6_3:-98676924 None:intergenic
TCTAATCTAATGGCATCCTC+AGG 0.546601 6_3:+98676891 Msa0968340:CDS
ATCCATACCTGTAAGAGTAC+CGG 0.548223 6_3:-98673753 None:intergenic
GAGAATGTGAATACCAGAAG+AGG 0.549968 6_3:-98673128 None:intergenic
GAAACAACAGAAGCTGTGAC+TGG 0.551078 6_3:+98673082 Msa0968340:CDS
TTACCGTCGTTCACTTGTTG+CGG 0.553156 6_3:-98672753 None:intergenic
GAGTCTAAATCCTCCAGTAT+TGG 0.555145 6_3:+98675891 Msa0968340:intron
ATATAGCTTTCATCGCGGTA+TGG 0.558314 6_3:+98677621 Msa0968340:three_prime_UTR
ACTTCAGAGCTGGTAAAACA+TGG 0.559121 6_3:+98676508 Msa0968340:CDS
GGGCACAAGCAAAACATTCA+CGG 0.561048 6_3:-98673905 None:intergenic
CCAAAGCAAGGAGCGCGCCA+AGG 0.562955 6_3:+98675921 Msa0968340:CDS
CTGTTCGCGTAATCGTTGGC+AGG 0.566120 6_3:+98675318 Msa0968340:CDS
ACTCATCATTATCATCGGCT+TGG 0.571703 6_3:-98673294 None:intergenic
GCAGTTGACAACTTCAGAGC+TGG 0.572600 6_3:+98676498 Msa0968340:CDS
CTGGGTTATTGTGACCCGAA+CGG 0.572858 6_3:+98672664 Msa0968340:five_prime_UTR
ACTCATCAAAGCTTTGAAGT+GGG 0.573310 6_3:-98673524 None:intergenic
GAGGGTGGCAACTGGCATGA+AGG 0.574374 6_3:-98677452 None:intergenic
TCAAAGCTTTGAAGTGGGGA+TGG 0.574572 6_3:-98673519 None:intergenic
GGAATAGCCTGCTGTTGGAT+TGG 0.575000 6_3:-98673732 None:intergenic
GACAGAAGATGAAGAAAGCA+AGG 0.579533 6_3:+98673060 Msa0968340:CDS
TCCCCGAGCAACCACGTCAG+TGG 0.581927 6_3:-98676541 None:intergenic
GCCACTGACGTGGTTGCTCG+GGG 0.585127 6_3:+98676540 Msa0968340:CDS
TCTGGCAGAGCAGGGAGGAG+TGG 0.586378 6_3:+98676816 Msa0968340:CDS
GATGCTGTTCGCGTAATCGT+TGG 0.587216 6_3:+98675314 Msa0968340:CDS
GCTCGGGGAATGGATTTCAA+AGG 0.589155 6_3:+98676555 Msa0968340:CDS
GTGTTAGGCCTAACAAATCT+GGG 0.591435 6_3:+98672646 None:intergenic
TCCCATGCTCATGAAGCTCA+AGG 0.592058 6_3:+98673962 Msa0968340:CDS
TAGCTTTCATCGCGGTATGG+TGG 0.593143 6_3:+98677624 Msa0968340:three_prime_UTR
AATGGACTCATCATTATCAT+CGG 0.593722 6_3:-98673299 None:intergenic
ATTGGTCTTTCTCCAAAGCA+AGG 0.593737 6_3:+98675909 Msa0968340:CDS
GATTATGTTTGGCTATCAAG+AGG 0.596091 6_3:+98674254 Msa0968340:CDS
TATATGCTGATGCAGAATCT+GGG 0.604076 6_3:-98676605 None:intergenic
ATAGCTTATCAGATTCATCA+AGG 0.608799 6_3:-98675163 None:intergenic
ACGGCTATGACAAATGATAA+CGG 0.609192 6_3:-98674089 None:intergenic
TTAGATTAGATACATTCCGC+AGG 0.611279 6_3:-98676878 None:intergenic
CTCATCAAAGCTTTGAAGTG+GGG 0.611595 6_3:-98673523 None:intergenic
AAAGAGAGCGTATTATTGAG+GGG 0.614818 6_3:-98675238 None:intergenic
AAGTTCCCCATACAGCTCCT+TGG 0.617887 6_3:-98675938 None:intergenic
GCGCGCCAAGGAGCTGTATG+GGG 0.620211 6_3:+98675933 Msa0968340:CDS
GCATGGGACACACAAATGCA+AGG 0.627419 6_3:-98673947 None:intergenic
CACTTGGGTTGTCTACAATG+AGG 0.631532 6_3:-98677471 None:intergenic
AGATGGAACTTCACAGCCTG+AGG 0.632977 6_3:-98676907 None:intergenic
TAGAAGTGAGAAGCGTCGAA+GGG 0.634143 6_3:+98672714 Msa0968340:five_prime_UTR
ACTTGGGTTGTCTACAATGA+GGG 0.635609 6_3:-98677470 None:intergenic
TACATGTTCACTACAACGAG+AGG 0.636983 6_3:-98677521 None:intergenic
TAGGTCGTTCTGGCAGAGCA+GGG 0.637904 6_3:+98676808 Msa0968340:intron
ATAGCCAAACATAATCGAAG+TGG 0.642804 6_3:-98674247 None:intergenic
CATGGCACTAACCAATTCTG+TGG 0.643275 6_3:-98676629 None:intergenic
GCTTTGATGAGTTGAAAACA+AGG 0.652593 6_3:+98673535 Msa0968340:CDS
CTTCAGAGCTGGTAAAACAT+GGG 0.653708 6_3:+98676509 Msa0968340:CDS
CGTTTAATAAGAGACCACTT+GGG 0.662998 6_3:-98677486 None:intergenic
CATGGGACACACAAATGCAA+GGG 0.670275 6_3:-98673946 None:intergenic
AAGCTGTGACTGGAAAGAAG+AGG 0.671292 6_3:+98673092 Msa0968340:CDS
AGGAGGACATTCCATTCCTG+CGG 0.677331 6_3:+98676862 Msa0968340:CDS
CTCATTGTAGACAACCCAAG+TGG 0.677545 6_3:+98677472 Msa0968340:three_prime_UTR
CAAACATAATCGAAGTGGCG+TGG 0.678226 6_3:-98674242 None:intergenic
AGAACAAAATAAGCAACTCG+AGG 0.678710 6_3:+98673333 Msa0968340:CDS
AGATAGAATCTCTCTCAGGT+CGG 0.683000 6_3:-98676974 None:intergenic
TGGGTTGTCTACAATGAGGG+TGG 0.686123 6_3:-98677467 None:intergenic
TGGAGAAAGACCAATACTGG+AGG 0.691845 6_3:-98675901 None:intergenic
GTCGTTCTGGCAGAGCAGGG+AGG 0.714057 6_3:+98676811 Msa0968340:CDS
CAGCCGCAACAAGTGAACGA+CGG 0.758158 6_3:+98672750 Msa0968340:five_prime_UTR
TTGTGATATAGCTTTCATCG+CGG 0.767306 6_3:+98677616 Msa0968340:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGATTATACTTTTTTTTT+TGG + chr6_3:98674716-98674735 Msa0968340:intron 10.0%
!! AATAAAAAAATTATCAGTTG+AGG - chr6_3:98672988-98673007 None:intergenic 15.0%
!! TATTATGATAATATCTATCT+TGG - chr6_3:98673860-98673879 None:intergenic 15.0%
!!! TAATATTGTTTTTACTGATA+TGG + chr6_3:98673875-98673894 Msa0968340:intron 15.0%
!!! AATATTGTTTTTACTGATAT+GGG + chr6_3:98673876-98673895 Msa0968340:intron 15.0%
!! ATTATACTTTCATATATGAT+GGG + chr6_3:98674822-98674841 Msa0968340:intron 15.0%
!! AATTTCATGTTAAATTTGAT+TGG + chr6_3:98674912-98674931 Msa0968340:intron 15.0%
!! ATTTCATGTTAAATTTGATT+GGG + chr6_3:98674913-98674932 Msa0968340:intron 15.0%
!!! TATTTTTTCTTTCAACTTTT+TGG + chr6_3:98675116-98675135 Msa0968340:intron 15.0%
!! ATTGAAGGTAAAAAAAAATT+AGG - chr6_3:98675863-98675882 None:intergenic 15.0%
!!! TCTTTTATTTTTGTGTTTAT+TGG - chr6_3:98676095-98676114 None:intergenic 15.0%
!! TAGAAAAATTACATCATATA+TGG - chr6_3:98676449-98676468 None:intergenic 15.0%
!! AAGAATGTATAATAAAGAAA+TGG - chr6_3:98676731-98676750 None:intergenic 15.0%
!!! TAAATTTTAACATTGTTGTA+TGG - chr6_3:98677318-98677337 None:intergenic 15.0%
!!! TTTTTTTCATCATCATTTTT+TGG - chr6_3:98677354-98677373 None:intergenic 15.0%
!! TTTATAAATCAGACATTTAA+GGG - chr6_3:98677557-98677576 None:intergenic 15.0%
!! TAAAAATCTATTAAATGAGA+TGG - chr6_3:98677590-98677609 None:intergenic 15.0%
!! TAAAATGTAAGAGAAATAAT+TGG - chr6_3:98677702-98677721 None:intergenic 15.0%
!! TTCTGATAACATTATTATTC+TGG + chr6_3:98673565-98673584 Msa0968340:intron 20.0%
!!! AACATTATTATTCTGGAATA+TGG + chr6_3:98673572-98673591 Msa0968340:intron 20.0%
!!! TGTATATTTTCATGAATTGA+CGG + chr6_3:98673618-98673637 Msa0968340:intron 20.0%
!! CTAAAAAAACAACTGATTAT+TGG - chr6_3:98674044-98674063 None:intergenic 20.0%
!!! CAATAATCAGTTGTTTTTTT+AGG + chr6_3:98674042-98674061 Msa0968340:intron 20.0%
!! AAGTAATCATTACATGTATT+TGG + chr6_3:98674359-98674378 Msa0968340:intron 20.0%
!!! GATTATACTTTTTTTTTTGG+TGG + chr6_3:98674719-98674738 Msa0968340:intron 20.0%
!! GATTATACTTTCATATATGA+TGG + chr6_3:98674821-98674840 Msa0968340:intron 20.0%
!!! AAGATGACATCTAATTTTTA+TGG + chr6_3:98675419-98675438 Msa0968340:intron 20.0%
!!! AGATGACATCTAATTTTTAT+GGG + chr6_3:98675420-98675439 Msa0968340:intron 20.0%
!!! GTTTTTCTTCTATTTTCAAT+AGG + chr6_3:98675595-98675614 Msa0968340:intron 20.0%
!! AGAAACTAAATAATAACATC+AGG - chr6_3:98675828-98675847 None:intergenic 20.0%
!! ACAGATTTGTATATTAAAAC+AGG - chr6_3:98676253-98676272 None:intergenic 20.0%
!! GAAAAATTACATCATAGTTA+CGG - chr6_3:98676342-98676361 None:intergenic 20.0%
!!! ATAAACGTTGATTTTTCAAT+AGG + chr6_3:98676789-98676808 Msa0968340:intron 20.0%
!! GTTTATAAATCAGACATTTA+AGG - chr6_3:98677558-98677577 None:intergenic 20.0%
!! TACACTACATAAATCATAAT+GGG - chr6_3:98677677-98677696 None:intergenic 20.0%
!! ATACACTACATAAATCATAA+TGG - chr6_3:98677678-98677697 None:intergenic 20.0%
! CATTTCGATAGAAAGAAATT+CGG + chr6_3:98672831-98672850 Msa0968340:CDS 25.0%
! AAAAGTGAGATAAAAACGAT+TGG - chr6_3:98673190-98673209 None:intergenic 25.0%
! TTATTTAGCACGAAACATTA+AGG - chr6_3:98673366-98673385 None:intergenic 25.0%
! TAAAAAAAAGCGAAAGTGAA+TGG - chr6_3:98673434-98673453 None:intergenic 25.0%
! ATCAACTAGTTATTTGCAAT+TGG - chr6_3:98674502-98674521 None:intergenic 25.0%
!!! TATACTTTTTTTTTTGGTGG+TGG + chr6_3:98674722-98674741 Msa0968340:intron 25.0%
! ATGAATACTCAACAAATACT+GGG - chr6_3:98674852-98674871 None:intergenic 25.0%
! TATGAATACTCAACAAATAC+TGG - chr6_3:98674853-98674872 None:intergenic 25.0%
! TTACATAACACCTAATTGAA+AGG - chr6_3:98674894-98674913 None:intergenic 25.0%
!!! AAGCAAAAGTTAGTTTTTAC+CGG + chr6_3:98675476-98675495 Msa0968340:CDS 25.0%
!! TTTCTTCTATTTTCAATAGG+AGG + chr6_3:98675598-98675617 Msa0968340:intron 25.0%
! TACATTATTTAACACCAAAC+TGG - chr6_3:98675719-98675738 None:intergenic 25.0%
! GAATGTAATATGTAATGACT+TGG + chr6_3:98675743-98675762 Msa0968340:intron 25.0%
!!! AGTAACTTATTTTGCTCAAA+GGG - chr6_3:98676030-98676049 None:intergenic 25.0%
!!! AAGTAACTTATTTTGCTCAA+AGG - chr6_3:98676031-98676050 None:intergenic 25.0%
!! TAACAAATATGTTTTCGCAA+TGG - chr6_3:98676313-98676332 None:intergenic 25.0%
!!! ATTTGAGAAGAAGTATTCAT+AGG + chr6_3:98676670-98676689 Msa0968340:intron 25.0%
!!! TTTGAGAAGAAGTATTCATA+GGG + chr6_3:98676671-98676690 Msa0968340:intron 25.0%
!!! GTTACGATAGAATCTTTTTT+GGG - chr6_3:98677077-98677096 None:intergenic 25.0%
!!! GTTACGATAGAATCTTTTTT+GGG - chr6_3:98677077-98677096 None:intergenic 25.0%
!! GTTTAGATAGAATCTCTTTT+GGG - chr6_3:98677209-98677228 None:intergenic 25.0%
!! TGTTTAGATAGAATCTCTTT+TGG - chr6_3:98677210-98677229 None:intergenic 25.0%
! TACTGGATATGATTATATCA+TGG - chr6_3:98677432-98677451 None:intergenic 25.0%
CTTTCTATCGAAATGAATAC+CGG - chr6_3:98672826-98672845 None:intergenic 30.0%
GATTGAAATGATGATATACC+TGG - chr6_3:98672875-98672894 None:intergenic 30.0%
AAAAGATACCGATAACAGTT+TGG + chr6_3:98673021-98673040 Msa0968340:CDS 30.0%
TGAATAAAAGAAGCTGTTGA+CGG + chr6_3:98673226-98673245 Msa0968340:intron 30.0%
! AATGGACTCATCATTATCAT+CGG - chr6_3:98673302-98673321 None:intergenic 30.0%
! ATGATAATGATGAGTCCATT+AGG + chr6_3:98673302-98673321 Msa0968340:CDS 30.0%
AATCATAACATTCATGTCTC+CGG + chr6_3:98673486-98673505 Msa0968340:CDS 30.0%
!! TGTTTTTACTGATATGGGAT+AGG + chr6_3:98673881-98673900 Msa0968340:intron 30.0%
!!! TTTTTTTAGGCTCATGCAAA+AGG + chr6_3:98674055-98674074 Msa0968340:intron 30.0%
ATGTTTGACCAGATAATTCA+CGG - chr6_3:98674111-98674130 None:intergenic 30.0%
TTACATGTATTTGGTCCTTA+AGG + chr6_3:98674368-98674387 Msa0968340:intron 30.0%
GGCATTAAATGTAATCCTTA+AGG - chr6_3:98674386-98674405 None:intergenic 30.0%
TACAGCATAAATGACAAAGT+GGG - chr6_3:98674432-98674451 None:intergenic 30.0%
TATTTGCAATTGGTTGACAA+TGG - chr6_3:98674492-98674511 None:intergenic 30.0%
!! AAATTTAGTGTTTGCTGTCT+GGG - chr6_3:98674551-98674570 None:intergenic 30.0%
!! AAAATTTAGTGTTTGCTGTC+TGG - chr6_3:98674552-98674571 None:intergenic 30.0%
! GACAGCAAACACTAAATTTT+AGG + chr6_3:98674552-98674571 Msa0968340:intron 30.0%
GACAATGCATAAAATATGCA+AGG - chr6_3:98674767-98674786 None:intergenic 30.0%
ATAGCTTATCAGATTCATCA+AGG - chr6_3:98675166-98675185 None:intergenic 30.0%
! AAAAGAGAGCGTATTATTGA+GGG - chr6_3:98675242-98675261 None:intergenic 30.0%
! AAAAAGAGAGCGTATTATTG+AGG - chr6_3:98675243-98675262 None:intergenic 30.0%
GAAGAACAGTCTTAAAGTAA+TGG - chr6_3:98675387-98675406 None:intergenic 30.0%
! ATTTTTATGGGAATCACTTC+AGG + chr6_3:98675432-98675451 Msa0968340:intron 30.0%
! AGATGAATGCTTTAGATAAC+AGG + chr6_3:98675556-98675575 Msa0968340:intron 30.0%
CTTTAGATAACAGGCATTAT+TGG + chr6_3:98675565-98675584 Msa0968340:intron 30.0%
TTAACACCAAACTGGAATAA+GGG - chr6_3:98675711-98675730 None:intergenic 30.0%
TTTAACACCAAACTGGAATA+AGG - chr6_3:98675712-98675731 None:intergenic 30.0%
TAGACTCTTCAAGATATTGA+AGG - chr6_3:98675878-98675897 None:intergenic 30.0%
GAGCAAAATAAGTTACTTGT+TGG + chr6_3:98676033-98676052 Msa0968340:intron 30.0%
!! TTTTGTGTTTATTGGCTGAA+GGG - chr6_3:98676087-98676106 None:intergenic 30.0%
!! TTTTTGTGTTTATTGGCTGA+AGG - chr6_3:98676088-98676107 None:intergenic 30.0%
AAATAGTATGGACAAGAACT+TGG - chr6_3:98676139-98676158 None:intergenic 30.0%
TCTTGTCCATACTATTTGTA+TGG + chr6_3:98676142-98676161 Msa0968340:intron 30.0%
TCTTCACCATACAAATAGTA+TGG - chr6_3:98676151-98676170 None:intergenic 30.0%
ATACTATTTGTATGGTGAAG+AGG + chr6_3:98676150-98676169 Msa0968340:intron 30.0%
CAAAAACAATTACACAGACA+AGG - chr6_3:98676191-98676210 None:intergenic 30.0%
CTAAAACAATGTTAATGCCA+TGG - chr6_3:98676650-98676669 None:intergenic 30.0%
!! TTGAGAAGAAGTATTCATAG+GGG + chr6_3:98676672-98676691 Msa0968340:intron 30.0%
CGTATTATTCTATTCACTCA+TGG + chr6_3:98676703-98676722 Msa0968340:intron 30.0%
!! GTTGAGATTGAATCACTTTT+GGG - chr6_3:98677017-98677036 None:intergenic 30.0%
!!! GGTTACGATAGAATCTTTTT+TGG - chr6_3:98677078-98677097 None:intergenic 30.0%
!!! GGTTACGATAGAATCTTTTT+TGG - chr6_3:98677078-98677097 None:intergenic 30.0%
GAGATTCTATCTAAACAAAC+CGG + chr6_3:98677213-98677232 Msa0968340:exon 30.0%
ACATTTCACTGTCAAAAACA+TGG - chr6_3:98677270-98677289 None:intergenic 30.0%
!!! ATCATCATTTTTTGGAGATG+GGG - chr6_3:98677346-98677365 None:intergenic 30.0%
!!! CATCATCATTTTTTGGAGAT+GGG - chr6_3:98677347-98677366 None:intergenic 30.0%
!!! TCATCATCATTTTTTGGAGA+TGG - chr6_3:98677348-98677367 None:intergenic 30.0%
GATGAAAAAAAAAGACTGAG+TGG + chr6_3:98677363-98677382 Msa0968340:three_prime_UTR 30.0%
!! TTTAAGCTTCTGGAAGTATT+AGG - chr6_3:98677409-98677428 None:intergenic 30.0%
TATATCATGGTTTAAGCTTC+TGG - chr6_3:98677419-98677438 None:intergenic 30.0%
AATCTTCGCCAAACTGTTAT+CGG - chr6_3:98673032-98673051 None:intergenic 35.0%
ACGATTGGTACAAATGATGA+TGG - chr6_3:98673175-98673194 None:intergenic 35.0%
TTGTTCTTTCTTCAGCCTAA+TGG - chr6_3:98673320-98673339 None:intergenic 35.0%
AGAACAAAATAAGCAACTCG+AGG + chr6_3:98673333-98673352 Msa0968340:CDS 35.0%
AAATAAGCAACTCGAGGTAT+AGG + chr6_3:98673339-98673358 Msa0968340:intron 35.0%
AAAAAGCGAAAGTGAATGGT+GGG - chr6_3:98673430-98673449 None:intergenic 35.0%
AAAAAAGCGAAAGTGAATGG+TGG - chr6_3:98673431-98673450 None:intergenic 35.0%
!! ACTCATCAAAGCTTTGAAGT+GGG - chr6_3:98673527-98673546 None:intergenic 35.0%
!! AACTCATCAAAGCTTTGAAG+TGG - chr6_3:98673528-98673547 None:intergenic 35.0%
! GCTTTGATGAGTTGAAAACA+AGG + chr6_3:98673535-98673554 Msa0968340:CDS 35.0%
! GATGAGTTGAAAACAAGGTT+AGG + chr6_3:98673540-98673559 Msa0968340:intron 35.0%
AATGTCCGTCCTATTTATTG+CGG + chr6_3:98673676-98673695 Msa0968340:intron 35.0%
AGATTCCGCAATAAATAGGA+CGG - chr6_3:98673684-98673703 None:intergenic 35.0%
ATTATTGGAACTCATGACAC+GGG - chr6_3:98674029-98674048 None:intergenic 35.0%
GATTATTGGAACTCATGACA+CGG - chr6_3:98674030-98674049 None:intergenic 35.0%
ACGGCTATGACAAATGATAA+CGG - chr6_3:98674092-98674111 None:intergenic 35.0%
ATAGCCAAACATAATCGAAG+TGG - chr6_3:98674250-98674269 None:intergenic 35.0%
GATTATGTTTGGCTATCAAG+AGG + chr6_3:98674254-98674273 Msa0968340:CDS 35.0%
TTTGGCTATCAAGAGGAAAA+AGG + chr6_3:98674261-98674280 Msa0968340:CDS 35.0%
AGGATTACATTTAATGCCTG+TGG + chr6_3:98674388-98674407 Msa0968340:intron 35.0%
CTACAGCATAAATGACAAAG+TGG - chr6_3:98674433-98674452 None:intergenic 35.0%
!!! TTTTGGAATGTGTTCAGACT+TGG - chr6_3:98674591-98674610 None:intergenic 35.0%
! GCTTCTCAATAACACTGTTT+TGG - chr6_3:98674608-98674627 None:intergenic 35.0%
TGCATGTTTGCCTTTCAATT+AGG + chr6_3:98674881-98674900 Msa0968340:intron 35.0%
TCAATCTGCTTGAACAATTG+TGG - chr6_3:98675194-98675213 None:intergenic 35.0%
! AAAGAGAGCGTATTATTGAG+GGG - chr6_3:98675241-98675260 None:intergenic 35.0%
! AAGTTTTCCTTCTTCACTTC+CGG - chr6_3:98675498-98675517 None:intergenic 35.0%
AAGGAAAACTTCTCGCAATT+CGG + chr6_3:98675507-98675526 Msa0968340:CDS 35.0%
AACATTCCCTTATTCCAGTT+TGG + chr6_3:98675702-98675721 Msa0968340:intron 35.0%
CTTCTTGAGACAAATCAGAA+TGG - chr6_3:98675993-98676012 None:intergenic 35.0%
! TTCTGATTTGTCTCAAGAAG+AGG + chr6_3:98675993-98676012 Msa0968340:CDS 35.0%
AACTTGGTCATATGCTTCAT+CGG - chr6_3:98676123-98676142 None:intergenic 35.0%
CTGTTCATCATTACTGAACA+TGG + chr6_3:98676223-98676242 Msa0968340:intron 35.0%
! TGGTTTTTGACAGAACACTA+TGG - chr6_3:98676429-98676448 None:intergenic 35.0%
TATATGCTGATGCAGAATCT+GGG - chr6_3:98676608-98676627 None:intergenic 35.0%
ATATATGCTGATGCAGAATC+TGG - chr6_3:98676609-98676628 None:intergenic 35.0%
TCAGCATATATCCACAGAAT+TGG + chr6_3:98676618-98676637 Msa0968340:CDS 35.0%
!! GATTTTTCAATAGGTCGTTC+TGG + chr6_3:98676798-98676817 Msa0968340:intron 35.0%
! AGCGATTACATTTTACACAG+AGG + chr6_3:98676842-98676861 Msa0968340:CDS 35.0%
! GATTACATTTTACACAGAGG+AGG + chr6_3:98676845-98676864 Msa0968340:CDS 35.0%
TTAGATTAGATACATTCCGC+AGG - chr6_3:98676881-98676900 None:intergenic 35.0%
GCGGAATGTATCTAATCTAA+TGG + chr6_3:98676881-98676900 Msa0968340:CDS 35.0%
AGATTCTATCTCAACCAAAC+CGG + chr6_3:98676986-98677005 Msa0968340:CDS 35.0%
! GGTTGAGATTGAATCACTTT+TGG - chr6_3:98677018-98677037 None:intergenic 35.0%
TTCAACTTCTTCTGCAACTT+CGG - chr6_3:98677044-98677063 None:intergenic 35.0%
!!! CGATAGAATCTTTTTTGGGT+TGG - chr6_3:98677073-98677092 None:intergenic 35.0%
AGATTCTATCGTAACCAAAC+CGG + chr6_3:98677082-98677101 Msa0968340:CDS 35.0%
!! GTTGAGATCGAATCACTTTT+GGG - chr6_3:98677113-98677132 None:intergenic 35.0%
!!! CGATAGAATCTTTTTTGGGT+CGG - chr6_3:98677073-98677092 None:intergenic 35.0%
AGATTCTATCGTAACCAAAC+CGG + chr6_3:98677082-98677101 Msa0968340:CDS 35.0%
CGTTTAATAAGAGACCACTT+GGG - chr6_3:98677489-98677508 None:intergenic 35.0%
CCAAGTGGTCTCTTATTAAA+CGG + chr6_3:98677487-98677506 Msa0968340:three_prime_UTR 35.0%
CAAGTGGTCTCTTATTAAAC+GGG + chr6_3:98677488-98677507 Msa0968340:three_prime_UTR 35.0%
TTGTGATATAGCTTTCATCG+CGG + chr6_3:98677616-98677635 Msa0968340:three_prime_UTR 35.0%
CTGCAACCGTACTATCAATA+TGG + chr6_3:98672776-98672795 Msa0968340:exon 40.0%
GCTTTCTTCATCTTCTGTCA+CGG - chr6_3:98673059-98673078 None:intergenic 40.0%
GACAGAAGATGAAGAAAGCA+AGG + chr6_3:98673060-98673079 Msa0968340:CDS 40.0%
GAGAATGTGAATACCAGAAG+AGG - chr6_3:98673131-98673150 None:intergenic 40.0%
!! TTGACTTGGATGTGGAACTT+CGG - chr6_3:98673264-98673283 None:intergenic 40.0%
!! TTCTTCGTTTGACTTGGATG+TGG - chr6_3:98673272-98673291 None:intergenic 40.0%
ACATCCAAGTCAAACGAAGA+AGG + chr6_3:98673271-98673290 Msa0968340:CDS 40.0%
! ACTCATCATTATCATCGGCT+TGG - chr6_3:98673297-98673316 None:intergenic 40.0%
!! CTCATCAAAGCTTTGAAGTG+GGG - chr6_3:98673526-98673545 None:intergenic 40.0%
GTCCTATTTATTGCGGAATC+TGG + chr6_3:98673683-98673702 Msa0968340:intron 40.0%
TGCCAGATTCCGCAATAAAT+AGG - chr6_3:98673688-98673707 None:intergenic 40.0%
! ATCCATACCTGTAAGAGTAC+CGG - chr6_3:98673756-98673775 None:intergenic 40.0%
! CTTACAGGTATGGATTGCAT+TGG + chr6_3:98673761-98673780 Msa0968340:CDS 40.0%
! TTTTAGGCTCATGCAAAAGG+CGG + chr6_3:98674058-98674077 Msa0968340:intron 40.0%
TGTCATAGCCGTGAATTATC+TGG + chr6_3:98674100-98674119 Msa0968340:CDS 40.0%
! ATACAGAGAGTGCAAAAAGC+TGG + chr6_3:98674129-98674148 Msa0968340:CDS 40.0%
! GATGCGAAACTTTTCTCCTT+TGG - chr6_3:98674155-98674174 None:intergenic 40.0%
ACATTTAATGCCTGTGGAGA+TGG + chr6_3:98674394-98674413 Msa0968340:intron 40.0%
CAATGGACAGAGCAAAGTAT+AGG - chr6_3:98674475-98674494 None:intergenic 40.0%
CTTCCATATGACTAACCAGT+TGG + chr6_3:98674640-98674659 Msa0968340:intron 40.0%
! TGTGTGTTTTCCTGTTCAGT+GGG - chr6_3:98674668-98674687 None:intergenic 40.0%
!!! CTTTTTTTTTTGGTGGTGGC+CGG + chr6_3:98674726-98674745 Msa0968340:intron 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+GGG + chr6_3:98674727-98674746 Msa0968340:intron 40.0%
CATAAAATATGCAAGGTCCG+CGG - chr6_3:98674760-98674779 None:intergenic 40.0%
TAGTAGAGTCCAACTACAGT+TGG + chr6_3:98674948-98674967 Msa0968340:intron 40.0%
CAATCAACACCAACTGTAGT+TGG - chr6_3:98674960-98674979 None:intergenic 40.0%
GCTCGATCTTCAACAAAATC+AGG - chr6_3:98675278-98675297 None:intergenic 40.0%
TGGGAATCACTTCAGGAATA+TGG + chr6_3:98675439-98675458 Msa0968340:intron 40.0%
! GTTTTTACCGGAAGTGAAGA+AGG + chr6_3:98675488-98675507 Msa0968340:CDS 40.0%
! AATTCGGCAAAGTTTTGCAG+AGG + chr6_3:98675523-98675542 Msa0968340:CDS 40.0%
GAGTCTAAATCCTCCAGTAT+TGG + chr6_3:98675891-98675910 Msa0968340:intron 40.0%
! CTTTGGAGAAAGACCAATAC+TGG - chr6_3:98675907-98675926 None:intergenic 40.0%
!! ATTGGTCTTTCTCCAAAGCA+AGG + chr6_3:98675909-98675928 Msa0968340:CDS 40.0%
AAGCCTTAATCCCACTAAGT+GGG + chr6_3:98676379-98676398 Msa0968340:intron 40.0%
ACTTCAGAGCTGGTAAAACA+TGG + chr6_3:98676508-98676527 Msa0968340:CDS 40.0%
CTTCAGAGCTGGTAAAACAT+GGG + chr6_3:98676509-98676528 Msa0968340:CDS 40.0%
TTAGATACATTCCGCAGGAA+TGG - chr6_3:98676876-98676895 None:intergenic 40.0%
TCTAATCTAATGGCATCCTC+AGG + chr6_3:98676891-98676910 Msa0968340:CDS 40.0%
TGAAGTTCCATCTTGGTTGA+CGG + chr6_3:98676917-98676936 Msa0968340:CDS 40.0%
AGATAGAATCTCTCTCAGGT+CGG - chr6_3:98676977-98676996 None:intergenic 40.0%
GTTGAGATAGAATCTCTCTC+AGG - chr6_3:98676981-98677000 None:intergenic 40.0%
!! GAATCACTTTTGGGTAGATC+CGG - chr6_3:98677008-98677027 None:intergenic 40.0%
!! GAATCACTTTTGGGTAGATC+CGG - chr6_3:98677008-98677027 None:intergenic 40.0%
! GGTTGAGATCGAATCACTTT+TGG - chr6_3:98677114-98677133 None:intergenic 40.0%
!! GAATCTCTTTTGGGTAGATC+CGG - chr6_3:98677200-98677219 None:intergenic 40.0%
TTGTCACAGGCTTATAGATC+CGG - chr6_3:98677235-98677254 None:intergenic 40.0%
AAGTATTAGGCAACATTGCC+TGG - chr6_3:98677396-98677415 None:intergenic 40.0%
! ACTTGGGTTGTCTACAATGA+GGG - chr6_3:98677473-98677492 None:intergenic 40.0%
CCGTTTAATAAGAGACCACT+TGG - chr6_3:98677490-98677509 None:intergenic 40.0%
TACATGTTCACTACAACGAG+AGG - chr6_3:98677524-98677543 None:intergenic 40.0%
ATATAGCTTTCATCGCGGTA+TGG + chr6_3:98677621-98677640 Msa0968340:three_prime_UTR 40.0%
TGTTGACAGTAAACCCGTTC+GGG - chr6_3:98672681-98672700 None:intergenic 45.0%
CTGTTGACAGTAAACCCGTT+CGG - chr6_3:98672682-98672701 None:intergenic 45.0%
!! TAGAAGTGAGAAGCGTCGAA+GGG + chr6_3:98672714-98672733 Msa0968340:five_prime_UTR 45.0%
! TTACCGTCGTTCACTTGTTG+CGG - chr6_3:98672756-98672775 None:intergenic 45.0%
! CGCTCGCCATATTGATAGTA+CGG - chr6_3:98672785-98672804 None:intergenic 45.0%
! TACCTGGAAGCGTGCAATAT+CGG - chr6_3:98672859-98672878 None:intergenic 45.0%
GAAACAACAGAAGCTGTGAC+TGG + chr6_3:98673082-98673101 Msa0968340:CDS 45.0%
AAGCTGTGACTGGAAAGAAG+AGG + chr6_3:98673092-98673111 Msa0968340:CDS 45.0%
AAGCGCAAGAAAACCTCTTC+TGG + chr6_3:98673115-98673134 Msa0968340:CDS 45.0%
! TTGGCCTTCTTCGTTTGACT+TGG - chr6_3:98673278-98673297 None:intergenic 45.0%
!! TCAAAGCTTTGAAGTGGGGA+TGG - chr6_3:98673522-98673541 None:intergenic 45.0%
AATCCAACAGCAGGCTATTC+CGG + chr6_3:98673734-98673753 Msa0968340:CDS 45.0%
TTCCGGTACTCTTACAGGTA+TGG + chr6_3:98673751-98673770 Msa0968340:CDS 45.0%
GGGCACAAGCAAAACATTCA+CGG - chr6_3:98673908-98673927 None:intergenic 45.0%
CATGGGACACACAAATGCAA+GGG - chr6_3:98673949-98673968 None:intergenic 45.0%
ACCTTGAGCTTCATGAGCAT+GGG - chr6_3:98673966-98673985 None:intergenic 45.0%
TACCTTGAGCTTCATGAGCA+TGG - chr6_3:98673967-98673986 None:intergenic 45.0%
CAAACATAATCGAAGTGGCG+TGG - chr6_3:98674245-98674264 None:intergenic 45.0%
CACGCCACTTCGATTATGTT+TGG + chr6_3:98674243-98674262 Msa0968340:CDS 45.0%
! GGAAAAAGGTTGATCTCAGC+AGG + chr6_3:98674275-98674294 Msa0968340:CDS 45.0%
CAGTTATAGACCATCTCCAC+AGG - chr6_3:98674407-98674426 None:intergenic 45.0%
!! GTGTTTGCTGTCTGGGTTTA+CGG - chr6_3:98674544-98674563 None:intergenic 45.0%
! GCTCCAACTGGTTAGTCATA+TGG - chr6_3:98674646-98674665 None:intergenic 45.0%
! GTGTGTGTTTTCCTGTTCAG+TGG - chr6_3:98674669-98674688 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr6_3:98674789-98674808 None:intergenic 45.0%
TGGAGAAAGACCAATACTGG+AGG - chr6_3:98675904-98675923 None:intergenic 45.0%
CACTTAGTGGGATTAAGGCT+TGG - chr6_3:98676380-98676399 None:intergenic 45.0%
CAAGCCTTAATCCCACTAAG+TGG + chr6_3:98676378-98676397 Msa0968340:intron 45.0%
AGCCTTAATCCCACTAAGTG+GGG + chr6_3:98676380-98676399 Msa0968340:intron 45.0%
TTAATCCCACTAAGTGGGGT+CGG + chr6_3:98676384-98676403 Msa0968340:intron 45.0%
CATGGCACTAACCAATTCTG+TGG - chr6_3:98676632-98676651 None:intergenic 45.0%
CACAGAATTGGTTAGTGCCA+TGG + chr6_3:98676630-98676649 Msa0968340:intron 45.0%
TGCAGTTGCAGAAGAAGAAG+TGG + chr6_3:98676943-98676962 Msa0968340:CDS 45.0%
!! ACTTTTGGGTAGATCCGGTT+TGG - chr6_3:98677003-98677022 None:intergenic 45.0%
CTTCTTCTGCAACTTCGGTT+TGG - chr6_3:98677039-98677058 None:intergenic 45.0%
!! ACTTTTGGGTAGATCCGGTT+TGG - chr6_3:98677003-98677022 None:intergenic 45.0%
CTTCTTCTGCAACTTCGGTT+TGG - chr6_3:98677039-98677058 None:intergenic 45.0%
!! TCTTTTGGGTAGATCCGGTT+TGG - chr6_3:98677195-98677214 None:intergenic 45.0%
AAGCCTGTGACAACAGAGAA+TGG + chr6_3:98677242-98677261 Msa0968340:three_prime_UTR 45.0%
AGCCTGTGACAACAGAGAAT+GGG + chr6_3:98677243-98677262 Msa0968340:three_prime_UTR 45.0%
! CACTTGGGTTGTCTACAATG+AGG - chr6_3:98677474-98677493 None:intergenic 45.0%
CTCATTGTAGACAACCCAAG+TGG + chr6_3:98677472-98677491 Msa0968340:three_prime_UTR 45.0%
CTGGGTTATTGTGACCCGAA+CGG + chr6_3:98672664-98672683 Msa0968340:five_prime_UTR 50.0%
TGGGTTATTGTGACCCGAAC+GGG + chr6_3:98672665-98672684 Msa0968340:five_prime_UTR 50.0%
!! GTAGAAGTGAGAAGCGTCGA+AGG + chr6_3:98672713-98672732 Msa0968340:five_prime_UTR 50.0%
!!! GACTCGTCGTTTTTGTTCGC+CGG + chr6_3:98672804-98672823 Msa0968340:CDS 50.0%
TGGGGATGGCACATTGTAAC+CGG - chr6_3:98673508-98673527 None:intergenic 50.0%
TTGCGGAATCTGGCAGAACT+TGG + chr6_3:98673693-98673712 Msa0968340:intron 50.0%
ACCAACACCAATCCAACAGC+AGG + chr6_3:98673725-98673744 Msa0968340:CDS 50.0%
GGAATAGCCTGCTGTTGGAT+TGG - chr6_3:98673735-98673754 None:intergenic 50.0%
GGCTATTCCGGTACTCTTAC+AGG + chr6_3:98673746-98673765 Msa0968340:CDS 50.0%
! TGTTTTGCTTGTGCCCCAAC+TGG + chr6_3:98673912-98673931 Msa0968340:CDS 50.0%
! GGTTTTTCCAGAGCCAGTTG+GGG - chr6_3:98673928-98673947 None:intergenic 50.0%
! GGGTTTTTCCAGAGCCAGTT+GGG - chr6_3:98673929-98673948 None:intergenic 50.0%
! AGGGTTTTTCCAGAGCCAGT+TGG - chr6_3:98673930-98673949 None:intergenic 50.0%
GCATGGGACACACAAATGCA+AGG - chr6_3:98673950-98673969 None:intergenic 50.0%
TCCCATGCTCATGAAGCTCA+AGG + chr6_3:98673962-98673981 Msa0968340:CDS 50.0%
CGTTGGAAGCAAAAGACAGC+TGG - chr6_3:98674005-98674024 None:intergenic 50.0%
GAGTGCAAAAAGCTGGCCAA+AGG + chr6_3:98674136-98674155 Msa0968340:CDS 50.0%
GATGCTGTTCGCGTAATCGT+TGG + chr6_3:98675314-98675333 Msa0968340:CDS 50.0%
AAGTTCCCCATACAGCTCCT+TGG - chr6_3:98675941-98675960 None:intergenic 50.0%
GACCCCACTTAGTGGGATTA+AGG - chr6_3:98676385-98676404 None:intergenic 50.0%
GCAGTTGACAACTTCAGAGC+TGG + chr6_3:98676498-98676517 Msa0968340:CDS 50.0%
!!! GGTTTTGATTGCCACTGACG+TGG + chr6_3:98676530-98676549 Msa0968340:CDS 50.0%
! GCTCGGGGAATGGATTTCAA+AGG + chr6_3:98676555-98676574 Msa0968340:CDS 50.0%
AGGAGGACATTCCATTCCTG+CGG + chr6_3:98676862-98676881 Msa0968340:CDS 50.0%
AGATGGAACTTCACAGCCTG+AGG - chr6_3:98676910-98676929 None:intergenic 50.0%
CAGGCTGTGAAGTTCCATCT+TGG + chr6_3:98676910-98676929 Msa0968340:CDS 50.0%
TGCAACTCCGTCAACCAAGA+TGG - chr6_3:98676927-98676946 None:intergenic 50.0%
GTCCCATTCTCTGTTGTCAC+AGG - chr6_3:98677248-98677267 None:intergenic 50.0%
TCTACAATGAGGGTGGCAAC+TGG - chr6_3:98677463-98677482 None:intergenic 50.0%
TGGGTTGTCTACAATGAGGG+TGG - chr6_3:98677470-98677489 None:intergenic 50.0%
TAGCTTTCATCGCGGTATGG+TGG + chr6_3:98677624-98677643 Msa0968340:three_prime_UTR 50.0%
CAGCCGCAACAAGTGAACGA+CGG + chr6_3:98672750-98672769 Msa0968340:five_prime_UTR 55.0%
!! GCCTGCTGTTGGATTGGTGT+TGG - chr6_3:98673729-98673748 None:intergenic 55.0%
GTACCGGAATAGCCTGCTGT+TGG - chr6_3:98673740-98673759 None:intergenic 55.0%
GAACTCATGACACGGGACGT+TGG - chr6_3:98674022-98674041 None:intergenic 55.0%
AAGGTCCGCGGTTCAAATCC+CGG - chr6_3:98674748-98674767 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr6_3:98674794-98674813 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr6_3:98674791-98674810 Msa0968340:intron 55.0%
CTGTTCGCGTAATCGTTGGC+AGG + chr6_3:98675318-98675337 Msa0968340:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr6_3:98676392-98676411 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr6_3:98676393-98676412 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr6_3:98676392-98676411 Msa0968340:intron 55.0%
TTGCCACTGACGTGGTTGCT+CGG + chr6_3:98676538-98676557 Msa0968340:CDS 55.0%
ATAGGTCGTTCTGGCAGAGC+AGG + chr6_3:98676807-98676826 Msa0968340:intron 55.0%
TAGGTCGTTCTGGCAGAGCA+GGG + chr6_3:98676808-98676827 Msa0968340:intron 55.0%
AGACTGAGTGGCAAGTGTCC+AGG + chr6_3:98677375-98677394 Msa0968340:three_prime_UTR 55.0%
! GGCAACTGGCATGAAGGTAC+TGG - chr6_3:98677449-98677468 None:intergenic 55.0%
!! GCGTCGAAGGGAAAGTGCTC+AGG + chr6_3:98672726-98672745 Msa0968340:five_prime_UTR 60.0%
CGCCGATATTGCACGCTTCC+AGG + chr6_3:98672854-98672873 Msa0968340:CDS 60.0%
! CCTGTTCAGTGGGCTCCAAC+TGG - chr6_3:98674658-98674677 None:intergenic 60.0%
CCAGTTGGAGCCCACTGAAC+AGG + chr6_3:98674655-98674674 Msa0968340:intron 60.0%
AGCGCGCCAAGGAGCTGTAT+GGG + chr6_3:98675932-98675951 Msa0968340:CDS 60.0%
TGCCACTGACGTGGTTGCTC+GGG + chr6_3:98676539-98676558 Msa0968340:CDS 60.0%
TGACGTGGTTGCTCGGGGAA+TGG + chr6_3:98676545-98676564 Msa0968340:CDS 60.0%
GAGGGTGGCAACTGGCATGA+AGG - chr6_3:98677455-98677474 None:intergenic 60.0%
! GCTTGTGCCCCAACTGGCTC+TGG + chr6_3:98673918-98673937 Msa0968340:CDS 65.0%
GGTGGCCGGGATTTGAACCG+CGG + chr6_3:98674740-98674759 Msa0968340:intron 65.0%
CCTTGGCGCGCTCCTTGCTT+TGG - chr6_3:98675924-98675943 None:intergenic 65.0%
! CCAAAGCAAGGAGCGCGCCA+AGG + chr6_3:98675921-98675940 Msa0968340:CDS 65.0%
GAGCGCGCCAAGGAGCTGTA+TGG + chr6_3:98675931-98675950 Msa0968340:CDS 65.0%
GCGCGCCAAGGAGCTGTATG+GGG + chr6_3:98675933-98675952 Msa0968340:CDS 65.0%
GCCACTGACGTGGTTGCTCG+GGG + chr6_3:98676540-98676559 Msa0968340:CDS 65.0%
TCCCCGAGCAACCACGTCAG+TGG - chr6_3:98676544-98676563 None:intergenic 65.0%
GTCGTTCTGGCAGAGCAGGG+AGG + chr6_3:98676811-98676830 Msa0968340:CDS 65.0%
TCTGGCAGAGCAGGGAGGAG+TGG + chr6_3:98676816-98676835 Msa0968340:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 98672656 98677755 98672656 ID=Msa0968340;Name=Msa0968340
chr6_3 mRNA 98672656 98677755 98672656 ID=Msa0968340-mRNA-1;Parent=Msa0968340;Name=Msa0968340-mRNA-1;_AED=0.11;_eAED=0.14;_QI=139|0.81|0.91|1|1|1|12|529|600
chr6_3 exon 98672656 98672875 98672656 ID=Msa0968340-mRNA-1:exon:18539;Parent=Msa0968340-mRNA-1
chr6_3 exon 98673019 98673136 98673019 ID=Msa0968340-mRNA-1:exon:18540;Parent=Msa0968340-mRNA-1
chr6_3 exon 98673236 98673354 98673236 ID=Msa0968340-mRNA-1:exon:18541;Parent=Msa0968340-mRNA-1
chr6_3 exon 98673465 98673556 98673465 ID=Msa0968340-mRNA-1:exon:18542;Parent=Msa0968340-mRNA-1
chr6_3 exon 98673709 98673811 98673709 ID=Msa0968340-mRNA-1:exon:18543;Parent=Msa0968340-mRNA-1
chr6_3 exon 98673903 98673983 98673903 ID=Msa0968340-mRNA-1:exon:18544;Parent=Msa0968340-mRNA-1
chr6_3 exon 98674064 98674296 98674064 ID=Msa0968340-mRNA-1:exon:18545;Parent=Msa0968340-mRNA-1
chr6_3 exon 98675148 98675342 98675148 ID=Msa0968340-mRNA-1:exon:18546;Parent=Msa0968340-mRNA-1
chr6_3 exon 98675454 98675544 98675454 ID=Msa0968340-mRNA-1:exon:18547;Parent=Msa0968340-mRNA-1
chr6_3 exon 98675892 98676014 98675892 ID=Msa0968340-mRNA-1:exon:18548;Parent=Msa0968340-mRNA-1
chr6_3 exon 98676489 98676639 98676489 ID=Msa0968340-mRNA-1:exon:18549;Parent=Msa0968340-mRNA-1
chr6_3 exon 98676811 98677755 98676811 ID=Msa0968340-mRNA-1:exon:18550;Parent=Msa0968340-mRNA-1
chr6_3 five_prime_UTR 98672656 98672794 98672656 ID=Msa0968340-mRNA-1:five_prime_utr;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98672795 98672875 98672795 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98673019 98673136 98673019 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98673236 98673354 98673236 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98673465 98673556 98673465 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98673709 98673811 98673709 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98673903 98673983 98673903 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98674064 98674296 98674064 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98675148 98675342 98675148 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98675454 98675544 98675454 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98675892 98676014 98675892 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98676489 98676639 98676489 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 CDS 98676811 98677226 98676811 ID=Msa0968340-mRNA-1:cds;Parent=Msa0968340-mRNA-1
chr6_3 three_prime_UTR 98677227 98677755 98677227 ID=Msa0968340-mRNA-1:three_prime_utr;Parent=Msa0968340-mRNA-1
Gene Sequence

>Msa0968340

ATGGCGAGCGACTCGTCGTTTTTGTTCGCCGGTATTCATTTCGATAGAAAGAAATTCGGCGCCGATATTGCACGCTTCCAGAAAAAAGATACCGATAACAGTTTGGCGAAGATTCAGACCGTGACAGAAGATGAAGAAAGCAAGGAAACAACAGAAGCTGTGACTGGAAAGAAGAGGAAGCGCAAGAAAACCTCTTCTGAAGCTGTTGACGGATTCAGTGTATTCCGAAGTTCCACATCCAAGTCAAACGAAGAAGGCCAAGCCGATGATAATGATGAGTCCATTAGGCTGAAGAAAGAACAAAATAAGCAACTCGAGCGCGATGCTATCTTCAGAAAAAATCATAACATTCATGTCTCCGGTTACAATGTGCCATCCCCACTTCAAAGCTTTGATGAGTTGAAAACAAGAACTTGGATTCAGAGAACCAACACCAATCCAACAGCAGGCTATTCCGGTACTCTTACAGGTATGGATTGCATTGGATATTACATTCTTCAGAAAGTTGTTGCTGACCGTGAATGTTTTGCTTGTGCCCCAACTGGCTCTGGAAAAACCCTTGCATTTGTGTGTCCCATGCTCATGAAGCTCAAGGCTCATGCAAAAGGCGGCGTTCGAGCCGTTATCATTTGTCATAGCCGTGAATTATCTGGTCAAACATACAGAGAGTGCAAAAAGCTGGCCAAAGGAGAAAAGTTTCGCATCAAGTTAATGACAAAAAATCTTTTAAGAAATGCTGATTTTTCAAAATTTTCTTGTGACATACTTATATCCACGCCACTTCGATTATGTTTGGCTATCAAGAGGAAAAAGGTTGATCTCAGCAGAGTTGAGTATCTTGTCCTTGATGAATCTGATAAGCTATTTGAGCCACAATTGTTCAAGCAGATTGATTCTATTATCAAAGCATGCACAAACCCCTCAATAATACGCTCTCTTTTTAGTGCTACTTTACCTGATTTTGTTGAAGATCGAGCTCGAGAACTCATGCATGATGCTGTTCGCGTAATCGTTGGCAGGAAGAATATGGCTTCTGATACAATTAAGCAAAAGTTAGTTTTTACCGGAAGTGAAGAAGGAAAACTTCTCGCAATTCGGCAAAGTTTTGCAGAGAGTCTAAATCCTCCAGTATTGGTCTTTCTCCAAAGCAAGGAGCGCGCCAAGGAGCTGTATGGGGAACTTGCATTCGACAATATTAGAGTTGATGTCATCCATTCTGATTTGTCTCAAGAAGAGCGAGAAAATGCAGTTGACAACTTCAGAGCTGGTAAAACATGGGTTTTGATTGCCACTGACGTGGTTGCTCGGGGAATGGATTTCAAAGGCATAAACTGCGTGATCAATTATGATTTCCCAGATTCTGCATCAGCATATATCCACAGAATTGGTCGTTCTGGCAGAGCAGGGAGGAGTGGCGAAGCGATTACATTTTACACAGAGGAGGACATTCCATTCCTGCGGAATGTATCTAATCTAATGGCATCCTCAGGCTGTGAAGTTCCATCTTGGTTGACGGAGTTGCAGTTGCAGAAGAAGAAGTGGAAGAAGCACCGACCTGAGAGAGATTCTATCTCAACCAAACCGGATCTACCCAAAAGTGATTCAATCTCAACCAAACCGAAGTTGCAGAAGAAGTTGAAGAAGCACCAACCCAAAAAAGATTCTATCGTAACCAAACCGGATCTACCCAAAAGTGATTCGATCTCAACCAAACCGAAGTTGCAGAAGAAGTTGAAGAAGCACCGACCCAAAAAAGATTCTATCGTAACCAAACCGGATCTACCCAAAAGAGATTCTATCTAA
Protein sequence

>Msa0968340

MASDSSFLFAGIHFDRKKFGADIARFQKKDTDNSLAKIQTVTEDEESKETTEAVTGKKRKRKKTSSEAVDGFSVFRSSTSKSNEEGQADDNDESIRLKKEQNKQLERDAIFRKNHNIHVSGYNVPSPLQSFDELKTRTWIQRTNTNPTAGYSGTLTGMDCIGYYILQKVVADRECFACAPTGSGKTLAFVCPMLMKLKAHAKGGVRAVIICHSRELSGQTYRECKKLAKGEKFRIKLMTKNLLRNADFSKFSCDILISTPLRLCLAIKRKKVDLSRVEYLVLDESDKLFEPQLFKQIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEEDIPFLRNVSNLMASSGCEVPSWLTELQLQKKKWKKHRPERDSISTKPDLPKSDSISTKPKLQKKLKKHQPKKDSIVTKPDLPKSDSISTKPKLQKKLKKHRPKKDSIVTKPDLPKRDSI*