AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1426050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1426050 MtrunA17_Chr7g0263771 92.105 608 29 3 1 600 1 597 0.0 1121
Msa1426050 MtrunA17_Chr7g0270131 33.886 422 263 9 106 518 207 621 2.05e-62 220
Msa1426050 MtrunA17_Chr3g0121351 30.263 456 273 10 81 507 98 537 2.62e-62 216
Msa1426050 MtrunA17_Chr4g0076491 31.954 435 261 11 106 513 262 688 3.53e-55 199
Msa1426050 MtrunA17_Chr1g0176041 29.844 449 271 9 85 505 111 543 3.88e-55 197
Msa1426050 MtrunA17_Chr6g0449741 30.924 498 282 15 45 513 184 648 6.21e-55 197
Msa1426050 MtrunA17_Chr2g0330401 30.879 421 243 11 111 507 77 473 6.09e-54 191
Msa1426050 MtrunA17_Chr4g0063551 30.942 446 257 10 117 522 127 561 1.39e-53 194
Msa1426050 MtrunA17_Chr6g0449911 32.339 436 263 15 88 507 122 541 2.59e-52 191
Msa1426050 MtrunA17_Chr3g0107851 30.569 422 256 12 96 494 82 489 3.83e-51 185
Msa1426050 MtrunA17_Chr1g0200181 32.009 428 238 13 110 507 125 529 1.27e-50 184
Msa1426050 MtrunA17_Chr1g0157691 30.913 427 244 11 110 507 127 531 4.63e-50 182
Msa1426050 MtrunA17_Chr4g0040761 33.065 372 208 9 121 486 37 373 1.31e-47 178
Msa1426050 MtrunA17_Chr2g0277821 30.896 424 273 9 95 507 469 883 2.27e-47 179
Msa1426050 MtrunA17_Chr2g0293631 31.347 386 238 11 110 482 476 847 3.04e-46 176
Msa1426050 MtrunA17_Chr2g0297261 32.070 343 225 4 169 507 67 405 4.87e-46 167
Msa1426050 MtrunA17_Chr6g0461751 27.739 429 279 11 110 518 121 538 7.87e-42 158
Msa1426050 MtrunA17_Chr1g0149251 33.230 322 201 9 179 491 7 323 1.82e-40 150
Msa1426050 MtrunA17_Chr7g0271121 31.214 346 220 8 165 499 135 473 1.13e-39 155
Msa1426050 MtrunA17_Chr3g0098121 28.133 391 228 10 118 495 167 517 1.16e-39 155
Msa1426050 MtrunA17_Chr3g0095031 31.373 357 220 13 165 506 119 465 1.65e-39 152
Msa1426050 MtrunA17_Chr2g0300291 28.238 386 229 9 121 495 159 507 4.16e-39 153
Msa1426050 MtrunA17_Chr5g0409981 30.709 381 244 9 173 537 139 515 7.85e-39 150
Msa1426050 MtrunA17_Chr1g0193491 29.674 337 221 8 155 479 133 465 8.99e-39 151
Msa1426050 MtrunA17_Chr4g0003441 33.010 309 194 8 179 479 151 454 3.23e-38 147
Msa1426050 MtrunA17_Chr4g0070981 30.205 341 214 6 179 507 84 412 5.41e-38 145
Msa1426050 MtrunA17_Chr2g0329931 30.000 340 216 5 179 507 84 412 1.06e-37 144
Msa1426050 MtrunA17_Chr2g0299681 30.205 341 214 6 179 507 84 412 1.94e-37 144
Msa1426050 MtrunA17_Chr8g0342861 28.916 332 230 4 179 507 84 412 3.13e-36 140
Msa1426050 MtrunA17_Chr5g0443991 28.541 473 274 16 166 591 106 561 3.03e-35 141
Msa1426050 MtrunA17_Chr2g0310581 28.446 341 233 7 161 493 78 415 3.77e-35 139
Msa1426050 MtrunA17_Chr5g0442191 27.089 347 238 9 165 501 110 451 8.47e-35 139
Msa1426050 MtrunA17_Chr7g0247191 29.167 336 230 6 174 506 188 518 2.22e-34 137
Msa1426050 MtrunA17_Chr7g0236841 30.205 341 218 9 173 502 47 378 2.71e-34 135
Msa1426050 MtrunA17_Chr6g0475251 30.159 315 201 6 179 478 146 456 3.10e-34 138
Msa1426050 MtrunA17_Chr6g0483491 30.205 341 218 9 173 502 47 378 6.90e-34 134
Msa1426050 MtrunA17_Chr3g0114081 31.176 340 201 10 179 487 59 396 1.10e-33 135
Msa1426050 MtrunA17_Chr7g0247221 28.358 335 234 5 174 506 181 511 1.64e-33 134
Msa1426050 MtrunA17_Chr7g0247181 28.358 335 234 5 174 506 178 508 2.52e-33 134
Msa1426050 MtrunA17_Chr4g0034411 27.542 472 280 15 166 591 106 561 1.44e-32 133
Msa1426050 MtrunA17_Chr4g0058591 28.000 350 208 12 111 438 183 510 9.92e-32 129
Msa1426050 MtrunA17_Chr1g0204391 30.973 339 183 13 179 478 87 413 2.53e-31 128
Msa1426050 MtrunA17_Chr4g0062301 29.129 333 218 11 169 487 130 458 8.45e-31 127
Msa1426050 MtrunA17_Chr2g0307471 27.660 376 254 10 124 487 82 451 1.93e-30 125
Msa1426050 MtrunA17_Chr8g0347151 30.563 373 216 12 149 492 218 576 3.08e-30 125
Msa1426050 MtrunA17_Chr8g0347161 27.235 481 288 18 56 492 15 477 3.68e-29 122
Msa1426050 MtrunA17_Chr1g0179761 29.464 336 207 9 173 481 120 452 8.43e-28 117
Msa1426050 MtrunA17_Chr8g0347171 25.690 471 304 13 56 492 77 535 1.10e-27 118
Msa1426050 MtrunA17_Chr7g0236831 25.740 439 215 13 117 479 177 580 5.02e-27 116
Msa1426050 MtrunA17_Chr1g0192021 27.764 407 233 12 161 512 51 451 2.97e-26 113
Msa1426050 MtrunA17_Chr8g0386451 27.346 373 230 11 148 492 304 663 3.99e-26 113
Msa1426050 MtrunA17_Chr3g0145781 26.404 356 225 12 169 489 165 518 4.31e-26 112
Msa1426050 MtrunA17_Chr6g0466611 25.862 348 233 10 156 482 165 508 1.08e-25 112
Msa1426050 MtrunA17_Chr3g0137901 47.368 114 59 1 377 489 44 157 1.30e-25 103
Msa1426050 MtrunA17_Chr4g0029191 24.069 403 220 11 169 489 78 476 1.54e-24 108
Msa1426050 MtrunA17_Chr2g0301281 23.325 403 223 11 169 489 75 473 2.36e-24 107
Msa1426050 MtrunA17_Chr8g0342851 26.727 333 208 8 180 507 17 318 5.19e-23 100
Msa1426050 MtrunA17_Chr4g0004301 25.587 383 208 13 172 483 69 445 1.11e-22 101
Msa1426050 MtrunA17_Chr5g0434301 25.587 383 208 13 172 483 69 445 1.20e-22 101
Msa1426050 MtrunA17_Chr2g0309551 23.896 385 224 7 169 489 142 521 1.36e-21 99.0
Msa1426050 MtrunA17_Chr4g0025141 32.258 186 106 5 313 481 18 200 2.67e-18 84.7
Msa1426050 MtrunA17_Chr4g0074521 26.648 364 201 17 155 467 93 441 1.19e-17 86.3
Msa1426050 MtrunA17_Chr1g0169331 27.586 261 178 6 255 507 140 397 1.26e-17 85.5
Msa1426050 MtrunA17_Chr8g0354761 20.561 321 242 5 177 486 49 367 1.61e-16 82.4
Msa1426050 MtrunA17_Chr4g0058601 43.478 69 39 0 439 507 9 77 7.55e-14 68.6
Msa1426050 MtrunA17_Chr5g0429221 28.438 320 198 11 174 477 42 346 9.15e-14 73.6
Msa1426050 MtrunA17_Chr4g0025101 34.513 113 59 2 409 506 90 202 1.49e-12 67.4
Msa1426050 MtrunA17_Chr8g0377041 23.481 362 236 12 166 507 285 625 5.73e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1426050 AT3G09720.2 62.613 551 178 7 1 535 1 539 0.0 654
Msa1426050 AT3G09720.1 62.613 551 178 7 1 535 1 539 0.0 654
Msa1426050 AT2G47330.1 33.254 418 254 8 111 515 210 615 1.60e-62 220
Msa1426050 AT5G63120.2 31.829 421 243 10 109 507 145 543 3.42e-58 205
Msa1426050 AT2G33730.1 31.957 460 266 12 106 536 289 730 1.11e-56 204
Msa1426050 AT3G58510.1 30.493 446 264 11 88 505 112 539 2.51e-56 201
Msa1426050 AT3G58510.3 30.493 446 264 11 88 505 112 539 2.51e-56 201
Msa1426050 AT3G58510.2 30.493 446 264 11 88 505 112 539 2.51e-56 201
Msa1426050 AT3G58570.1 32.374 417 240 10 117 505 134 536 1.04e-55 199
Msa1426050 AT2G42520.2 30.201 447 264 10 89 505 121 549 1.43e-55 199
Msa1426050 AT2G42520.1 30.201 447 264 10 89 505 121 549 1.43e-55 199
Msa1426050 AT2G42520.3 30.201 447 264 10 89 505 121 549 1.43e-55 199
Msa1426050 AT1G55150.1 30.825 412 241 10 111 500 81 470 4.25e-55 195
Msa1426050 AT1G55150.2 30.825 412 241 10 111 500 106 495 3.03e-54 193
Msa1426050 AT5G14610.6 30.649 447 278 13 77 507 108 538 5.28e-51 186
Msa1426050 AT5G14610.2 30.649 447 278 13 77 507 108 538 5.41e-51 186
Msa1426050 AT3G01540.4 30.073 409 261 10 111 507 140 535 7.22e-51 186
Msa1426050 AT3G01540.2 30.073 409 261 10 111 507 140 535 7.22e-51 186
Msa1426050 AT3G01540.3 30.073 409 261 10 111 507 140 535 7.22e-51 186
Msa1426050 AT5G51280.1 31.567 434 259 12 95 507 115 531 7.56e-51 185
Msa1426050 AT3G01540.1 30.073 409 261 10 111 507 140 535 8.18e-51 186
Msa1426050 AT5G14610.5 30.649 447 278 13 77 507 116 546 8.57e-51 186
Msa1426050 AT3G06480.1 30.993 413 258 11 110 509 416 814 1.11e-49 186
Msa1426050 AT1G77030.1 33.422 377 206 10 121 489 47 386 1.97e-49 184
Msa1426050 AT4G33370.1 30.233 430 270 11 95 507 66 482 1.92e-48 177
Msa1426050 AT1G20920.4 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa1426050 AT1G20920.6 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa1426050 AT1G20920.3 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa1426050 AT1G20920.7 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa1426050 AT1G20920.5 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa1426050 AT1G20920.1 31.373 408 260 9 111 507 511 909 9.62e-48 180
Msa1426050 AT1G20920.2 31.373 408 260 9 111 507 173 571 2.51e-47 178
Msa1426050 AT5G14610.7 29.594 419 238 14 104 507 31 407 2.15e-46 171
Msa1426050 AT5G14610.3 29.594 419 238 14 104 507 31 407 2.15e-46 171
Msa1426050 AT5G14610.1 29.630 405 229 13 117 507 244 606 3.73e-45 171
Msa1426050 AT3G19760.1 29.912 341 235 3 169 507 69 407 1.44e-43 161
Msa1426050 AT1G28180.1 32.416 327 193 9 173 482 11 326 5.67e-41 153
Msa1426050 AT3G09620.2 29.454 421 226 13 104 501 370 742 2.47e-40 158
Msa1426050 AT3G09620.1 29.454 421 226 13 104 501 369 741 2.51e-40 158
Msa1426050 AT1G51380.1 29.825 342 236 3 166 505 53 392 6.76e-40 150
Msa1426050 AT5G11170.2 32.573 307 194 8 179 477 7 308 8.94e-39 146
Msa1426050 AT1G31970.1 31.234 381 243 9 173 537 152 529 1.20e-38 150
Msa1426050 AT5G26742.1 31.373 357 205 12 165 498 132 471 1.43e-38 152
Msa1426050 AT5G26742.2 31.373 357 205 12 165 498 132 471 1.44e-38 152
Msa1426050 AT5G26742.3 31.285 358 206 12 165 499 39 379 1.91e-38 150
Msa1426050 AT3G02065.3 26.353 425 286 10 110 518 89 502 3.65e-38 148
Msa1426050 AT3G02065.2 26.353 425 286 10 110 518 89 502 3.65e-38 148
Msa1426050 AT5G11170.1 32.573 307 194 8 179 477 90 391 4.94e-38 146
Msa1426050 AT5G11200.1 32.573 307 194 8 179 477 90 391 4.94e-38 146
Msa1426050 AT3G13920.4 27.751 418 258 9 102 507 21 406 1.88e-37 144
Msa1426050 AT3G02065.1 27.095 358 246 6 173 518 11 365 3.63e-37 142
Msa1426050 AT3G53110.1 29.545 352 228 8 173 506 132 481 5.59e-37 144
Msa1426050 AT3G22330.1 28.650 363 222 11 165 506 134 480 7.49e-37 145
Msa1426050 AT1G54270.2 27.949 390 248 7 129 507 39 406 1.32e-36 141
Msa1426050 AT3G13920.1 29.706 340 217 5 179 507 83 411 1.51e-36 141
Msa1426050 AT3G13920.3 29.003 331 231 3 179 507 73 401 1.82e-36 141
Msa1426050 AT4G16630.1 29.429 333 221 8 173 495 205 533 2.50e-36 145
Msa1426050 AT1G54270.1 28.701 331 232 3 179 507 83 411 3.85e-36 140
Msa1426050 AT3G22310.2 28.011 357 232 9 165 506 146 492 4.20e-36 143
Msa1426050 AT3G22310.1 28.011 357 232 9 165 506 146 492 4.78e-36 143
Msa1426050 AT1G72730.1 29.326 341 217 6 179 507 85 413 7.74e-36 139
Msa1426050 AT1G16280.1 29.762 336 221 8 164 489 87 417 1.52e-35 140
Msa1426050 AT3G18600.1 28.097 331 227 7 166 487 120 448 2.58e-35 140
Msa1426050 AT3G13920.5 29.739 306 211 3 179 482 87 390 2.64e-35 138
Msa1426050 AT3G13920.2 29.739 306 211 3 179 482 83 386 2.96e-35 138
Msa1426050 AT4G00660.1 30.794 315 212 5 170 482 166 476 7.83e-35 138
Msa1426050 AT4G00660.2 30.794 315 212 5 170 482 166 476 7.83e-35 138
Msa1426050 AT5G11200.3 29.855 345 194 8 179 477 90 432 1.09e-34 137
Msa1426050 AT5G63120.3 28.969 359 209 11 109 445 145 479 4.42e-34 135
Msa1426050 AT5G63120.4 28.969 359 209 11 109 445 145 479 4.42e-34 135
Msa1426050 AT5G63120.5 28.969 359 209 11 109 445 145 479 4.42e-34 135
Msa1426050 AT5G63120.1 28.852 357 210 10 109 443 145 479 4.46e-34 135
Msa1426050 AT5G14610.4 29.383 405 249 15 77 465 116 499 3.08e-33 134
Msa1426050 AT5G54910.1 32.710 321 196 11 173 479 109 423 7.72e-33 134
Msa1426050 AT5G60990.1 28.242 347 227 8 173 502 47 388 2.78e-32 130
Msa1426050 AT2G45810.1 29.808 312 211 6 174 482 193 499 9.70e-32 129
Msa1426050 AT3G61240.2 29.073 313 212 7 174 482 163 469 6.41e-31 127
Msa1426050 AT3G61240.1 29.073 313 212 7 174 482 163 469 6.41e-31 127
Msa1426050 AT3G06480.2 29.345 351 221 11 110 447 416 752 7.41e-31 129
Msa1426050 AT5G05450.1 32.647 340 193 11 179 487 60 394 1.17e-30 127
Msa1426050 AT2G40700.1 26.959 434 207 13 169 511 65 479 1.32e-30 127
Msa1426050 AT5G65900.1 28.228 333 219 10 169 487 188 514 9.85e-30 124
Msa1426050 AT5G62190.1 30.312 320 194 10 179 478 140 450 6.70e-29 122
Msa1426050 AT1G71370.1 29.121 364 221 12 155 487 28 385 8.33e-29 121
Msa1426050 AT5G63630.1 29.268 369 226 13 149 492 72 430 5.09e-27 115
Msa1426050 AT5G63630.2 29.301 372 222 12 149 492 266 624 6.36e-27 116
Msa1426050 AT5G08610.1 26.870 361 231 9 158 492 405 758 1.72e-26 115
Msa1426050 AT3G06980.1 26.316 361 218 13 169 489 408 760 1.91e-26 115
Msa1426050 AT5G08620.1 27.147 361 230 9 158 492 103 456 4.96e-26 112
Msa1426050 AT1G63250.1 28.125 352 223 10 166 492 359 705 7.22e-26 113
Msa1426050 AT4G09730.1 26.050 357 221 12 156 482 136 479 1.49e-25 112
Msa1426050 AT2G07750.1 28.286 350 225 11 166 492 406 752 1.42e-24 109
Msa1426050 AT4G15850.1 24.747 396 219 11 172 497 72 458 7.70e-24 105
Msa1426050 AT5G11200.2 49.505 101 51 0 377 477 350 450 7.68e-23 102
Msa1426050 AT4G34910.1 26.526 426 240 14 129 495 46 457 6.43e-22 100
Msa1426050 AT1G12770.2 26.158 367 201 9 181 483 156 516 2.48e-21 98.6
Msa1426050 AT1G12770.1 26.158 367 201 9 181 483 156 516 2.48e-21 98.6
Msa1426050 AT5G19210.2 27.003 337 202 13 166 467 107 434 6.23e-19 90.5
Msa1426050 AT3G16840.1 38.000 100 62 0 378 477 506 605 3.69e-15 79.7
Msa1426050 AT3G16840.2 38.000 100 62 0 378 477 507 606 3.82e-15 79.7
Msa1426050 AT5G19210.1 26.667 240 141 10 255 467 46 277 6.11e-12 67.4
Msa1426050 AT5G19210.3 26.667 240 141 10 255 467 46 277 6.11e-12 67.4
Msa1426050 AT1G51380.2 24.779 226 166 3 166 389 53 276 6.60e-11 63.9
Msa1426050 AT1G59990.2 29.545 176 117 3 313 482 357 531 7.53e-11 65.5
Msa1426050 AT1G59990.1 29.545 176 117 3 313 482 357 531 7.95e-11 65.5

Find 156 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATAAATCAGACATTTA+AGG 0.227008 tig0025942:-12556 None:intergenic
TATATCATGGTTTAAGCTTC+TGG 0.227067 tig0025942:-12417 None:intergenic
TGGGAATCACTTCAGGAATA+TGG 0.232031 tig0025942:+10440 Msa1426050:intron
GGTTGAGATCGAATCACTTT+TGG 0.256333 tig0025942:-12112 None:intergenic
GGTTGAGATTGAATCACTTT+TGG 0.259344 tig0025942:-12016 None:intergenic
GGCTATTCCGGTACTCTTAC+AGG 0.289330 tig0025942:+8747 Msa1426050:CDS
TTTAAGCTTCTGGAAGTATT+AGG 0.291904 tig0025942:-12407 None:intergenic
TTGTTCTTTCTTCAGCCTAA+TGG 0.302605 tig0025942:-8318 None:intergenic
TTTGGCTATCAAGAGGAAAA+AGG 0.315999 tig0025942:+9262 Msa1426050:CDS
CGCCGATATTGCACGCTTCC+AGG 0.317355 tig0025942:+7855 Msa1426050:CDS
TTTATAAATCAGACATTTAA+GGG 0.327898 tig0025942:-12555 None:intergenic
TGTTTAGATAGAATCTCTTT+TGG 0.331538 tig0025942:-12208 None:intergenic
GGTGTTAGGCCTAACAAATC+TGG 0.332763 tig0025942:+7646 None:intergenic
GCTTGTGCCCCAACTGGCTC+TGG 0.345576 tig0025942:+8919 Msa1426050:CDS
AATCTTCGCCAAACTGTTAT+CGG 0.349062 tig0025942:-8030 None:intergenic
TGTCATAGCCGTGAATTATC+TGG 0.356260 tig0025942:+9101 Msa1426050:CDS
CTTTGGAGAAAGACCAATAC+TGG 0.359443 tig0025942:-10905 None:intergenic
CACGCCACTTCGATTATGTT+TGG 0.360066 tig0025942:+9244 Msa1426050:CDS
TACCTGGAAGCGTGCAATAT+CGG 0.365628 tig0025942:-7857 None:intergenic
CTTCTTCTGCAACTTCGGTT+TGG 0.369457 tig0025942:-12037 None:intergenic
CTTCTTCTGCAACTTCGGTT+TGG 0.369457 tig0025942:-12133 None:intergenic
CCAAGTGGTCTCTTATTAAA+CGG 0.369668 tig0025942:+12488 Msa1426050:three_prime_UTR
TAAAATGTAAGAGAAATAAT+TGG 0.370634 tig0025942:-12700 None:intergenic
AAGCGCAAGAAAACCTCTTC+TGG 0.373554 tig0025942:+8116 Msa1426050:CDS
TTCAACTTCTTCTGCAACTT+CGG 0.380856 tig0025942:-12042 None:intergenic
TTCAACTTCTTCTGCAACTT+CGG 0.380856 tig0025942:-12138 None:intergenic
TGTTGACAGTAAACCCGTTC+GGG 0.381859 tig0025942:-7679 None:intergenic
TGGGTTATTGTGACCCGAAC+GGG 0.393459 tig0025942:+7666 Msa1426050:five_prime_UTR
CTGCAACCGTACTATCAATA+TGG 0.393516 tig0025942:+7777 Msa1426050:exon
ATACACTACATAAATCATAA+TGG 0.399100 tig0025942:-12676 None:intergenic
TGCCACTGACGTGGTTGCTC+GGG 0.403642 tig0025942:+11540 Msa1426050:CDS
CACAATAACCCAGATTTGTT+AGG 0.408461 tig0025942:-7655 None:intergenic
CTGTTGACAGTAAACCCGTT+CGG 0.409236 tig0025942:-7680 None:intergenic
TACACTACATAAATCATAAT+GGG 0.410874 tig0025942:-12675 None:intergenic
ATATATGCTGATGCAGAATC+TGG 0.416570 tig0025942:-11607 None:intergenic
AAAAGATACCGATAACAGTT+TGG 0.419073 tig0025942:+8022 Msa1426050:CDS
GCTCGATCTTCAACAAAATC+AGG 0.420958 tig0025942:-10276 None:intergenic
TTGGCCTTCTTCGTTTGACT+TGG 0.421646 tig0025942:-8276 None:intergenic
GCGGAATGTATCTAATCTAA+TGG 0.429818 tig0025942:+11882 Msa1426050:CDS
TCAGCATATATCCACAGAAT+TGG 0.430225 tig0025942:+11619 Msa1426050:CDS
AAGTATTAGGCAACATTGCC+TGG 0.432193 tig0025942:-12394 None:intergenic
CAGGCTGTGAAGTTCCATCT+TGG 0.434891 tig0025942:+11911 Msa1426050:CDS
GAGCGCGCCAAGGAGCTGTA+TGG 0.436091 tig0025942:+10932 Msa1426050:CDS
TTGTCACAGGCTTATAGATC+CGG 0.437316 tig0025942:-12233 None:intergenic
CATTTCGATAGAAAGAAATT+CGG 0.439042 tig0025942:+7832 Msa1426050:CDS
AAGGAAAACTTCTCGCAATT+CGG 0.440671 tig0025942:+10508 Msa1426050:CDS
GTCCCATTCTCTGTTGTCAC+AGG 0.444984 tig0025942:-12246 None:intergenic
CAAGTGGTCTCTTATTAAAC+GGG 0.454110 tig0025942:+12489 Msa1426050:three_prime_UTR
TGACGTGGTTGCTCGGGGAA+TGG 0.461021 tig0025942:+11546 Msa1426050:CDS
ATAGGTCGTTCTGGCAGAGC+AGG 0.461719 tig0025942:+11808 Msa1426050:intron
TGGGGATGGCACATTGTAAC+CGG 0.462627 tig0025942:-8506 None:intergenic
AATCCAACAGCAGGCTATTC+CGG 0.467878 tig0025942:+8735 Msa1426050:CDS
ATGATAATGATGAGTCCATT+AGG 0.468307 tig0025942:+8303 Msa1426050:CDS
GGCAACTGGCATGAAGGTAC+TGG 0.470116 tig0025942:-12447 None:intergenic
TTCCGGTACTCTTACAGGTA+TGG 0.473752 tig0025942:+8752 Msa1426050:CDS
AAGCCTGTGACAACAGAGAA+TGG 0.475748 tig0025942:+12243 Msa1426050:three_prime_UTR
TCTACAATGAGGGTGGCAAC+TGG 0.480328 tig0025942:-12461 None:intergenic
TACCTTGAGCTTCATGAGCA+TGG 0.484347 tig0025942:-8965 None:intergenic
CTTTCTATCGAAATGAATAC+CGG 0.484435 tig0025942:-7824 None:intergenic
AAAAGAGAGCGTATTATTGA+GGG 0.484779 tig0025942:-10240 None:intergenic
TTGCCACTGACGTGGTTGCT+CGG 0.486481 tig0025942:+11539 Msa1426050:CDS
ATGTTTGACCAGATAATTCA+CGG 0.486895 tig0025942:-9109 None:intergenic
TACTGGATATGATTATATCA+TGG 0.487584 tig0025942:-12430 None:intergenic
GCCTGCTGTTGGATTGGTGT+TGG 0.489600 tig0025942:-8727 None:intergenic
CCGTTTAATAAGAGACCACT+TGG 0.490288 tig0025942:-12488 None:intergenic
GCTTTCTTCATCTTCTGTCA+CGG 0.491976 tig0025942:-8057 None:intergenic
TGAAGTTCCATCTTGGTTGA+CGG 0.493312 tig0025942:+11918 Msa1426050:CDS
GAGATTCTATCTAAACAAAC+CGG 0.500347 tig0025942:+12214 Msa1426050:exon
TGCAGTTGCAGAAGAAGAAG+TGG 0.501233 tig0025942:+11944 Msa1426050:CDS
TTCTTCGTTTGACTTGGATG+TGG 0.502330 tig0025942:-8270 None:intergenic
AATCATAACATTCATGTCTC+CGG 0.506996 tig0025942:+8487 Msa1426050:CDS
ACCTTGAGCTTCATGAGCAT+GGG 0.507753 tig0025942:-8964 None:intergenic
GCGTCGAAGGGAAAGTGCTC+AGG 0.511958 tig0025942:+7727 Msa1426050:five_prime_UTR
AGATTCTATCGTAACCAAAC+CGG 0.516142 tig0025942:+12083 Msa1426050:CDS
AGATTCTATCGTAACCAAAC+CGG 0.516142 tig0025942:+12179 Msa1426050:CDS
AGATTCTATCTCAACCAAAC+CGG 0.517381 tig0025942:+11987 Msa1426050:CDS
TTCTGATTTGTCTCAAGAAG+AGG 0.518272 tig0025942:+10994 Msa1426050:CDS
AGCCTGTGACAACAGAGAAT+GGG 0.521349 tig0025942:+12244 Msa1426050:three_prime_UTR
AGACTGAGTGGCAAGTGTCC+AGG 0.524908 tig0025942:+12376 Msa1426050:three_prime_UTR
TGAATAAAAGAAGCTGTTGA+CGG 0.525694 tig0025942:+8227 Msa1426050:intron
CTTCTTGAGACAAATCAGAA+TGG 0.526964 tig0025942:-10991 None:intergenic
CGCTCGCCATATTGATAGTA+CGG 0.527691 tig0025942:-7783 None:intergenic
GTAGAAGTGAGAAGCGTCGA+AGG 0.529783 tig0025942:+7714 Msa1426050:five_prime_UTR
GTTGAGATAGAATCTCTCTC+AGG 0.530892 tig0025942:-11979 None:intergenic
AACTCATCAAAGCTTTGAAG+TGG 0.536342 tig0025942:-8526 None:intergenic
CTTACAGGTATGGATTGCAT+TGG 0.538662 tig0025942:+8762 Msa1426050:CDS
TCAATCTGCTTGAACAATTG+TGG 0.538744 tig0025942:-10192 None:intergenic
GTACCGGAATAGCCTGCTGT+TGG 0.541486 tig0025942:-8738 None:intergenic
TTGACTTGGATGTGGAACTT+CGG 0.542071 tig0025942:-8262 None:intergenic
TTAGATACATTCCGCAGGAA+TGG 0.543864 tig0025942:-11874 None:intergenic
ACCAACACCAATCCAACAGC+AGG 0.544241 tig0025942:+8726 Msa1426050:CDS
ACATCCAAGTCAAACGAAGA+AGG 0.545796 tig0025942:+8272 Msa1426050:CDS
TGCAACTCCGTCAACCAAGA+TGG 0.545864 tig0025942:-11925 None:intergenic
TCTAATCTAATGGCATCCTC+AGG 0.546601 tig0025942:+11892 Msa1426050:CDS
ATCCATACCTGTAAGAGTAC+CGG 0.548223 tig0025942:-8754 None:intergenic
GAGAATGTGAATACCAGAAG+AGG 0.549968 tig0025942:-8129 None:intergenic
GAAACAACAGAAGCTGTGAC+TGG 0.551078 tig0025942:+8083 Msa1426050:CDS
TTACCGTCGTTCACTTGTTG+CGG 0.553156 tig0025942:-7754 None:intergenic
GAGTCTAAATCCTCCAGTAT+TGG 0.555145 tig0025942:+10892 Msa1426050:intron
ATATAGCTTTCATCGCGGTA+TGG 0.558314 tig0025942:+12622 Msa1426050:three_prime_UTR
ACTTCAGAGCTGGTAAAACA+TGG 0.559121 tig0025942:+11509 Msa1426050:CDS
GGGCACAAGCAAAACATTCA+CGG 0.561048 tig0025942:-8906 None:intergenic
CCAAAGCAAGGAGCGCGCCA+AGG 0.562955 tig0025942:+10922 Msa1426050:CDS
CTGTTCGCGTAATCGTTGGC+AGG 0.566120 tig0025942:+10319 Msa1426050:CDS
ACTCATCATTATCATCGGCT+TGG 0.571703 tig0025942:-8295 None:intergenic
GCAGTTGACAACTTCAGAGC+TGG 0.572600 tig0025942:+11499 Msa1426050:CDS
CTGGGTTATTGTGACCCGAA+CGG 0.572858 tig0025942:+7665 Msa1426050:five_prime_UTR
ACTCATCAAAGCTTTGAAGT+GGG 0.573310 tig0025942:-8525 None:intergenic
GAGGGTGGCAACTGGCATGA+AGG 0.574374 tig0025942:-12453 None:intergenic
TCAAAGCTTTGAAGTGGGGA+TGG 0.574572 tig0025942:-8520 None:intergenic
GGAATAGCCTGCTGTTGGAT+TGG 0.575000 tig0025942:-8733 None:intergenic
GACAGAAGATGAAGAAAGCA+AGG 0.579533 tig0025942:+8061 Msa1426050:CDS
TCCCCGAGCAACCACGTCAG+TGG 0.581927 tig0025942:-11542 None:intergenic
GCCACTGACGTGGTTGCTCG+GGG 0.585127 tig0025942:+11541 Msa1426050:CDS
TCTGGCAGAGCAGGGAGGAG+TGG 0.586378 tig0025942:+11817 Msa1426050:CDS
GATGCTGTTCGCGTAATCGT+TGG 0.587216 tig0025942:+10315 Msa1426050:CDS
GCTCGGGGAATGGATTTCAA+AGG 0.589155 tig0025942:+11556 Msa1426050:CDS
GTGTTAGGCCTAACAAATCT+GGG 0.591435 tig0025942:+7647 None:intergenic
TCCCATGCTCATGAAGCTCA+AGG 0.592058 tig0025942:+8963 Msa1426050:CDS
TAGCTTTCATCGCGGTATGG+TGG 0.593143 tig0025942:+12625 Msa1426050:three_prime_UTR
AATGGACTCATCATTATCAT+CGG 0.593722 tig0025942:-8300 None:intergenic
ATTGGTCTTTCTCCAAAGCA+AGG 0.593737 tig0025942:+10910 Msa1426050:CDS
GATTATGTTTGGCTATCAAG+AGG 0.596091 tig0025942:+9255 Msa1426050:CDS
TATATGCTGATGCAGAATCT+GGG 0.604076 tig0025942:-11606 None:intergenic
ATAGCTTATCAGATTCATCA+AGG 0.608799 tig0025942:-10164 None:intergenic
ACGGCTATGACAAATGATAA+CGG 0.609192 tig0025942:-9090 None:intergenic
TTAGATTAGATACATTCCGC+AGG 0.611279 tig0025942:-11879 None:intergenic
CTCATCAAAGCTTTGAAGTG+GGG 0.611595 tig0025942:-8524 None:intergenic
AAAGAGAGCGTATTATTGAG+GGG 0.614818 tig0025942:-10239 None:intergenic
AAGTTCCCCATACAGCTCCT+TGG 0.617887 tig0025942:-10939 None:intergenic
GCGCGCCAAGGAGCTGTATG+GGG 0.620211 tig0025942:+10934 Msa1426050:CDS
GCATGGGACACACAAATGCA+AGG 0.627419 tig0025942:-8948 None:intergenic
CACTTGGGTTGTCTACAATG+AGG 0.631532 tig0025942:-12472 None:intergenic
AGATGGAACTTCACAGCCTG+AGG 0.632977 tig0025942:-11908 None:intergenic
TAGAAGTGAGAAGCGTCGAA+GGG 0.634143 tig0025942:+7715 Msa1426050:five_prime_UTR
ACTTGGGTTGTCTACAATGA+GGG 0.635609 tig0025942:-12471 None:intergenic
TACATGTTCACTACAACGAG+AGG 0.636983 tig0025942:-12522 None:intergenic
TTATAGGCTCATGCAAAAGG+CGG 0.637468 tig0025942:+9059 Msa1426050:intron
TAGGTCGTTCTGGCAGAGCA+GGG 0.637904 tig0025942:+11809 Msa1426050:intron
ATAGCCAAACATAATCGAAG+TGG 0.642804 tig0025942:-9248 None:intergenic
CATGGCACTAACCAATTCTG+TGG 0.643275 tig0025942:-11630 None:intergenic
GCTTTGATGAGTTGAAAACA+AGG 0.652593 tig0025942:+8536 Msa1426050:CDS
CTTCAGAGCTGGTAAAACAT+GGG 0.653708 tig0025942:+11510 Msa1426050:CDS
CGTTTAATAAGAGACCACTT+GGG 0.662998 tig0025942:-12487 None:intergenic
CATGGGACACACAAATGCAA+GGG 0.670275 tig0025942:-8947 None:intergenic
AAGCTGTGACTGGAAAGAAG+AGG 0.671292 tig0025942:+8093 Msa1426050:CDS
AGGAGGACATTCCATTCCTG+CGG 0.677331 tig0025942:+11863 Msa1426050:CDS
CTCATTGTAGACAACCCAAG+TGG 0.677545 tig0025942:+12473 Msa1426050:three_prime_UTR
CAAACATAATCGAAGTGGCG+TGG 0.678226 tig0025942:-9243 None:intergenic
AGAACAAAATAAGCAACTCG+AGG 0.678710 tig0025942:+8334 Msa1426050:CDS
AGATAGAATCTCTCTCAGGT+CGG 0.683000 tig0025942:-11975 None:intergenic
TGGGTTGTCTACAATGAGGG+TGG 0.686123 tig0025942:-12468 None:intergenic
TGGAGAAAGACCAATACTGG+AGG 0.691845 tig0025942:-10902 None:intergenic
GTCGTTCTGGCAGAGCAGGG+AGG 0.714057 tig0025942:+11812 Msa1426050:CDS
CAGCCGCAACAAGTGAACGA+CGG 0.758158 tig0025942:+7751 Msa1426050:five_prime_UTR
TTGTGATATAGCTTTCATCG+CGG 0.767306 tig0025942:+12617 Msa1426050:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGATTATACTTTTTTTTT+TGG + tig0025942:9717-9736 Msa1426050:intron 10.0%
!! AATAAAAAAATTATCAGTTG+AGG - tig0025942:7989-8008 None:intergenic 15.0%
!! TATTATGATAATATCTATCT+TGG - tig0025942:8861-8880 None:intergenic 15.0%
!!! TAATATTGTTTTTACTGATA+TGG + tig0025942:8876-8895 Msa1426050:intron 15.0%
!!! AATATTGTTTTTACTGATAT+GGG + tig0025942:8877-8896 Msa1426050:intron 15.0%
!! ATTATACTTTCATATATGAT+GGG + tig0025942:9823-9842 Msa1426050:intron 15.0%
!! AATTTCATGTTAAATTTGAT+TGG + tig0025942:9913-9932 Msa1426050:intron 15.0%
!! ATTTCATGTTAAATTTGATT+GGG + tig0025942:9914-9933 Msa1426050:intron 15.0%
!!! TATTTTTTCTTTCAACTTTT+TGG + tig0025942:10117-10136 Msa1426050:intron 15.0%
!! ATTGAAGGTAAAAAAAAATT+AGG - tig0025942:10864-10883 None:intergenic 15.0%
!!! TCTTTTATTTTTGTGTTTAT+TGG - tig0025942:11096-11115 None:intergenic 15.0%
!! TAGAAAAATTACATCATATA+TGG - tig0025942:11450-11469 None:intergenic 15.0%
!! AAGAATGTATAATAAAGAAA+TGG - tig0025942:11732-11751 None:intergenic 15.0%
!!! TAAATTTTAACATTGTTGTA+TGG - tig0025942:12319-12338 None:intergenic 15.0%
!!! TTTTTTTCATCATCATTTTT+TGG - tig0025942:12355-12374 None:intergenic 15.0%
!! TTTATAAATCAGACATTTAA+GGG - tig0025942:12558-12577 None:intergenic 15.0%
!! TAAAAATCTATTAAATGAGA+TGG - tig0025942:12591-12610 None:intergenic 15.0%
!! TAAAATGTAAGAGAAATAAT+TGG - tig0025942:12703-12722 None:intergenic 15.0%
!! TTCTGATAACATTATTATTC+TGG + tig0025942:8566-8585 Msa1426050:intron 20.0%
!!! AACATTATTATTCTGGAATA+TGG + tig0025942:8573-8592 Msa1426050:intron 20.0%
!!! TGTATATTTTCATGAATTGA+CGG + tig0025942:8619-8638 Msa1426050:intron 20.0%
!! CTATAAAAACAACTGATTAT+TGG - tig0025942:9045-9064 None:intergenic 20.0%
!!! CAATAATCAGTTGTTTTTAT+AGG + tig0025942:9043-9062 Msa1426050:intron 20.0%
!! AAGTAATCATTACATGTATT+TGG + tig0025942:9360-9379 Msa1426050:intron 20.0%
!!! GATTATACTTTTTTTTTTGG+TGG + tig0025942:9720-9739 Msa1426050:intron 20.0%
!! GATTATACTTTCATATATGA+TGG + tig0025942:9822-9841 Msa1426050:intron 20.0%
!!! AAGATGACATCTAATTTTTA+TGG + tig0025942:10420-10439 Msa1426050:intron 20.0%
!!! AGATGACATCTAATTTTTAT+GGG + tig0025942:10421-10440 Msa1426050:intron 20.0%
!!! GTTTTTCTTCTATTTTCAAT+AGG + tig0025942:10596-10615 Msa1426050:intron 20.0%
!! AGAAACTAAATAATAACATC+AGG - tig0025942:10829-10848 None:intergenic 20.0%
!! ACAGATTTGTATATTAAAAC+AGG - tig0025942:11254-11273 None:intergenic 20.0%
!! GAAAAATTACATCATAGTTA+CGG - tig0025942:11343-11362 None:intergenic 20.0%
!!! ATAAACGTTGATTTTTCAAT+AGG + tig0025942:11790-11809 Msa1426050:intron 20.0%
!! GTTTATAAATCAGACATTTA+AGG - tig0025942:12559-12578 None:intergenic 20.0%
!! TACACTACATAAATCATAAT+GGG - tig0025942:12678-12697 None:intergenic 20.0%
!! ATACACTACATAAATCATAA+TGG - tig0025942:12679-12698 None:intergenic 20.0%
! CATTTCGATAGAAAGAAATT+CGG + tig0025942:7832-7851 Msa1426050:CDS 25.0%
! AAAAGTGAGATAAAAACGAT+TGG - tig0025942:8191-8210 None:intergenic 25.0%
! TTATTTAGCACGAAACATTA+AGG - tig0025942:8367-8386 None:intergenic 25.0%
! TAAAAAAAAGCGAAAGTGAA+TGG - tig0025942:8435-8454 None:intergenic 25.0%
! ATCAACTAGTTATTTGCAAT+TGG - tig0025942:9503-9522 None:intergenic 25.0%
!!! TATACTTTTTTTTTTGGTGG+TGG + tig0025942:9723-9742 Msa1426050:intron 25.0%
! ATGAATACTCAACAAATACT+GGG - tig0025942:9853-9872 None:intergenic 25.0%
! TATGAATACTCAACAAATAC+TGG - tig0025942:9854-9873 None:intergenic 25.0%
! TTACATAACACCTAATTGAA+AGG - tig0025942:9895-9914 None:intergenic 25.0%
!!! AAGCAAAAGTTAGTTTTTAC+CGG + tig0025942:10477-10496 Msa1426050:CDS 25.0%
!! TTTCTTCTATTTTCAATAGG+AGG + tig0025942:10599-10618 Msa1426050:intron 25.0%
! TACATTATTTAACACCAAAC+TGG - tig0025942:10720-10739 None:intergenic 25.0%
! GAATGTAATATGTAATGACT+TGG + tig0025942:10744-10763 Msa1426050:intron 25.0%
!!! AGTAACTTATTTTGCTCAAA+GGG - tig0025942:11031-11050 None:intergenic 25.0%
!!! AAGTAACTTATTTTGCTCAA+AGG - tig0025942:11032-11051 None:intergenic 25.0%
!! TAACAAATATGTTTTCGCAA+TGG - tig0025942:11314-11333 None:intergenic 25.0%
!!! ATTTGAGAAGAAGTATTCAT+AGG + tig0025942:11671-11690 Msa1426050:intron 25.0%
!!! TTTGAGAAGAAGTATTCATA+GGG + tig0025942:11672-11691 Msa1426050:intron 25.0%
!!! GTTACGATAGAATCTTTTTT+GGG - tig0025942:12078-12097 None:intergenic 25.0%
!!! GTTACGATAGAATCTTTTTT+GGG - tig0025942:12078-12097 None:intergenic 25.0%
!! GTTTAGATAGAATCTCTTTT+GGG - tig0025942:12210-12229 None:intergenic 25.0%
!! TGTTTAGATAGAATCTCTTT+TGG - tig0025942:12211-12230 None:intergenic 25.0%
! TACTGGATATGATTATATCA+TGG - tig0025942:12433-12452 None:intergenic 25.0%
CTTTCTATCGAAATGAATAC+CGG - tig0025942:7827-7846 None:intergenic 30.0%
GATTGAAATGATGATATACC+TGG - tig0025942:7876-7895 None:intergenic 30.0%
AAAAGATACCGATAACAGTT+TGG + tig0025942:8022-8041 Msa1426050:CDS 30.0%
TGAATAAAAGAAGCTGTTGA+CGG + tig0025942:8227-8246 Msa1426050:intron 30.0%
! AATGGACTCATCATTATCAT+CGG - tig0025942:8303-8322 None:intergenic 30.0%
! ATGATAATGATGAGTCCATT+AGG + tig0025942:8303-8322 Msa1426050:CDS 30.0%
AATCATAACATTCATGTCTC+CGG + tig0025942:8487-8506 Msa1426050:CDS 30.0%
!! TGTTTTTACTGATATGGGAT+AGG + tig0025942:8882-8901 Msa1426050:intron 30.0%
! TTTTTATAGGCTCATGCAAA+AGG + tig0025942:9056-9075 Msa1426050:intron 30.0%
ATGTTTGACCAGATAATTCA+CGG - tig0025942:9112-9131 None:intergenic 30.0%
TTACATGTATTTGGTCCTTA+AGG + tig0025942:9369-9388 Msa1426050:intron 30.0%
GGCATTAAATGTAATCCTTA+AGG - tig0025942:9387-9406 None:intergenic 30.0%
TACAGCATAAATGACAAAGT+GGG - tig0025942:9433-9452 None:intergenic 30.0%
TATTTGCAATTGGTTGACAA+TGG - tig0025942:9493-9512 None:intergenic 30.0%
!! AAATTTAGTGTTTGCTGTCT+GGG - tig0025942:9552-9571 None:intergenic 30.0%
!! AAAATTTAGTGTTTGCTGTC+TGG - tig0025942:9553-9572 None:intergenic 30.0%
! GACAGCAAACACTAAATTTT+AGG + tig0025942:9553-9572 Msa1426050:intron 30.0%
GACAATGCATAAAATATGCA+AGG - tig0025942:9768-9787 None:intergenic 30.0%
ATAGCTTATCAGATTCATCA+AGG - tig0025942:10167-10186 None:intergenic 30.0%
! AAAAGAGAGCGTATTATTGA+GGG - tig0025942:10243-10262 None:intergenic 30.0%
! AAAAAGAGAGCGTATTATTG+AGG - tig0025942:10244-10263 None:intergenic 30.0%
GAAGAACAGTCTTAAAGTAA+TGG - tig0025942:10388-10407 None:intergenic 30.0%
! ATTTTTATGGGAATCACTTC+AGG + tig0025942:10433-10452 Msa1426050:intron 30.0%
! AGATGAATGCTTTAGATAAC+AGG + tig0025942:10557-10576 Msa1426050:intron 30.0%
CTTTAGATAACAGGCATTAT+TGG + tig0025942:10566-10585 Msa1426050:intron 30.0%
TTAACACCAAACTGGAATAA+GGG - tig0025942:10712-10731 None:intergenic 30.0%
TTTAACACCAAACTGGAATA+AGG - tig0025942:10713-10732 None:intergenic 30.0%
TAGACTCTTCAAGATATTGA+AGG - tig0025942:10879-10898 None:intergenic 30.0%
GAGCAAAATAAGTTACTTGT+TGG + tig0025942:11034-11053 Msa1426050:intron 30.0%
!! TTTTGTGTTTATTGGCTGAA+GGG - tig0025942:11088-11107 None:intergenic 30.0%
!! TTTTTGTGTTTATTGGCTGA+AGG - tig0025942:11089-11108 None:intergenic 30.0%
AAATAGTATGGACAAGAACT+TGG - tig0025942:11140-11159 None:intergenic 30.0%
TCTTGTCCATACTATTTGTA+TGG + tig0025942:11143-11162 Msa1426050:intron 30.0%
TCTTCACCATACAAATAGTA+TGG - tig0025942:11152-11171 None:intergenic 30.0%
ATACTATTTGTATGGTGAAG+AGG + tig0025942:11151-11170 Msa1426050:intron 30.0%
CAAAAACAATTACACAGACA+AGG - tig0025942:11192-11211 None:intergenic 30.0%
CTAAAACAATGTTAATGCCA+TGG - tig0025942:11651-11670 None:intergenic 30.0%
!! TTGAGAAGAAGTATTCATAG+GGG + tig0025942:11673-11692 Msa1426050:intron 30.0%
CGTATTATTCTATTCACTCA+TGG + tig0025942:11704-11723 Msa1426050:intron 30.0%
!! GTTGAGATTGAATCACTTTT+GGG - tig0025942:12018-12037 None:intergenic 30.0%
!!! GGTTACGATAGAATCTTTTT+TGG - tig0025942:12079-12098 None:intergenic 30.0%
!!! GGTTACGATAGAATCTTTTT+TGG - tig0025942:12079-12098 None:intergenic 30.0%
GAGATTCTATCTAAACAAAC+CGG + tig0025942:12214-12233 Msa1426050:exon 30.0%
ACATTTCACTGTCAAAAACA+TGG - tig0025942:12271-12290 None:intergenic 30.0%
!!! ATCATCATTTTTTGGAGATG+GGG - tig0025942:12347-12366 None:intergenic 30.0%
!!! CATCATCATTTTTTGGAGAT+GGG - tig0025942:12348-12367 None:intergenic 30.0%
!!! TCATCATCATTTTTTGGAGA+TGG - tig0025942:12349-12368 None:intergenic 30.0%
GATGAAAAAAAAAGACTGAG+TGG + tig0025942:12364-12383 Msa1426050:three_prime_UTR 30.0%
!! TTTAAGCTTCTGGAAGTATT+AGG - tig0025942:12410-12429 None:intergenic 30.0%
TATATCATGGTTTAAGCTTC+TGG - tig0025942:12420-12439 None:intergenic 30.0%
AATCTTCGCCAAACTGTTAT+CGG - tig0025942:8033-8052 None:intergenic 35.0%
ACGATTGGTACAAATGATGA+TGG - tig0025942:8176-8195 None:intergenic 35.0%
TTGTTCTTTCTTCAGCCTAA+TGG - tig0025942:8321-8340 None:intergenic 35.0%
AGAACAAAATAAGCAACTCG+AGG + tig0025942:8334-8353 Msa1426050:CDS 35.0%
AAATAAGCAACTCGAGGTAT+AGG + tig0025942:8340-8359 Msa1426050:intron 35.0%
AAAAAGCGAAAGTGAATGGT+GGG - tig0025942:8431-8450 None:intergenic 35.0%
AAAAAAGCGAAAGTGAATGG+TGG - tig0025942:8432-8451 None:intergenic 35.0%
!! ACTCATCAAAGCTTTGAAGT+GGG - tig0025942:8528-8547 None:intergenic 35.0%
!! AACTCATCAAAGCTTTGAAG+TGG - tig0025942:8529-8548 None:intergenic 35.0%
! GCTTTGATGAGTTGAAAACA+AGG + tig0025942:8536-8555 Msa1426050:CDS 35.0%
! GATGAGTTGAAAACAAGGTT+AGG + tig0025942:8541-8560 Msa1426050:intron 35.0%
AATGTCCGTCCTATTTATTG+CGG + tig0025942:8677-8696 Msa1426050:intron 35.0%
AGATTCCGCAATAAATAGGA+CGG - tig0025942:8685-8704 None:intergenic 35.0%
ATTATTGGAACTCATGACAC+GGG - tig0025942:9030-9049 None:intergenic 35.0%
GATTATTGGAACTCATGACA+CGG - tig0025942:9031-9050 None:intergenic 35.0%
ACGGCTATGACAAATGATAA+CGG - tig0025942:9093-9112 None:intergenic 35.0%
ATAGCCAAACATAATCGAAG+TGG - tig0025942:9251-9270 None:intergenic 35.0%
GATTATGTTTGGCTATCAAG+AGG + tig0025942:9255-9274 Msa1426050:CDS 35.0%
TTTGGCTATCAAGAGGAAAA+AGG + tig0025942:9262-9281 Msa1426050:CDS 35.0%
AGGATTACATTTAATGCCTG+TGG + tig0025942:9389-9408 Msa1426050:intron 35.0%
CTACAGCATAAATGACAAAG+TGG - tig0025942:9434-9453 None:intergenic 35.0%
!!! TTTTGGAATGTGTTCAGACT+TGG - tig0025942:9592-9611 None:intergenic 35.0%
! GCTTCTCAATAACACTGTTT+TGG - tig0025942:9609-9628 None:intergenic 35.0%
TGCATGTTTGCCTTTCAATT+AGG + tig0025942:9882-9901 Msa1426050:intron 35.0%
TCAATCTGCTTGAACAATTG+TGG - tig0025942:10195-10214 None:intergenic 35.0%
! AAAGAGAGCGTATTATTGAG+GGG - tig0025942:10242-10261 None:intergenic 35.0%
! AAGTTTTCCTTCTTCACTTC+CGG - tig0025942:10499-10518 None:intergenic 35.0%
AAGGAAAACTTCTCGCAATT+CGG + tig0025942:10508-10527 Msa1426050:CDS 35.0%
AACATTCCCTTATTCCAGTT+TGG + tig0025942:10703-10722 Msa1426050:intron 35.0%
CTTCTTGAGACAAATCAGAA+TGG - tig0025942:10994-11013 None:intergenic 35.0%
! TTCTGATTTGTCTCAAGAAG+AGG + tig0025942:10994-11013 Msa1426050:CDS 35.0%
AACTTGGTCATATGCTTCAT+CGG - tig0025942:11124-11143 None:intergenic 35.0%
CTGTTCATCATTACTGAACA+TGG + tig0025942:11224-11243 Msa1426050:intron 35.0%
! TGGTTTTTGACAGAACACTA+TGG - tig0025942:11430-11449 None:intergenic 35.0%
TATATGCTGATGCAGAATCT+GGG - tig0025942:11609-11628 None:intergenic 35.0%
ATATATGCTGATGCAGAATC+TGG - tig0025942:11610-11629 None:intergenic 35.0%
TCAGCATATATCCACAGAAT+TGG + tig0025942:11619-11638 Msa1426050:CDS 35.0%
!! GATTTTTCAATAGGTCGTTC+TGG + tig0025942:11799-11818 Msa1426050:intron 35.0%
! AGCGATTACATTTTACACAG+AGG + tig0025942:11843-11862 Msa1426050:CDS 35.0%
! GATTACATTTTACACAGAGG+AGG + tig0025942:11846-11865 Msa1426050:CDS 35.0%
TTAGATTAGATACATTCCGC+AGG - tig0025942:11882-11901 None:intergenic 35.0%
GCGGAATGTATCTAATCTAA+TGG + tig0025942:11882-11901 Msa1426050:CDS 35.0%
AGATTCTATCTCAACCAAAC+CGG + tig0025942:11987-12006 Msa1426050:CDS 35.0%
! GGTTGAGATTGAATCACTTT+TGG - tig0025942:12019-12038 None:intergenic 35.0%
TTCAACTTCTTCTGCAACTT+CGG - tig0025942:12045-12064 None:intergenic 35.0%
!!! CGATAGAATCTTTTTTGGGT+TGG - tig0025942:12074-12093 None:intergenic 35.0%
AGATTCTATCGTAACCAAAC+CGG + tig0025942:12083-12102 Msa1426050:CDS 35.0%
!! GTTGAGATCGAATCACTTTT+GGG - tig0025942:12114-12133 None:intergenic 35.0%
!!! CGATAGAATCTTTTTTGGGT+CGG - tig0025942:12074-12093 None:intergenic 35.0%
AGATTCTATCGTAACCAAAC+CGG + tig0025942:12083-12102 Msa1426050:CDS 35.0%
CGTTTAATAAGAGACCACTT+GGG - tig0025942:12490-12509 None:intergenic 35.0%
CCAAGTGGTCTCTTATTAAA+CGG + tig0025942:12488-12507 Msa1426050:three_prime_UTR 35.0%
CAAGTGGTCTCTTATTAAAC+GGG + tig0025942:12489-12508 Msa1426050:three_prime_UTR 35.0%
TTGTGATATAGCTTTCATCG+CGG + tig0025942:12617-12636 Msa1426050:three_prime_UTR 35.0%
CTGCAACCGTACTATCAATA+TGG + tig0025942:7777-7796 Msa1426050:exon 40.0%
GCTTTCTTCATCTTCTGTCA+CGG - tig0025942:8060-8079 None:intergenic 40.0%
GACAGAAGATGAAGAAAGCA+AGG + tig0025942:8061-8080 Msa1426050:CDS 40.0%
GAGAATGTGAATACCAGAAG+AGG - tig0025942:8132-8151 None:intergenic 40.0%
!! TTGACTTGGATGTGGAACTT+CGG - tig0025942:8265-8284 None:intergenic 40.0%
!! TTCTTCGTTTGACTTGGATG+TGG - tig0025942:8273-8292 None:intergenic 40.0%
ACATCCAAGTCAAACGAAGA+AGG + tig0025942:8272-8291 Msa1426050:CDS 40.0%
! ACTCATCATTATCATCGGCT+TGG - tig0025942:8298-8317 None:intergenic 40.0%
!! CTCATCAAAGCTTTGAAGTG+GGG - tig0025942:8527-8546 None:intergenic 40.0%
GTCCTATTTATTGCGGAATC+TGG + tig0025942:8684-8703 Msa1426050:intron 40.0%
TGCCAGATTCCGCAATAAAT+AGG - tig0025942:8689-8708 None:intergenic 40.0%
! ATCCATACCTGTAAGAGTAC+CGG - tig0025942:8757-8776 None:intergenic 40.0%
! CTTACAGGTATGGATTGCAT+TGG + tig0025942:8762-8781 Msa1426050:CDS 40.0%
TTATAGGCTCATGCAAAAGG+CGG + tig0025942:9059-9078 Msa1426050:intron 40.0%
TGTCATAGCCGTGAATTATC+TGG + tig0025942:9101-9120 Msa1426050:CDS 40.0%
! ATACAGAGAGTGCAAAAAGC+TGG + tig0025942:9130-9149 Msa1426050:CDS 40.0%
! GATGCGAAACTTTTCTCCTT+TGG - tig0025942:9156-9175 None:intergenic 40.0%
ACATTTAATGCCTGTGGAGA+TGG + tig0025942:9395-9414 Msa1426050:intron 40.0%
CAATGGACAGAGCAAAGTAT+AGG - tig0025942:9476-9495 None:intergenic 40.0%
CTTCCATATGACTAACCAGT+TGG + tig0025942:9641-9660 Msa1426050:intron 40.0%
! TGTGTGTTTTCCTGTTCAGT+GGG - tig0025942:9669-9688 None:intergenic 40.0%
!!! CTTTTTTTTTTGGTGGTGGC+CGG + tig0025942:9727-9746 Msa1426050:intron 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+GGG + tig0025942:9728-9747 Msa1426050:intron 40.0%
CATAAAATATGCAAGGTCCG+CGG - tig0025942:9761-9780 None:intergenic 40.0%
TAGTAGAGTCCAACTACAGT+TGG + tig0025942:9949-9968 Msa1426050:intron 40.0%
CAATCAACACCAACTGTAGT+TGG - tig0025942:9961-9980 None:intergenic 40.0%
GCTCGATCTTCAACAAAATC+AGG - tig0025942:10279-10298 None:intergenic 40.0%
TGGGAATCACTTCAGGAATA+TGG + tig0025942:10440-10459 Msa1426050:intron 40.0%
! GTTTTTACCGGAAGTGAAGA+AGG + tig0025942:10489-10508 Msa1426050:CDS 40.0%
! AATTCGGCAAAGTTTTGCAG+AGG + tig0025942:10524-10543 Msa1426050:CDS 40.0%
GAGTCTAAATCCTCCAGTAT+TGG + tig0025942:10892-10911 Msa1426050:intron 40.0%
! CTTTGGAGAAAGACCAATAC+TGG - tig0025942:10908-10927 None:intergenic 40.0%
!! ATTGGTCTTTCTCCAAAGCA+AGG + tig0025942:10910-10929 Msa1426050:CDS 40.0%
AAGCCTTAATCCCACTAAGT+GGG + tig0025942:11380-11399 Msa1426050:intron 40.0%
ACTTCAGAGCTGGTAAAACA+TGG + tig0025942:11509-11528 Msa1426050:CDS 40.0%
CTTCAGAGCTGGTAAAACAT+GGG + tig0025942:11510-11529 Msa1426050:CDS 40.0%
TTAGATACATTCCGCAGGAA+TGG - tig0025942:11877-11896 None:intergenic 40.0%
TCTAATCTAATGGCATCCTC+AGG + tig0025942:11892-11911 Msa1426050:CDS 40.0%
TGAAGTTCCATCTTGGTTGA+CGG + tig0025942:11918-11937 Msa1426050:CDS 40.0%
AGATAGAATCTCTCTCAGGT+CGG - tig0025942:11978-11997 None:intergenic 40.0%
GTTGAGATAGAATCTCTCTC+AGG - tig0025942:11982-12001 None:intergenic 40.0%
!! GAATCACTTTTGGGTAGATC+CGG - tig0025942:12009-12028 None:intergenic 40.0%
!! GAATCACTTTTGGGTAGATC+CGG - tig0025942:12009-12028 None:intergenic 40.0%
! GGTTGAGATCGAATCACTTT+TGG - tig0025942:12115-12134 None:intergenic 40.0%
!! GAATCTCTTTTGGGTAGATC+CGG - tig0025942:12201-12220 None:intergenic 40.0%
TTGTCACAGGCTTATAGATC+CGG - tig0025942:12236-12255 None:intergenic 40.0%
AAGTATTAGGCAACATTGCC+TGG - tig0025942:12397-12416 None:intergenic 40.0%
! ACTTGGGTTGTCTACAATGA+GGG - tig0025942:12474-12493 None:intergenic 40.0%
CCGTTTAATAAGAGACCACT+TGG - tig0025942:12491-12510 None:intergenic 40.0%
TACATGTTCACTACAACGAG+AGG - tig0025942:12525-12544 None:intergenic 40.0%
ATATAGCTTTCATCGCGGTA+TGG + tig0025942:12622-12641 Msa1426050:three_prime_UTR 40.0%
TGTTGACAGTAAACCCGTTC+GGG - tig0025942:7682-7701 None:intergenic 45.0%
CTGTTGACAGTAAACCCGTT+CGG - tig0025942:7683-7702 None:intergenic 45.0%
!! TAGAAGTGAGAAGCGTCGAA+GGG + tig0025942:7715-7734 Msa1426050:five_prime_UTR 45.0%
! TTACCGTCGTTCACTTGTTG+CGG - tig0025942:7757-7776 None:intergenic 45.0%
! CGCTCGCCATATTGATAGTA+CGG - tig0025942:7786-7805 None:intergenic 45.0%
! TACCTGGAAGCGTGCAATAT+CGG - tig0025942:7860-7879 None:intergenic 45.0%
GAAACAACAGAAGCTGTGAC+TGG + tig0025942:8083-8102 Msa1426050:CDS 45.0%
AAGCTGTGACTGGAAAGAAG+AGG + tig0025942:8093-8112 Msa1426050:CDS 45.0%
AAGCGCAAGAAAACCTCTTC+TGG + tig0025942:8116-8135 Msa1426050:CDS 45.0%
! TTGGCCTTCTTCGTTTGACT+TGG - tig0025942:8279-8298 None:intergenic 45.0%
!! TCAAAGCTTTGAAGTGGGGA+TGG - tig0025942:8523-8542 None:intergenic 45.0%
AATCCAACAGCAGGCTATTC+CGG + tig0025942:8735-8754 Msa1426050:CDS 45.0%
TTCCGGTACTCTTACAGGTA+TGG + tig0025942:8752-8771 Msa1426050:CDS 45.0%
GGGCACAAGCAAAACATTCA+CGG - tig0025942:8909-8928 None:intergenic 45.0%
CATGGGACACACAAATGCAA+GGG - tig0025942:8950-8969 None:intergenic 45.0%
ACCTTGAGCTTCATGAGCAT+GGG - tig0025942:8967-8986 None:intergenic 45.0%
TACCTTGAGCTTCATGAGCA+TGG - tig0025942:8968-8987 None:intergenic 45.0%
CAAACATAATCGAAGTGGCG+TGG - tig0025942:9246-9265 None:intergenic 45.0%
CACGCCACTTCGATTATGTT+TGG + tig0025942:9244-9263 Msa1426050:CDS 45.0%
! GGAAAAAGGTTGATCTCAGC+AGG + tig0025942:9276-9295 Msa1426050:CDS 45.0%
CAGTTATAGACCATCTCCAC+AGG - tig0025942:9408-9427 None:intergenic 45.0%
!! GTGTTTGCTGTCTGGGTTTA+CGG - tig0025942:9545-9564 None:intergenic 45.0%
! GCTCCAACTGGTTAGTCATA+TGG - tig0025942:9647-9666 None:intergenic 45.0%
! GTGTGTGTTTTCCTGTTCAG+TGG - tig0025942:9670-9689 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - tig0025942:9790-9809 None:intergenic 45.0%
TGGAGAAAGACCAATACTGG+AGG - tig0025942:10905-10924 None:intergenic 45.0%
CACTTAGTGGGATTAAGGCT+TGG - tig0025942:11381-11400 None:intergenic 45.0%
CAAGCCTTAATCCCACTAAG+TGG + tig0025942:11379-11398 Msa1426050:intron 45.0%
AGCCTTAATCCCACTAAGTG+GGG + tig0025942:11381-11400 Msa1426050:intron 45.0%
TTAATCCCACTAAGTGGGGT+CGG + tig0025942:11385-11404 Msa1426050:intron 45.0%
CATGGCACTAACCAATTCTG+TGG - tig0025942:11633-11652 None:intergenic 45.0%
CACAGAATTGGTTAGTGCCA+TGG + tig0025942:11631-11650 Msa1426050:intron 45.0%
TGCAGTTGCAGAAGAAGAAG+TGG + tig0025942:11944-11963 Msa1426050:CDS 45.0%
!! ACTTTTGGGTAGATCCGGTT+TGG - tig0025942:12004-12023 None:intergenic 45.0%
CTTCTTCTGCAACTTCGGTT+TGG - tig0025942:12040-12059 None:intergenic 45.0%
!! ACTTTTGGGTAGATCCGGTT+TGG - tig0025942:12004-12023 None:intergenic 45.0%
CTTCTTCTGCAACTTCGGTT+TGG - tig0025942:12040-12059 None:intergenic 45.0%
!! TCTTTTGGGTAGATCCGGTT+TGG - tig0025942:12196-12215 None:intergenic 45.0%
AAGCCTGTGACAACAGAGAA+TGG + tig0025942:12243-12262 Msa1426050:three_prime_UTR 45.0%
AGCCTGTGACAACAGAGAAT+GGG + tig0025942:12244-12263 Msa1426050:three_prime_UTR 45.0%
! CACTTGGGTTGTCTACAATG+AGG - tig0025942:12475-12494 None:intergenic 45.0%
CTCATTGTAGACAACCCAAG+TGG + tig0025942:12473-12492 Msa1426050:three_prime_UTR 45.0%
CTGGGTTATTGTGACCCGAA+CGG + tig0025942:7665-7684 Msa1426050:five_prime_UTR 50.0%
TGGGTTATTGTGACCCGAAC+GGG + tig0025942:7666-7685 Msa1426050:five_prime_UTR 50.0%
!! GTAGAAGTGAGAAGCGTCGA+AGG + tig0025942:7714-7733 Msa1426050:five_prime_UTR 50.0%
!!! GACTCGTCGTTTTTGTTCGC+CGG + tig0025942:7805-7824 Msa1426050:CDS 50.0%
TGGGGATGGCACATTGTAAC+CGG - tig0025942:8509-8528 None:intergenic 50.0%
TTGCGGAATCTGGCAGAACT+TGG + tig0025942:8694-8713 Msa1426050:intron 50.0%
ACCAACACCAATCCAACAGC+AGG + tig0025942:8726-8745 Msa1426050:CDS 50.0%
GGAATAGCCTGCTGTTGGAT+TGG - tig0025942:8736-8755 None:intergenic 50.0%
GGCTATTCCGGTACTCTTAC+AGG + tig0025942:8747-8766 Msa1426050:CDS 50.0%
! TGTTTTGCTTGTGCCCCAAC+TGG + tig0025942:8913-8932 Msa1426050:CDS 50.0%
! GGTTTTTCCAGAGCCAGTTG+GGG - tig0025942:8929-8948 None:intergenic 50.0%
! GGGTTTTTCCAGAGCCAGTT+GGG - tig0025942:8930-8949 None:intergenic 50.0%
! AGGGTTTTTCCAGAGCCAGT+TGG - tig0025942:8931-8950 None:intergenic 50.0%
GCATGGGACACACAAATGCA+AGG - tig0025942:8951-8970 None:intergenic 50.0%
TCCCATGCTCATGAAGCTCA+AGG + tig0025942:8963-8982 Msa1426050:CDS 50.0%
CGTTGGAAGCAAAAGACAGC+TGG - tig0025942:9006-9025 None:intergenic 50.0%
GAGTGCAAAAAGCTGGCCAA+AGG + tig0025942:9137-9156 Msa1426050:CDS 50.0%
GATGCTGTTCGCGTAATCGT+TGG + tig0025942:10315-10334 Msa1426050:CDS 50.0%
AAGTTCCCCATACAGCTCCT+TGG - tig0025942:10942-10961 None:intergenic 50.0%
GACCCCACTTAGTGGGATTA+AGG - tig0025942:11386-11405 None:intergenic 50.0%
GCAGTTGACAACTTCAGAGC+TGG + tig0025942:11499-11518 Msa1426050:CDS 50.0%
!!! GGTTTTGATTGCCACTGACG+TGG + tig0025942:11531-11550 Msa1426050:CDS 50.0%
! GCTCGGGGAATGGATTTCAA+AGG + tig0025942:11556-11575 Msa1426050:CDS 50.0%
AGGAGGACATTCCATTCCTG+CGG + tig0025942:11863-11882 Msa1426050:CDS 50.0%
AGATGGAACTTCACAGCCTG+AGG - tig0025942:11911-11930 None:intergenic 50.0%
CAGGCTGTGAAGTTCCATCT+TGG + tig0025942:11911-11930 Msa1426050:CDS 50.0%
TGCAACTCCGTCAACCAAGA+TGG - tig0025942:11928-11947 None:intergenic 50.0%
GTCCCATTCTCTGTTGTCAC+AGG - tig0025942:12249-12268 None:intergenic 50.0%
TCTACAATGAGGGTGGCAAC+TGG - tig0025942:12464-12483 None:intergenic 50.0%
TGGGTTGTCTACAATGAGGG+TGG - tig0025942:12471-12490 None:intergenic 50.0%
TAGCTTTCATCGCGGTATGG+TGG + tig0025942:12625-12644 Msa1426050:three_prime_UTR 50.0%
CAGCCGCAACAAGTGAACGA+CGG + tig0025942:7751-7770 Msa1426050:five_prime_UTR 55.0%
!! GCCTGCTGTTGGATTGGTGT+TGG - tig0025942:8730-8749 None:intergenic 55.0%
GTACCGGAATAGCCTGCTGT+TGG - tig0025942:8741-8760 None:intergenic 55.0%
GAACTCATGACACGGGACGT+TGG - tig0025942:9023-9042 None:intergenic 55.0%
AAGGTCCGCGGTTCAAATCC+CGG - tig0025942:9749-9768 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - tig0025942:9795-9814 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + tig0025942:9792-9811 Msa1426050:intron 55.0%
CTGTTCGCGTAATCGTTGGC+AGG + tig0025942:10319-10338 Msa1426050:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - tig0025942:11393-11412 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - tig0025942:11394-11413 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + tig0025942:11393-11412 Msa1426050:intron 55.0%
TTGCCACTGACGTGGTTGCT+CGG + tig0025942:11539-11558 Msa1426050:CDS 55.0%
ATAGGTCGTTCTGGCAGAGC+AGG + tig0025942:11808-11827 Msa1426050:intron 55.0%
TAGGTCGTTCTGGCAGAGCA+GGG + tig0025942:11809-11828 Msa1426050:intron 55.0%
AGACTGAGTGGCAAGTGTCC+AGG + tig0025942:12376-12395 Msa1426050:three_prime_UTR 55.0%
! GGCAACTGGCATGAAGGTAC+TGG - tig0025942:12450-12469 None:intergenic 55.0%
!! GCGTCGAAGGGAAAGTGCTC+AGG + tig0025942:7727-7746 Msa1426050:five_prime_UTR 60.0%
CGCCGATATTGCACGCTTCC+AGG + tig0025942:7855-7874 Msa1426050:CDS 60.0%
! CCTGTTCAGTGGGCTCCAAC+TGG - tig0025942:9659-9678 None:intergenic 60.0%
CCAGTTGGAGCCCACTGAAC+AGG + tig0025942:9656-9675 Msa1426050:intron 60.0%
AGCGCGCCAAGGAGCTGTAT+GGG + tig0025942:10933-10952 Msa1426050:CDS 60.0%
TGCCACTGACGTGGTTGCTC+GGG + tig0025942:11540-11559 Msa1426050:CDS 60.0%
TGACGTGGTTGCTCGGGGAA+TGG + tig0025942:11546-11565 Msa1426050:CDS 60.0%
GAGGGTGGCAACTGGCATGA+AGG - tig0025942:12456-12475 None:intergenic 60.0%
! GCTTGTGCCCCAACTGGCTC+TGG + tig0025942:8919-8938 Msa1426050:CDS 65.0%
GGTGGCCGGGATTTGAACCG+CGG + tig0025942:9741-9760 Msa1426050:intron 65.0%
CCTTGGCGCGCTCCTTGCTT+TGG - tig0025942:10925-10944 None:intergenic 65.0%
! CCAAAGCAAGGAGCGCGCCA+AGG + tig0025942:10922-10941 Msa1426050:CDS 65.0%
GAGCGCGCCAAGGAGCTGTA+TGG + tig0025942:10932-10951 Msa1426050:CDS 65.0%
GCGCGCCAAGGAGCTGTATG+GGG + tig0025942:10934-10953 Msa1426050:CDS 65.0%
GCCACTGACGTGGTTGCTCG+GGG + tig0025942:11541-11560 Msa1426050:CDS 65.0%
TCCCCGAGCAACCACGTCAG+TGG - tig0025942:11545-11564 None:intergenic 65.0%
GTCGTTCTGGCAGAGCAGGG+AGG + tig0025942:11812-11831 Msa1426050:CDS 65.0%
TCTGGCAGAGCAGGGAGGAG+TGG + tig0025942:11817-11836 Msa1426050:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0025942 gene 7657 12756 7657 ID=Msa1426050;Name=Msa1426050
tig0025942 mRNA 7657 12756 7657 ID=Msa1426050-mRNA-1;Parent=Msa1426050;Name=Msa1426050-mRNA-1;_AED=0.11;_eAED=0.14;_QI=139|0.81|0.91|1|1|1|12|529|600
tig0025942 exon 7657 7876 7657 ID=Msa1426050-mRNA-1:exon:4673;Parent=Msa1426050-mRNA-1
tig0025942 exon 8020 8137 8020 ID=Msa1426050-mRNA-1:exon:4674;Parent=Msa1426050-mRNA-1
tig0025942 exon 8237 8355 8237 ID=Msa1426050-mRNA-1:exon:4675;Parent=Msa1426050-mRNA-1
tig0025942 exon 8466 8557 8466 ID=Msa1426050-mRNA-1:exon:4676;Parent=Msa1426050-mRNA-1
tig0025942 exon 8710 8812 8710 ID=Msa1426050-mRNA-1:exon:4677;Parent=Msa1426050-mRNA-1
tig0025942 exon 8904 8984 8904 ID=Msa1426050-mRNA-1:exon:4678;Parent=Msa1426050-mRNA-1
tig0025942 exon 9065 9297 9065 ID=Msa1426050-mRNA-1:exon:4679;Parent=Msa1426050-mRNA-1
tig0025942 exon 10149 10343 10149 ID=Msa1426050-mRNA-1:exon:4680;Parent=Msa1426050-mRNA-1
tig0025942 exon 10455 10545 10455 ID=Msa1426050-mRNA-1:exon:4681;Parent=Msa1426050-mRNA-1
tig0025942 exon 10893 11015 10893 ID=Msa1426050-mRNA-1:exon:4682;Parent=Msa1426050-mRNA-1
tig0025942 exon 11490 11640 11490 ID=Msa1426050-mRNA-1:exon:4683;Parent=Msa1426050-mRNA-1
tig0025942 exon 11812 12756 11812 ID=Msa1426050-mRNA-1:exon:4684;Parent=Msa1426050-mRNA-1
tig0025942 five_prime_UTR 7657 7795 7657 ID=Msa1426050-mRNA-1:five_prime_utr;Parent=Msa1426050-mRNA-1
tig0025942 CDS 7796 7876 7796 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 8020 8137 8020 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 8237 8355 8237 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 8466 8557 8466 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 8710 8812 8710 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 8904 8984 8904 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 9065 9297 9065 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 10149 10343 10149 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 10455 10545 10455 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 10893 11015 10893 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 11490 11640 11490 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 CDS 11812 12227 11812 ID=Msa1426050-mRNA-1:cds;Parent=Msa1426050-mRNA-1
tig0025942 three_prime_UTR 12228 12756 12228 ID=Msa1426050-mRNA-1:three_prime_utr;Parent=Msa1426050-mRNA-1
Gene Sequence

>Msa1426050

ATGGCGAGCGACTCGTCGTTTTTGTTCGCCGGTATTCATTTCGATAGAAAGAAATTCGGCGCCGATATTGCACGCTTCCAGAAAAAAGATACCGATAACAGTTTGGCGAAGATTCAGACCGTGACAGAAGATGAAGAAAGCAAGGAAACAACAGAAGCTGTGACTGGAAAGAAGAGGAAGCGCAAGAAAACCTCTTCTGAAGCTGTTGACGGATTCAGTGTATTCCGAAGTTCCACATCCAAGTCAAACGAAGAAGGCCAAGCCGATGATAATGATGAGTCCATTAGGCTGAAGAAAGAACAAAATAAGCAACTCGAGCGCGATGCTATCTTCAGAAAAAATCATAACATTCATGTCTCCGGTTACAATGTGCCATCCCCACTTCAAAGCTTTGATGAGTTGAAAACAAGAACTTGGATTCAGAGAACCAACACCAATCCAACAGCAGGCTATTCCGGTACTCTTACAGGTATGGATTGCATTGGATATTACATTCTTCAGAAAGTTGTTGCTGACCGTGAATGTTTTGCTTGTGCCCCAACTGGCTCTGGAAAAACCCTTGCATTTGTGTGTCCCATGCTCATGAAGCTCAAGGCTCATGCAAAAGGCGGCGTTCGAGCCGTTATCATTTGTCATAGCCGTGAATTATCTGGTCAAACATACAGAGAGTGCAAAAAGCTGGCCAAAGGAGAAAAGTTTCGCATCAAGTTAATGACAAAAAATCTTTTAAGAAATGCTGATTTTTCAAAATTTTCTTGTGACATACTTATATCCACGCCACTTCGATTATGTTTGGCTATCAAGAGGAAAAAGGTTGATCTCAGCAGAGTTGAGTATCTTGTCCTTGATGAATCTGATAAGCTATTTGAGCCACAATTGTTCAAGCAGATTGATTCTATTATCAAAGCATGCACAAACCCCTCAATAATACGCTCTCTTTTTAGTGCTACTTTACCTGATTTTGTTGAAGATCGAGCTCGAGAACTCATGCATGATGCTGTTCGCGTAATCGTTGGCAGGAAGAATATGGCTTCTGATACAATTAAGCAAAAGTTAGTTTTTACCGGAAGTGAAGAAGGAAAACTTCTCGCAATTCGGCAAAGTTTTGCAGAGAGTCTAAATCCTCCAGTATTGGTCTTTCTCCAAAGCAAGGAGCGCGCCAAGGAGCTGTATGGGGAACTTGCATTCGACAATATTAGAGTTGATGTCATCCATTCTGATTTGTCTCAAGAAGAGCGAGAAAATGCAGTTGACAACTTCAGAGCTGGTAAAACATGGGTTTTGATTGCCACTGACGTGGTTGCTCGGGGAATGGATTTCAAAGGCATAAACTGCGTGATCAATTATGATTTCCCAGATTCTGCATCAGCATATATCCACAGAATTGGTCGTTCTGGCAGAGCAGGGAGGAGTGGCGAAGCGATTACATTTTACACAGAGGAGGACATTCCATTCCTGCGGAATGTATCTAATCTAATGGCATCCTCAGGCTGTGAAGTTCCATCTTGGTTGACGGAGTTGCAGTTGCAGAAGAAGAAGTGGAAGAAGCACCGACCTGAGAGAGATTCTATCTCAACCAAACCGGATCTACCCAAAAGTGATTCAATCTCAACCAAACCGAAGTTGCAGAAGAAGTTGAAGAAGCACCAACCCAAAAAAGATTCTATCGTAACCAAACCGGATCTACCCAAAAGTGATTCGATCTCAACCAAACCGAAGTTGCAGAAGAAGTTGAAGAAGCACCGACCCAAAAAAGATTCTATCGTAACCAAACCGGATCTACCCAAAAGAGATTCTATCTAA
Protein sequence

>Msa1426050

MASDSSFLFAGIHFDRKKFGADIARFQKKDTDNSLAKIQTVTEDEESKETTEAVTGKKRKRKKTSSEAVDGFSVFRSSTSKSNEEGQADDNDESIRLKKEQNKQLERDAIFRKNHNIHVSGYNVPSPLQSFDELKTRTWIQRTNTNPTAGYSGTLTGMDCIGYYILQKVVADRECFACAPTGSGKTLAFVCPMLMKLKAHAKGGVRAVIICHSRELSGQTYRECKKLAKGEKFRIKLMTKNLLRNADFSKFSCDILISTPLRLCLAIKRKKVDLSRVEYLVLDESDKLFEPQLFKQIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEEDIPFLRNVSNLMASSGCEVPSWLTELQLQKKKWKKHRPERDSISTKPDLPKSDSISTKPKLQKKLKKHQPKKDSIVTKPDLPKSDSISTKPKLQKKLKKHRPKKDSIVTKPDLPKRDSI*