AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0968650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968650 MtrunA17_Chr7g0223711 87.218 266 34 0 1 266 1 266 1.73e-174 495
Msa0968650 MtrunA17_Chr7g0223701 88.372 258 30 0 1 258 1 258 2.56e-171 488
Msa0968650 MtrunA17_Chr8g0350731 86.090 266 37 0 1 266 29 294 4.29e-170 485
Msa0968650 MtrunA17_Chr7g0223621 82.331 266 47 0 1 266 1 266 2.01e-164 469
Msa0968650 MtrunA17_Chr7g0223741 78.571 266 57 0 1 266 1 266 4.42e-158 452
Msa0968650 MtrunA17_Chr7g0223751 78.947 266 56 0 1 266 1 266 1.08e-156 450
Msa0968650 MtrunA17_Chr7g0223031 79.845 258 52 0 1 258 1 258 1.53e-155 446
Msa0968650 MtrunA17_Chr7g0223631 85.938 256 22 2 1 256 1 242 3.37e-155 445
Msa0968650 MtrunA17_Chr7g0223731 77.068 266 61 0 1 266 1 266 1.81e-151 436
Msa0968650 MtrunA17_Chr7g0223781 76.316 266 63 0 1 266 1 266 2.29e-150 433
Msa0968650 MtrunA17_Chr2g0293601 74.806 258 65 0 1 258 1 258 4.86e-148 422
Msa0968650 MtrunA17_Chr2g0293561 72.556 266 73 0 1 266 1 266 2.32e-147 417
Msa0968650 MtrunA17_Chr2g0293581 73.783 267 69 1 1 266 1 267 8.48e-147 424
Msa0968650 MtrunA17_Chr7g0223801 74.812 266 66 1 1 266 1 265 1.86e-146 423
Msa0968650 MtrunA17_Chr2g0298851 73.308 266 71 0 1 266 1 266 2.70e-146 423
Msa0968650 MtrunA17_Chr7g0223851 75.969 258 62 0 1 258 10 267 3.38e-146 423
Msa0968650 MtrunA17_Chr7g0248131 79.297 256 51 2 1 254 1 256 2.13e-145 421
Msa0968650 MtrunA17_Chr7g0221661 72.932 266 72 0 1 266 1 266 3.82e-145 420
Msa0968650 MtrunA17_Chr7g0245521 72.692 260 70 1 1 260 1 259 6.00e-145 407
Msa0968650 MtrunA17_Chr5g0427901 71.119 277 69 1 1 266 1 277 3.39e-144 418
Msa0968650 MtrunA17_Chr7g0233311 72.556 266 73 0 1 266 1 266 2.50e-143 415
Msa0968650 MtrunA17_Chr7g0228281 72.180 266 74 0 1 266 62 327 3.74e-143 416
Msa0968650 MtrunA17_Chr7g0225671 73.764 263 67 1 4 266 13 273 9.90e-143 414
Msa0968650 MtrunA17_Chr7g0233301 72.659 267 71 2 1 266 1 266 1.38e-141 410
Msa0968650 MtrunA17_Chr7g0262821 73.684 266 68 1 1 266 1 264 5.01e-141 410
Msa0968650 MtrunA17_Chr7g0223821 73.308 266 71 0 1 266 1 266 7.23e-141 412
Msa0968650 MtrunA17_Chr4g0040931 71.053 266 77 0 1 266 1 266 7.93e-141 409
Msa0968650 MtrunA17_Chr2g0296391 71.429 266 76 0 1 266 1 266 1.03e-140 406
Msa0968650 MtrunA17_Chr4g0073741 73.684 266 67 2 1 266 1 263 5.38e-140 408
Msa0968650 MtrunA17_Chr7g0223181 73.684 266 68 1 1 266 1 264 5.59e-140 408
Msa0968650 MtrunA17_Chr7g0223721 74.016 254 66 0 1 254 1 254 6.67e-140 407
Msa0968650 MtrunA17_Chr7g0248151 76.692 266 62 0 1 266 1 266 1.28e-139 406
Msa0968650 MtrunA17_Chr1g0151991 69.663 267 81 0 1 267 1 267 1.49e-139 394
Msa0968650 MtrunA17_Chr4g0031321 72.556 266 71 1 1 266 1 264 6.67e-139 405
Msa0968650 MtrunA17_Chr7g0223291 72.932 266 70 1 1 266 1 264 1.97e-138 404
Msa0968650 MtrunA17_Chr2g0298861 71.004 269 67 1 1 258 1 269 2.34e-138 403
Msa0968650 MtrunA17_Chr4g0031301 71.805 266 73 1 1 266 1 264 4.08e-138 403
Msa0968650 MtrunA17_Chr7g0215261 68.421 266 66 1 1 266 1 248 2.28e-130 381
Msa0968650 MtrunA17_Chr2g0287631 70.677 266 78 0 1 266 1 266 3.10e-130 382
Msa0968650 MtrunA17_Chr6g0462601 69.549 266 79 1 1 266 1 264 1.76e-128 378
Msa0968650 MtrunA17_Chr7g0217971 67.829 258 59 1 1 258 1 234 2.53e-126 371
Msa0968650 MtrunA17_Chr6g0462681 70.543 258 74 1 1 258 1 256 1.36e-125 372
Msa0968650 MtrunA17_Chr4g0012541 67.442 258 75 1 1 258 1 249 2.84e-122 361
Msa0968650 MtrunA17_Chr6g0462771 69.922 256 75 1 8 263 8 261 6.10e-122 362
Msa0968650 MtrunA17_Chr6g0462711 67.568 259 83 1 8 266 9 266 2.70e-120 358
Msa0968650 MtrunA17_Chr2g0299921 69.962 263 75 2 4 266 1024 1282 1.49e-119 375
Msa0968650 MtrunA17_Chr2g0299921 67.045 264 82 3 4 266 1408 1667 4.62e-112 354
Msa0968650 MtrunA17_Chr2g0331381 65.759 257 62 2 10 266 7 237 5.43e-119 348
Msa0968650 MtrunA17_Chr7g0223831 64.662 266 66 1 1 266 1 238 1.18e-118 352
Msa0968650 MtrunA17_Chr7g0223671 82.143 196 33 1 74 267 8 203 2.24e-118 337
Msa0968650 MtrunA17_Chr6g0462641 66.540 263 86 1 1 263 1 261 1.73e-117 351
Msa0968650 MtrunA17_Chr2g0284681 65.217 253 86 1 9 261 8 258 8.93e-117 347
Msa0968650 MtrunA17_Chr2g0299851 63.910 266 92 2 1 266 1030 1291 4.02e-113 354
Msa0968650 MtrunA17_Chr2g0299821 60.448 268 102 2 1 266 1 266 1.55e-111 330
Msa0968650 MtrunA17_Chr2g0299791 65.038 266 89 2 1 266 1034 1295 6.22e-111 348
Msa0968650 MtrunA17_Chr2g0299881 64.684 269 87 4 2 266 1031 1295 1.11e-109 345
Msa0968650 MtrunA17_Chr2g0299881 58.209 67 28 0 184 250 1409 1475 6.88e-19 86.3
Msa0968650 MtrunA17_Chr2g0293271 71.154 208 60 0 21 228 43 250 3.86e-109 321
Msa0968650 MtrunA17_Chr8g0390821 56.013 316 71 7 1 263 1 301 3.26e-107 324
Msa0968650 MtrunA17_Chr7g0223541 77.202 193 44 0 74 266 31 223 1.37e-106 320
Msa0968650 MtrunA17_Chr8g0388761 63.415 246 83 4 7 251 36 275 1.19e-102 313
Msa0968650 MtrunA17_Chr8g0388671 63.821 246 82 4 7 251 36 275 3.65e-102 311
Msa0968650 MtrunA17_Chr7g0223681 88.750 160 18 0 91 250 2 161 3.78e-98 297
Msa0968650 MtrunA17_Chr1g0188601 69.714 175 53 0 92 266 1 175 1.24e-89 264
Msa0968650 MtrunA17_Chr6g0462611 68.108 185 59 0 74 258 22 206 2.31e-83 261
Msa0968650 MtrunA17_Chr7g0223771 74.026 154 40 0 93 246 1 154 3.99e-83 246
Msa0968650 MtrunA17_Chr6g0462861 53.488 258 107 4 1 258 1 245 9.77e-83 260
Msa0968650 MtrunA17_Chr1g0166551 51.373 255 52 2 9 263 5 187 1.76e-79 248
Msa0968650 MtrunA17_Chr4g0049501 51.190 252 110 5 10 260 54 293 4.77e-79 251
Msa0968650 MtrunA17_Chr2g0279901 53.252 246 102 5 10 254 57 290 5.46e-79 251
Msa0968650 MtrunA17_Chr2g0277021 50.813 246 110 5 10 254 72 307 2.67e-70 229
Msa0968650 MtrunA17_Chr7g0223861 74.046 131 34 0 78 208 4 134 3.91e-67 204
Msa0968650 MtrunA17_Chr4g0046881 70.588 136 40 0 131 266 10 145 2.23e-65 201
Msa0968650 MtrunA17_Chr6g0462791 65.333 150 51 1 109 258 2 150 3.49e-64 198
Msa0968650 MtrunA17_Chr6g0481391 64.754 122 40 1 38 159 13 131 4.15e-51 163
Msa0968650 MtrunA17_Chr6g0462701 51.786 168 57 1 91 258 13 156 2.13e-50 163
Msa0968650 MtrunA17_Chr4g0004331 38.095 252 149 3 10 258 4 251 8.51e-49 172
Msa0968650 MtrunA17_Chr6g0462751 51.497 167 62 2 67 231 12 161 1.45e-48 163
Msa0968650 MtrunA17_Chr2g0331901 36.000 250 157 2 10 258 4 251 8.09e-47 167
Msa0968650 MtrunA17_Chr7g0223691 89.041 73 8 0 1 73 1 73 1.49e-44 145
Msa0968650 MtrunA17_Chr6g0462631 48.538 171 58 3 91 258 13 156 1.17e-43 150
Msa0968650 MtrunA17_Chr5g0444001 34.553 246 158 2 10 254 4 247 7.70e-41 147
Msa0968650 MtrunA17_Chr3g0098761 32.400 250 166 2 10 258 4 251 4.22e-39 144
Msa0968650 MtrunA17_Chr1g0188591 75.342 73 18 0 1 73 1 73 3.11e-33 116
Msa0968650 MtrunA17_Chr5g0394231 34.973 183 69 3 74 256 5 137 4.01e-33 119
Msa0968650 MtrunA17_Chr6g0481381 72.973 74 20 0 176 249 1 74 1.01e-32 118
Msa0968650 MtrunA17_Chr6g0462621 76.712 73 15 1 1 73 1 71 3.23e-32 113
Msa0968650 MtrunA17_Chr5g0394391 31.801 261 165 6 8 259 28 284 1.31e-30 119
Msa0968650 MtrunA17_Chr7g0223791 70.732 82 16 3 56 137 18 91 2.98e-30 111
Msa0968650 MtrunA17_Chr3g0120101 27.099 262 173 5 10 256 27 285 3.58e-27 110
Msa0968650 MtrunA17_Chr4g0064621 30.712 267 155 10 8 252 139 397 4.89e-21 92.4
Msa0968650 MtrunA17_Chr4g0060241 28.195 266 164 9 8 259 19 271 1.12e-18 85.5
Msa0968650 MtrunA17_Chr5g0442161 29.936 157 103 4 5 157 24 177 6.41e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968650 AT3G12580.1 74.812 266 65 1 1 266 1 264 3.03e-142 414
Msa0968650 AT5G02500.2 73.764 263 67 1 1 263 1 261 9.36e-142 408
Msa0968650 AT1G56410.1 74.144 263 66 1 1 263 1 261 4.04e-140 407
Msa0968650 AT5G02490.1 74.144 263 66 1 1 263 1 261 5.78e-140 408
Msa0968650 AT5G02500.1 72.932 266 70 1 1 266 1 264 6.08e-140 408
Msa0968650 AT3G09440.1 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0968650 AT3G09440.4 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0968650 AT3G09440.2 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0968650 AT3G09440.3 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0968650 AT1G16030.1 71.053 266 74 2 1 266 1 263 2.78e-133 391
Msa0968650 AT1G09080.2 65.714 245 78 3 7 251 40 278 4.30e-109 329
Msa0968650 AT1G09080.1 65.714 245 78 3 7 251 50 288 8.62e-109 329
Msa0968650 AT5G42020.2 62.205 254 89 4 7 259 35 282 1.84e-103 313
Msa0968650 AT5G42020.1 62.205 254 89 4 7 259 35 282 3.30e-103 314
Msa0968650 AT5G28540.1 62.205 254 89 4 7 259 35 282 5.49e-103 314
Msa0968650 AT5G42020.3 62.205 254 89 4 7 259 40 287 7.11e-103 313
Msa0968650 AT5G09590.1 52.846 246 104 4 10 254 60 294 2.22e-78 250
Msa0968650 AT4G37910.1 51.220 246 108 4 10 254 55 289 1.57e-77 248
Msa0968650 AT4G37910.2 51.220 246 108 4 10 254 55 289 1.57e-77 248
Msa0968650 AT4G24280.1 50.407 246 111 5 10 254 81 316 6.76e-70 228
Msa0968650 AT5G49910.1 49.593 246 113 5 10 254 81 316 4.76e-69 226
Msa0968650 AT1G79930.2 38.000 250 152 2 10 258 4 251 5.78e-51 178
Msa0968650 AT1G79930.1 38.000 250 152 2 10 258 4 251 9.39e-51 178
Msa0968650 AT1G79920.1 37.698 252 150 3 10 258 4 251 1.67e-49 174
Msa0968650 AT1G79920.3 37.698 252 150 3 10 258 4 251 1.83e-49 174
Msa0968650 AT1G79920.2 37.698 252 150 3 10 258 4 251 1.83e-49 174
Msa0968650 AT1G79920.4 37.698 252 150 3 10 258 4 251 1.83e-49 174
Msa0968650 AT1G11660.4 36.800 250 152 3 10 256 4 250 1.81e-46 166
Msa0968650 AT1G11660.3 36.800 250 152 3 10 256 4 250 1.81e-46 166
Msa0968650 AT1G11660.1 36.800 250 152 3 10 256 4 250 1.81e-46 166
Msa0968650 AT1G11660.2 39.437 213 125 2 47 256 2 213 1.74e-40 149
Msa0968650 AT2G32120.1 32.143 252 156 7 8 249 29 275 2.73e-28 113
Msa0968650 AT2G32120.2 32.143 252 156 7 8 249 29 275 2.73e-28 113
Msa0968650 AT4G16660.2 26.236 263 175 5 6 253 47 305 8.93e-27 109
Msa0968650 AT4G16660.1 26.236 263 175 5 6 253 23 281 1.16e-26 109

Find 200 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAACCTCCTCAAGGCTTT+TGG 0.126998 6_3:+99907390 None:intergenic
TTTGAATTGGCTTCAAAATT+TGG 0.143460 6_3:+99908455 None:intergenic
TCTACTGTTGTGGCCCTTTA+AGG 0.152881 6_3:-99907909 Msa0968650:CDS
TTGATATATTATGCTATATT+TGG 0.161182 6_3:-99906217 Msa0968650:three_prime_UTR
TGTCACTTGGTAAGTCAATT+AGG 0.195343 6_3:-99906966 Msa0968650:three_prime_UTR
TGCATCGTGACGCTGATAAT+TGG 0.202249 6_3:-99913737 Msa0968650:five_prime_UTR
GGATGCTCACCTGCAGTTTA+TGG 0.220649 6_3:+99911736 None:intergenic
TCCTTGTTGGTGGTTCTTCT+AGG 0.229614 6_3:-99907155 Msa0968650:three_prime_UTR
CTTCTGAGTGTACCCTAAAA+TGG 0.240296 6_3:+99915143 None:intergenic
TGGCCCTTTAAGGTCATTTC+CGG 0.243786 6_3:-99907899 Msa0968650:CDS
TGTAGTGTGAAGTAGTATTT+TGG 0.244820 6_3:+99908492 None:intergenic
GCAGATGCAAAGAGGTTAAT+TGG 0.250254 6_3:-99907965 Msa0968650:intron
CTGTCTTGTTGATGCTAAAA+TGG 0.256497 6_3:-99907202 Msa0968650:three_prime_UTR
TGCTTACGGTGCAGCTATTC+AGG 0.270565 6_3:-99907052 Msa0968650:three_prime_UTR
AACCCAACCAACACTGTCTT+TGG 0.276208 6_3:-99908198 Msa0968650:intron
GTCACTTGGTAAGTCAATTA+GGG 0.283941 6_3:-99906965 Msa0968650:three_prime_UTR
CGTTAAGAGTGTTCCAATCT+TGG 0.295237 6_3:-99907010 Msa0968650:three_prime_UTR
CCTTGAAATTCTCAGCTTCC+TGG 0.297903 6_3:+99906611 None:intergenic
TTTGTGCAGCTTCTGACATT+TGG 0.300358 6_3:-99912819 Msa0968650:five_prime_UTR
GTAATTACTGCATTCTTAAC+AGG 0.301333 6_3:+99907752 None:intergenic
TGCAATAGCTGCTTCACTTT+AGG 0.304620 6_3:+99907129 None:intergenic
GCATCTACATGTAGTTATTC+TGG 0.316117 6_3:-99913767 Msa0968650:five_prime_UTR
TATGGAAAACCTGTACAATA+TGG 0.332198 6_3:+99912719 None:intergenic
CTTACTCGTGTGTTGGAGTA+TGG 0.335848 6_3:-99908347 Msa0968650:CDS
AGAAGATATCTTTGTGTTTG+TGG 0.337493 6_3:-99906410 Msa0968650:three_prime_UTR
CAAGTTTGAGCAATTGAATA+TGG 0.349032 6_3:-99907259 Msa0968650:three_prime_UTR
AGCACCGGAAATGACCTTAA+AGG 0.349583 6_3:+99907895 None:intergenic
TTCATTCACTTGAAGCACTA+TGG 0.351239 6_3:-99908415 Msa0968650:exon
GCATCGTGACGCTGATAATT+GGG 0.356750 6_3:-99913736 Msa0968650:five_prime_UTR
CAGCATCACCAATCAGCCTT+TGG 0.360159 6_3:+99908241 None:intergenic
GTCGATGATGTTGTCCTTGT+TGG 0.366819 6_3:-99907168 Msa0968650:three_prime_UTR
GTAGGTTGCAAATAATAATA+AGG 0.369217 6_3:+99912754 None:intergenic
ATAAACAAACCTGTACAATA+TGG 0.370301 6_3:+99912701 None:intergenic
TTGATCTTCTCTTTGTCTAC+AGG 0.380282 6_3:+99906478 None:intergenic
CTTCCTGTGAGAGGGCAAAA+AGG 0.380533 6_3:-99907365 Msa0968650:three_prime_UTR
AGTTGAAGCAAGAAATGCTT+TGG 0.381737 6_3:-99906563 Msa0968650:three_prime_UTR
CCGTAAGCAACAGCCTCATC+AGG 0.392319 6_3:+99907066 None:intergenic
CATTGAGATATCAACAGAAT+TGG 0.394482 6_3:+99912370 None:intergenic
TGTCTTAATTAAAGTTTATG+AGG 0.397181 6_3:-99906851 Msa0968650:three_prime_UTR
AAGAACAAAGAGGATATTAG+TGG 0.402789 6_3:-99907417 Msa0968650:CDS
GAGGAAGTACAGAAGAATAT+TGG 0.406656 6_3:-99912348 Msa0968650:intron
AGATTGAACTTTGTAGCATC+TGG 0.407129 6_3:+99913711 None:intergenic
AGCATCACCAATCAGCCTTT+GGG 0.410141 6_3:+99908242 None:intergenic
TACCAAAGACAGTGTTGGTT+GGG 0.410143 6_3:+99908196 None:intergenic
ACTAATTCCCAAAGGCTGAT+TGG 0.414254 6_3:-99908249 Msa0968650:CDS
TTTGTAGTGAAGATTTGAAT+TGG 0.414430 6_3:+99908442 None:intergenic
ATTCAAATCTTCACTACAAA+CGG 0.416588 6_3:-99908439 Msa0968650:five_prime_UTR
GCTTCTGACATTTGGAGTGT+TGG 0.416848 6_3:-99912811 Msa0968650:five_prime_UTR
CCTCGAGCATATATACCATT+TGG 0.417233 6_3:-99913648 Msa0968650:five_prime_UTR
AGCGGGATGCCGTGATGGTT+CGG 0.419541 6_3:+99915712 None:intergenic
TAAAGTGAAGCAGCTATTGC+AGG 0.420438 6_3:-99907127 Msa0968650:three_prime_UTR
AGCCTGCAGTCGTGGTCTCC+AGG 0.421414 6_3:-99913836 Msa0968650:five_prime_UTR
GGTTAGGTTCAGAGTTGGTT+AGG 0.422618 6_3:-99912467 Msa0968650:five_prime_UTR
CATATTCAATTGCTCAAACT+TGG 0.426433 6_3:+99907260 None:intergenic
TTTGATGTCAAGGCCACTGC+TGG 0.427311 6_3:-99907509 Msa0968650:CDS
TTTCAGGTTATAGAAATGTC+TGG 0.429962 6_3:-99912844 Msa0968650:intron
AAAGATGCAGGTGAAATTGC+TGG 0.430331 6_3:-99907689 Msa0968650:CDS
GCACCGGAAATGACCTTAAA+GGG 0.431309 6_3:+99907896 None:intergenic
ACACAAAGATATCTTCTTGC+TGG 0.431467 6_3:+99906416 None:intergenic
AACTACATGTAGATGCCTTT+AGG 0.433038 6_3:+99913774 None:intergenic
ACATCTCGCAAAACCAAGAT+TGG 0.436932 6_3:+99906997 None:intergenic
CTCGTGCATAACGTTGGATC+TGG 0.439679 6_3:-99906266 Msa0968650:three_prime_UTR
CACTATGGCAAACAAATATG+AGG 0.441399 6_3:-99908400 Msa0968650:exon
CACCAACCACAAGAGGTTGC+TGG 0.445446 6_3:+99911763 None:intergenic
GTTGCTGGTTTGCTCTCAAA+AGG 0.450378 6_3:+99911778 None:intergenic
TGGGACGTTTGTAGGTGGTT+AGG 0.451072 6_3:-99912483 Msa0968650:intron
ACAGGAATGGAAGTGTTCCT+TGG 0.453543 6_3:+99906919 None:intergenic
CAACGTTTCCATGGTCTATG+AGG 0.456333 6_3:-99911352 Msa0968650:intron
TCCCTGGAGACCACGACTGC+AGG 0.458253 6_3:+99913834 None:intergenic
GCATATATACCATTTGGACT+TGG 0.461777 6_3:-99913642 Msa0968650:five_prime_UTR
TTTATCTTTGACCTTGGCGG+TGG 0.462714 6_3:-99907572 Msa0968650:CDS
CTCTGATGAGAAAAGTGATT+CGG 0.468846 6_3:-99906326 Msa0968650:three_prime_UTR
TTGTAGTTCACAAGAATTGT+CGG 0.473999 6_3:+99907863 None:intergenic
TTTCAGGGAGAAAGAAAGGT+GGG 0.476553 6_3:-99911385 Msa0968650:intron
GGATGCCGTGATGGTTCGGT+GGG 0.481605 6_3:+99915716 None:intergenic
ACACTTCCATTCCTGTCAAA+AGG 0.483025 6_3:-99906912 Msa0968650:three_prime_UTR
ACTGCAGCTGCTCTAGCATA+TGG 0.483457 6_3:-99907635 Msa0968650:CDS
TAAAGCATACTTTGAAAGGA+TGG 0.483629 6_3:+99906755 None:intergenic
CCTGATGAGGCTGTTGCTTA+CGG 0.484166 6_3:-99907066 Msa0968650:three_prime_UTR
ATTGTAAAGCATACTTTGAA+AGG 0.484358 6_3:+99906751 None:intergenic
GACCTAGATGCTATATATCA+AGG 0.488303 6_3:-99907312 Msa0968650:three_prime_UTR
CTTTAATTAAGACAGTGCTT+TGG 0.491685 6_3:+99906860 None:intergenic
GAAATTATTCACAATGATCA+AGG 0.492859 6_3:-99908303 Msa0968650:CDS
GCTAGTGAGAACAACTTGCT+TGG 0.498631 6_3:-99906814 Msa0968650:three_prime_UTR
CATGTTACTTGACAGAGATA+TGG 0.502653 6_3:-99912418 Msa0968650:five_prime_UTR
CCAGGAAGCTGAGAATTTCA+AGG 0.503257 6_3:-99906611 Msa0968650:three_prime_UTR
GAAAGTAGAACACTGTGAAT+TGG 0.505642 6_3:-99911859 Msa0968650:five_prime_UTR
AAATATGAGGGAGTTGCGAT+TGG 0.506277 6_3:-99908387 Msa0968650:CDS
GAGCATCTTTGAATCTGCTA+TGG 0.507207 6_3:-99906368 Msa0968650:three_prime_UTR
GGAGAATTTATGCTACCTAA+AGG 0.508703 6_3:-99913789 Msa0968650:five_prime_UTR
CATATATACCATTTGGACTT+GGG 0.510958 6_3:-99913641 Msa0968650:five_prime_UTR
TGTGAATCATTAAAATAAGC+AGG 0.511579 6_3:+99907725 None:intergenic
ATGCCGTGATGGTTCGGTGG+GGG 0.513873 6_3:+99915718 None:intergenic
ATGAGAAGGGAAGATTATCA+AGG 0.517115 6_3:-99906654 Msa0968650:three_prime_UTR
TAGGTGGTTAGGTTCAGAGT+TGG 0.520387 6_3:-99912472 Msa0968650:five_prime_UTR
TGTCGACTCCCAAGTCCAAA+TGG 0.522876 6_3:+99913633 None:intergenic
TCAGCGTCACGATGCAATGA+TGG 0.523020 6_3:+99913744 None:intergenic
GGCACGACTTACTCGTGTGT+TGG 0.523542 6_3:-99908354 Msa0968650:CDS
AATCTAGAGAGATTTGCTAA+TGG 0.523657 6_3:-99913693 Msa0968650:five_prime_UTR
ATCATTAAAATAAGCAGGTA+CGG 0.526365 6_3:+99907730 None:intergenic
AAATAAGGTCTTTGATGTCA+AGG 0.528245 6_3:-99907519 Msa0968650:CDS
GTTGCGATTGGAATTGACCT+TGG 0.528850 6_3:-99908375 Msa0968650:CDS
GAAAACACATTCACAGCAGT+TGG 0.531319 6_3:+99911800 None:intergenic
CATCTCAGCTAAAACTTCCC+TGG 0.532705 6_3:+99913818 None:intergenic
TTATTATTTGCAACCTACGC+TGG 0.534168 6_3:-99912749 Msa0968650:five_prime_UTR
TGTCGGTTTGTCATCAGCAC+CGG 0.535167 6_3:+99907880 None:intergenic
ACAAATTGACAGAATGATCC+AGG 0.535296 6_3:-99906629 Msa0968650:three_prime_UTR
GATGATGTTGTCCTTGTTGG+TGG 0.537032 6_3:-99907165 Msa0968650:three_prime_UTR
AAAGCATTTCAACGTTTCCA+TGG 0.539490 6_3:-99911361 Msa0968650:five_prime_UTR
GCCTGCAGTCGTGGTCTCCA+GGG 0.541153 6_3:-99913835 Msa0968650:five_prime_UTR
GAGGATGGAAACATGTATCA+AGG 0.542420 6_3:-99915105 Msa0968650:five_prime_UTR
ACGGCAGCGGGATGCCGTGA+TGG 0.543194 6_3:+99915707 None:intergenic
TGCTTCCTCGTGCATAACGT+TGG 0.544280 6_3:-99906272 Msa0968650:three_prime_UTR
GGTGAATAAGAGAGGTGTGA+AGG 0.549620 6_3:-99915081 Msa0968650:intron
GTCTTAATTAAAGTTTATGA+GGG 0.551072 6_3:-99906850 Msa0968650:three_prime_UTR
GGCAATACAAATACGATTAG+CGG 0.553899 6_3:+99911821 None:intergenic
TATGCTAGAGCAGCTGCAGT+TGG 0.556128 6_3:+99907638 None:intergenic
AACGACGAAAACAATGGATG+TGG 0.559334 6_3:+99915749 None:intergenic
AGATATCAACAGAATTGGAC+GGG 0.563398 6_3:+99912375 None:intergenic
TTATGAATGTGGTGATTCCA+AGG 0.564013 6_3:-99906936 Msa0968650:three_prime_UTR
AGCAAACCAGCAACCTCTTG+TGG 0.566154 6_3:-99911769 Msa0968650:five_prime_UTR
TACCTTGATATATAGCATCT+AGG 0.567285 6_3:+99907310 None:intergenic
ATCAAGGAGGTGAATAAGAG+AGG 0.567729 6_3:-99915089 Msa0968650:five_prime_UTR
TGCTTTACAATAGATGCTGA+TGG 0.571047 6_3:-99906739 Msa0968650:three_prime_UTR
ATGCAAAGAGGTTAATTGGA+AGG 0.571352 6_3:-99907961 Msa0968650:CDS
TGAGAAGGGAAGATTATCAA+GGG 0.572473 6_3:-99906653 Msa0968650:three_prime_UTR
GGGATGCCGTGATGGTTCGG+TGG 0.572653 6_3:+99915715 None:intergenic
CAATCTCTCGCATCTGTGAG+AGG 0.572867 6_3:+99907795 None:intergenic
AACAGAATTGGACGGGAGTG+AGG 0.573835 6_3:+99912382 None:intergenic
AATTACAATAACTAATGAGA+AGG 0.576503 6_3:-99906668 Msa0968650:three_prime_UTR
TAAATTACCAAAGACAGTGT+TGG 0.578436 6_3:+99908191 None:intergenic
TGAATTGGTTCATGTGATTG+TGG 0.579683 6_3:-99911844 Msa0968650:five_prime_UTR
TTACCAAAGACAGTGTTGGT+TGG 0.584440 6_3:+99908195 None:intergenic
TCCTCCTCTAAGACAGAGAA+GGG 0.584445 6_3:-99915170 Msa0968650:intron
TAGGGGAGATATTATGAATG+TGG 0.588778 6_3:-99906947 Msa0968650:three_prime_UTR
CATATCTCTGTCAAGTAACA+TGG 0.589827 6_3:+99912419 None:intergenic
TGGCTATCACCAACCACAAG+AGG 0.590154 6_3:+99911756 None:intergenic
CGAAGAGCGACTAAAGATGC+AGG 0.590788 6_3:-99907701 Msa0968650:CDS
TCTTGTGAACTACAAGGGTG+AGG 0.592468 6_3:-99907855 Msa0968650:CDS
GGAAGTTCTCAACCTCCTCA+AGG 0.593442 6_3:+99907383 None:intergenic
TTCCTCCTCTAAGACAGAGA+AGG 0.593610 6_3:-99915171 Msa0968650:intron
TTGCTTTCACTAATTCCCAA+AGG 0.594534 6_3:-99908257 Msa0968650:CDS
TATAGCATCTAGGTCAATTG+TGG 0.597011 6_3:+99907320 None:intergenic
TAGGTGAGTGTCTCCAGCAG+TGG 0.598292 6_3:+99907496 None:intergenic
AACCAGCAACCTCTTGTGGT+TGG 0.598413 6_3:-99911765 Msa0968650:five_prime_UTR
ATTACAATAACTAATGAGAA+GGG 0.598716 6_3:-99906667 Msa0968650:three_prime_UTR
GGATGGCCTCGAGGTGCGAG+AGG 0.599577 6_3:+99906772 None:intergenic
GACAATTCTTGTGAACTACA+AGG 0.599895 6_3:-99907861 Msa0968650:CDS
GTTGAGAACTTCCTGTGAGA+GGG 0.601258 6_3:-99907373 Msa0968650:three_prime_UTR
GGTTGAGAACTTCCTGTGAG+AGG 0.604182 6_3:-99907374 Msa0968650:three_prime_UTR
GAGATATCAACAGAATTGGA+CGG 0.609093 6_3:+99912374 None:intergenic
TATCAAAGTCTTCACCGCCT+AGG 0.609377 6_3:+99907477 None:intergenic
TGAAGACTTTGATAACAGAA+TGG 0.610392 6_3:-99907468 Msa0968650:CDS
AAGAAGAACGACGAAAACAA+TGG 0.612808 6_3:+99915743 None:intergenic
CACTTTGTGAAGGAGTTCAG+AGG 0.613579 6_3:-99907440 Msa0968650:CDS
TCACTTCCTCTCGCACCTCG+AGG 0.617001 6_3:-99906778 Msa0968650:three_prime_UTR
GATGTTACACCATTGTCACT+TGG 0.617615 6_3:-99906979 Msa0968650:three_prime_UTR
CATCAAAAGTTCCACCGCCA+AGG 0.617660 6_3:+99907561 None:intergenic
GACACTTTGATACGACATTG+AGG 0.619150 6_3:-99907343 Msa0968650:three_prime_UTR
CATCGTGACGCTGATAATTG+GGG 0.619314 6_3:-99913735 Msa0968650:five_prime_UTR
CAGTAGATCATTCTGAACAA+TGG 0.620189 6_3:+99907925 None:intergenic
GATGCCGTGATGGTTCGGTG+GGG 0.621998 6_3:+99915717 None:intergenic
CGTAAGCAACAGCCTCATCA+GGG 0.624820 6_3:+99907067 None:intergenic
GATCAACTCAGCAATGACCA+AGG 0.625695 6_3:-99906461 Msa0968650:three_prime_UTR
TTAGTGAAAGCAACACAAGA+AGG 0.625764 6_3:+99908267 None:intergenic
TGGTGATAGCCATAAACTGC+AGG 0.630276 6_3:-99911745 Msa0968650:intron
TTCAGAATGATCTACTGTTG+TGG 0.632222 6_3:-99907919 Msa0968650:CDS
AGAACAAAGAGGATATTAGT+GGG 0.633089 6_3:-99907416 Msa0968650:CDS
TAGGTTCAGAGTTGGTTAGG+CGG 0.637332 6_3:-99912464 Msa0968650:five_prime_UTR
CAAGAGCATTAACCCTGATG+AGG 0.639574 6_3:-99907079 Msa0968650:three_prime_UTR
ACGACGAAAACAATGGATGT+GGG 0.642044 6_3:+99915750 None:intergenic
ACTATGGCAAACAAATATGA+GGG 0.643119 6_3:-99908399 Msa0968650:CDS
ACTGCTGGAGACACTCACCT+AGG 0.643459 6_3:-99907494 Msa0968650:CDS
AATGGTGAATCACTTTGTGA+AGG 0.643840 6_3:-99907450 Msa0968650:CDS
TCACTTGGTAAGTCAATTAG+GGG 0.645508 6_3:-99906964 Msa0968650:three_prime_UTR
TCCTAGAAGAACCACCAACA+AGG 0.646014 6_3:+99907154 None:intergenic
AACTTGTACCTCATAGACCA+TGG 0.649888 6_3:+99911344 None:intergenic
ATTGACTTACCAAGTGACAA+TGG 0.650268 6_3:+99906970 None:intergenic
ATCAACTCAGCAATGACCAA+GGG 0.650698 6_3:-99906460 Msa0968650:three_prime_UTR
GGTTGCAAATAATAATAAGG+AGG 0.652162 6_3:+99912757 None:intergenic
CACACGAGTAAGTCGTGCCA+AGG 0.653849 6_3:+99908358 None:intergenic
CCAAATGGTATATATGCTCG+AGG 0.654994 6_3:+99913648 None:intergenic
CTTGGGAGTCGACATTGTCA+AGG 0.655503 6_3:-99913624 Msa0968650:five_prime_UTR
AGTTCAGAGGAAGAACAAAG+AGG 0.657636 6_3:-99907427 Msa0968650:CDS
GCTATGGACAAGATCAACAA+AGG 0.659225 6_3:-99906352 Msa0968650:three_prime_UTR
GCATGAGCAGAACGATCGTG+TGG 0.659349 6_3:-99908325 Msa0968650:CDS
ACAATTCTTGTGAACTACAA+GGG 0.663306 6_3:-99907860 Msa0968650:CDS
GTGGGAACCCAAAAGCCTTG+AGG 0.668086 6_3:-99907398 Msa0968650:exon
GGAACCCAAAAGCCTTGAGG+AGG 0.669169 6_3:-99907395 Msa0968650:exon
CAGATCCAACGTTATGCACG+AGG 0.671670 6_3:+99906267 None:intergenic
GAGAAGGGAAGATTATCAAG+GGG 0.682752 6_3:-99906652 Msa0968650:three_prime_UTR
TTGCTGGTCTCAATGTAATG+CGG 0.692548 6_3:-99907673 Msa0968650:CDS
ATATGGAAAAGAGCCAGCGT+AGG 0.696903 6_3:+99912736 None:intergenic
ATTCTGTTGATATCTCAATG+AGG 0.706448 6_3:-99912367 Msa0968650:five_prime_UTR
ACTTTGAAAGGATGGCCTCG+AGG 0.710427 6_3:+99906763 None:intergenic
ACAGATGCGAGAGATTGCAG+AGG 0.728184 6_3:-99907789 Msa0968650:CDS
TCTGCAGTGGAAGAAACCAG+TGG 0.733951 6_3:-99906703 Msa0968650:three_prime_UTR
GCTGGAGACACTCACCTAGG+CGG 0.737514 6_3:-99907491 Msa0968650:CDS
GATGGAAACATGTATCAAGG+AGG 0.751456 6_3:-99915102 Msa0968650:five_prime_UTR
CTGCCGTGAGAACAAAACAA+CGG 0.757059 6_3:-99915691 Msa0968650:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAAAAAAAATATTTAAC+TGG + chr6_3:99906477-99906496 None:intergenic 10.0%
!!! TTTAAGAAACAATTTTTTTT+TGG - chr6_3:99908696-99908715 Msa0968650:intron 10.0%
!!! TCTGTTATAATTTTAAATAT+TGG - chr6_3:99908908-99908927 Msa0968650:intron 10.0%
!!! ATAATTTTTTTTTCTTTTTC+TGG - chr6_3:99910866-99910885 Msa0968650:intron 10.0%
!! TAAAAATAATAATACATCTT+AGG - chr6_3:99910934-99910953 Msa0968650:intron 10.0%
!!! TGTTTTTATTATAGTTTTTT+TGG - chr6_3:99912855-99912874 Msa0968650:intron 10.0%
!! TATTCTTACAATTAAAAATA+AGG - chr6_3:99914408-99914427 Msa0968650:intron 10.0%
!! AAAAGAGAAATAAATTGAAA+AGG + chr6_3:99906916-99906935 None:intergenic 15.0%
!!! TACATTTTATTTAGCATTTT+AGG - chr6_3:99907090-99907109 Msa0968650:three_prime_UTR 15.0%
!! AAAAAAGTTGTCTAAATTAT+AGG - chr6_3:99907222-99907241 Msa0968650:three_prime_UTR 15.0%
!! TATTCAAGTCATATTATATA+CGG + chr6_3:99907482-99907501 None:intergenic 15.0%
!! TTAATTATACATGTAGTAAA+AGG + chr6_3:99907739-99907758 None:intergenic 15.0%
!!! AATTCAACTTTTAGATTTTT+AGG + chr6_3:99907954-99907973 None:intergenic 15.0%
!!! AATTCAACTTTTAGATTTTT+AGG + chr6_3:99907954-99907973 None:intergenic 15.0%
!! AAAATCTAAAAGTTGAATTT+AGG - chr6_3:99908032-99908051 Msa0968650:intron 15.0%
!!! TTTTTTAGGTCTAATTTTTT+TGG + chr6_3:99909723-99909742 None:intergenic 15.0%
!!! ATAAACTCTATCTATTTTTT+AGG + chr6_3:99909737-99909756 None:intergenic 15.0%
!!! AAAATAGATAGAGTTTATTT+TGG - chr6_3:99909739-99909758 Msa0968650:intron 15.0%
!!! AAATAGATAGAGTTTATTTT+GGG - chr6_3:99909740-99909759 Msa0968650:intron 15.0%
!!! TATTAGAAAATTTTAAGTGT+TGG + chr6_3:99910724-99910743 None:intergenic 15.0%
!!! AAAATTTTCTAATATAGTGT+AGG - chr6_3:99910730-99910749 Msa0968650:intron 15.0%
!!! TTTTAAAGTTGATTTTGAAA+AGG - chr6_3:99911659-99911678 Msa0968650:intron 15.0%
!!! TGGATTTATTAAGATTTTAA+AGG + chr6_3:99913002-99913021 None:intergenic 15.0%
!! TTGATATATTATGCTATATT+TGG - chr6_3:99915725-99915744 Msa0968650:five_prime_UTR 15.0%
!! GAATTTAAGAGAAAAACTTA+TGG + chr6_3:99906438-99906457 None:intergenic 20.0%
!!! TTTTCTCTTAAATTCGAATT+TGG - chr6_3:99906443-99906462 Msa0968650:three_prime_UTR 20.0%
!! ATGACTTGAATAATTATATG+TGG - chr6_3:99907490-99907509 Msa0968650:CDS 20.0%
!! TGACTTGAATAATTATATGT+GGG - chr6_3:99907491-99907510 Msa0968650:CDS 20.0%
!! ATAAGACAAAAAGTTATATG+TGG - chr6_3:99907882-99907901 Msa0968650:CDS 20.0%
!! TCTAAAAGTTGAATTATATG+TGG - chr6_3:99907959-99907978 Msa0968650:CDS 20.0%
!!! ATTTTATTGTCTATATTCTC+CGG - chr6_3:99908633-99908652 Msa0968650:intron 20.0%
!! GTACATATGTTGAAATATAT+AGG - chr6_3:99908669-99908688 Msa0968650:intron 20.0%
!!! TCATTGAATTTTATGTATCT+CGG - chr6_3:99908723-99908742 Msa0968650:intron 20.0%
!!! TTTTATTGTAGCTTCTTTTA+GGG + chr6_3:99908936-99908955 None:intergenic 20.0%
!!! ATTTTATTGTAGCTTCTTTT+AGG + chr6_3:99908937-99908956 None:intergenic 20.0%
!!! TGCTCTAAAAAAGTAATTTT+AGG - chr6_3:99908963-99908982 Msa0968650:intron 20.0%
!!! CAGTAAACATGATAAAATTT+TGG + chr6_3:99909822-99909841 None:intergenic 20.0%
!! AATTGTGTAACAAGTATAAT+TGG - chr6_3:99909958-99909977 Msa0968650:intron 20.0%
!! ATTGTGTAACAAGTATAATT+GGG - chr6_3:99909959-99909978 Msa0968650:intron 20.0%
!!! AAAAACAAGTTTTTTGCTAT+AGG + chr6_3:99910484-99910503 None:intergenic 20.0%
!!! TTGATTAGTTTTACTGATTA+CGG - chr6_3:99910525-99910544 Msa0968650:intron 20.0%
!!! TTCATAAACAAAGTATTAGA+GGG + chr6_3:99910672-99910691 None:intergenic 20.0%
!!! ATTCATAAACAAAGTATTAG+AGG + chr6_3:99910673-99910692 None:intergenic 20.0%
!!! AAACTATATAATTTTGGCAA+AGG + chr6_3:99910798-99910817 None:intergenic 20.0%
!!! GCATTCAAACTATATAATTT+TGG + chr6_3:99910804-99910823 None:intergenic 20.0%
!! AATAATAATACATCTTAGGT+CGG - chr6_3:99910938-99910957 Msa0968650:intron 20.0%
!! ACTTAACAGATAATTTCTTA+AGG - chr6_3:99911091-99911110 Msa0968650:intron 20.0%
!!! GAAGTATATTCTTTTTAAGT+CGG + chr6_3:99911128-99911147 None:intergenic 20.0%
!! TTAAAGACATTAGGAATATT+TGG + chr6_3:99911807-99911826 None:intergenic 20.0%
!! TGTAAAAACAAGGAATAAAT+TGG - chr6_3:99912080-99912099 Msa0968650:intron 20.0%
!! AGAATAAAGAATTGAAGATA+TGG - chr6_3:99912109-99912128 Msa0968650:intron 20.0%
!! TAGATTGTATCATATTATCT+TGG - chr6_3:99912513-99912532 Msa0968650:intron 20.0%
!! TATTGTGTATGAGTTTAATT+TGG - chr6_3:99912600-99912619 Msa0968650:intron 20.0%
!!! AATTGATGTATATGTCTTTT+TGG - chr6_3:99912879-99912898 Msa0968650:intron 20.0%
!!! TAAGATTTTAAAGGACTTTA+TGG + chr6_3:99912993-99913012 None:intergenic 20.0%
!!! AAGATTTTAAAAGACTTTGT+TGG + chr6_3:99913105-99913124 None:intergenic 20.0%
!! AACAATTAACATACTAACAT+CGG + chr6_3:99913216-99913235 None:intergenic 20.0%
!! AACTAAAAATTAAACAATGC+TGG + chr6_3:99913791-99913810 None:intergenic 20.0%
!! GTTGATATGAAAATGAAAAT+AGG - chr6_3:99913930-99913949 Msa0968650:intron 20.0%
!!! AATATTTTTATCTTTGACCT+TGG - chr6_3:99914364-99914383 Msa0968650:intron 20.0%
!! TGTCTTAATTAAAGTTTATG+AGG - chr6_3:99915091-99915110 Msa0968650:five_prime_UTR 20.0%
!! GTCTTAATTAAAGTTTATGA+GGG - chr6_3:99915092-99915111 Msa0968650:five_prime_UTR 20.0%
!! AATTACAATAACTAATGAGA+AGG - chr6_3:99915274-99915293 Msa0968650:intron 20.0%
!! ATTACAATAACTAATGAGAA+GGG - chr6_3:99915275-99915294 Msa0968650:intron 20.0%
! ACAAAAAGAACAAAGAAGAA+AGG + chr6_3:99906372-99906391 None:intergenic 25.0%
! AAACTTATGGAAGAAATTGA+AGG + chr6_3:99906425-99906444 None:intergenic 25.0%
! TTTCATACAGAAAGATTTCA+GGG + chr6_3:99906532-99906551 None:intergenic 25.0%
!! TTTTCATACAGAAAGATTTC+AGG + chr6_3:99906533-99906552 None:intergenic 25.0%
! CTTTCTGTATGAAAATTCAT+TGG - chr6_3:99906538-99906557 Msa0968650:three_prime_UTR 25.0%
!!! TTATTCTGTTTTTGGTGATT+TGG - chr6_3:99906660-99906679 Msa0968650:three_prime_UTR 25.0%
! TGAGTACATGAAAATTGAAA+GGG + chr6_3:99906974-99906993 None:intergenic 25.0%
! TTGAGTACATGAAAATTGAA+AGG + chr6_3:99906975-99906994 None:intergenic 25.0%
! GACTTGAATAATTATATGTG+GGG - chr6_3:99907492-99907511 Msa0968650:CDS 25.0%
! TATCTCAAATATGTTCTCAT+TGG - chr6_3:99907576-99907595 Msa0968650:CDS 25.0%
! ATACATGTAGTAAAAGGAAA+TGG + chr6_3:99907733-99907752 None:intergenic 25.0%
! CATAAGACAAAAGTTATATG+TGG - chr6_3:99907799-99907818 Msa0968650:CDS 25.0%
!! TACTACCTTAATTTTTGTCA+TGG + chr6_3:99908355-99908374 None:intergenic 25.0%
!! ATAATTTGGTGAAACATCAA+AGG + chr6_3:99908403-99908422 None:intergenic 25.0%
!! ATTAACACCATTTTATACAC+AGG + chr6_3:99908435-99908454 None:intergenic 25.0%
! AGTATTTATAGTGACTTTGT+TGG - chr6_3:99908567-99908586 Msa0968650:intron 25.0%
! GAGATACATAAAATTCAATG+AGG + chr6_3:99908724-99908743 None:intergenic 25.0%
! TCATCATCAACAATATTGTA+AGG + chr6_3:99908762-99908781 None:intergenic 25.0%
!! TGATGATGATACCATTTAAT+TGG - chr6_3:99908773-99908792 Msa0968650:intron 25.0%
! ATCAACATCTTCCAATTAAA+TGG + chr6_3:99908787-99908806 None:intergenic 25.0%
!! TGATGATGATACCATTTAAT+TGG - chr6_3:99908773-99908792 Msa0968650:intron 25.0%
!! CTCATTTTCTTCCAATTAAA+TGG + chr6_3:99908817-99908836 None:intergenic 25.0%
! CATTTAATTGGAAGAAAATG+AGG - chr6_3:99908815-99908834 Msa0968650:intron 25.0%
! AAATTATCCAATCTCATATC+AGG + chr6_3:99908861-99908880 None:intergenic 25.0%
!! TTTATTGTAGCTTCTTTTAG+GGG + chr6_3:99908935-99908954 None:intergenic 25.0%
!!! AATTTTAGGTACTAAAAAGC+AGG - chr6_3:99908977-99908996 Msa0968650:intron 25.0%
!!! ATTTTAGGTACTAAAAAGCA+GGG - chr6_3:99908978-99908997 Msa0968650:intron 25.0%
! GTAGGTTGCAAATAATAATA+AGG + chr6_3:99909191-99909210 None:intergenic 25.0%
! ATAAACAAACCTGTACAATA+TGG + chr6_3:99909244-99909263 None:intergenic 25.0%
! AATTGTTCCAATTATGAACT+CGG + chr6_3:99909368-99909387 None:intergenic 25.0%
!!! TATCTTAACTATTGATTCGA+TGG - chr6_3:99909401-99909420 Msa0968650:intron 25.0%
!!! ATCTTAACTATTGATTCGAT+GGG - chr6_3:99909402-99909421 Msa0968650:intron 25.0%
! TGATTAAGGTTTGAAAATGT+TGG - chr6_3:99909439-99909458 Msa0968650:intron 25.0%
! GATTAAGGTTTGAAAATGTT+GGG - chr6_3:99909440-99909459 Msa0968650:intron 25.0%
!!! TAGGTCTAATTTTTTTGGTA+AGG + chr6_3:99909718-99909737 None:intergenic 25.0%
! TAAGACATTACAACAAACTT+TGG + chr6_3:99909862-99909881 None:intergenic 25.0%
!!! TTGTTTTGCTTCTTTTTTGT+CGG - chr6_3:99909891-99909910 Msa0968650:intron 25.0%
!! TTATACTTGTTACACAATTG+TGG + chr6_3:99909957-99909976 None:intergenic 25.0%
! AGTATAATTGGGAAACAAAT+AGG - chr6_3:99909970-99909989 Msa0968650:intron 25.0%
! AACAAATAGGATGTCATATT+TGG - chr6_3:99909983-99910002 Msa0968650:intron 25.0%
! ACAAATAGGATGTCATATTT+GGG - chr6_3:99909984-99910003 Msa0968650:intron 25.0%
! TCATATTTGGGAAAATTAGT+CGG - chr6_3:99909996-99910015 Msa0968650:intron 25.0%
!!! TTTACATCTTTTTTGTTGAC+AGG - chr6_3:99910056-99910075 Msa0968650:intron 25.0%
!!! AAAGACTCATTTTAATCCAA+GGG + chr6_3:99910355-99910374 None:intergenic 25.0%
!!! TAAAGACTCATTTTAATCCA+AGG + chr6_3:99910356-99910375 None:intergenic 25.0%
!!! AGCAAAAAACTTGTTTTTTG+AGG - chr6_3:99910486-99910505 Msa0968650:intron 25.0%
!!! CTTTTTCTGGAAAAATAGTT+TGG - chr6_3:99910879-99910898 Msa0968650:intron 25.0%
!!! CAAACAAAAACTTGTTAAGT+CGG - chr6_3:99911021-99911040 Msa0968650:intron 25.0%
! ATCTGTTAAGTCAGTTAAAA+GGG + chr6_3:99911082-99911101 None:intergenic 25.0%
! TATCTGTTAAGTCAGTTAAA+AGG + chr6_3:99911083-99911102 None:intergenic 25.0%
! TAACAGATAATTTCTTAAGG+CGG - chr6_3:99911094-99911113 Msa0968650:intron 25.0%
! AAGAATATACTTCTTATGAC+AGG - chr6_3:99911135-99911154 Msa0968650:intron 25.0%
!!! TTAAAAAGGGCTTTTTAAGT+CGG + chr6_3:99911183-99911202 None:intergenic 25.0%
!!! CTTTTTAAGTCGGTTAAAAA+GGG + chr6_3:99911196-99911215 None:intergenic 25.0%
!!! CTTTTTAACCGACTTAAAAA+GGG - chr6_3:99911195-99911214 Msa0968650:intron 25.0%
!!! ACAAAAAACCCTTTTTAAGT+CGG + chr6_3:99911206-99911225 None:intergenic 25.0%
!!! TTTTTTGTACAAGAGTGATA+TGG - chr6_3:99911218-99911237 Msa0968650:intron 25.0%
!! TCATGTTTTACCATCTATTA+TGG - chr6_3:99911271-99911290 Msa0968650:intron 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr6_3:99911440-99911459 None:intergenic 25.0%
!! AGTTAAGCATGTTTTATGTT+TGG - chr6_3:99911577-99911596 Msa0968650:intron 25.0%
!! GTTAAGCATGTTTTATGTTT+GGG - chr6_3:99911578-99911597 Msa0968650:intron 25.0%
!! TTAAGCATGTTTTATGTTTG+GGG - chr6_3:99911579-99911598 Msa0968650:intron 25.0%
! GAAAAGGCTTAAATATTCAT+TGG - chr6_3:99911675-99911694 Msa0968650:intron 25.0%
!! TTTGAATTCTTTTGATACGT+CGG - chr6_3:99911704-99911723 Msa0968650:intron 25.0%
!!! TTCCTAATGTCTTTAAGTTT+TGG - chr6_3:99911811-99911830 Msa0968650:five_prime_UTR 25.0%
! AACCAAAACTTAAAGACATT+AGG + chr6_3:99911816-99911835 None:intergenic 25.0%
! AGCATTATAACAACAAAGAT+TGG - chr6_3:99911934-99911953 Msa0968650:intron 25.0%
! ATAACAACAAAGATTGGATT+TGG - chr6_3:99911940-99911959 Msa0968650:intron 25.0%
!! GTATATCCATTAAGTTGTTT+AGG - chr6_3:99912229-99912248 Msa0968650:intron 25.0%
!!! GGGATTTTATTTATGTAAAC+TGG - chr6_3:99912550-99912569 Msa0968650:intron 25.0%
!!! ATGTTTGATGATCTAGTTTT+TGG - chr6_3:99912633-99912652 Msa0968650:intron 25.0%
!!! GGATTTTCAAGATTTTAAAG+AGG + chr6_3:99912972-99912991 None:intergenic 25.0%
!! TTCTTGATGCAAGATTTTAA+TGG + chr6_3:99913022-99913041 None:intergenic 25.0%
!! GTATTGGATTGAGATTTTAA+AGG + chr6_3:99913152-99913171 None:intergenic 25.0%
! AAAATGTGACTAGTATCTTA+GGG + chr6_3:99913179-99913198 None:intergenic 25.0%
! AAAAATGTGACTAGTATCTT+AGG + chr6_3:99913180-99913199 None:intergenic 25.0%
!! TTTGAATTGGCTTCAAAATT+TGG + chr6_3:99913490-99913509 None:intergenic 25.0%
! TTTGTAGTGAAGATTTGAAT+TGG + chr6_3:99913503-99913522 None:intergenic 25.0%
! ATTCAAATCTTCACTACAAA+CGG - chr6_3:99913503-99913522 Msa0968650:intron 25.0%
! GAAATTATTCACAATGATCA+AGG - chr6_3:99913639-99913658 Msa0968650:five_prime_UTR 25.0%
!! ATATTATCCATCACCATTTT+AGG - chr6_3:99913861-99913880 Msa0968650:five_prime_UTR 25.0%
!! TATTATCCATCACCATTTTA+GGG - chr6_3:99913862-99913881 Msa0968650:five_prime_UTR 25.0%
! TTGCATCTGCAAAAAATTAA+GGG + chr6_3:99913967-99913986 None:intergenic 25.0%
! TTTGCATCTGCAAAAAATTA+AGG + chr6_3:99913968-99913987 None:intergenic 25.0%
! ATCATTAAAATAAGCAGGTA+CGG + chr6_3:99914215-99914234 None:intergenic 25.0%
! TGTGAATCATTAAAATAAGC+AGG + chr6_3:99914220-99914239 None:intergenic 25.0%
! ATTGTAAAGCATACTTTGAA+AGG + chr6_3:99915194-99915213 None:intergenic 25.0%
!!! AATTTCATTTTTATTGCCAC+TGG + chr6_3:99915258-99915277 None:intergenic 25.0%
ACATGCTTGAAACAAAGATT+AGG + chr6_3:99906298-99906317 None:intergenic 30.0%
AAGAACAAAGAAGAAAGGAT+GGG + chr6_3:99906367-99906386 None:intergenic 30.0%
AAAGAACAAAGAAGAAAGGA+TGG + chr6_3:99906368-99906387 None:intergenic 30.0%
ACTTGTTTACAAGGTAACAA+GGG + chr6_3:99906575-99906594 None:intergenic 30.0%
! AACTTGTTTACAAGGTAACA+AGG + chr6_3:99906576-99906595 None:intergenic 30.0%
! TAAAGACACAAACTTTTCTC+AGG + chr6_3:99906715-99906734 None:intergenic 30.0%
!! TATGACTTGTTGCACAAAAT+AGG - chr6_3:99906888-99906907 Msa0968650:three_prime_UTR 30.0%
GAGTACATGAAAATTGAAAG+GGG + chr6_3:99906973-99906992 None:intergenic 30.0%
AAATCCGCAAATTGAACAAA+GGG + chr6_3:99907020-99907039 None:intergenic 30.0%
! TTTGTTAGTGCAATTGATTC+AGG - chr6_3:99907133-99907152 Msa0968650:three_prime_UTR 30.0%
! TATAGGCTGAGTTTCTAAAA+TGG - chr6_3:99907239-99907258 Msa0968650:three_prime_UTR 30.0%
TAATAAATGGTTGTCCATGA+TGG - chr6_3:99907286-99907305 Msa0968650:three_prime_UTR 30.0%
TCTAATTAAGTGTACCATCA+TGG + chr6_3:99907303-99907322 None:intergenic 30.0%
GAGTGTAGAAAATCTATTTG+TGG - chr6_3:99907321-99907340 Msa0968650:three_prime_UTR 30.0%
TGTAGAAAATCTATTTGTGG+AGG - chr6_3:99907324-99907343 Msa0968650:three_prime_UTR 30.0%
TTAAGAAAATCATGGGATCA+TGG - chr6_3:99907379-99907398 Msa0968650:three_prime_UTR 30.0%
GAACACAAAATCAGTTTGTA+AGG + chr6_3:99907530-99907549 None:intergenic 30.0%
AAAATCAACCTAATTGTCGA+AGG + chr6_3:99907639-99907658 None:intergenic 30.0%
! CGATCATTATAATTTGCAGA+AGG + chr6_3:99907679-99907698 None:intergenic 30.0%
!! AATCTAGAGAGATTTGCTAA+TGG - chr6_3:99908249-99908268 Msa0968650:CDS 30.0%
CATATATACCATTTGGACTT+GGG - chr6_3:99908301-99908320 Msa0968650:CDS 30.0%
CTTTGCCATGACAAAAATTA+AGG - chr6_3:99908347-99908366 Msa0968650:CDS 30.0%
! ATGGTGTTAATGCCAAAATA+TGG - chr6_3:99908444-99908463 Msa0968650:five_prime_UTR 30.0%
AGAACGCAGAAAAATGATTA+TGG - chr6_3:99908493-99908512 Msa0968650:five_prime_UTR 30.0%
ATTGGAAGAAAATGAGGATT+AGG - chr6_3:99908821-99908840 Msa0968650:intron 30.0%
TTACTATCCTGATATGAGAT+TGG - chr6_3:99908851-99908870 Msa0968650:intron 30.0%
! TTATTGTAGCTTCTTTTAGG+GGG + chr6_3:99908934-99908953 None:intergenic 30.0%
GATTTAGGCTTAACAAATGA+TGG - chr6_3:99909005-99909024 Msa0968650:intron 30.0%
!!! TTCCTTATCTCATTTTGGTT+TGG - chr6_3:99909073-99909092 Msa0968650:intron 30.0%
AACCAAACCAAAATGAGATA+AGG + chr6_3:99909078-99909097 None:intergenic 30.0%
!!! TCATTTTGGTTTGGTTTTTC+AGG - chr6_3:99909082-99909101 Msa0968650:intron 30.0%
!! TTTCAGGTTATAGAAATGTC+TGG - chr6_3:99909098-99909117 Msa0968650:intron 30.0%
GGTTGCAAATAATAATAAGG+AGG + chr6_3:99909188-99909207 None:intergenic 30.0%
TATGGAAAACCTGTACAATA+TGG + chr6_3:99909226-99909245 None:intergenic 30.0%
ATTGAGGATACAATGAAAGA+TGG + chr6_3:99909270-99909289 None:intergenic 30.0%
ATTGTATCCTCAATCTATGA+AGG - chr6_3:99909276-99909295 Msa0968650:intron 30.0%
GACAATTATAAAAGAAACCC+AGG + chr6_3:99909311-99909330 None:intergenic 30.0%
! ATTTTCAAACCTTAATCAGC+AGG + chr6_3:99909437-99909456 None:intergenic 30.0%
CATTGAGATATCAACAGAAT+TGG + chr6_3:99909575-99909594 None:intergenic 30.0%
ATTCTGTTGATATCTCAATG+AGG - chr6_3:99909575-99909594 Msa0968650:intron 30.0%
TGTTGATGTTCCTTAACTAT+GGG - chr6_3:99909673-99909692 Msa0968650:intron 30.0%
TGGTAAGGTTTGAAAATGTT+GGG + chr6_3:99909703-99909722 None:intergenic 30.0%
TTGGTAAGGTTTGAAAATGT+TGG + chr6_3:99909704-99909723 None:intergenic 30.0%
AAACTTTGGTTGAACAATAG+TGG + chr6_3:99909848-99909867 None:intergenic 30.0%
!! AGATTTTCGAGAATTTTGCA+CGG - chr6_3:99909926-99909945 Msa0968650:intron 30.0%
TTATCTGCCAAAATAAGCAT+TGG - chr6_3:99910249-99910268 Msa0968650:intron 30.0%
TATCTGCCAAAATAAGCATT+GGG - chr6_3:99910250-99910269 Msa0968650:intron 30.0%
!!! TATTTTTCAGGGAGAAAGAA+AGG - chr6_3:99910553-99910572 Msa0968650:intron 30.0%
!! CAAGTTTTTGTTTGCTAAGT+TGG + chr6_3:99911015-99911034 None:intergenic 30.0%
! TTAAAAGGGCTTTTTATGTC+GGG + chr6_3:99911068-99911087 None:intergenic 30.0%
! GTTAAAAGGGCTTTTTATGT+CGG + chr6_3:99911069-99911088 None:intergenic 30.0%
!!! TAAAAAGGGCTTTTTAAGTC+GGG + chr6_3:99911182-99911201 None:intergenic 30.0%
!!! CCTTTTTAAGTCGGTTAAAA+AGG + chr6_3:99911197-99911216 None:intergenic 30.0%
!! CCTTTTTAACCGACTTAAAA+AGG - chr6_3:99911194-99911213 Msa0968650:intron 30.0%
ACATGACTGTTTGATTAAGA+TGG + chr6_3:99911257-99911276 None:intergenic 30.0%
! AGTAATCTTTCGTTCTAGAT+AGG + chr6_3:99911298-99911317 None:intergenic 30.0%
AACTAATAAGCTATGAAGCA+TGG + chr6_3:99911561-99911580 None:intergenic 30.0%
! TTGAATTCTTTTGATACGTC+GGG - chr6_3:99911705-99911724 Msa0968650:intron 30.0%
! TTGAATACTGTATTGGCATA+GGG + chr6_3:99911991-99912010 None:intergenic 30.0%
! TTTGAATACTGTATTGGCAT+AGG + chr6_3:99911992-99912011 None:intergenic 30.0%
! TTGAGAGAGTGTAACAAATT+GGG - chr6_3:99912057-99912076 Msa0968650:intron 30.0%
ACAAATTGGGTGTAAAAACA+AGG - chr6_3:99912070-99912089 Msa0968650:intron 30.0%
TGAAGATATGGAAAGAATGT+TGG - chr6_3:99912121-99912140 Msa0968650:intron 30.0%
TGAAAATCAGTTCTTGGAAT+TGG - chr6_3:99912150-99912169 Msa0968650:intron 30.0%
! TCCATTAAGTTGTTTAGGAT+TGG - chr6_3:99912234-99912253 Msa0968650:intron 30.0%
ACCAATCCTAAACAACTTAA+TGG + chr6_3:99912238-99912257 None:intergenic 30.0%
! ATTAAGTTGTTTAGGATTGG+TGG - chr6_3:99912237-99912256 Msa0968650:intron 30.0%
! TTAAGTTGTTTAGGATTGGT+GGG - chr6_3:99912238-99912257 Msa0968650:intron 30.0%
! AAGGGACAATTTTATGTTCT+TGG - chr6_3:99912367-99912386 Msa0968650:five_prime_UTR 30.0%
! AATTTTATGTTCTTGGTGGA+AGG - chr6_3:99912374-99912393 Msa0968650:five_prime_UTR 30.0%
AAATGAGGTGGAAAGTAAAA+TGG - chr6_3:99912443-99912462 Msa0968650:five_prime_UTR 30.0%
TTTATGTAAACTGGTTAACC+TGG - chr6_3:99912559-99912578 Msa0968650:intron 30.0%
TTATGTAAACTGGTTAACCT+GGG - chr6_3:99912560-99912579 Msa0968650:intron 30.0%
CATATACCAAATTAATACCC+AGG + chr6_3:99912580-99912599 None:intergenic 30.0%
!! TTGGATTGTATTGACTTTGT+GGG + chr6_3:99913086-99913105 None:intergenic 30.0%
AAATGTGACTAGTATCTTAG+GGG + chr6_3:99913178-99913197 None:intergenic 30.0%
AATACTAGTCACATTGAAGA+AGG - chr6_3:99913254-99913273 Msa0968650:intron 30.0%
!! TGTGAAGTAGTATTTTGGAA+AGG + chr6_3:99913448-99913467 None:intergenic 30.0%
! TGTAGTGTGAAGTAGTATTT+TGG + chr6_3:99913453-99913472 None:intergenic 30.0%
ACTATGGCAAACAAATATGA+GGG - chr6_3:99913543-99913562 Msa0968650:intron 30.0%
TAAATTACCAAAGACAGTGT+TGG + chr6_3:99913754-99913773 None:intergenic 30.0%
AAAGTAAACAAGCCCTAAAA+TGG + chr6_3:99913877-99913896 None:intergenic 30.0%
!!! AATTTTTTGCAGATGCAAAG+AGG - chr6_3:99913969-99913988 Msa0968650:intron 30.0%
TTGTAGTTCACAAGAATTGT+CGG + chr6_3:99914082-99914101 None:intergenic 30.0%
ACAATTCTTGTGAACTACAA+GGG - chr6_3:99914082-99914101 Msa0968650:intron 30.0%
GTAATTACTGCATTCTTAAC+AGG + chr6_3:99914193-99914212 None:intergenic 30.0%
! ATTTTTATCTTTGACCTTGG+CGG - chr6_3:99914367-99914386 Msa0968650:intron 30.0%
AAATAAGGTCTTTGATGTCA+AGG - chr6_3:99914423-99914442 Msa0968650:intron 30.0%
! TGAAGACTTTGATAACAGAA+TGG - chr6_3:99914474-99914493 Msa0968650:intron 30.0%
AAGAACAAAGAGGATATTAG+TGG - chr6_3:99914525-99914544 Msa0968650:intron 30.0%
AGAACAAAGAGGATATTAGT+GGG - chr6_3:99914526-99914545 Msa0968650:intron 30.0%
TACCTTGATATATAGCATCT+AGG + chr6_3:99914635-99914654 None:intergenic 30.0%
! ACTTTTGTTCATCAATCACT+CGG - chr6_3:99914658-99914677 Msa0968650:intron 30.0%
CATATTCAATTGCTCAAACT+TGG + chr6_3:99914685-99914704 None:intergenic 30.0%
CAAGTTTGAGCAATTGAATA+TGG - chr6_3:99914683-99914702 Msa0968650:intron 30.0%
! TGTACATACACTTTTCAAAG+AGG + chr6_3:99914710-99914729 None:intergenic 30.0%
!! TATTGCAGGAGTTTTTCAAA+GGG - chr6_3:99914829-99914848 Msa0968650:intron 30.0%
! TATTCTTTAGTCCTTTTGAC+AGG + chr6_3:99915044-99915063 None:intergenic 30.0%
CTTTAATTAAGACAGTGCTT+TGG + chr6_3:99915085-99915104 None:intergenic 30.0%
! TAAAGCATACTTTGAAAGGA+TGG + chr6_3:99915190-99915209 None:intergenic 30.0%
AGAAGATATCTTTGTGTTTG+TGG - chr6_3:99915532-99915551 Msa0968650:intron 30.0%
AAGAAGAACGACGAAAACAA+TGG + chr6_3:99906202-99906221 None:intergenic 35.0%
!! ATACCGTTGTTTTGTTCTCA+CGG + chr6_3:99906257-99906276 None:intergenic 35.0%
TACAGAAAGATTTCAGGGTT+TGG + chr6_3:99906527-99906546 None:intergenic 35.0%
TTTACAAGGTAACAAGGGAT+TGG + chr6_3:99906570-99906589 None:intergenic 35.0%
!!! ATTGTGTTTTGATTGACACG+TGG - chr6_3:99906619-99906638 Msa0968650:three_prime_UTR 35.0%
!!! TTGTGTTTTGATTGACACGT+GGG - chr6_3:99906620-99906639 Msa0968650:three_prime_UTR 35.0%
! GGTTGTGCTTATTCTGTTTT+TGG - chr6_3:99906652-99906671 Msa0968650:three_prime_UTR 35.0%
TCTCAGGAATTTCATCAAAC+AGG + chr6_3:99906699-99906718 None:intergenic 35.0%
AGCATATCTACAAATCATCG+AGG + chr6_3:99906740-99906759 None:intergenic 35.0%
GAAGTGAAAAACTGAAGAAG+AGG - chr6_3:99906818-99906837 Msa0968650:three_prime_UTR 35.0%
TGAAAAACTGAAGAAGAGGA+TGG - chr6_3:99906822-99906841 Msa0968650:three_prime_UTR 35.0%
TAACCCCTTTGTTCAATTTG+CGG - chr6_3:99907013-99907032 Msa0968650:three_prime_UTR 35.0%
AATCCGCAAATTGAACAAAG+GGG + chr6_3:99907019-99907038 None:intergenic 35.0%
GAAATCCGCAAATTGAACAA+AGG + chr6_3:99907021-99907040 None:intergenic 35.0%
! CTTTTATGATTGACTGACAC+AGG - chr6_3:99907048-99907067 Msa0968650:three_prime_UTR 35.0%
!! AGGTAATTGGTTTGTGTTTG+TGG - chr6_3:99907161-99907180 Msa0968650:three_prime_UTR 35.0%
!! GCTGAGTTTCTAAAATGGTA+GGG - chr6_3:99907244-99907263 Msa0968650:three_prime_UTR 35.0%
! GACACTGAAGGCATAATAAA+TGG - chr6_3:99907273-99907292 Msa0968650:three_prime_UTR 35.0%
! TTTGTGGAGGTTTTCTGAAT+AGG - chr6_3:99907337-99907356 Msa0968650:three_prime_UTR 35.0%
TGAATAGGTTACTCGATACT+AGG - chr6_3:99907352-99907371 Msa0968650:three_prime_UTR 35.0%
GAATAGGTTACTCGATACTA+GGG - chr6_3:99907353-99907372 Msa0968650:three_prime_UTR 35.0%
AATAGGTTACTCGATACTAG+GGG - chr6_3:99907354-99907373 Msa0968650:three_prime_UTR 35.0%
TAGGGGAGTTAAGAAAATCA+TGG - chr6_3:99907371-99907390 Msa0968650:three_prime_UTR 35.0%
AGGGGAGTTAAGAAAATCAT+GGG - chr6_3:99907372-99907391 Msa0968650:three_prime_UTR 35.0%
!! GTTGATGGTGCTCAAATTAT+TGG - chr6_3:99907404-99907423 Msa0968650:CDS 35.0%
GAACATGTCTAAGTCCTTAT+AGG - chr6_3:99907704-99907723 Msa0968650:CDS 35.0%
! AAAGGAAATGGACTCCTATA+AGG + chr6_3:99907721-99907740 None:intergenic 35.0%
! TTTCCTTTTGCAGCTAACAA+TGG - chr6_3:99908056-99908075 Msa0968650:intron 35.0%
!!! AGTTTTAGCTGAGATGAAGT+TGG - chr6_3:99908131-99908150 Msa0968650:intron 35.0%
!!! GTTTTAGCTGAGATGAAGTT+GGG - chr6_3:99908132-99908151 Msa0968650:intron 35.0%
GGAGAATTTATGCTACCTAA+AGG - chr6_3:99908153-99908172 Msa0968650:intron 35.0%
AACTACATGTAGATGCCTTT+AGG + chr6_3:99908171-99908190 None:intergenic 35.0%
GCATCTACATGTAGTTATTC+TGG - chr6_3:99908175-99908194 Msa0968650:intron 35.0%
AGATTGAACTTTGTAGCATC+TGG + chr6_3:99908234-99908253 None:intergenic 35.0%
GCATATATACCATTTGGACT+TGG - chr6_3:99908300-99908319 Msa0968650:CDS 35.0%
! CCATTTTATACACAGGACAA+TGG + chr6_3:99908428-99908447 None:intergenic 35.0%
CCATTGTCCTGTGTATAAAA+TGG - chr6_3:99908425-99908444 Msa0968650:five_prime_UTR 35.0%
! AGAAGTCGTACACCATATTT+TGG + chr6_3:99908459-99908478 None:intergenic 35.0%
ATGTACAAGATAGAAGACAC+CGG + chr6_3:99908655-99908674 None:intergenic 35.0%
AAAAAGCAGGGATGTGATTT+AGG - chr6_3:99908990-99909009 Msa0968650:intron 35.0%
ATAAGGAACACAGTACATCT+GGG + chr6_3:99909061-99909080 None:intergenic 35.0%
! CTGTGTTCCTTATCTCATTT+TGG - chr6_3:99909068-99909087 Msa0968650:intron 35.0%
TTATTATTTGCAACCTACGC+TGG - chr6_3:99909193-99909212 Msa0968650:intron 35.0%
! ACAGGTTTTCCATATTGTAC+AGG - chr6_3:99909232-99909251 Msa0968650:intron 35.0%
CAAAGAACCTTCATAGATTG+AGG + chr6_3:99909286-99909305 None:intergenic 35.0%
CTCAATCTATGAAGGTTCTT+TGG - chr6_3:99909284-99909303 Msa0968650:intron 35.0%
CATATCTCTGTCAAGTAACA+TGG + chr6_3:99909526-99909545 None:intergenic 35.0%
! CATGTTACTTGACAGAGATA+TGG - chr6_3:99909524-99909543 Msa0968650:intron 35.0%
AGATATCAACAGAATTGGAC+GGG + chr6_3:99909570-99909589 None:intergenic 35.0%
GAGATATCAACAGAATTGGA+CGG + chr6_3:99909571-99909590 None:intergenic 35.0%
! GAGGAAGTACAGAAGAATAT+TGG - chr6_3:99909594-99909613 Msa0968650:intron 35.0%
TATATCAGTTAGAACCCAAC+AGG - chr6_3:99909617-99909636 Msa0968650:intron 35.0%
ATATCAGTTAGAACCCAACA+GGG - chr6_3:99909618-99909637 Msa0968650:intron 35.0%
GTTTCGTGTTCCTTAACTAT+GGG + chr6_3:99909648-99909667 None:intergenic 35.0%
CTGTTGATGTTCCTTAACTA+TGG - chr6_3:99909672-99909691 Msa0968650:intron 35.0%
GAAAGTAGAACACTGTGAAT+TGG - chr6_3:99910083-99910102 Msa0968650:intron 35.0%
! TGAATTGGTTCATGTGATTG+TGG - chr6_3:99910098-99910117 Msa0968650:intron 35.0%
GGCAATACAAATACGATTAG+CGG + chr6_3:99910124-99910143 None:intergenic 35.0%
! CATGAACCCAATGCTTATTT+TGG + chr6_3:99910259-99910278 None:intergenic 35.0%
ATCAGTATCCACAAACTGTT+CGG + chr6_3:99910323-99910342 None:intergenic 35.0%
TACTGATACAGAATTACCCT+TGG - chr6_3:99910336-99910355 Msa0968650:intron 35.0%
!! ATTACGGCTGTCTATTTTTC+AGG - chr6_3:99910541-99910560 Msa0968650:intron 35.0%
!! TTACGGCTGTCTATTTTTCA+GGG - chr6_3:99910542-99910561 Msa0968650:intron 35.0%
! AAAGCATTTCAACGTTTCCA+TGG - chr6_3:99910581-99910600 Msa0968650:intron 35.0%
!! ACAAAAACTTGTTAAGTCGG+CGG - chr6_3:99911024-99911043 Msa0968650:intron 35.0%
TTCTTATGACAGGAGCTATT+AGG - chr6_3:99911145-99911164 Msa0968650:intron 35.0%
CTAGATAGGACCATAATAGA+TGG + chr6_3:99911284-99911303 None:intergenic 35.0%
GACTTATTAGCTATGAAGCA+CGG - chr6_3:99911373-99911392 Msa0968650:five_prime_UTR 35.0%
CATTGCTTCATCAATCAACT+AGG + chr6_3:99911614-99911633 None:intergenic 35.0%
!! GTATTGGAATTCAAGTTGAG+TGG - chr6_3:99911727-99911746 Msa0968650:intron 35.0%
TTTAACCAATGTACCTTCCT+AGG + chr6_3:99912020-99912039 None:intergenic 35.0%
! AGGAAGGTACATTGGTTAAA+TGG - chr6_3:99912020-99912039 Msa0968650:intron 35.0%
! GGAAGGTACATTGGTTAAAT+GGG - chr6_3:99912021-99912040 Msa0968650:intron 35.0%
! TACATTGGTTAAATGGGAGA+GGG - chr6_3:99912027-99912046 Msa0968650:intron 35.0%
! CTTGAGAGAGTGTAACAAAT+TGG - chr6_3:99912056-99912075 Msa0968650:intron 35.0%
AGATATGGAAAGAATGTTGG+AGG - chr6_3:99912124-99912143 Msa0968650:intron 35.0%
TGTGAAAGTCAAACTGTCAA+AGG - chr6_3:99912178-99912197 Msa0968650:intron 35.0%
! AGTCAAACTGTCAAAGGTTT+TGG - chr6_3:99912184-99912203 Msa0968650:intron 35.0%
! AGAGTGGTATTGAATTTGAG+AGG - chr6_3:99912267-99912286 Msa0968650:intron 35.0%
! GGACAATTTTATGTTCTTGG+TGG - chr6_3:99912370-99912389 Msa0968650:five_prime_UTR 35.0%
GGTTAACCTGGGTATTAATT+TGG - chr6_3:99912571-99912590 Msa0968650:intron 35.0%
!! GTTGGATTGTATTGACTTTG+TGG + chr6_3:99913087-99913106 None:intergenic 35.0%
AATGTGACTAGTATCTTAGG+GGG + chr6_3:99913177-99913196 None:intergenic 35.0%
ACTAGCTATCACATTGAAGA+AGG - chr6_3:99913303-99913322 Msa0968650:intron 35.0%
CATTGAAGAAGGAAAAGTCA+TGG - chr6_3:99913314-99913333 Msa0968650:intron 35.0%
! TTCATTCACTTGAAGCACTA+TGG - chr6_3:99913527-99913546 Msa0968650:intron 35.0%
CACTATGGCAAACAAATATG+AGG - chr6_3:99913542-99913561 Msa0968650:intron 35.0%
TTAGTGAAAGCAACACAAGA+AGG + chr6_3:99913678-99913697 None:intergenic 35.0%
TTGCTTTCACTAATTCCCAA+AGG - chr6_3:99913685-99913704 Msa0968650:five_prime_UTR 35.0%
! GTTAGAAGAAGCCTGATTTT+TGG + chr6_3:99913727-99913746 None:intergenic 35.0%
ATGCAAAGAGGTTAATTGGA+AGG - chr6_3:99913981-99914000 Msa0968650:intron 35.0%
CAGTAGATCATTCTGAACAA+TGG + chr6_3:99914020-99914039 None:intergenic 35.0%
TTCAGAATGATCTACTGTTG+TGG - chr6_3:99914023-99914042 Msa0968650:intron 35.0%
GACAATTCTTGTGAACTACA+AGG - chr6_3:99914081-99914100 Msa0968650:intron 35.0%
!! CACAATTAGCTCTCTTTTGA+AGG + chr6_3:99914333-99914352 None:intergenic 35.0%
AATGGTGAATCACTTTGTGA+AGG - chr6_3:99914492-99914511 Msa0968650:intron 35.0%
TATAGCATCTAGGTCAATTG+TGG + chr6_3:99914625-99914644 None:intergenic 35.0%
GACCTAGATGCTATATATCA+AGG - chr6_3:99914630-99914649 Msa0968650:intron 35.0%
! CTTTTGTTCATCAATCACTC+GGG - chr6_3:99914659-99914678 Msa0968650:intron 35.0%
! CTGTCTTGTTGATGCTAAAA+TGG - chr6_3:99914740-99914759 Msa0968650:intron 35.0%
!! CTATTGCAGGAGTTTTTCAA+AGG - chr6_3:99914828-99914847 Msa0968650:intron 35.0%
! ATTGACTTACCAAGTGACAA+TGG + chr6_3:99914975-99914994 None:intergenic 35.0%
! TGTCACTTGGTAAGTCAATT+AGG - chr6_3:99914976-99914995 Msa0968650:intron 35.0%
GTCACTTGGTAAGTCAATTA+GGG - chr6_3:99914977-99914996 Msa0968650:intron 35.0%
TCACTTGGTAAGTCAATTAG+GGG - chr6_3:99914978-99914997 Msa0968650:intron 35.0%
TAGGGGAGATATTATGAATG+TGG - chr6_3:99914995-99915014 Msa0968650:intron 35.0%
TTATGAATGTGGTGATTCCA+AGG - chr6_3:99915006-99915025 Msa0968650:intron 35.0%
! TTTAGTCCTTTTGACAGGAA+TGG + chr6_3:99915039-99915058 None:intergenic 35.0%
TGCTTTACAATAGATGCTGA+TGG - chr6_3:99915203-99915222 Msa0968650:intron 35.0%
ATGAGAAGGGAAGATTATCA+AGG - chr6_3:99915288-99915307 Msa0968650:intron 35.0%
TGAGAAGGGAAGATTATCAA+GGG - chr6_3:99915289-99915308 Msa0968650:intron 35.0%
ACAAATTGACAGAATGATCC+AGG - chr6_3:99915313-99915332 Msa0968650:intron 35.0%
AGTTGAAGCAAGAAATGCTT+TGG - chr6_3:99915379-99915398 Msa0968650:intron 35.0%
TTGATCTTCTCTTTGTCTAC+AGG + chr6_3:99915467-99915486 None:intergenic 35.0%
ACCAAGGGAAAAAGTTTGAT+TGG - chr6_3:99915497-99915516 Msa0968650:intron 35.0%
!! ACCAATCAAACTTTTTCCCT+TGG + chr6_3:99915501-99915520 None:intergenic 35.0%
ACACAAAGATATCTTCTTGC+TGG + chr6_3:99915529-99915548 None:intergenic 35.0%
CTCTGATGAGAAAAGTGATT+CGG - chr6_3:99915616-99915635 Msa0968650:intron 35.0%
ACGACGAAAACAATGGATGT+GGG + chr6_3:99906195-99906214 None:intergenic 40.0%
AACGACGAAAACAATGGATG+TGG + chr6_3:99906196-99906215 None:intergenic 40.0%
GATTTCAGGGTTTGGAAAAG+AGG + chr6_3:99906519-99906538 None:intergenic 40.0%
! TGAGCGTGAACTTGTTTACA+AGG + chr6_3:99906584-99906603 None:intergenic 40.0%
! AGAGAAGGGAGAACCATTTT+AGG - chr6_3:99906786-99906805 Msa0968650:three_prime_UTR 40.0%
! GAGAAGGGAGAACCATTTTA+GGG - chr6_3:99906787-99906806 Msa0968650:three_prime_UTR 40.0%
CTTCTGAGTGTACCCTAAAA+TGG + chr6_3:99906802-99906821 None:intergenic 40.0%
GAGGATGGAAACATGTATCA+AGG - chr6_3:99906837-99906856 Msa0968650:three_prime_UTR 40.0%
GATGGAAACATGTATCAAGG+AGG - chr6_3:99906840-99906859 Msa0968650:three_prime_UTR 40.0%
ATCAAGGAGGTGAATAAGAG+AGG - chr6_3:99906853-99906872 Msa0968650:three_prime_UTR 40.0%
! TGCAATTGATTCAGGTCTGT+AGG - chr6_3:99907141-99907160 Msa0968650:three_prime_UTR 40.0%
GATTCAGGTCTGTAGGTAAT+TGG - chr6_3:99907148-99907167 Msa0968650:three_prime_UTR 40.0%
!! GGCTGAGTTTCTAAAATGGT+AGG - chr6_3:99907243-99907262 Msa0968650:three_prime_UTR 40.0%
AGATGCAACCTTCGACAATT+AGG - chr6_3:99907628-99907647 Msa0968650:CDS 40.0%
TATATGTGGCACACGTTCAA+TGG - chr6_3:99907813-99907832 Msa0968650:CDS 40.0%
TATATGTGGCACACGTTCAA+TGG - chr6_3:99907813-99907832 Msa0968650:CDS 40.0%
TATATGTGGCACACGTTCAA+TGG - chr6_3:99907813-99907832 Msa0968650:CDS 40.0%
TCACCATTGTTAGCTGCAAA+AGG + chr6_3:99908062-99908081 None:intergenic 40.0%
CCAAATGGTATATATGCTCG+AGG + chr6_3:99908297-99908316 None:intergenic 40.0%
CCTCGAGCATATATACCATT+TGG - chr6_3:99908294-99908313 Msa0968650:CDS 40.0%
ACAGGACAATGGCGATAATT+TGG + chr6_3:99908417-99908436 None:intergenic 40.0%
TGTACGACTTCTTGTTAGCA+AGG - chr6_3:99908467-99908486 Msa0968650:five_prime_UTR 40.0%
GATAAGGAACACAGTACATC+TGG + chr6_3:99909062-99909081 None:intergenic 40.0%
TTTGTGCAGCTTCTGACATT+TGG - chr6_3:99909123-99909142 Msa0968650:intron 40.0%
! GGCTCTTTTCCATATTGTAC+AGG - chr6_3:99909214-99909233 Msa0968650:intron 40.0%
TATGAAGGTTCTTTGGACCT+GGG - chr6_3:99909291-99909310 Msa0968650:intron 40.0%
ACAGCTACCGAGTTCATAAT+TGG - chr6_3:99909358-99909377 Msa0968650:intron 40.0%
GAAAATGTTGGGACGTTTGT+AGG - chr6_3:99909451-99909470 Msa0968650:intron 40.0%
CGTTTCGTGTTCCTTAACTA+TGG + chr6_3:99909649-99909668 None:intergenic 40.0%
GAAAACACATTCACAGCAGT+TGG + chr6_3:99910145-99910164 None:intergenic 40.0%
AAAACAGCGAGTAAATACCC+AGG + chr6_3:99910230-99910249 None:intergenic 40.0%
TCAGTATCCACAAACTGTTC+GGG + chr6_3:99910322-99910341 None:intergenic 40.0%
!! TTTTCAGGGAGAAAGAAAGG+TGG - chr6_3:99910556-99910575 Msa0968650:intron 40.0%
TTTCAGGGAGAAAGAAAGGT+GGG - chr6_3:99910557-99910576 Msa0968650:intron 40.0%
AACTTGTACCTCATAGACCA+TGG + chr6_3:99910601-99910620 None:intergenic 40.0%
! TGTAGAACAACAGAAGCATG+AGG - chr6_3:99910826-99910845 Msa0968650:intron 40.0%
ATAGTTTGGCCTGATTGAGA+AGG - chr6_3:99910893-99910912 Msa0968650:intron 40.0%
TAGTTTGGCCTGATTGAGAA+GGG - chr6_3:99910894-99910913 Msa0968650:intron 40.0%
TATGACAGGAGCTATTAGGT+CGG - chr6_3:99911149-99911168 Msa0968650:intron 40.0%
TTAGCTATGAAGCACGGATA+CGG - chr6_3:99911379-99911398 Msa0968650:five_prime_UTR 40.0%
GTAATCACAAGTGTCAGTGT+CGG - chr6_3:99911476-99911495 Msa0968650:intron 40.0%
! TCTTTTGATACGTCGGGTAT+TGG - chr6_3:99911711-99911730 Msa0968650:intron 40.0%
!! TGGTTAGTTCTACGTCAACT+GGG - chr6_3:99911747-99911766 Msa0968650:five_prime_UTR 40.0%
ACTGGGAATGGAGAAAATGT+TGG - chr6_3:99911764-99911783 Msa0968650:five_prime_UTR 40.0%
! TAGTGTTGTTACGATCTCCT+AGG - chr6_3:99911840-99911859 Msa0968650:five_prime_UTR 40.0%
!!! GCGGGTTTTGAATACTGTAT+TGG + chr6_3:99911998-99912017 None:intergenic 40.0%
! GTACATTGGTTAAATGGGAG+AGG - chr6_3:99912026-99912045 Msa0968650:intron 40.0%
TATGGAAAGAATGTTGGAGG+AGG - chr6_3:99912127-99912146 Msa0968650:intron 40.0%
AGGAGGTGAAAATCAGTTCT+TGG - chr6_3:99912144-99912163 Msa0968650:intron 40.0%
! GAAAAGAAGTACAACACTGC+AGG - chr6_3:99912332-99912351 Msa0968650:intron 40.0%
TGCAGGCATAGAAGAAGTAA+GGG - chr6_3:99912349-99912368 Msa0968650:five_prime_UTR 40.0%
TGGAAGTGGGTGATAGAAAT+GGG - chr6_3:99912399-99912418 Msa0968650:five_prime_UTR 40.0%
ATCTTGGCGAGTCTTCTATT+TGG - chr6_3:99912529-99912548 Msa0968650:intron 40.0%
TCTTGGCGAGTCTTCTATTT+GGG - chr6_3:99912530-99912549 Msa0968650:intron 40.0%
ATGTGACTAGTATCTTAGGG+GGG + chr6_3:99913176-99913195 None:intergenic 40.0%
CTTCAATGTGATAGCTAGTG+AGG + chr6_3:99913302-99913321 None:intergenic 40.0%
GAAAAGTCATGGCTTCTGAT+AGG - chr6_3:99913325-99913344 Msa0968650:intron 40.0%
AAATATGAGGGAGTTGCGAT+TGG - chr6_3:99913555-99913574 Msa0968650:intron 40.0%
ACTAATTCCCAAAGGCTGAT+TGG - chr6_3:99913693-99913712 Msa0968650:five_prime_UTR 40.0%
!! TACCAAAGACAGTGTTGGTT+GGG + chr6_3:99913749-99913768 None:intergenic 40.0%
!! TTACCAAAGACAGTGTTGGT+TGG + chr6_3:99913750-99913769 None:intergenic 40.0%
AACAAGCCCTAAAATGGTGA+TGG + chr6_3:99913871-99913890 None:intergenic 40.0%
GCAGATGCAAAGAGGTTAAT+TGG - chr6_3:99913977-99913996 Msa0968650:intron 40.0%
!!! AGAGATTGCAGAGGCATTTT+TGG - chr6_3:99914162-99914181 Msa0968650:intron 40.0%
AAAGATGCAGGTGAAATTGC+TGG - chr6_3:99914253-99914272 Msa0968650:intron 40.0%
! TTGCTGGTCTCAATGTAATG+CGG - chr6_3:99914269-99914288 Msa0968650:intron 40.0%
AGTTCAGAGGAAGAACAAAG+AGG - chr6_3:99914515-99914534 Msa0968650:intron 40.0%
GACACTTTGATACGACATTG+AGG - chr6_3:99914599-99914618 Msa0968650:intron 40.0%
TGCAATAGCTGCTTCACTTT+AGG + chr6_3:99914816-99914835 None:intergenic 40.0%
TAAAGTGAAGCAGCTATTGC+AGG - chr6_3:99914815-99914834 Msa0968650:intron 40.0%
!! CGTTAAGAGTGTTCCAATCT+TGG - chr6_3:99914932-99914951 Msa0968650:intron 40.0%
ACATCTCGCAAAACCAAGAT+TGG + chr6_3:99914948-99914967 None:intergenic 40.0%
GATGTTACACCATTGTCACT+TGG - chr6_3:99914963-99914982 Msa0968650:intron 40.0%
ACACTTCCATTCCTGTCAAA+AGG - chr6_3:99915030-99915049 Msa0968650:intron 40.0%
! AATTTTGAACGTCTCTGCAG+TGG - chr6_3:99915226-99915245 Msa0968650:intron 40.0%
GAGAAGGGAAGATTATCAAG+GGG - chr6_3:99915290-99915309 Msa0968650:intron 40.0%
ATCAACTCAGCAATGACCAA+GGG - chr6_3:99915482-99915501 Msa0968650:intron 40.0%
GAGCATCTTTGAATCTGCTA+TGG - chr6_3:99915574-99915593 Msa0968650:intron 40.0%
GCTATGGACAAGATCAACAA+AGG - chr6_3:99915590-99915609 Msa0968650:intron 40.0%
!! TTGTTTTGTTCTCACGGCAG+CGG + chr6_3:99906251-99906270 None:intergenic 45.0%
CTGCCGTGAGAACAAAACAA+CGG - chr6_3:99906251-99906270 Msa0968650:three_prime_UTR 45.0%
TTGACACGTGGGTAATAGTC+TGG - chr6_3:99906631-99906650 Msa0968650:three_prime_UTR 45.0%
TCTCTGTCTTAGAGGAGGAA+CGG + chr6_3:99906771-99906790 None:intergenic 45.0%
!! TTCCTCCTCTAAGACAGAGA+AGG - chr6_3:99906771-99906790 Msa0968650:three_prime_UTR 45.0%
!! TCCTCCTCTAAGACAGAGAA+GGG - chr6_3:99906772-99906791 Msa0968650:three_prime_UTR 45.0%
TTCTCCCTTCTCTGTCTTAG+AGG + chr6_3:99906779-99906798 None:intergenic 45.0%
! GGTGAATAAGAGAGGTGTGA+AGG - chr6_3:99906861-99906880 Msa0968650:three_prime_UTR 45.0%
GTAGGGCTAAATGACACTGA+AGG - chr6_3:99907261-99907280 Msa0968650:three_prime_UTR 45.0%
CATGGGATCATGGAAGTTGA+TGG - chr6_3:99907389-99907408 Msa0968650:exon 45.0%
GACCTCTAGACCCAATAACT+GGG + chr6_3:99907438-99907457 None:intergenic 45.0%
AGACCTCTAGACCCAATAAC+TGG + chr6_3:99907439-99907458 None:intergenic 45.0%
! ATTTTACAAGCCTGCAGTCG+TGG - chr6_3:99908098-99908117 Msa0968650:intron 45.0%
CATCTCAGCTAAAACTTCCC+TGG + chr6_3:99908127-99908146 None:intergenic 45.0%
TGCATCGTGACGCTGATAAT+TGG - chr6_3:99908205-99908224 Msa0968650:CDS 45.0%
GCATCGTGACGCTGATAATT+GGG - chr6_3:99908206-99908225 Msa0968650:CDS 45.0%
CATCGTGACGCTGATAATTG+GGG - chr6_3:99908207-99908226 Msa0968650:CDS 45.0%
! GCTTCTGACATTTGGAGTGT+TGG - chr6_3:99909131-99909150 Msa0968650:intron 45.0%
ATATGGAAAAGAGCCAGCGT+AGG + chr6_3:99909209-99909228 None:intergenic 45.0%
CTATGAAGGTTCTTTGGACC+TGG - chr6_3:99909290-99909309 Msa0968650:intron 45.0%
! AGTACGCAACCTGCTGATTA+AGG - chr6_3:99909425-99909444 Msa0968650:intron 45.0%
AATGTTGGGACGTTTGTAGG+TGG - chr6_3:99909454-99909473 Msa0968650:intron 45.0%
TAGGTGGTTAGGTTCAGAGT+TGG - chr6_3:99909470-99909489 Msa0968650:intron 45.0%
! GGTTAGGTTCAGAGTTGGTT+AGG - chr6_3:99909475-99909494 Msa0968650:intron 45.0%
! TAGGTTCAGAGTTGGTTAGG+CGG - chr6_3:99909478-99909497 Msa0968650:intron 45.0%
!! AACTATGGGAGTACCCTGTT+GGG + chr6_3:99909634-99909653 None:intergenic 45.0%
!! TAACTATGGGAGTACCCTGT+TGG + chr6_3:99909635-99909654 None:intergenic 45.0%
! ACAGGGTACTCCCATAGTTA+AGG - chr6_3:99909635-99909654 Msa0968650:intron 45.0%
GTTGGGTACTCCCATAGTTA+AGG + chr6_3:99909686-99909705 None:intergenic 45.0%
!! GTTGCTGGTTTGCTCTCAAA+AGG + chr6_3:99910167-99910186 None:intergenic 45.0%
TGGTGATAGCCATAAACTGC+AGG - chr6_3:99910197-99910216 Msa0968650:intron 45.0%
CAACGTTTCCATGGTCTATG+AGG - chr6_3:99910590-99910609 Msa0968650:intron 45.0%
!! GTGGTTAGTTCTACGTCAAC+TGG - chr6_3:99911746-99911765 Msa0968650:five_prime_UTR 45.0%
AGTTCTACGTCAACTGGGAA+TGG - chr6_3:99911752-99911771 Msa0968650:five_prime_UTR 45.0%
!! TAAACTCCCAAAGAGTGCCT+AGG + chr6_3:99911860-99911879 None:intergenic 45.0%
! TAGGCACTCTTTGGGAGTTT+AGG - chr6_3:99911859-99911878 Msa0968650:five_prime_UTR 45.0%
! AGGCACTCTTTGGGAGTTTA+GGG - chr6_3:99911860-99911879 Msa0968650:five_prime_UTR 45.0%
! ACTCTTTGGGAGTTTAGGGA+AGG - chr6_3:99911864-99911883 Msa0968650:five_prime_UTR 45.0%
! CTCTTTGGGAGTTTAGGGAA+GGG - chr6_3:99911865-99911884 Msa0968650:five_prime_UTR 45.0%
! TCTTTGGGAGTTTAGGGAAG+GGG - chr6_3:99911866-99911885 Msa0968650:five_prime_UTR 45.0%
TATTGGCATAGGGTTGTGGA+GGG + chr6_3:99911981-99912000 None:intergenic 45.0%
! ACTGTATTGGCATAGGGTTG+TGG + chr6_3:99911985-99912004 None:intergenic 45.0%
ACAGTATTCAAAACCCGCCT+AGG - chr6_3:99912000-99912019 Msa0968650:intron 45.0%
TATTCAAAACCCGCCTAGGA+AGG - chr6_3:99912004-99912023 Msa0968650:intron 45.0%
AACCAATGTACCTTCCTAGG+CGG + chr6_3:99912017-99912036 None:intergenic 45.0%
AAACCAGATAGTTTCGCTGC+AGG - chr6_3:99912290-99912309 Msa0968650:intron 45.0%
! TAGTTTCGCTGCAGGACTTT+TGG - chr6_3:99912298-99912317 Msa0968650:intron 45.0%
CTGCAGGCATAGAAGAAGTA+AGG - chr6_3:99912348-99912367 Msa0968650:intron 45.0%
TATGTTCTTGGTGGAAGGAC+TGG - chr6_3:99912379-99912398 Msa0968650:five_prime_UTR 45.0%
CTGGAAGTGGGTGATAGAAA+TGG - chr6_3:99912398-99912417 Msa0968650:five_prime_UTR 45.0%
AAGTGGGTGATAGAAATGGG+TGG - chr6_3:99912402-99912421 Msa0968650:five_prime_UTR 45.0%
GAGAGCAGATGGATGAAATG+AGG - chr6_3:99912428-99912447 Msa0968650:five_prime_UTR 45.0%
AGCAGATGGATGAAATGAGG+TGG - chr6_3:99912431-99912450 Msa0968650:five_prime_UTR 45.0%
! AGTATCTTAGGGGGGTGTAT+TGG + chr6_3:99913168-99913187 None:intergenic 45.0%
GTTGCGATTGGAATTGACCT+TGG - chr6_3:99913567-99913586 Msa0968650:intron 45.0%
CTTACTCGTGTGTTGGAGTA+TGG - chr6_3:99913595-99913614 Msa0968650:intron 45.0%
AGCATCACCAATCAGCCTTT+GGG + chr6_3:99913703-99913722 None:intergenic 45.0%
! TGGTGATGCTGCCAAAAATC+AGG - chr6_3:99913713-99913732 Msa0968650:five_prime_UTR 45.0%
AACCCAACCAACACTGTCTT+TGG - chr6_3:99913744-99913763 Msa0968650:five_prime_UTR 45.0%
TCTACTGTTGTGGCCCTTTA+AGG - chr6_3:99914033-99914052 Msa0968650:intron 45.0%
!! TGGCCCTTTAAGGTCATTTC+CGG - chr6_3:99914043-99914062 Msa0968650:intron 45.0%
GCACCGGAAATGACCTTAAA+GGG + chr6_3:99914049-99914068 None:intergenic 45.0%
! AGCACCGGAAATGACCTTAA+AGG + chr6_3:99914050-99914069 None:intergenic 45.0%
TCTTGTGAACTACAAGGGTG+AGG - chr6_3:99914087-99914106 Msa0968650:intron 45.0%
TTTATCTTTGACCTTGGCGG+TGG - chr6_3:99914370-99914389 Msa0968650:intron 45.0%
TATCAAAGTCTTCACCGCCT+AGG + chr6_3:99914468-99914487 None:intergenic 45.0%
CACTTTGTGAAGGAGTTCAG+AGG - chr6_3:99914502-99914521 Msa0968650:intron 45.0%
! TCAACCTCCTCAAGGCTTTT+GGG + chr6_3:99914554-99914573 None:intergenic 45.0%
GTTGAGAACTTCCTGTGAGA+GGG - chr6_3:99914569-99914588 Msa0968650:intron 45.0%
GTCGATGATGTTGTCCTTGT+TGG - chr6_3:99914774-99914793 Msa0968650:intron 45.0%
GATGATGTTGTCCTTGTTGG+TGG - chr6_3:99914777-99914796 Msa0968650:intron 45.0%
!! TCCTTGTTGGTGGTTCTTCT+AGG - chr6_3:99914787-99914806 Msa0968650:intron 45.0%
TCCTAGAAGAACCACCAACA+AGG + chr6_3:99914791-99914810 None:intergenic 45.0%
!! GCAGGAGTTTTTCAAAGGGA+AGG - chr6_3:99914833-99914852 Msa0968650:intron 45.0%
!! CAAGAGCATTAACCCTGATG+AGG - chr6_3:99914863-99914882 Msa0968650:intron 45.0%
!! ACAGGAATGGAAGTGTTCCT+TGG + chr6_3:99915026-99915045 None:intergenic 45.0%
! GCTAGTGAGAACAACTTGCT+TGG - chr6_3:99915128-99915147 Msa0968650:five_prime_UTR 45.0%
CCTTGAAATTCTCAGCTTCC+TGG + chr6_3:99915334-99915353 None:intergenic 45.0%
CCAGGAAGCTGAGAATTTCA+AGG - chr6_3:99915331-99915350 Msa0968650:intron 45.0%
GATCAACTCAGCAATGACCA+AGG - chr6_3:99915481-99915500 Msa0968650:intron 45.0%
!! AAAAGAAAAAAAAATTATAA+TGG + chr6_3:99910864-99910883 None:intergenic 5.0%
!! TAAAGATATATTATATTATA+CGG + chr6_3:99912939-99912958 None:intergenic 5.0%
!! TGTTTTGTTCTCACGGCAGC+GGG + chr6_3:99906250-99906269 None:intergenic 50.0%
TCCCTTCTCTGTCTTAGAGG+AGG + chr6_3:99906776-99906795 None:intergenic 50.0%
TGGCCATCATGCCCAGTTAT+TGG - chr6_3:99907424-99907443 Msa0968650:CDS 50.0%
GGCCATCATGCCCAGTTATT+GGG - chr6_3:99907425-99907444 Msa0968650:CDS 50.0%
GACCCAATAACTGGGCATGA+TGG + chr6_3:99907430-99907449 None:intergenic 50.0%
TGCCCAGTTATTGGGTCTAG+AGG - chr6_3:99907433-99907452 Msa0968650:CDS 50.0%
TCAGCGTCACGATGCAATGA+TGG + chr6_3:99908201-99908220 None:intergenic 50.0%
!! TGTCGACTCCCAAGTCCAAA+TGG + chr6_3:99908312-99908331 None:intergenic 50.0%
CTTGGGAGTCGACATTGTCA+AGG - chr6_3:99908318-99908337 Msa0968650:CDS 50.0%
TGGGACGTTTGTAGGTGGTT+AGG - chr6_3:99909459-99909478 Msa0968650:intron 50.0%
AACAGAATTGGACGGGAGTG+AGG + chr6_3:99909563-99909582 None:intergenic 50.0%
AGCAAACCAGCAACCTCTTG+TGG - chr6_3:99910173-99910192 Msa0968650:intron 50.0%
AACCAGCAACCTCTTGTGGT+TGG - chr6_3:99910177-99910196 Msa0968650:intron 50.0%
TGGCTATCACCAACCACAAG+AGG + chr6_3:99910189-99910208 None:intergenic 50.0%
GGATGCTCACCTGCAGTTTA+TGG + chr6_3:99910209-99910228 None:intergenic 50.0%
TAAACTGCAGGTGAGCATCC+TGG - chr6_3:99910209-99910228 Msa0968650:intron 50.0%
AAACTGCAGGTGAGCATCCT+GGG - chr6_3:99910210-99910229 Msa0968650:intron 50.0%
TCCAAAGCCCGAACAGTTTG+TGG - chr6_3:99910312-99910331 Msa0968650:intron 50.0%
TCCACAAACTGTTCGGGCTT+TGG + chr6_3:99910316-99910335 None:intergenic 50.0%
CAGTTCAGCCCTTCTCAATC+AGG + chr6_3:99910905-99910924 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+CGG - chr6_3:99911385-99911404 Msa0968650:intron 50.0%
ACACGACACATGTCCGACAA+CGG - chr6_3:99911512-99911531 Msa0968650:intron 50.0%
ACGATCTCCTAGGCACTCTT+TGG - chr6_3:99911850-99911869 Msa0968650:five_prime_UTR 50.0%
CGATCTCCTAGGCACTCTTT+GGG - chr6_3:99911851-99911870 Msa0968650:five_prime_UTR 50.0%
! GTATTGGCATAGGGTTGTGG+AGG + chr6_3:99911982-99912001 None:intergenic 50.0%
ACCAATGTACCTTCCTAGGC+GGG + chr6_3:99912016-99912035 None:intergenic 50.0%
! GATTGGTGGGTCTGTTAGAG+TGG - chr6_3:99912251-99912270 Msa0968650:intron 50.0%
AGTCCTGCAGCGAAACTATC+TGG + chr6_3:99912296-99912315 None:intergenic 50.0%
TTGGTGGAAGGACTGGAAGT+GGG - chr6_3:99912386-99912405 Msa0968650:five_prime_UTR 50.0%
CAGCATCACCAATCAGCCTT+TGG + chr6_3:99913704-99913723 None:intergenic 50.0%
!! TGTCGGTTTGTCATCAGCAC+CGG + chr6_3:99914065-99914084 None:intergenic 50.0%
CAATCTCTCGCATCTGTGAG+AGG + chr6_3:99914150-99914169 None:intergenic 50.0%
ACAGATGCGAGAGATTGCAG+AGG - chr6_3:99914153-99914172 Msa0968650:intron 50.0%
CGAAGAGCGACTAAAGATGC+AGG - chr6_3:99914241-99914260 Msa0968650:intron 50.0%
TATGCTAGAGCAGCTGCAGT+TGG + chr6_3:99914307-99914326 None:intergenic 50.0%
ACTGCAGCTGCTCTAGCATA+TGG - chr6_3:99914307-99914326 Msa0968650:intron 50.0%
CATCAAAAGTTCCACCGCCA+AGG + chr6_3:99914384-99914403 None:intergenic 50.0%
TTTGATGTCAAGGCCACTGC+TGG - chr6_3:99914433-99914452 Msa0968650:intron 50.0%
! CTCAACCTCCTCAAGGCTTT+TGG + chr6_3:99914555-99914574 None:intergenic 50.0%
GGAAGTTCTCAACCTCCTCA+AGG + chr6_3:99914562-99914581 None:intergenic 50.0%
GGTTGAGAACTTCCTGTGAG+AGG - chr6_3:99914568-99914587 Msa0968650:intron 50.0%
CTTCCTGTGAGAGGGCAAAA+AGG - chr6_3:99914577-99914596 Msa0968650:intron 50.0%
! TGTCCTTTTTGCCCTCTCAC+AGG + chr6_3:99914583-99914602 None:intergenic 50.0%
CGTAAGCAACAGCCTCATCA+GGG + chr6_3:99914878-99914897 None:intergenic 50.0%
! CCTGATGAGGCTGTTGCTTA+CGG - chr6_3:99914876-99914895 Msa0968650:intron 50.0%
TGCTTACGGTGCAGCTATTC+AGG - chr6_3:99914890-99914909 Msa0968650:intron 50.0%
! ACTTTGAAAGGATGGCCTCG+AGG + chr6_3:99915182-99915201 None:intergenic 50.0%
TCTGCAGTGGAAGAAACCAG+TGG - chr6_3:99915239-99915258 Msa0968650:intron 50.0%
TGCTTCCTCGTGCATAACGT+TGG - chr6_3:99915670-99915689 Msa0968650:intron 50.0%
CAGATCCAACGTTATGCACG+AGG + chr6_3:99915678-99915697 None:intergenic 50.0%
CTCGTGCATAACGTTGGATC+TGG - chr6_3:99915676-99915695 Msa0968650:intron 50.0%
CACCAACCACAAGAGGTTGC+TGG + chr6_3:99910182-99910201 None:intergenic 55.0%
TAAGTCGGCGGCGTTAGATC+AGG - chr6_3:99911036-99911055 Msa0968650:intron 55.0%
!! TCAGTGTCGGTGTCGTGTCA+CGG - chr6_3:99911489-99911508 Msa0968650:intron 55.0%
CACGACACATGTCCGACAAC+GGG - chr6_3:99911513-99911532 Msa0968650:intron 55.0%
GATTAGGCGTGTCCCGTTGT+CGG + chr6_3:99911528-99911547 None:intergenic 55.0%
GACAACGGGACACGCCTAAT+CGG - chr6_3:99911527-99911546 Msa0968650:intron 55.0%
GCATGGACACTCCTCCGATT+AGG + chr6_3:99911544-99911563 None:intergenic 55.0%
! ACCCGCCTAGGAAGGTACAT+TGG - chr6_3:99912012-99912031 Msa0968650:intron 55.0%
CTTGGTGGAAGGACTGGAAG+TGG - chr6_3:99912385-99912404 Msa0968650:five_prime_UTR 55.0%
CACACGAGTAAGTCGTGCCA+AGG + chr6_3:99913587-99913606 None:intergenic 55.0%
GGCACGACTTACTCGTGTGT+TGG - chr6_3:99913588-99913607 Msa0968650:intron 55.0%
GCATGAGCAGAACGATCGTG+TGG - chr6_3:99913617-99913636 Msa0968650:five_prime_UTR 55.0%
TAGGTGAGTGTCTCCAGCAG+TGG + chr6_3:99914449-99914468 None:intergenic 55.0%
ACTGCTGGAGACACTCACCT+AGG - chr6_3:99914448-99914467 Msa0968650:intron 55.0%
GTGGGAACCCAAAAGCCTTG+AGG - chr6_3:99914544-99914563 Msa0968650:intron 55.0%
GGAACCCAAAAGCCTTGAGG+AGG - chr6_3:99914547-99914566 Msa0968650:intron 55.0%
CCGTAAGCAACAGCCTCATC+AGG + chr6_3:99914879-99914898 None:intergenic 55.0%
TCTCCCCCACCGAACCATCA+CGG - chr6_3:99906221-99906240 Msa0968650:three_prime_UTR 60.0%
!! ATGCCGTGATGGTTCGGTGG+GGG + chr6_3:99906227-99906246 None:intergenic 60.0%
!! GATGCCGTGATGGTTCGGTG+GGG + chr6_3:99906228-99906247 None:intergenic 60.0%
!! GGATGCCGTGATGGTTCGGT+GGG + chr6_3:99906229-99906248 None:intergenic 60.0%
AGCGGGATGCCGTGATGGTT+CGG + chr6_3:99906233-99906252 None:intergenic 60.0%
ACGGATACGGACACGGACAC+CGG - chr6_3:99911392-99911411 Msa0968650:intron 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + chr6_3:99911414-99911433 None:intergenic 60.0%
AACGGGACACGCCTAATCGG+AGG - chr6_3:99911530-99911549 Msa0968650:intron 60.0%
ATGGGTGGCACGAGAGCAGA+TGG - chr6_3:99912417-99912436 Msa0968650:five_prime_UTR 60.0%
GCTGGAGACACTCACCTAGG+CGG - chr6_3:99914451-99914470 Msa0968650:intron 60.0%
TCACTTCCTCTCGCACCTCG+AGG - chr6_3:99915164-99915183 Msa0968650:intron 60.0%
! GGGATGCCGTGATGGTTCGG+TGG + chr6_3:99906230-99906249 None:intergenic 65.0%
AGCCTGCAGTCGTGGTCTCC+AGG - chr6_3:99908106-99908125 Msa0968650:intron 65.0%
GCCTGCAGTCGTGGTCTCCA+GGG - chr6_3:99908107-99908126 Msa0968650:intron 65.0%
TCCCTGGAGACCACGACTGC+AGG + chr6_3:99908111-99908130 None:intergenic 65.0%
CACGGACACCGGACACGACA+CGG - chr6_3:99911403-99911422 Msa0968650:intron 65.0%
ACGGCAGCGGGATGCCGTGA+TGG + chr6_3:99906238-99906257 None:intergenic 70.0%
GGATGGCCTCGAGGTGCGAG+AGG + chr6_3:99915173-99915192 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 99906173 99915791 99906173 ID=Msa0968650;Name=Msa0968650
chr6_3 mRNA 99906173 99915791 99906173 ID=Msa0968650-mRNA-1;Parent=Msa0968650;Name=Msa0968650-mRNA-1;_AED=0.17;_eAED=0.17;_QI=1091|1|1|1|0.25|0.44|9|1227|267
chr6_3 exon 99906173 99907983 99906173 ID=Msa0968650-mRNA-1:exon:18753;Parent=Msa0968650-mRNA-1
chr6_3 exon 99908199 99908527 99908199 ID=Msa0968650-mRNA-1:exon:18752;Parent=Msa0968650-mRNA-1
chr6_3 exon 99911353 99911401 99911353 ID=Msa0968650-mRNA-1:exon:18751;Parent=Msa0968650-mRNA-1
chr6_3 exon 99911746 99911886 99911746 ID=Msa0968650-mRNA-1:exon:18750;Parent=Msa0968650-mRNA-1
chr6_3 exon 99912349 99912491 99912349 ID=Msa0968650-mRNA-1:exon:18749;Parent=Msa0968650-mRNA-1
chr6_3 exon 99912711 99912860 99912711 ID=Msa0968650-mRNA-1:exon:18748;Parent=Msa0968650-mRNA-1
chr6_3 exon 99913596 99913895 99913596 ID=Msa0968650-mRNA-1:exon:18747;Parent=Msa0968650-mRNA-1
chr6_3 exon 99915082 99915180 99915082 ID=Msa0968650-mRNA-1:exon:18746;Parent=Msa0968650-mRNA-1
chr6_3 exon 99915692 99915791 99915692 ID=Msa0968650-mRNA-1:exon:18745;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99915692 99915791 99915692 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99915082 99915180 99915082 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99913596 99913895 99913596 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99912711 99912860 99912711 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99912349 99912491 99912349 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99911746 99911886 99911746 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99911353 99911401 99911353 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 five_prime_UTR 99908419 99908527 99908419 ID=Msa0968650-mRNA-1:five_prime_utr;Parent=Msa0968650-mRNA-1
chr6_3 CDS 99908199 99908418 99908199 ID=Msa0968650-mRNA-1:cds;Parent=Msa0968650-mRNA-1
chr6_3 CDS 99907400 99907983 99907400 ID=Msa0968650-mRNA-1:cds;Parent=Msa0968650-mRNA-1
chr6_3 three_prime_UTR 99906173 99907399 99906173 ID=Msa0968650-mRNA-1:three_prime_utr;Parent=Msa0968650-mRNA-1
Gene Sequence

>Msa0968650

ATGGCAAACAAATATGAGGGAGTTGCGATTGGAATTGACCTTGGCACGACTTACTCGTGTGTTGGAGTATGGCATGAGCAGAACGATCGTGTGGAAATTATTCACAATGATCAAGGAAACAAAACAACACCTTCTTGTGTTGCTTTCACTAATTCCCAAAGGCTGATTGGTGATGCTGCCAAAAATCAGGCTTCTTCTAACCCAACCAACACTGTCTTTGATGCAAAGAGGTTAATTGGAAGGAAATATAGTGATTCCATTGTTCAGAATGATCTACTGTTGTGGCCCTTTAAGGTCATTTCCGGTGCTGATGACAAACCGACAATTCTTGTGAACTACAAGGGTGAGGAAAAGCACTTTGTTGCTGAAGAAATATCATCTGTGATCCTCTCACAGATGCGAGAGATTGCAGAGGCATTTTTGGAGTCACCTGTTAAGAATGCAGTAATTACCGTACCTGCTTATTTTAATGATTCACAACGAAGAGCGACTAAAGATGCAGGTGAAATTGCTGGTCTCAATGTAATGCGGATTATCAATGAACCAACTGCAGCTGCTCTAGCATATGGCCTTCAAAAGAGAGCTAATTGTGTTGATAAGAGAAATATTTTTATCTTTGACCTTGGCGGTGGAACTTTTGATGTGTCTATTCTTACAATTAAAAATAAGGTCTTTGATGTCAAGGCCACTGCTGGAGACACTCACCTAGGCGGTGAAGACTTTGATAACAGAATGGTGAATCACTTTGTGAAGGAGTTCAGAGGAAGAACAAAGAGGATATTAGTGGGAACCCAAAAGCCTTGA
Protein sequence

>Msa0968650

MANKYEGVAIGIDLGTTYSCVGVWHEQNDRVEIIHNDQGNKTTPSCVAFTNSQRLIGDAAKNQASSNPTNTVFDAKRLIGRKYSDSIVQNDLLLWPFKVISGADDKPTILVNYKGEEKHFVAEEISSVILSQMREIAEAFLESPVKNAVITVPAYFNDSQRRATKDAGEIAGLNVMRIINEPTAAALAYGLQKRANCVDKRNIFIFDLGGGTFDVSILTIKNKVFDVKATAGDTHLGGEDFDNRMVNHFVKEFRGRTKRILVGTQKP*