AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0879770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0879770 MtrunA17_Chr7g0223711 87.218 266 34 0 1 266 1 266 1.73e-174 495
Msa0879770 MtrunA17_Chr7g0223701 88.372 258 30 0 1 258 1 258 2.56e-171 488
Msa0879770 MtrunA17_Chr8g0350731 86.090 266 37 0 1 266 29 294 4.29e-170 485
Msa0879770 MtrunA17_Chr7g0223621 82.331 266 47 0 1 266 1 266 2.01e-164 469
Msa0879770 MtrunA17_Chr7g0223741 78.571 266 57 0 1 266 1 266 4.42e-158 452
Msa0879770 MtrunA17_Chr7g0223751 78.947 266 56 0 1 266 1 266 1.08e-156 450
Msa0879770 MtrunA17_Chr7g0223031 79.845 258 52 0 1 258 1 258 1.53e-155 446
Msa0879770 MtrunA17_Chr7g0223631 85.938 256 22 2 1 256 1 242 3.37e-155 445
Msa0879770 MtrunA17_Chr7g0223731 77.068 266 61 0 1 266 1 266 1.81e-151 436
Msa0879770 MtrunA17_Chr7g0223781 76.316 266 63 0 1 266 1 266 2.29e-150 433
Msa0879770 MtrunA17_Chr2g0293601 74.806 258 65 0 1 258 1 258 4.86e-148 422
Msa0879770 MtrunA17_Chr2g0293561 72.556 266 73 0 1 266 1 266 2.32e-147 417
Msa0879770 MtrunA17_Chr2g0293581 73.783 267 69 1 1 266 1 267 8.48e-147 424
Msa0879770 MtrunA17_Chr7g0223801 74.812 266 66 1 1 266 1 265 1.86e-146 423
Msa0879770 MtrunA17_Chr2g0298851 73.308 266 71 0 1 266 1 266 2.70e-146 423
Msa0879770 MtrunA17_Chr7g0223851 75.969 258 62 0 1 258 10 267 3.38e-146 423
Msa0879770 MtrunA17_Chr7g0248131 79.297 256 51 2 1 254 1 256 2.13e-145 421
Msa0879770 MtrunA17_Chr7g0221661 72.932 266 72 0 1 266 1 266 3.82e-145 420
Msa0879770 MtrunA17_Chr7g0245521 72.692 260 70 1 1 260 1 259 6.00e-145 407
Msa0879770 MtrunA17_Chr5g0427901 71.119 277 69 1 1 266 1 277 3.39e-144 418
Msa0879770 MtrunA17_Chr7g0233311 72.556 266 73 0 1 266 1 266 2.50e-143 415
Msa0879770 MtrunA17_Chr7g0228281 72.180 266 74 0 1 266 62 327 3.74e-143 416
Msa0879770 MtrunA17_Chr7g0225671 73.764 263 67 1 4 266 13 273 9.90e-143 414
Msa0879770 MtrunA17_Chr7g0233301 72.659 267 71 2 1 266 1 266 1.38e-141 410
Msa0879770 MtrunA17_Chr7g0262821 73.684 266 68 1 1 266 1 264 5.01e-141 410
Msa0879770 MtrunA17_Chr7g0223821 73.308 266 71 0 1 266 1 266 7.23e-141 412
Msa0879770 MtrunA17_Chr4g0040931 71.053 266 77 0 1 266 1 266 7.93e-141 409
Msa0879770 MtrunA17_Chr2g0296391 71.429 266 76 0 1 266 1 266 1.03e-140 406
Msa0879770 MtrunA17_Chr4g0073741 73.684 266 67 2 1 266 1 263 5.38e-140 408
Msa0879770 MtrunA17_Chr7g0223181 73.684 266 68 1 1 266 1 264 5.59e-140 408
Msa0879770 MtrunA17_Chr7g0223721 74.016 254 66 0 1 254 1 254 6.67e-140 407
Msa0879770 MtrunA17_Chr7g0248151 76.692 266 62 0 1 266 1 266 1.28e-139 406
Msa0879770 MtrunA17_Chr1g0151991 69.663 267 81 0 1 267 1 267 1.49e-139 394
Msa0879770 MtrunA17_Chr4g0031321 72.556 266 71 1 1 266 1 264 6.67e-139 405
Msa0879770 MtrunA17_Chr7g0223291 72.932 266 70 1 1 266 1 264 1.97e-138 404
Msa0879770 MtrunA17_Chr2g0298861 71.004 269 67 1 1 258 1 269 2.34e-138 403
Msa0879770 MtrunA17_Chr4g0031301 71.805 266 73 1 1 266 1 264 4.08e-138 403
Msa0879770 MtrunA17_Chr7g0215261 68.421 266 66 1 1 266 1 248 2.28e-130 381
Msa0879770 MtrunA17_Chr2g0287631 70.677 266 78 0 1 266 1 266 3.10e-130 382
Msa0879770 MtrunA17_Chr6g0462601 69.549 266 79 1 1 266 1 264 1.76e-128 378
Msa0879770 MtrunA17_Chr7g0217971 67.829 258 59 1 1 258 1 234 2.53e-126 371
Msa0879770 MtrunA17_Chr6g0462681 70.543 258 74 1 1 258 1 256 1.36e-125 372
Msa0879770 MtrunA17_Chr4g0012541 67.442 258 75 1 1 258 1 249 2.84e-122 361
Msa0879770 MtrunA17_Chr6g0462771 69.922 256 75 1 8 263 8 261 6.10e-122 362
Msa0879770 MtrunA17_Chr6g0462711 67.568 259 83 1 8 266 9 266 2.70e-120 358
Msa0879770 MtrunA17_Chr2g0299921 69.962 263 75 2 4 266 1024 1282 1.49e-119 375
Msa0879770 MtrunA17_Chr2g0299921 67.045 264 82 3 4 266 1408 1667 4.62e-112 354
Msa0879770 MtrunA17_Chr2g0331381 65.759 257 62 2 10 266 7 237 5.43e-119 348
Msa0879770 MtrunA17_Chr7g0223831 64.662 266 66 1 1 266 1 238 1.18e-118 352
Msa0879770 MtrunA17_Chr7g0223671 82.143 196 33 1 74 267 8 203 2.24e-118 337
Msa0879770 MtrunA17_Chr6g0462641 66.540 263 86 1 1 263 1 261 1.73e-117 351
Msa0879770 MtrunA17_Chr2g0284681 65.217 253 86 1 9 261 8 258 8.93e-117 347
Msa0879770 MtrunA17_Chr2g0299851 63.910 266 92 2 1 266 1030 1291 4.02e-113 354
Msa0879770 MtrunA17_Chr2g0299821 60.448 268 102 2 1 266 1 266 1.55e-111 330
Msa0879770 MtrunA17_Chr2g0299791 65.038 266 89 2 1 266 1034 1295 6.22e-111 348
Msa0879770 MtrunA17_Chr2g0299881 64.684 269 87 4 2 266 1031 1295 1.11e-109 345
Msa0879770 MtrunA17_Chr2g0299881 58.209 67 28 0 184 250 1409 1475 6.88e-19 86.3
Msa0879770 MtrunA17_Chr2g0293271 71.154 208 60 0 21 228 43 250 3.86e-109 321
Msa0879770 MtrunA17_Chr8g0390821 56.013 316 71 7 1 263 1 301 3.26e-107 324
Msa0879770 MtrunA17_Chr7g0223541 77.202 193 44 0 74 266 31 223 1.37e-106 320
Msa0879770 MtrunA17_Chr8g0388761 63.415 246 83 4 7 251 36 275 1.19e-102 313
Msa0879770 MtrunA17_Chr8g0388671 63.821 246 82 4 7 251 36 275 3.65e-102 311
Msa0879770 MtrunA17_Chr7g0223681 88.750 160 18 0 91 250 2 161 3.78e-98 297
Msa0879770 MtrunA17_Chr1g0188601 69.714 175 53 0 92 266 1 175 1.24e-89 264
Msa0879770 MtrunA17_Chr6g0462611 68.108 185 59 0 74 258 22 206 2.31e-83 261
Msa0879770 MtrunA17_Chr7g0223771 74.026 154 40 0 93 246 1 154 3.99e-83 246
Msa0879770 MtrunA17_Chr6g0462861 53.488 258 107 4 1 258 1 245 9.77e-83 260
Msa0879770 MtrunA17_Chr1g0166551 51.373 255 52 2 9 263 5 187 1.76e-79 248
Msa0879770 MtrunA17_Chr4g0049501 51.190 252 110 5 10 260 54 293 4.77e-79 251
Msa0879770 MtrunA17_Chr2g0279901 53.252 246 102 5 10 254 57 290 5.46e-79 251
Msa0879770 MtrunA17_Chr2g0277021 50.813 246 110 5 10 254 72 307 2.67e-70 229
Msa0879770 MtrunA17_Chr7g0223861 74.046 131 34 0 78 208 4 134 3.91e-67 204
Msa0879770 MtrunA17_Chr4g0046881 70.588 136 40 0 131 266 10 145 2.23e-65 201
Msa0879770 MtrunA17_Chr6g0462791 65.333 150 51 1 109 258 2 150 3.49e-64 198
Msa0879770 MtrunA17_Chr6g0481391 64.754 122 40 1 38 159 13 131 4.15e-51 163
Msa0879770 MtrunA17_Chr6g0462701 51.786 168 57 1 91 258 13 156 2.13e-50 163
Msa0879770 MtrunA17_Chr4g0004331 38.095 252 149 3 10 258 4 251 8.51e-49 172
Msa0879770 MtrunA17_Chr6g0462751 51.497 167 62 2 67 231 12 161 1.45e-48 163
Msa0879770 MtrunA17_Chr2g0331901 36.000 250 157 2 10 258 4 251 8.09e-47 167
Msa0879770 MtrunA17_Chr7g0223691 89.041 73 8 0 1 73 1 73 1.49e-44 145
Msa0879770 MtrunA17_Chr6g0462631 48.538 171 58 3 91 258 13 156 1.17e-43 150
Msa0879770 MtrunA17_Chr5g0444001 34.553 246 158 2 10 254 4 247 7.70e-41 147
Msa0879770 MtrunA17_Chr3g0098761 32.400 250 166 2 10 258 4 251 4.22e-39 144
Msa0879770 MtrunA17_Chr1g0188591 75.342 73 18 0 1 73 1 73 3.11e-33 116
Msa0879770 MtrunA17_Chr5g0394231 34.973 183 69 3 74 256 5 137 4.01e-33 119
Msa0879770 MtrunA17_Chr6g0481381 72.973 74 20 0 176 249 1 74 1.01e-32 118
Msa0879770 MtrunA17_Chr6g0462621 76.712 73 15 1 1 73 1 71 3.23e-32 113
Msa0879770 MtrunA17_Chr5g0394391 31.801 261 165 6 8 259 28 284 1.31e-30 119
Msa0879770 MtrunA17_Chr7g0223791 70.732 82 16 3 56 137 18 91 2.98e-30 111
Msa0879770 MtrunA17_Chr3g0120101 27.099 262 173 5 10 256 27 285 3.58e-27 110
Msa0879770 MtrunA17_Chr4g0064621 30.712 267 155 10 8 252 139 397 4.89e-21 92.4
Msa0879770 MtrunA17_Chr4g0060241 28.195 266 164 9 8 259 19 271 1.12e-18 85.5
Msa0879770 MtrunA17_Chr5g0442161 29.936 157 103 4 5 157 24 177 6.41e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0879770 AT3G12580.1 74.812 266 65 1 1 266 1 264 3.03e-142 414
Msa0879770 AT5G02500.2 73.764 263 67 1 1 263 1 261 9.36e-142 408
Msa0879770 AT1G56410.1 74.144 263 66 1 1 263 1 261 4.04e-140 407
Msa0879770 AT5G02490.1 74.144 263 66 1 1 263 1 261 5.78e-140 408
Msa0879770 AT5G02500.1 72.932 266 70 1 1 266 1 264 6.08e-140 408
Msa0879770 AT3G09440.1 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0879770 AT3G09440.4 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0879770 AT3G09440.2 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0879770 AT3G09440.3 72.932 266 70 1 1 266 1 264 9.73e-139 405
Msa0879770 AT1G16030.1 71.053 266 74 2 1 266 1 263 2.78e-133 391
Msa0879770 AT1G09080.2 65.714 245 78 3 7 251 40 278 4.30e-109 329
Msa0879770 AT1G09080.1 65.714 245 78 3 7 251 50 288 8.62e-109 329
Msa0879770 AT5G42020.2 62.205 254 89 4 7 259 35 282 1.84e-103 313
Msa0879770 AT5G42020.1 62.205 254 89 4 7 259 35 282 3.30e-103 314
Msa0879770 AT5G28540.1 62.205 254 89 4 7 259 35 282 5.49e-103 314
Msa0879770 AT5G42020.3 62.205 254 89 4 7 259 40 287 7.11e-103 313
Msa0879770 AT5G09590.1 52.846 246 104 4 10 254 60 294 2.22e-78 250
Msa0879770 AT4G37910.1 51.220 246 108 4 10 254 55 289 1.57e-77 248
Msa0879770 AT4G37910.2 51.220 246 108 4 10 254 55 289 1.57e-77 248
Msa0879770 AT4G24280.1 50.407 246 111 5 10 254 81 316 6.76e-70 228
Msa0879770 AT5G49910.1 49.593 246 113 5 10 254 81 316 4.76e-69 226
Msa0879770 AT1G79930.2 38.000 250 152 2 10 258 4 251 5.78e-51 178
Msa0879770 AT1G79930.1 38.000 250 152 2 10 258 4 251 9.39e-51 178
Msa0879770 AT1G79920.1 37.698 252 150 3 10 258 4 251 1.67e-49 174
Msa0879770 AT1G79920.3 37.698 252 150 3 10 258 4 251 1.83e-49 174
Msa0879770 AT1G79920.2 37.698 252 150 3 10 258 4 251 1.83e-49 174
Msa0879770 AT1G79920.4 37.698 252 150 3 10 258 4 251 1.83e-49 174
Msa0879770 AT1G11660.4 36.800 250 152 3 10 256 4 250 1.81e-46 166
Msa0879770 AT1G11660.3 36.800 250 152 3 10 256 4 250 1.81e-46 166
Msa0879770 AT1G11660.1 36.800 250 152 3 10 256 4 250 1.81e-46 166
Msa0879770 AT1G11660.2 39.437 213 125 2 47 256 2 213 1.74e-40 149
Msa0879770 AT2G32120.1 32.143 252 156 7 8 249 29 275 2.73e-28 113
Msa0879770 AT2G32120.2 32.143 252 156 7 8 249 29 275 2.73e-28 113
Msa0879770 AT4G16660.2 26.236 263 175 5 6 253 47 305 8.93e-27 109
Msa0879770 AT4G16660.1 26.236 263 175 5 6 253 23 281 1.16e-26 109

Find 200 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAACCTCCTCAAGGCTTT+TGG 0.126998 6_1:+22606119 None:intergenic
TTTGAATTGGCTTCAAAATT+TGG 0.143460 6_1:+22607184 None:intergenic
TCTACTGTTGTGGCCCTTTA+AGG 0.152881 6_1:-22606638 Msa0879770:CDS
TTGATATATTATGCTATATT+TGG 0.161182 6_1:-22604946 Msa0879770:three_prime_UTR
TGTCACTTGGTAAGTCAATT+AGG 0.195343 6_1:-22605695 Msa0879770:three_prime_UTR
TGCATCGTGACGCTGATAAT+TGG 0.202249 6_1:-22612456 Msa0879770:five_prime_UTR
GGATGCTCACCTGCAGTTTA+TGG 0.220649 6_1:+22610455 None:intergenic
TCCTTGTTGGTGGTTCTTCT+AGG 0.229614 6_1:-22605884 Msa0879770:three_prime_UTR
CTTCTGAGTGTACCCTAAAA+TGG 0.240296 6_1:+22613863 None:intergenic
TGGCCCTTTAAGGTCATTTC+CGG 0.243786 6_1:-22606628 Msa0879770:CDS
TGTAGTGTGAAGTAGTATTT+TGG 0.244820 6_1:+22607221 None:intergenic
GCAGATGCAAAGAGGTTAAT+TGG 0.250254 6_1:-22606694 Msa0879770:intron
CTGTCTTGTTGATGCTAAAA+TGG 0.256497 6_1:-22605931 Msa0879770:three_prime_UTR
TGCTTACGGTGCAGCTATTC+AGG 0.270565 6_1:-22605781 Msa0879770:three_prime_UTR
AACCCAACCAACACTGTCTT+TGG 0.276208 6_1:-22606927 Msa0879770:intron
GTCACTTGGTAAGTCAATTA+GGG 0.283941 6_1:-22605694 Msa0879770:three_prime_UTR
CGTTAAGAGTGTTCCAATCT+TGG 0.295237 6_1:-22605739 Msa0879770:three_prime_UTR
CCTTGAAATTCTCAGCTTCC+TGG 0.297903 6_1:+22605340 None:intergenic
TTTGTGCAGCTTCTGACATT+TGG 0.300358 6_1:-22611538 Msa0879770:five_prime_UTR
GTAATTACTGCATTCTTAAC+AGG 0.301333 6_1:+22606481 None:intergenic
TGCAATAGCTGCTTCACTTT+AGG 0.304620 6_1:+22605858 None:intergenic
GCATCTACATGTAGTTATTC+TGG 0.316117 6_1:-22612486 Msa0879770:five_prime_UTR
TATGGAAAACCTGTACAATA+TGG 0.332198 6_1:+22611438 None:intergenic
CTTACTCGTGTGTTGGAGTA+TGG 0.335848 6_1:-22607076 Msa0879770:CDS
AGAAGATATCTTTGTGTTTG+TGG 0.337493 6_1:-22605139 Msa0879770:three_prime_UTR
CAAGTTTGAGCAATTGAATA+TGG 0.349032 6_1:-22605988 Msa0879770:three_prime_UTR
AGCACCGGAAATGACCTTAA+AGG 0.349583 6_1:+22606624 None:intergenic
TTCATTCACTTGAAGCACTA+TGG 0.351239 6_1:-22607144 Msa0879770:exon
GCATCGTGACGCTGATAATT+GGG 0.356750 6_1:-22612455 Msa0879770:five_prime_UTR
CAGCATCACCAATCAGCCTT+TGG 0.360159 6_1:+22606970 None:intergenic
GTCGATGATGTTGTCCTTGT+TGG 0.366819 6_1:-22605897 Msa0879770:three_prime_UTR
GTAGGTTGCAAATAATAATA+AGG 0.369217 6_1:+22611473 None:intergenic
ATAAACAAACCTGTACAATA+TGG 0.370301 6_1:+22611420 None:intergenic
TTGATCTTCTCTTTGTCTAC+AGG 0.380282 6_1:+22605207 None:intergenic
CTTCCTGTGAGAGGGCAAAA+AGG 0.380533 6_1:-22606094 Msa0879770:three_prime_UTR
AGTTGAAGCAAGAAATGCTT+TGG 0.381737 6_1:-22605292 Msa0879770:three_prime_UTR
CCGTAAGCAACAGCCTCATC+AGG 0.392319 6_1:+22605795 None:intergenic
CATTGAGATATCAACAGAAT+TGG 0.394482 6_1:+22611089 None:intergenic
TGTCTTAATTAAAGTTTATG+AGG 0.397181 6_1:-22605580 Msa0879770:three_prime_UTR
AAGAACAAAGAGGATATTAG+TGG 0.402789 6_1:-22606146 Msa0879770:CDS
GAGGAAGTACAGAAGAATAT+TGG 0.406656 6_1:-22611067 Msa0879770:intron
AGATTGAACTTTGTAGCATC+TGG 0.407129 6_1:+22612430 None:intergenic
AGCATCACCAATCAGCCTTT+GGG 0.410141 6_1:+22606971 None:intergenic
TACCAAAGACAGTGTTGGTT+GGG 0.410143 6_1:+22606925 None:intergenic
ACTAATTCCCAAAGGCTGAT+TGG 0.414254 6_1:-22606978 Msa0879770:CDS
TTTGTAGTGAAGATTTGAAT+TGG 0.414430 6_1:+22607171 None:intergenic
ATTCAAATCTTCACTACAAA+CGG 0.416588 6_1:-22607168 Msa0879770:five_prime_UTR
GCTTCTGACATTTGGAGTGT+TGG 0.416848 6_1:-22611530 Msa0879770:five_prime_UTR
CCTCGAGCATATATACCATT+TGG 0.417233 6_1:-22612367 Msa0879770:five_prime_UTR
AGCGGGATGCCGTGATGGTT+CGG 0.419541 6_1:+22614432 None:intergenic
TAAAGTGAAGCAGCTATTGC+AGG 0.420438 6_1:-22605856 Msa0879770:three_prime_UTR
AGCCTGCAGTCGTGGTCTCC+AGG 0.421414 6_1:-22612555 Msa0879770:five_prime_UTR
GGTTAGGTTCAGAGTTGGTT+AGG 0.422618 6_1:-22611186 Msa0879770:five_prime_UTR
CATATTCAATTGCTCAAACT+TGG 0.426433 6_1:+22605989 None:intergenic
TTTGATGTCAAGGCCACTGC+TGG 0.427311 6_1:-22606238 Msa0879770:CDS
TTTCAGGTTATAGAAATGTC+TGG 0.429962 6_1:-22611563 Msa0879770:intron
AAAGATGCAGGTGAAATTGC+TGG 0.430331 6_1:-22606418 Msa0879770:CDS
GCACCGGAAATGACCTTAAA+GGG 0.431309 6_1:+22606625 None:intergenic
ACACAAAGATATCTTCTTGC+TGG 0.431467 6_1:+22605145 None:intergenic
AACTACATGTAGATGCCTTT+AGG 0.433038 6_1:+22612493 None:intergenic
ACATCTCGCAAAACCAAGAT+TGG 0.436932 6_1:+22605726 None:intergenic
CTCGTGCATAACGTTGGATC+TGG 0.439679 6_1:-22604995 Msa0879770:three_prime_UTR
CACTATGGCAAACAAATATG+AGG 0.441399 6_1:-22607129 Msa0879770:exon
CACCAACCACAAGAGGTTGC+TGG 0.445446 6_1:+22610482 None:intergenic
GTTGCTGGTTTGCTCTCAAA+AGG 0.450378 6_1:+22610497 None:intergenic
TGGGACGTTTGTAGGTGGTT+AGG 0.451072 6_1:-22611202 Msa0879770:intron
ACAGGAATGGAAGTGTTCCT+TGG 0.453543 6_1:+22605648 None:intergenic
CAACGTTTCCATGGTCTATG+AGG 0.456333 6_1:-22610071 Msa0879770:intron
TCCCTGGAGACCACGACTGC+AGG 0.458253 6_1:+22612553 None:intergenic
GCATATATACCATTTGGACT+TGG 0.461777 6_1:-22612361 Msa0879770:five_prime_UTR
TTTATCTTTGACCTTGGCGG+TGG 0.462714 6_1:-22606301 Msa0879770:CDS
CTCTGATGAGAAAAGTGATT+CGG 0.468846 6_1:-22605055 Msa0879770:three_prime_UTR
TTGTAGTTCACAAGAATTGT+CGG 0.473999 6_1:+22606592 None:intergenic
TTTCAGGGAGAAAGAAAGGT+GGG 0.476553 6_1:-22610104 Msa0879770:intron
GGATGCCGTGATGGTTCGGT+GGG 0.481605 6_1:+22614436 None:intergenic
ACACTTCCATTCCTGTCAAA+AGG 0.483025 6_1:-22605641 Msa0879770:three_prime_UTR
ACTGCAGCTGCTCTAGCATA+TGG 0.483457 6_1:-22606364 Msa0879770:CDS
TAAAGCATACTTTGAAAGGA+TGG 0.483629 6_1:+22605484 None:intergenic
CCTGATGAGGCTGTTGCTTA+CGG 0.484166 6_1:-22605795 Msa0879770:three_prime_UTR
ATTGTAAAGCATACTTTGAA+AGG 0.484358 6_1:+22605480 None:intergenic
GACCTAGATGCTATATATCA+AGG 0.488303 6_1:-22606041 Msa0879770:three_prime_UTR
CTTTAATTAAGACAGTGCTT+TGG 0.491685 6_1:+22605589 None:intergenic
GAAATTATTCACAATGATCA+AGG 0.492859 6_1:-22607032 Msa0879770:CDS
GCTAGTGAGAACAACTTGCT+TGG 0.498631 6_1:-22605543 Msa0879770:three_prime_UTR
CATGTTACTTGACAGAGATA+TGG 0.502653 6_1:-22611137 Msa0879770:five_prime_UTR
CCAGGAAGCTGAGAATTTCA+AGG 0.503257 6_1:-22605340 Msa0879770:three_prime_UTR
GAAAGTAGAACACTGTGAAT+TGG 0.505642 6_1:-22610578 Msa0879770:five_prime_UTR
AAATATGAGGGAGTTGCGAT+TGG 0.506277 6_1:-22607116 Msa0879770:CDS
GAGCATCTTTGAATCTGCTA+TGG 0.507207 6_1:-22605097 Msa0879770:three_prime_UTR
GGAGAATTTATGCTACCTAA+AGG 0.508703 6_1:-22612508 Msa0879770:five_prime_UTR
CATATATACCATTTGGACTT+GGG 0.510958 6_1:-22612360 Msa0879770:five_prime_UTR
TGTGAATCATTAAAATAAGC+AGG 0.511579 6_1:+22606454 None:intergenic
ATGCCGTGATGGTTCGGTGG+GGG 0.513873 6_1:+22614438 None:intergenic
ATGAGAAGGGAAGATTATCA+AGG 0.517115 6_1:-22605383 Msa0879770:three_prime_UTR
TAGGTGGTTAGGTTCAGAGT+TGG 0.520387 6_1:-22611191 Msa0879770:five_prime_UTR
TGTCGACTCCCAAGTCCAAA+TGG 0.522876 6_1:+22612352 None:intergenic
TCAGCGTCACGATGCAATGA+TGG 0.523020 6_1:+22612463 None:intergenic
GGCACGACTTACTCGTGTGT+TGG 0.523542 6_1:-22607083 Msa0879770:CDS
AATCTAGAGAGATTTGCTAA+TGG 0.523657 6_1:-22612412 Msa0879770:five_prime_UTR
ATCATTAAAATAAGCAGGTA+CGG 0.526365 6_1:+22606459 None:intergenic
AAATAAGGTCTTTGATGTCA+AGG 0.528245 6_1:-22606248 Msa0879770:CDS
GTTGCGATTGGAATTGACCT+TGG 0.528850 6_1:-22607104 Msa0879770:CDS
GAAAACACATTCACAGCAGT+TGG 0.531319 6_1:+22610519 None:intergenic
CATCTCAGCTAAAACTTCCC+TGG 0.532705 6_1:+22612537 None:intergenic
TTATTATTTGCAACCTACGC+TGG 0.534168 6_1:-22611468 Msa0879770:five_prime_UTR
TGTCGGTTTGTCATCAGCAC+CGG 0.535167 6_1:+22606609 None:intergenic
ACAAATTGACAGAATGATCC+AGG 0.535296 6_1:-22605358 Msa0879770:three_prime_UTR
GATGATGTTGTCCTTGTTGG+TGG 0.537032 6_1:-22605894 Msa0879770:three_prime_UTR
AAAGCATTTCAACGTTTCCA+TGG 0.539490 6_1:-22610080 Msa0879770:five_prime_UTR
GCCTGCAGTCGTGGTCTCCA+GGG 0.541153 6_1:-22612554 Msa0879770:five_prime_UTR
GAGGATGGAAACATGTATCA+AGG 0.542420 6_1:-22613825 Msa0879770:five_prime_UTR
ACGGCAGCGGGATGCCGTGA+TGG 0.543194 6_1:+22614427 None:intergenic
TGCTTCCTCGTGCATAACGT+TGG 0.544280 6_1:-22605001 Msa0879770:three_prime_UTR
GGTGAATAAGAGAGGTGTGA+AGG 0.549620 6_1:-22613801 Msa0879770:intron
GTCTTAATTAAAGTTTATGA+GGG 0.551072 6_1:-22605579 Msa0879770:three_prime_UTR
GGCAATACAAATACGATTAG+CGG 0.553899 6_1:+22610540 None:intergenic
TATGCTAGAGCAGCTGCAGT+TGG 0.556128 6_1:+22606367 None:intergenic
AACGACGAAAACAATGGATG+TGG 0.559334 6_1:+22614469 None:intergenic
AGATATCAACAGAATTGGAC+GGG 0.563398 6_1:+22611094 None:intergenic
TTATGAATGTGGTGATTCCA+AGG 0.564013 6_1:-22605665 Msa0879770:three_prime_UTR
AGCAAACCAGCAACCTCTTG+TGG 0.566154 6_1:-22610488 Msa0879770:five_prime_UTR
TACCTTGATATATAGCATCT+AGG 0.567285 6_1:+22606039 None:intergenic
ATCAAGGAGGTGAATAAGAG+AGG 0.567729 6_1:-22613809 Msa0879770:five_prime_UTR
TGCTTTACAATAGATGCTGA+TGG 0.571047 6_1:-22605468 Msa0879770:three_prime_UTR
ATGCAAAGAGGTTAATTGGA+AGG 0.571352 6_1:-22606690 Msa0879770:CDS
TGAGAAGGGAAGATTATCAA+GGG 0.572473 6_1:-22605382 Msa0879770:three_prime_UTR
GGGATGCCGTGATGGTTCGG+TGG 0.572653 6_1:+22614435 None:intergenic
CAATCTCTCGCATCTGTGAG+AGG 0.572867 6_1:+22606524 None:intergenic
AACAGAATTGGACGGGAGTG+AGG 0.573835 6_1:+22611101 None:intergenic
AATTACAATAACTAATGAGA+AGG 0.576503 6_1:-22605397 Msa0879770:three_prime_UTR
TAAATTACCAAAGACAGTGT+TGG 0.578436 6_1:+22606920 None:intergenic
TGAATTGGTTCATGTGATTG+TGG 0.579683 6_1:-22610563 Msa0879770:five_prime_UTR
TTACCAAAGACAGTGTTGGT+TGG 0.584440 6_1:+22606924 None:intergenic
TCCTCCTCTAAGACAGAGAA+GGG 0.584445 6_1:-22613890 Msa0879770:intron
TAGGGGAGATATTATGAATG+TGG 0.588778 6_1:-22605676 Msa0879770:three_prime_UTR
CATATCTCTGTCAAGTAACA+TGG 0.589827 6_1:+22611138 None:intergenic
TGGCTATCACCAACCACAAG+AGG 0.590154 6_1:+22610475 None:intergenic
CGAAGAGCGACTAAAGATGC+AGG 0.590788 6_1:-22606430 Msa0879770:CDS
TCTTGTGAACTACAAGGGTG+AGG 0.592468 6_1:-22606584 Msa0879770:CDS
GGAAGTTCTCAACCTCCTCA+AGG 0.593442 6_1:+22606112 None:intergenic
TTCCTCCTCTAAGACAGAGA+AGG 0.593610 6_1:-22613891 Msa0879770:intron
TTGCTTTCACTAATTCCCAA+AGG 0.594534 6_1:-22606986 Msa0879770:CDS
TATAGCATCTAGGTCAATTG+TGG 0.597011 6_1:+22606049 None:intergenic
TAGGTGAGTGTCTCCAGCAG+TGG 0.598292 6_1:+22606225 None:intergenic
AACCAGCAACCTCTTGTGGT+TGG 0.598413 6_1:-22610484 Msa0879770:five_prime_UTR
ATTACAATAACTAATGAGAA+GGG 0.598716 6_1:-22605396 Msa0879770:three_prime_UTR
GGATGGCCTCGAGGTGCGAG+AGG 0.599577 6_1:+22605501 None:intergenic
GACAATTCTTGTGAACTACA+AGG 0.599895 6_1:-22606590 Msa0879770:CDS
GTTGAGAACTTCCTGTGAGA+GGG 0.601258 6_1:-22606102 Msa0879770:three_prime_UTR
GGTTGAGAACTTCCTGTGAG+AGG 0.604182 6_1:-22606103 Msa0879770:three_prime_UTR
GAGATATCAACAGAATTGGA+CGG 0.609093 6_1:+22611093 None:intergenic
TATCAAAGTCTTCACCGCCT+AGG 0.609377 6_1:+22606206 None:intergenic
TGAAGACTTTGATAACAGAA+TGG 0.610392 6_1:-22606197 Msa0879770:CDS
AAGAAGAACGACGAAAACAA+TGG 0.612808 6_1:+22614463 None:intergenic
CACTTTGTGAAGGAGTTCAG+AGG 0.613579 6_1:-22606169 Msa0879770:CDS
TCACTTCCTCTCGCACCTCG+AGG 0.617001 6_1:-22605507 Msa0879770:three_prime_UTR
GATGTTACACCATTGTCACT+TGG 0.617615 6_1:-22605708 Msa0879770:three_prime_UTR
CATCAAAAGTTCCACCGCCA+AGG 0.617660 6_1:+22606290 None:intergenic
GACACTTTGATACGACATTG+AGG 0.619150 6_1:-22606072 Msa0879770:three_prime_UTR
CATCGTGACGCTGATAATTG+GGG 0.619314 6_1:-22612454 Msa0879770:five_prime_UTR
CAGTAGATCATTCTGAACAA+TGG 0.620189 6_1:+22606654 None:intergenic
GATGCCGTGATGGTTCGGTG+GGG 0.621998 6_1:+22614437 None:intergenic
CGTAAGCAACAGCCTCATCA+GGG 0.624820 6_1:+22605796 None:intergenic
GATCAACTCAGCAATGACCA+AGG 0.625695 6_1:-22605190 Msa0879770:three_prime_UTR
TTAGTGAAAGCAACACAAGA+AGG 0.625764 6_1:+22606996 None:intergenic
TGGTGATAGCCATAAACTGC+AGG 0.630276 6_1:-22610464 Msa0879770:intron
TTCAGAATGATCTACTGTTG+TGG 0.632222 6_1:-22606648 Msa0879770:CDS
AGAACAAAGAGGATATTAGT+GGG 0.633089 6_1:-22606145 Msa0879770:CDS
TAGGTTCAGAGTTGGTTAGG+CGG 0.637332 6_1:-22611183 Msa0879770:five_prime_UTR
CAAGAGCATTAACCCTGATG+AGG 0.639574 6_1:-22605808 Msa0879770:three_prime_UTR
ACGACGAAAACAATGGATGT+GGG 0.642044 6_1:+22614470 None:intergenic
ACTATGGCAAACAAATATGA+GGG 0.643119 6_1:-22607128 Msa0879770:CDS
ACTGCTGGAGACACTCACCT+AGG 0.643459 6_1:-22606223 Msa0879770:CDS
AATGGTGAATCACTTTGTGA+AGG 0.643840 6_1:-22606179 Msa0879770:CDS
TCACTTGGTAAGTCAATTAG+GGG 0.645508 6_1:-22605693 Msa0879770:three_prime_UTR
TCCTAGAAGAACCACCAACA+AGG 0.646014 6_1:+22605883 None:intergenic
AACTTGTACCTCATAGACCA+TGG 0.649888 6_1:+22610063 None:intergenic
ATTGACTTACCAAGTGACAA+TGG 0.650268 6_1:+22605699 None:intergenic
ATCAACTCAGCAATGACCAA+GGG 0.650698 6_1:-22605189 Msa0879770:three_prime_UTR
GGTTGCAAATAATAATAAGG+AGG 0.652162 6_1:+22611476 None:intergenic
CACACGAGTAAGTCGTGCCA+AGG 0.653849 6_1:+22607087 None:intergenic
CCAAATGGTATATATGCTCG+AGG 0.654994 6_1:+22612367 None:intergenic
CTTGGGAGTCGACATTGTCA+AGG 0.655503 6_1:-22612343 Msa0879770:five_prime_UTR
AGTTCAGAGGAAGAACAAAG+AGG 0.657636 6_1:-22606156 Msa0879770:CDS
GCTATGGACAAGATCAACAA+AGG 0.659225 6_1:-22605081 Msa0879770:three_prime_UTR
GCATGAGCAGAACGATCGTG+TGG 0.659349 6_1:-22607054 Msa0879770:CDS
ACAATTCTTGTGAACTACAA+GGG 0.663306 6_1:-22606589 Msa0879770:CDS
GTGGGAACCCAAAAGCCTTG+AGG 0.668086 6_1:-22606127 Msa0879770:exon
GGAACCCAAAAGCCTTGAGG+AGG 0.669169 6_1:-22606124 Msa0879770:exon
CAGATCCAACGTTATGCACG+AGG 0.671670 6_1:+22604996 None:intergenic
GAGAAGGGAAGATTATCAAG+GGG 0.682752 6_1:-22605381 Msa0879770:three_prime_UTR
TTGCTGGTCTCAATGTAATG+CGG 0.692548 6_1:-22606402 Msa0879770:CDS
ATATGGAAAAGAGCCAGCGT+AGG 0.696903 6_1:+22611455 None:intergenic
ATTCTGTTGATATCTCAATG+AGG 0.706448 6_1:-22611086 Msa0879770:five_prime_UTR
ACTTTGAAAGGATGGCCTCG+AGG 0.710427 6_1:+22605492 None:intergenic
ACAGATGCGAGAGATTGCAG+AGG 0.728184 6_1:-22606518 Msa0879770:CDS
TCTGCAGTGGAAGAAACCAG+TGG 0.733951 6_1:-22605432 Msa0879770:three_prime_UTR
GCTGGAGACACTCACCTAGG+CGG 0.737514 6_1:-22606220 Msa0879770:CDS
GATGGAAACATGTATCAAGG+AGG 0.751456 6_1:-22613822 Msa0879770:five_prime_UTR
CTGCCGTGAGAACAAAACAA+CGG 0.757059 6_1:-22614411 Msa0879770:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAAAAAAAATATTTAAC+TGG + chr6_1:22605206-22605225 None:intergenic 10.0%
!!! TTTAAGAAACAATTTTTTTT+TGG - chr6_1:22607426-22607445 Msa0879770:intron 10.0%
!!! TCTGTTATAATTTTAAATAT+TGG - chr6_1:22607638-22607657 Msa0879770:intron 10.0%
!!! ATAATTTTTTTTTCTTTTTC+TGG - chr6_1:22609596-22609615 Msa0879770:intron 10.0%
!! TAAAAATAATAATACATCTT+AGG - chr6_1:22609664-22609683 Msa0879770:intron 10.0%
!!! TGTTTTTATTATAGTTTTTT+TGG - chr6_1:22611575-22611594 Msa0879770:intron 10.0%
!! TATTCTTACAATTAAAAATA+AGG - chr6_1:22613128-22613147 Msa0879770:intron 10.0%
!! AAAAGAGAAATAAATTGAAA+AGG + chr6_1:22605645-22605664 None:intergenic 15.0%
!!! TACATTTTATTTAGCATTTT+AGG - chr6_1:22605819-22605838 Msa0879770:three_prime_UTR 15.0%
!! AAAAAAGTTGTCTAAATTAT+AGG - chr6_1:22605952-22605971 Msa0879770:three_prime_UTR 15.0%
!! TATTCAAGTCATATTATATA+CGG + chr6_1:22606212-22606231 None:intergenic 15.0%
!! TTAATTATACATGTAGTAAA+AGG + chr6_1:22606469-22606488 None:intergenic 15.0%
!!! AATTCAACTTTTAGATTTTT+AGG + chr6_1:22606684-22606703 None:intergenic 15.0%
!!! AATTCAACTTTTAGATTTTT+AGG + chr6_1:22606684-22606703 None:intergenic 15.0%
!! AAAATCTAAAAGTTGAATTT+AGG - chr6_1:22606762-22606781 Msa0879770:intron 15.0%
!!! TTTTTTAGGTCTAATTTTTT+TGG + chr6_1:22608453-22608472 None:intergenic 15.0%
!!! ATAAACTCTATCTATTTTTT+AGG + chr6_1:22608467-22608486 None:intergenic 15.0%
!!! AAAATAGATAGAGTTTATTT+TGG - chr6_1:22608469-22608488 Msa0879770:intron 15.0%
!!! AAATAGATAGAGTTTATTTT+GGG - chr6_1:22608470-22608489 Msa0879770:intron 15.0%
!!! TATTAGAAAATTTTAAGTGT+TGG + chr6_1:22609454-22609473 None:intergenic 15.0%
!!! AAAATTTTCTAATATAGTGT+AGG - chr6_1:22609460-22609479 Msa0879770:intron 15.0%
!!! GTCTAAATTTAAAATTTCTT+TGG + chr6_1:22610076-22610095 None:intergenic 15.0%
!!! TTTTAAAGTTGATTTTGAAA+AGG - chr6_1:22610379-22610398 Msa0879770:intron 15.0%
!!! TGGATTTATTAAGATTTTAA+AGG + chr6_1:22611722-22611741 None:intergenic 15.0%
!! TTGATATATTATGCTATATT+TGG - chr6_1:22614445-22614464 Msa0879770:five_prime_UTR 15.0%
!! GAATTTAAGAGAAAAACTTA+TGG + chr6_1:22605167-22605186 None:intergenic 20.0%
!!! TTTTCTCTTAAATTCGAATT+TGG - chr6_1:22605172-22605191 Msa0879770:three_prime_UTR 20.0%
!! ATGACTTGAATAATTATATG+TGG - chr6_1:22606220-22606239 Msa0879770:CDS 20.0%
!! TGACTTGAATAATTATATGT+GGG - chr6_1:22606221-22606240 Msa0879770:CDS 20.0%
!! ATAAGACAAAAAGTTATATG+TGG - chr6_1:22606612-22606631 Msa0879770:CDS 20.0%
!! TCTAAAAGTTGAATTATATG+TGG - chr6_1:22606689-22606708 Msa0879770:CDS 20.0%
!!! ATTTTATTGTCTATATTCTC+CGG - chr6_1:22607363-22607382 Msa0879770:intron 20.0%
!! GTACATATGTTGAAATATAT+AGG - chr6_1:22607399-22607418 Msa0879770:intron 20.0%
!!! TCATTGAATTTTATGTATCT+CGG - chr6_1:22607453-22607472 Msa0879770:intron 20.0%
!!! TTTTATTGTAGCTTCTTTTA+GGG + chr6_1:22607666-22607685 None:intergenic 20.0%
!!! ATTTTATTGTAGCTTCTTTT+AGG + chr6_1:22607667-22607686 None:intergenic 20.0%
!!! TGCTCTAAAAAAGTAATTTT+AGG - chr6_1:22607693-22607712 Msa0879770:intron 20.0%
!!! CAGTAAACATGATAAAATTT+TGG + chr6_1:22608552-22608571 None:intergenic 20.0%
!! AATTGTGTAACAAGTATAAT+TGG - chr6_1:22608688-22608707 Msa0879770:intron 20.0%
!! ATTGTGTAACAAGTATAATT+GGG - chr6_1:22608689-22608708 Msa0879770:intron 20.0%
!!! AAAAACAAGTTTTTTGCTAT+AGG + chr6_1:22609214-22609233 None:intergenic 20.0%
!!! TTGATTAGTTTTACTGATTA+CGG - chr6_1:22609255-22609274 Msa0879770:intron 20.0%
!!! TTCATAAACAAAGTATTAGA+GGG + chr6_1:22609402-22609421 None:intergenic 20.0%
!!! ATTCATAAACAAAGTATTAG+AGG + chr6_1:22609403-22609422 None:intergenic 20.0%
!!! AAACTATATAATTTTGGCAA+AGG + chr6_1:22609528-22609547 None:intergenic 20.0%
!!! GCATTCAAACTATATAATTT+TGG + chr6_1:22609534-22609553 None:intergenic 20.0%
!! AATAATAATACATCTTAGGT+CGG - chr6_1:22609668-22609687 Msa0879770:intron 20.0%
!! ACTTAACAGATAATTTCTTA+AGG - chr6_1:22609821-22609840 Msa0879770:intron 20.0%
!!! GAAGTATATTCTTTTTAAGT+CGG + chr6_1:22609858-22609877 None:intergenic 20.0%
!!! TTAAAAAGGGTTTTTTGATA+TGG - chr6_1:22609938-22609957 Msa0879770:intron 20.0%
!! TTAAAGACATTAGGAATATT+TGG + chr6_1:22610527-22610546 None:intergenic 20.0%
!! TGTAAAAACAAGGAATAAAT+TGG - chr6_1:22610800-22610819 Msa0879770:intron 20.0%
!! AGAATAAAGAATTGAAGATA+TGG - chr6_1:22610829-22610848 Msa0879770:intron 20.0%
!! TAGATTGTATCATATTATCT+TGG - chr6_1:22611233-22611252 Msa0879770:intron 20.0%
!! TATTGTGTATGAGTTTAATT+TGG - chr6_1:22611320-22611339 Msa0879770:intron 20.0%
!!! AATTGATGTATATGTCTTTT+TGG - chr6_1:22611599-22611618 Msa0879770:intron 20.0%
!!! TAAGATTTTAAAGGACTTTA+TGG + chr6_1:22611713-22611732 None:intergenic 20.0%
!!! AAGATTTTAAAAGACTTTGT+TGG + chr6_1:22611825-22611844 None:intergenic 20.0%
!! AACAATTAACATACTAACAT+CGG + chr6_1:22611936-22611955 None:intergenic 20.0%
!! AACTAAAAATTAAACAATGC+TGG + chr6_1:22612511-22612530 None:intergenic 20.0%
!! GTTGATATGAAAATGAAAAT+AGG - chr6_1:22612650-22612669 Msa0879770:intron 20.0%
!!! AATATTTTTATCTTTGACCT+TGG - chr6_1:22613084-22613103 Msa0879770:intron 20.0%
!! TGTCTTAATTAAAGTTTATG+AGG - chr6_1:22613811-22613830 Msa0879770:five_prime_UTR 20.0%
!! GTCTTAATTAAAGTTTATGA+GGG - chr6_1:22613812-22613831 Msa0879770:five_prime_UTR 20.0%
!! AATTACAATAACTAATGAGA+AGG - chr6_1:22613994-22614013 Msa0879770:intron 20.0%
!! ATTACAATAACTAATGAGAA+GGG - chr6_1:22613995-22614014 Msa0879770:intron 20.0%
! ACAAAAAGAACAAAGAAGAA+AGG + chr6_1:22605101-22605120 None:intergenic 25.0%
! AAACTTATGGAAGAAATTGA+AGG + chr6_1:22605154-22605173 None:intergenic 25.0%
! TTTCATACAGAAAGATTTCA+GGG + chr6_1:22605261-22605280 None:intergenic 25.0%
!! TTTTCATACAGAAAGATTTC+AGG + chr6_1:22605262-22605281 None:intergenic 25.0%
! CTTTCTGTATGAAAATTCAT+TGG - chr6_1:22605267-22605286 Msa0879770:three_prime_UTR 25.0%
!!! TTATTCTGTTTTTGGTGATT+TGG - chr6_1:22605389-22605408 Msa0879770:three_prime_UTR 25.0%
! TGAGTACATGAAAATTGAAA+GGG + chr6_1:22605703-22605722 None:intergenic 25.0%
! TTGAGTACATGAAAATTGAA+AGG + chr6_1:22605704-22605723 None:intergenic 25.0%
! GACTTGAATAATTATATGTG+GGG - chr6_1:22606222-22606241 Msa0879770:CDS 25.0%
! TATCTCAAATATGTTCTCAT+TGG - chr6_1:22606306-22606325 Msa0879770:CDS 25.0%
! ATACATGTAGTAAAAGGAAA+TGG + chr6_1:22606463-22606482 None:intergenic 25.0%
! CATAAGACAAAAGTTATATG+TGG - chr6_1:22606529-22606548 Msa0879770:CDS 25.0%
!! TACTACCTTAATTTTTGTCA+TGG + chr6_1:22607085-22607104 None:intergenic 25.0%
!! ATAATTTGGTGAAACATCAA+AGG + chr6_1:22607133-22607152 None:intergenic 25.0%
!! ATTAACACCATTTTATACAC+AGG + chr6_1:22607165-22607184 None:intergenic 25.0%
! AGTATTTATAGTGACTTTGT+TGG - chr6_1:22607297-22607316 Msa0879770:intron 25.0%
! GAGATACATAAAATTCAATG+AGG + chr6_1:22607454-22607473 None:intergenic 25.0%
! TCATCATCAACAATATTGTA+AGG + chr6_1:22607492-22607511 None:intergenic 25.0%
!! TGATGATGATACCATTTAAT+TGG - chr6_1:22607503-22607522 Msa0879770:intron 25.0%
! ATCAACATCTTCCAATTAAA+TGG + chr6_1:22607517-22607536 None:intergenic 25.0%
!! TGATGATGATACCATTTAAT+TGG - chr6_1:22607503-22607522 Msa0879770:intron 25.0%
!! CTCATTTTCTTCCAATTAAA+TGG + chr6_1:22607547-22607566 None:intergenic 25.0%
! CATTTAATTGGAAGAAAATG+AGG - chr6_1:22607545-22607564 Msa0879770:intron 25.0%
! AAATTATCCAATCTCATATC+AGG + chr6_1:22607591-22607610 None:intergenic 25.0%
!! TTTATTGTAGCTTCTTTTAG+GGG + chr6_1:22607665-22607684 None:intergenic 25.0%
!!! AATTTTAGGTACTAAAAAGC+AGG - chr6_1:22607707-22607726 Msa0879770:intron 25.0%
!!! ATTTTAGGTACTAAAAAGCA+GGG - chr6_1:22607708-22607727 Msa0879770:intron 25.0%
! GTAGGTTGCAAATAATAATA+AGG + chr6_1:22607921-22607940 None:intergenic 25.0%
! ATAAACAAACCTGTACAATA+TGG + chr6_1:22607974-22607993 None:intergenic 25.0%
! AATTGTTCCAATTATGAACT+CGG + chr6_1:22608098-22608117 None:intergenic 25.0%
!!! TATCTTAACTATTGATTCGA+TGG - chr6_1:22608131-22608150 Msa0879770:intron 25.0%
!!! ATCTTAACTATTGATTCGAT+GGG - chr6_1:22608132-22608151 Msa0879770:intron 25.0%
! TGATTAAGGTTTGAAAATGT+TGG - chr6_1:22608169-22608188 Msa0879770:intron 25.0%
! GATTAAGGTTTGAAAATGTT+GGG - chr6_1:22608170-22608189 Msa0879770:intron 25.0%
!!! TAGGTCTAATTTTTTTGGTA+AGG + chr6_1:22608448-22608467 None:intergenic 25.0%
! TAAGACATTACAACAAACTT+TGG + chr6_1:22608592-22608611 None:intergenic 25.0%
!!! TTGTTTTGCTTCTTTTTTGT+CGG - chr6_1:22608621-22608640 Msa0879770:intron 25.0%
!! TTATACTTGTTACACAATTG+TGG + chr6_1:22608687-22608706 None:intergenic 25.0%
! AGTATAATTGGGAAACAAAT+AGG - chr6_1:22608700-22608719 Msa0879770:intron 25.0%
! AACAAATAGGATGTCATATT+TGG - chr6_1:22608713-22608732 Msa0879770:intron 25.0%
! ACAAATAGGATGTCATATTT+GGG - chr6_1:22608714-22608733 Msa0879770:intron 25.0%
! TCATATTTGGGAAAATTAGT+CGG - chr6_1:22608726-22608745 Msa0879770:intron 25.0%
!!! TTTACATCTTTTTTGTTGAC+AGG - chr6_1:22608786-22608805 Msa0879770:intron 25.0%
!!! AAAGACTCATTTTAATCCAA+GGG + chr6_1:22609085-22609104 None:intergenic 25.0%
!!! TAAAGACTCATTTTAATCCA+AGG + chr6_1:22609086-22609105 None:intergenic 25.0%
!!! AGCAAAAAACTTGTTTTTTG+AGG - chr6_1:22609216-22609235 Msa0879770:intron 25.0%
!!! CTTTTTCTGGAAAAATAGTT+TGG - chr6_1:22609609-22609628 Msa0879770:intron 25.0%
!!! CAAACAAAAACTTGTTAAGT+CGG - chr6_1:22609751-22609770 Msa0879770:intron 25.0%
! ATCTGTTAAGTCAGTTAAAA+GGG + chr6_1:22609812-22609831 None:intergenic 25.0%
! TATCTGTTAAGTCAGTTAAA+AGG + chr6_1:22609813-22609832 None:intergenic 25.0%
! TAACAGATAATTTCTTAAGG+CGG - chr6_1:22609824-22609843 Msa0879770:intron 25.0%
! AAGAATATACTTCTTATGAC+AGG - chr6_1:22609865-22609884 Msa0879770:intron 25.0%
!!! TTAAAAAGGGCTTTTTAAGT+CGG + chr6_1:22609913-22609932 None:intergenic 25.0%
!!! CTTTTTAAGTCGGTTAAAAA+GGG + chr6_1:22609926-22609945 None:intergenic 25.0%
!!! CTTTTTAACCGACTTAAAAA+GGG - chr6_1:22609925-22609944 Msa0879770:intron 25.0%
!!! TCAAAAAACCCTTTTTAAGT+CGG + chr6_1:22609936-22609955 None:intergenic 25.0%
!! TCATGTTTTACCATCTATTA+TGG - chr6_1:22609991-22610010 Msa0879770:intron 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr6_1:22610160-22610179 None:intergenic 25.0%
!! AGTTAAGCATGTTTTATGTT+TGG - chr6_1:22610297-22610316 Msa0879770:intron 25.0%
!! GTTAAGCATGTTTTATGTTT+GGG - chr6_1:22610298-22610317 Msa0879770:intron 25.0%
!! TTAAGCATGTTTTATGTTTG+GGG - chr6_1:22610299-22610318 Msa0879770:intron 25.0%
! GAAAAGGCTTAAATATTCAT+TGG - chr6_1:22610395-22610414 Msa0879770:intron 25.0%
!! TTTGAATTCTTTTGATACGT+CGG - chr6_1:22610424-22610443 Msa0879770:intron 25.0%
!!! TTCCTAATGTCTTTAAGTTT+TGG - chr6_1:22610531-22610550 Msa0879770:five_prime_UTR 25.0%
! AACCAAAACTTAAAGACATT+AGG + chr6_1:22610536-22610555 None:intergenic 25.0%
! AGCATTATAACAACAAAGAT+TGG - chr6_1:22610654-22610673 Msa0879770:intron 25.0%
! ATAACAACAAAGATTGGATT+TGG - chr6_1:22610660-22610679 Msa0879770:intron 25.0%
!! GTATATCCATTAAGTTGTTT+AGG - chr6_1:22610949-22610968 Msa0879770:intron 25.0%
!!! GGGATTTTATTTATGTAAAC+TGG - chr6_1:22611270-22611289 Msa0879770:intron 25.0%
!!! ATGTTTGATGATCTAGTTTT+TGG - chr6_1:22611353-22611372 Msa0879770:intron 25.0%
!!! GGATTTTCAAGATTTTAAAG+AGG + chr6_1:22611692-22611711 None:intergenic 25.0%
!! TTCTTGATGCAAGATTTTAA+TGG + chr6_1:22611742-22611761 None:intergenic 25.0%
!! GTATTGGATTGAGATTTTAA+AGG + chr6_1:22611872-22611891 None:intergenic 25.0%
! AAAATGTGACTAGTATCTTA+GGG + chr6_1:22611899-22611918 None:intergenic 25.0%
! AAAAATGTGACTAGTATCTT+AGG + chr6_1:22611900-22611919 None:intergenic 25.0%
!! TTTGAATTGGCTTCAAAATT+TGG + chr6_1:22612210-22612229 None:intergenic 25.0%
! TTTGTAGTGAAGATTTGAAT+TGG + chr6_1:22612223-22612242 None:intergenic 25.0%
! ATTCAAATCTTCACTACAAA+CGG - chr6_1:22612223-22612242 Msa0879770:intron 25.0%
! GAAATTATTCACAATGATCA+AGG - chr6_1:22612359-22612378 Msa0879770:five_prime_UTR 25.0%
!! ATATTATCCATCACCATTTT+AGG - chr6_1:22612581-22612600 Msa0879770:five_prime_UTR 25.0%
!! TATTATCCATCACCATTTTA+GGG - chr6_1:22612582-22612601 Msa0879770:five_prime_UTR 25.0%
! TTGCATCTGCAAAAAATTAA+GGG + chr6_1:22612687-22612706 None:intergenic 25.0%
! TTTGCATCTGCAAAAAATTA+AGG + chr6_1:22612688-22612707 None:intergenic 25.0%
! ATCATTAAAATAAGCAGGTA+CGG + chr6_1:22612935-22612954 None:intergenic 25.0%
! TGTGAATCATTAAAATAAGC+AGG + chr6_1:22612940-22612959 None:intergenic 25.0%
! ATTGTAAAGCATACTTTGAA+AGG + chr6_1:22613914-22613933 None:intergenic 25.0%
!!! AATTTCATTTTTATTGCCAC+TGG + chr6_1:22613978-22613997 None:intergenic 25.0%
ACATGCTTGAAACAAAGATT+AGG + chr6_1:22605027-22605046 None:intergenic 30.0%
AAGAACAAAGAAGAAAGGAT+GGG + chr6_1:22605096-22605115 None:intergenic 30.0%
AAAGAACAAAGAAGAAAGGA+TGG + chr6_1:22605097-22605116 None:intergenic 30.0%
ACTTGTTTACAAGGTAACAA+GGG + chr6_1:22605304-22605323 None:intergenic 30.0%
! AACTTGTTTACAAGGTAACA+AGG + chr6_1:22605305-22605324 None:intergenic 30.0%
! TAAAGACACAAACTTTTCTC+AGG + chr6_1:22605444-22605463 None:intergenic 30.0%
!! TATGACTTGTTGCACAAAAT+AGG - chr6_1:22605617-22605636 Msa0879770:three_prime_UTR 30.0%
GAGTACATGAAAATTGAAAG+GGG + chr6_1:22605702-22605721 None:intergenic 30.0%
AAATCCGCAAATTGAACAAA+GGG + chr6_1:22605749-22605768 None:intergenic 30.0%
! TTTGTTAGTGCAATTGATTC+AGG - chr6_1:22605862-22605881 Msa0879770:three_prime_UTR 30.0%
! TATAGGCTGAGTTTCTAAAA+TGG - chr6_1:22605969-22605988 Msa0879770:three_prime_UTR 30.0%
TAATAAATGGTTGTCCATGA+TGG - chr6_1:22606016-22606035 Msa0879770:three_prime_UTR 30.0%
TCTAATTAAGTGTACCATCA+TGG + chr6_1:22606033-22606052 None:intergenic 30.0%
GAGTGTAGAAAATCTATTTG+TGG - chr6_1:22606051-22606070 Msa0879770:three_prime_UTR 30.0%
TGTAGAAAATCTATTTGTGG+AGG - chr6_1:22606054-22606073 Msa0879770:three_prime_UTR 30.0%
TTAAGAAAATCATGGGATCA+TGG - chr6_1:22606109-22606128 Msa0879770:three_prime_UTR 30.0%
GAACACAAAATCAGTTTGTA+AGG + chr6_1:22606260-22606279 None:intergenic 30.0%
AAAATCAACCTAATTGTCGA+AGG + chr6_1:22606369-22606388 None:intergenic 30.0%
! CGATCATTATAATTTGCAGA+AGG + chr6_1:22606409-22606428 None:intergenic 30.0%
!! AATCTAGAGAGATTTGCTAA+TGG - chr6_1:22606979-22606998 Msa0879770:CDS 30.0%
CATATATACCATTTGGACTT+GGG - chr6_1:22607031-22607050 Msa0879770:CDS 30.0%
CTTTGCCATGACAAAAATTA+AGG - chr6_1:22607077-22607096 Msa0879770:CDS 30.0%
! ATGGTGTTAATGCCAAAATA+TGG - chr6_1:22607174-22607193 Msa0879770:five_prime_UTR 30.0%
AGAACGCAGAAAAATGATTA+TGG - chr6_1:22607223-22607242 Msa0879770:five_prime_UTR 30.0%
ATTGGAAGAAAATGAGGATT+AGG - chr6_1:22607551-22607570 Msa0879770:intron 30.0%
TTACTATCCTGATATGAGAT+TGG - chr6_1:22607581-22607600 Msa0879770:intron 30.0%
! TTATTGTAGCTTCTTTTAGG+GGG + chr6_1:22607664-22607683 None:intergenic 30.0%
GATTTAGGCTTAACAAATGA+TGG - chr6_1:22607735-22607754 Msa0879770:intron 30.0%
!!! TTCCTTATCTCATTTTGGTT+TGG - chr6_1:22607803-22607822 Msa0879770:intron 30.0%
AACCAAACCAAAATGAGATA+AGG + chr6_1:22607808-22607827 None:intergenic 30.0%
!!! TCATTTTGGTTTGGTTTTTC+AGG - chr6_1:22607812-22607831 Msa0879770:intron 30.0%
!! TTTCAGGTTATAGAAATGTC+TGG - chr6_1:22607828-22607847 Msa0879770:intron 30.0%
GGTTGCAAATAATAATAAGG+AGG + chr6_1:22607918-22607937 None:intergenic 30.0%
TATGGAAAACCTGTACAATA+TGG + chr6_1:22607956-22607975 None:intergenic 30.0%
ATTGAGGATACAATGAAAGA+TGG + chr6_1:22608000-22608019 None:intergenic 30.0%
ATTGTATCCTCAATCTATGA+AGG - chr6_1:22608006-22608025 Msa0879770:intron 30.0%
GACAATTATAAAAGAAACCC+AGG + chr6_1:22608041-22608060 None:intergenic 30.0%
! ATTTTCAAACCTTAATCAGC+AGG + chr6_1:22608167-22608186 None:intergenic 30.0%
CATTGAGATATCAACAGAAT+TGG + chr6_1:22608305-22608324 None:intergenic 30.0%
ATTCTGTTGATATCTCAATG+AGG - chr6_1:22608305-22608324 Msa0879770:intron 30.0%
TGTTGATGTTCCTTAACTAT+GGG - chr6_1:22608403-22608422 Msa0879770:intron 30.0%
TGGTAAGGTTTGAAAATGTT+GGG + chr6_1:22608433-22608452 None:intergenic 30.0%
TTGGTAAGGTTTGAAAATGT+TGG + chr6_1:22608434-22608453 None:intergenic 30.0%
AAACTTTGGTTGAACAATAG+TGG + chr6_1:22608578-22608597 None:intergenic 30.0%
!! AGATTTTCGAGAATTTTGCA+CGG - chr6_1:22608656-22608675 Msa0879770:intron 30.0%
TTATCTGCCAAAATAAGCAT+TGG - chr6_1:22608979-22608998 Msa0879770:intron 30.0%
TATCTGCCAAAATAAGCATT+GGG - chr6_1:22608980-22608999 Msa0879770:intron 30.0%
!!! TATTTTTCAGGGAGAAAGAA+AGG - chr6_1:22609283-22609302 Msa0879770:intron 30.0%
!! CAAGTTTTTGTTTGCTAAGT+TGG + chr6_1:22609745-22609764 None:intergenic 30.0%
! TTAAAAGGGCTTTTTATGTC+GGG + chr6_1:22609798-22609817 None:intergenic 30.0%
! GTTAAAAGGGCTTTTTATGT+CGG + chr6_1:22609799-22609818 None:intergenic 30.0%
!!! TAAAAAGGGCTTTTTAAGTC+GGG + chr6_1:22609912-22609931 None:intergenic 30.0%
!!! CCTTTTTAAGTCGGTTAAAA+AGG + chr6_1:22609927-22609946 None:intergenic 30.0%
!! CCTTTTTAACCGACTTAAAA+AGG - chr6_1:22609924-22609943 Msa0879770:intron 30.0%
ACATGACTGTTTGATTAAGA+TGG + chr6_1:22609977-22609996 None:intergenic 30.0%
! AGTAATCTTTCGTTCTAGAT+AGG + chr6_1:22610018-22610037 None:intergenic 30.0%
AACTAATAAGCTATGAAGCA+TGG + chr6_1:22610281-22610300 None:intergenic 30.0%
! TTGAATTCTTTTGATACGTC+GGG - chr6_1:22610425-22610444 Msa0879770:intron 30.0%
! TTGAATACTGTATTGGCATA+GGG + chr6_1:22610711-22610730 None:intergenic 30.0%
! TTTGAATACTGTATTGGCAT+AGG + chr6_1:22610712-22610731 None:intergenic 30.0%
! TTGAGAGAGTGTAACAAATT+GGG - chr6_1:22610777-22610796 Msa0879770:intron 30.0%
ACAAATTGGGTGTAAAAACA+AGG - chr6_1:22610790-22610809 Msa0879770:intron 30.0%
TGAAGATATGGAAAGAATGT+TGG - chr6_1:22610841-22610860 Msa0879770:intron 30.0%
TGAAAATCAGTTCTTGGAAT+TGG - chr6_1:22610870-22610889 Msa0879770:intron 30.0%
! TCCATTAAGTTGTTTAGGAT+TGG - chr6_1:22610954-22610973 Msa0879770:intron 30.0%
ACCAATCCTAAACAACTTAA+TGG + chr6_1:22610958-22610977 None:intergenic 30.0%
! ATTAAGTTGTTTAGGATTGG+TGG - chr6_1:22610957-22610976 Msa0879770:intron 30.0%
! TTAAGTTGTTTAGGATTGGT+GGG - chr6_1:22610958-22610977 Msa0879770:intron 30.0%
! AAGGGACAATTTTATGTTCT+TGG - chr6_1:22611087-22611106 Msa0879770:five_prime_UTR 30.0%
! AATTTTATGTTCTTGGTGGA+AGG - chr6_1:22611094-22611113 Msa0879770:five_prime_UTR 30.0%
AAATGAGGTGGAAAGTAAAA+TGG - chr6_1:22611163-22611182 Msa0879770:five_prime_UTR 30.0%
TTTATGTAAACTGGTTAACC+TGG - chr6_1:22611279-22611298 Msa0879770:intron 30.0%
TTATGTAAACTGGTTAACCT+GGG - chr6_1:22611280-22611299 Msa0879770:intron 30.0%
CATATACCAAATTAATACCC+AGG + chr6_1:22611300-22611319 None:intergenic 30.0%
!! TTGGATTGTATTGACTTTGT+GGG + chr6_1:22611806-22611825 None:intergenic 30.0%
AAATGTGACTAGTATCTTAG+GGG + chr6_1:22611898-22611917 None:intergenic 30.0%
AATACTAGTCACATTGAAGA+AGG - chr6_1:22611974-22611993 Msa0879770:intron 30.0%
!! TGTGAAGTAGTATTTTGGAA+AGG + chr6_1:22612168-22612187 None:intergenic 30.0%
! TGTAGTGTGAAGTAGTATTT+TGG + chr6_1:22612173-22612192 None:intergenic 30.0%
ACTATGGCAAACAAATATGA+GGG - chr6_1:22612263-22612282 Msa0879770:intron 30.0%
TAAATTACCAAAGACAGTGT+TGG + chr6_1:22612474-22612493 None:intergenic 30.0%
AAAGTAAACAAGCCCTAAAA+TGG + chr6_1:22612597-22612616 None:intergenic 30.0%
!!! AATTTTTTGCAGATGCAAAG+AGG - chr6_1:22612689-22612708 Msa0879770:intron 30.0%
TTGTAGTTCACAAGAATTGT+CGG + chr6_1:22612802-22612821 None:intergenic 30.0%
ACAATTCTTGTGAACTACAA+GGG - chr6_1:22612802-22612821 Msa0879770:intron 30.0%
GTAATTACTGCATTCTTAAC+AGG + chr6_1:22612913-22612932 None:intergenic 30.0%
! ATTTTTATCTTTGACCTTGG+CGG - chr6_1:22613087-22613106 Msa0879770:intron 30.0%
AAATAAGGTCTTTGATGTCA+AGG - chr6_1:22613143-22613162 Msa0879770:intron 30.0%
! TGAAGACTTTGATAACAGAA+TGG - chr6_1:22613194-22613213 Msa0879770:intron 30.0%
AAGAACAAAGAGGATATTAG+TGG - chr6_1:22613245-22613264 Msa0879770:intron 30.0%
AGAACAAAGAGGATATTAGT+GGG - chr6_1:22613246-22613265 Msa0879770:intron 30.0%
TACCTTGATATATAGCATCT+AGG + chr6_1:22613355-22613374 None:intergenic 30.0%
! ACTTTTGTTCATCAATCACT+CGG - chr6_1:22613378-22613397 Msa0879770:intron 30.0%
CATATTCAATTGCTCAAACT+TGG + chr6_1:22613405-22613424 None:intergenic 30.0%
CAAGTTTGAGCAATTGAATA+TGG - chr6_1:22613403-22613422 Msa0879770:intron 30.0%
! TGTACATACACTTTTCAAAG+AGG + chr6_1:22613430-22613449 None:intergenic 30.0%
!! TATTGCAGGAGTTTTTCAAA+GGG - chr6_1:22613549-22613568 Msa0879770:intron 30.0%
! TATTCTTTAGTCCTTTTGAC+AGG + chr6_1:22613764-22613783 None:intergenic 30.0%
CTTTAATTAAGACAGTGCTT+TGG + chr6_1:22613805-22613824 None:intergenic 30.0%
! TAAAGCATACTTTGAAAGGA+TGG + chr6_1:22613910-22613929 None:intergenic 30.0%
AGAAGATATCTTTGTGTTTG+TGG - chr6_1:22614252-22614271 Msa0879770:intron 30.0%
AAGAAGAACGACGAAAACAA+TGG + chr6_1:22604931-22604950 None:intergenic 35.0%
!! ATACCGTTGTTTTGTTCTCA+CGG + chr6_1:22604986-22605005 None:intergenic 35.0%
TACAGAAAGATTTCAGGGTT+TGG + chr6_1:22605256-22605275 None:intergenic 35.0%
TTTACAAGGTAACAAGGGAT+TGG + chr6_1:22605299-22605318 None:intergenic 35.0%
!!! ATTGTGTTTTGATTGACACG+TGG - chr6_1:22605348-22605367 Msa0879770:three_prime_UTR 35.0%
!!! TTGTGTTTTGATTGACACGT+GGG - chr6_1:22605349-22605368 Msa0879770:three_prime_UTR 35.0%
! GGTTGTGCTTATTCTGTTTT+TGG - chr6_1:22605381-22605400 Msa0879770:three_prime_UTR 35.0%
TCTCAGGAATTTCATCAAAC+AGG + chr6_1:22605428-22605447 None:intergenic 35.0%
AGCATATCTACAAATCATCG+AGG + chr6_1:22605469-22605488 None:intergenic 35.0%
GAAGTGAAAAACTGAAGAAG+AGG - chr6_1:22605547-22605566 Msa0879770:three_prime_UTR 35.0%
TGAAAAACTGAAGAAGAGGA+TGG - chr6_1:22605551-22605570 Msa0879770:three_prime_UTR 35.0%
TAACCCCTTTGTTCAATTTG+CGG - chr6_1:22605742-22605761 Msa0879770:three_prime_UTR 35.0%
AATCCGCAAATTGAACAAAG+GGG + chr6_1:22605748-22605767 None:intergenic 35.0%
GAAATCCGCAAATTGAACAA+AGG + chr6_1:22605750-22605769 None:intergenic 35.0%
! CTTTTATGATTGACTGACAC+AGG - chr6_1:22605777-22605796 Msa0879770:three_prime_UTR 35.0%
!! AGGTAATTGGTTTGTGTTTG+TGG - chr6_1:22605890-22605909 Msa0879770:three_prime_UTR 35.0%
!! GCTGAGTTTCTAAAATGGTA+GGG - chr6_1:22605974-22605993 Msa0879770:three_prime_UTR 35.0%
! GACACTGAAGGCATAATAAA+TGG - chr6_1:22606003-22606022 Msa0879770:three_prime_UTR 35.0%
! TTTGTGGAGGTTTTCTGAAT+AGG - chr6_1:22606067-22606086 Msa0879770:three_prime_UTR 35.0%
TGAATAGGTTACTCGATACT+AGG - chr6_1:22606082-22606101 Msa0879770:three_prime_UTR 35.0%
GAATAGGTTACTCGATACTA+GGG - chr6_1:22606083-22606102 Msa0879770:three_prime_UTR 35.0%
AATAGGTTACTCGATACTAG+GGG - chr6_1:22606084-22606103 Msa0879770:three_prime_UTR 35.0%
TAGGGGAGTTAAGAAAATCA+TGG - chr6_1:22606101-22606120 Msa0879770:three_prime_UTR 35.0%
AGGGGAGTTAAGAAAATCAT+GGG - chr6_1:22606102-22606121 Msa0879770:three_prime_UTR 35.0%
!! GTTGATGGTGCTCAAATTAT+TGG - chr6_1:22606134-22606153 Msa0879770:CDS 35.0%
GAACATGTCTAAGTCCTTAT+AGG - chr6_1:22606434-22606453 Msa0879770:CDS 35.0%
! AAAGGAAATGGACTCCTATA+AGG + chr6_1:22606451-22606470 None:intergenic 35.0%
! TTTCCTTTTGCAGCTAACAA+TGG - chr6_1:22606786-22606805 Msa0879770:intron 35.0%
!!! AGTTTTAGCTGAGATGAAGT+TGG - chr6_1:22606861-22606880 Msa0879770:intron 35.0%
!!! GTTTTAGCTGAGATGAAGTT+GGG - chr6_1:22606862-22606881 Msa0879770:intron 35.0%
GGAGAATTTATGCTACCTAA+AGG - chr6_1:22606883-22606902 Msa0879770:intron 35.0%
AACTACATGTAGATGCCTTT+AGG + chr6_1:22606901-22606920 None:intergenic 35.0%
GCATCTACATGTAGTTATTC+TGG - chr6_1:22606905-22606924 Msa0879770:intron 35.0%
AGATTGAACTTTGTAGCATC+TGG + chr6_1:22606964-22606983 None:intergenic 35.0%
GCATATATACCATTTGGACT+TGG - chr6_1:22607030-22607049 Msa0879770:CDS 35.0%
! CCATTTTATACACAGGACAA+TGG + chr6_1:22607158-22607177 None:intergenic 35.0%
CCATTGTCCTGTGTATAAAA+TGG - chr6_1:22607155-22607174 Msa0879770:five_prime_UTR 35.0%
! AGAAGTCGTACACCATATTT+TGG + chr6_1:22607189-22607208 None:intergenic 35.0%
ATGTACAAGATAGAAGACAC+CGG + chr6_1:22607385-22607404 None:intergenic 35.0%
AAAAAGCAGGGATGTGATTT+AGG - chr6_1:22607720-22607739 Msa0879770:intron 35.0%
ATAAGGAACACAGTACATCT+GGG + chr6_1:22607791-22607810 None:intergenic 35.0%
! CTGTGTTCCTTATCTCATTT+TGG - chr6_1:22607798-22607817 Msa0879770:intron 35.0%
TTATTATTTGCAACCTACGC+TGG - chr6_1:22607923-22607942 Msa0879770:intron 35.0%
! ACAGGTTTTCCATATTGTAC+AGG - chr6_1:22607962-22607981 Msa0879770:intron 35.0%
CAAAGAACCTTCATAGATTG+AGG + chr6_1:22608016-22608035 None:intergenic 35.0%
CTCAATCTATGAAGGTTCTT+TGG - chr6_1:22608014-22608033 Msa0879770:intron 35.0%
CATATCTCTGTCAAGTAACA+TGG + chr6_1:22608256-22608275 None:intergenic 35.0%
! CATGTTACTTGACAGAGATA+TGG - chr6_1:22608254-22608273 Msa0879770:intron 35.0%
AGATATCAACAGAATTGGAC+GGG + chr6_1:22608300-22608319 None:intergenic 35.0%
GAGATATCAACAGAATTGGA+CGG + chr6_1:22608301-22608320 None:intergenic 35.0%
! GAGGAAGTACAGAAGAATAT+TGG - chr6_1:22608324-22608343 Msa0879770:intron 35.0%
TATATCAGTTAGAACCCAAC+AGG - chr6_1:22608347-22608366 Msa0879770:intron 35.0%
ATATCAGTTAGAACCCAACA+GGG - chr6_1:22608348-22608367 Msa0879770:intron 35.0%
GTTTCGTGTTCCTTAACTAT+GGG + chr6_1:22608378-22608397 None:intergenic 35.0%
CTGTTGATGTTCCTTAACTA+TGG - chr6_1:22608402-22608421 Msa0879770:intron 35.0%
GAAAGTAGAACACTGTGAAT+TGG - chr6_1:22608813-22608832 Msa0879770:intron 35.0%
! TGAATTGGTTCATGTGATTG+TGG - chr6_1:22608828-22608847 Msa0879770:intron 35.0%
GGCAATACAAATACGATTAG+CGG + chr6_1:22608854-22608873 None:intergenic 35.0%
! CATGAACCCAATGCTTATTT+TGG + chr6_1:22608989-22609008 None:intergenic 35.0%
ATCAGTATCCACAAACTGTT+CGG + chr6_1:22609053-22609072 None:intergenic 35.0%
TACTGATACAGAATTACCCT+TGG - chr6_1:22609066-22609085 Msa0879770:intron 35.0%
!! ATTACGGCTGTCTATTTTTC+AGG - chr6_1:22609271-22609290 Msa0879770:intron 35.0%
!! TTACGGCTGTCTATTTTTCA+GGG - chr6_1:22609272-22609291 Msa0879770:intron 35.0%
! AAAGCATTTCAACGTTTCCA+TGG - chr6_1:22609311-22609330 Msa0879770:intron 35.0%
!! ACAAAAACTTGTTAAGTCGG+CGG - chr6_1:22609754-22609773 Msa0879770:intron 35.0%
TTCTTATGACAGGAGCTATT+AGG - chr6_1:22609875-22609894 Msa0879770:intron 35.0%
CTAGATAGGACCATAATAGA+TGG + chr6_1:22610004-22610023 None:intergenic 35.0%
CATTGCTTCATCAATCAACT+AGG + chr6_1:22610334-22610353 None:intergenic 35.0%
!! GTATTGGAATTCAAGTTGAG+TGG - chr6_1:22610447-22610466 Msa0879770:intron 35.0%
TTTAACCAATGTACCTTCCT+AGG + chr6_1:22610740-22610759 None:intergenic 35.0%
! AGGAAGGTACATTGGTTAAA+TGG - chr6_1:22610740-22610759 Msa0879770:intron 35.0%
! GGAAGGTACATTGGTTAAAT+GGG - chr6_1:22610741-22610760 Msa0879770:intron 35.0%
! TACATTGGTTAAATGGGAGA+GGG - chr6_1:22610747-22610766 Msa0879770:intron 35.0%
! CTTGAGAGAGTGTAACAAAT+TGG - chr6_1:22610776-22610795 Msa0879770:intron 35.0%
AGATATGGAAAGAATGTTGG+AGG - chr6_1:22610844-22610863 Msa0879770:intron 35.0%
TGTGAAAGTCAAACTGTCAA+AGG - chr6_1:22610898-22610917 Msa0879770:intron 35.0%
! AGTCAAACTGTCAAAGGTTT+TGG - chr6_1:22610904-22610923 Msa0879770:intron 35.0%
! AGAGTGGTATTGAATTTGAG+AGG - chr6_1:22610987-22611006 Msa0879770:intron 35.0%
! GGACAATTTTATGTTCTTGG+TGG - chr6_1:22611090-22611109 Msa0879770:five_prime_UTR 35.0%
GGTTAACCTGGGTATTAATT+TGG - chr6_1:22611291-22611310 Msa0879770:intron 35.0%
!! GTTGGATTGTATTGACTTTG+TGG + chr6_1:22611807-22611826 None:intergenic 35.0%
AATGTGACTAGTATCTTAGG+GGG + chr6_1:22611897-22611916 None:intergenic 35.0%
ACTAGCTATCACATTGAAGA+AGG - chr6_1:22612023-22612042 Msa0879770:intron 35.0%
CATTGAAGAAGGAAAAGTCA+TGG - chr6_1:22612034-22612053 Msa0879770:intron 35.0%
! TTCATTCACTTGAAGCACTA+TGG - chr6_1:22612247-22612266 Msa0879770:intron 35.0%
CACTATGGCAAACAAATATG+AGG - chr6_1:22612262-22612281 Msa0879770:intron 35.0%
TTAGTGAAAGCAACACAAGA+AGG + chr6_1:22612398-22612417 None:intergenic 35.0%
TTGCTTTCACTAATTCCCAA+AGG - chr6_1:22612405-22612424 Msa0879770:five_prime_UTR 35.0%
! GTTAGAAGAAGCCTGATTTT+TGG + chr6_1:22612447-22612466 None:intergenic 35.0%
ATGCAAAGAGGTTAATTGGA+AGG - chr6_1:22612701-22612720 Msa0879770:intron 35.0%
CAGTAGATCATTCTGAACAA+TGG + chr6_1:22612740-22612759 None:intergenic 35.0%
TTCAGAATGATCTACTGTTG+TGG - chr6_1:22612743-22612762 Msa0879770:intron 35.0%
GACAATTCTTGTGAACTACA+AGG - chr6_1:22612801-22612820 Msa0879770:intron 35.0%
!! CACAATTAGCTCTCTTTTGA+AGG + chr6_1:22613053-22613072 None:intergenic 35.0%
AATGGTGAATCACTTTGTGA+AGG - chr6_1:22613212-22613231 Msa0879770:intron 35.0%
TATAGCATCTAGGTCAATTG+TGG + chr6_1:22613345-22613364 None:intergenic 35.0%
GACCTAGATGCTATATATCA+AGG - chr6_1:22613350-22613369 Msa0879770:intron 35.0%
! CTTTTGTTCATCAATCACTC+GGG - chr6_1:22613379-22613398 Msa0879770:intron 35.0%
! CTGTCTTGTTGATGCTAAAA+TGG - chr6_1:22613460-22613479 Msa0879770:intron 35.0%
!! CTATTGCAGGAGTTTTTCAA+AGG - chr6_1:22613548-22613567 Msa0879770:intron 35.0%
! ATTGACTTACCAAGTGACAA+TGG + chr6_1:22613695-22613714 None:intergenic 35.0%
! TGTCACTTGGTAAGTCAATT+AGG - chr6_1:22613696-22613715 Msa0879770:intron 35.0%
GTCACTTGGTAAGTCAATTA+GGG - chr6_1:22613697-22613716 Msa0879770:intron 35.0%
TCACTTGGTAAGTCAATTAG+GGG - chr6_1:22613698-22613717 Msa0879770:intron 35.0%
TAGGGGAGATATTATGAATG+TGG - chr6_1:22613715-22613734 Msa0879770:intron 35.0%
TTATGAATGTGGTGATTCCA+AGG - chr6_1:22613726-22613745 Msa0879770:intron 35.0%
! TTTAGTCCTTTTGACAGGAA+TGG + chr6_1:22613759-22613778 None:intergenic 35.0%
TGCTTTACAATAGATGCTGA+TGG - chr6_1:22613923-22613942 Msa0879770:intron 35.0%
ATGAGAAGGGAAGATTATCA+AGG - chr6_1:22614008-22614027 Msa0879770:intron 35.0%
TGAGAAGGGAAGATTATCAA+GGG - chr6_1:22614009-22614028 Msa0879770:intron 35.0%
ACAAATTGACAGAATGATCC+AGG - chr6_1:22614033-22614052 Msa0879770:intron 35.0%
AGTTGAAGCAAGAAATGCTT+TGG - chr6_1:22614099-22614118 Msa0879770:intron 35.0%
TTGATCTTCTCTTTGTCTAC+AGG + chr6_1:22614187-22614206 None:intergenic 35.0%
ACCAAGGGAAAAAGTTTGAT+TGG - chr6_1:22614217-22614236 Msa0879770:intron 35.0%
!! ACCAATCAAACTTTTTCCCT+TGG + chr6_1:22614221-22614240 None:intergenic 35.0%
ACACAAAGATATCTTCTTGC+TGG + chr6_1:22614249-22614268 None:intergenic 35.0%
CTCTGATGAGAAAAGTGATT+CGG - chr6_1:22614336-22614355 Msa0879770:intron 35.0%
ACGACGAAAACAATGGATGT+GGG + chr6_1:22604924-22604943 None:intergenic 40.0%
AACGACGAAAACAATGGATG+TGG + chr6_1:22604925-22604944 None:intergenic 40.0%
GATTTCAGGGTTTGGAAAAG+AGG + chr6_1:22605248-22605267 None:intergenic 40.0%
! TGAGCGTGAACTTGTTTACA+AGG + chr6_1:22605313-22605332 None:intergenic 40.0%
! AGAGAAGGGAGAACCATTTT+AGG - chr6_1:22605515-22605534 Msa0879770:three_prime_UTR 40.0%
! GAGAAGGGAGAACCATTTTA+GGG - chr6_1:22605516-22605535 Msa0879770:three_prime_UTR 40.0%
CTTCTGAGTGTACCCTAAAA+TGG + chr6_1:22605531-22605550 None:intergenic 40.0%
GAGGATGGAAACATGTATCA+AGG - chr6_1:22605566-22605585 Msa0879770:three_prime_UTR 40.0%
GATGGAAACATGTATCAAGG+AGG - chr6_1:22605569-22605588 Msa0879770:three_prime_UTR 40.0%
ATCAAGGAGGTGAATAAGAG+AGG - chr6_1:22605582-22605601 Msa0879770:three_prime_UTR 40.0%
! TGCAATTGATTCAGGTCTGT+AGG - chr6_1:22605870-22605889 Msa0879770:three_prime_UTR 40.0%
GATTCAGGTCTGTAGGTAAT+TGG - chr6_1:22605877-22605896 Msa0879770:three_prime_UTR 40.0%
!! GGCTGAGTTTCTAAAATGGT+AGG - chr6_1:22605973-22605992 Msa0879770:three_prime_UTR 40.0%
AGATGCAACCTTCGACAATT+AGG - chr6_1:22606358-22606377 Msa0879770:CDS 40.0%
TATATGTGGCACACGTTCAA+TGG - chr6_1:22606543-22606562 Msa0879770:CDS 40.0%
TATATGTGGCACACGTTCAA+TGG - chr6_1:22606543-22606562 Msa0879770:CDS 40.0%
TATATGTGGCACACGTTCAA+TGG - chr6_1:22606543-22606562 Msa0879770:CDS 40.0%
TCACCATTGTTAGCTGCAAA+AGG + chr6_1:22606792-22606811 None:intergenic 40.0%
CCAAATGGTATATATGCTCG+AGG + chr6_1:22607027-22607046 None:intergenic 40.0%
CCTCGAGCATATATACCATT+TGG - chr6_1:22607024-22607043 Msa0879770:CDS 40.0%
ACAGGACAATGGCGATAATT+TGG + chr6_1:22607147-22607166 None:intergenic 40.0%
TGTACGACTTCTTGTTAGCA+AGG - chr6_1:22607197-22607216 Msa0879770:five_prime_UTR 40.0%
GATAAGGAACACAGTACATC+TGG + chr6_1:22607792-22607811 None:intergenic 40.0%
TTTGTGCAGCTTCTGACATT+TGG - chr6_1:22607853-22607872 Msa0879770:intron 40.0%
! GGCTCTTTTCCATATTGTAC+AGG - chr6_1:22607944-22607963 Msa0879770:intron 40.0%
TATGAAGGTTCTTTGGACCT+GGG - chr6_1:22608021-22608040 Msa0879770:intron 40.0%
ACAGCTACCGAGTTCATAAT+TGG - chr6_1:22608088-22608107 Msa0879770:intron 40.0%
GAAAATGTTGGGACGTTTGT+AGG - chr6_1:22608181-22608200 Msa0879770:intron 40.0%
CGTTTCGTGTTCCTTAACTA+TGG + chr6_1:22608379-22608398 None:intergenic 40.0%
GAAAACACATTCACAGCAGT+TGG + chr6_1:22608875-22608894 None:intergenic 40.0%
AAAACAGCGAGTAAATACCC+AGG + chr6_1:22608960-22608979 None:intergenic 40.0%
TCAGTATCCACAAACTGTTC+GGG + chr6_1:22609052-22609071 None:intergenic 40.0%
!! TTTTCAGGGAGAAAGAAAGG+TGG - chr6_1:22609286-22609305 Msa0879770:intron 40.0%
TTTCAGGGAGAAAGAAAGGT+GGG - chr6_1:22609287-22609306 Msa0879770:intron 40.0%
AACTTGTACCTCATAGACCA+TGG + chr6_1:22609331-22609350 None:intergenic 40.0%
! TGTAGAACAACAGAAGCATG+AGG - chr6_1:22609556-22609575 Msa0879770:intron 40.0%
ATAGTTTGGCCTGATTGAGA+AGG - chr6_1:22609623-22609642 Msa0879770:intron 40.0%
TAGTTTGGCCTGATTGAGAA+GGG - chr6_1:22609624-22609643 Msa0879770:intron 40.0%
TATGACAGGAGCTATTAGGT+CGG - chr6_1:22609879-22609898 Msa0879770:intron 40.0%
GTAATCACAAGTGTCAGTGT+CGG - chr6_1:22610196-22610215 Msa0879770:intron 40.0%
! TCTTTTGATACGTCGGGTAT+TGG - chr6_1:22610431-22610450 Msa0879770:intron 40.0%
!! TGGTTAGTTCTACGTCAACT+GGG - chr6_1:22610467-22610486 Msa0879770:five_prime_UTR 40.0%
ACTGGGAATGGAGAAAATGT+TGG - chr6_1:22610484-22610503 Msa0879770:five_prime_UTR 40.0%
! TAGTGTTGTTACGATCTCCT+AGG - chr6_1:22610560-22610579 Msa0879770:five_prime_UTR 40.0%
!!! GCGGGTTTTGAATACTGTAT+TGG + chr6_1:22610718-22610737 None:intergenic 40.0%
! GTACATTGGTTAAATGGGAG+AGG - chr6_1:22610746-22610765 Msa0879770:intron 40.0%
TATGGAAAGAATGTTGGAGG+AGG - chr6_1:22610847-22610866 Msa0879770:intron 40.0%
AGGAGGTGAAAATCAGTTCT+TGG - chr6_1:22610864-22610883 Msa0879770:intron 40.0%
! GAAAAGAAGTACAACACTGC+AGG - chr6_1:22611052-22611071 Msa0879770:intron 40.0%
TGCAGGCATAGAAGAAGTAA+GGG - chr6_1:22611069-22611088 Msa0879770:five_prime_UTR 40.0%
TGGAAGTGGGTGATAGAAAT+GGG - chr6_1:22611119-22611138 Msa0879770:five_prime_UTR 40.0%
ATCTTGGCGAGTCTTCTATT+TGG - chr6_1:22611249-22611268 Msa0879770:intron 40.0%
TCTTGGCGAGTCTTCTATTT+GGG - chr6_1:22611250-22611269 Msa0879770:intron 40.0%
ATGTGACTAGTATCTTAGGG+GGG + chr6_1:22611896-22611915 None:intergenic 40.0%
CTTCAATGTGATAGCTAGTG+AGG + chr6_1:22612022-22612041 None:intergenic 40.0%
GAAAAGTCATGGCTTCTGAT+AGG - chr6_1:22612045-22612064 Msa0879770:intron 40.0%
AAATATGAGGGAGTTGCGAT+TGG - chr6_1:22612275-22612294 Msa0879770:intron 40.0%
ACTAATTCCCAAAGGCTGAT+TGG - chr6_1:22612413-22612432 Msa0879770:five_prime_UTR 40.0%
!! TACCAAAGACAGTGTTGGTT+GGG + chr6_1:22612469-22612488 None:intergenic 40.0%
!! TTACCAAAGACAGTGTTGGT+TGG + chr6_1:22612470-22612489 None:intergenic 40.0%
AACAAGCCCTAAAATGGTGA+TGG + chr6_1:22612591-22612610 None:intergenic 40.0%
GCAGATGCAAAGAGGTTAAT+TGG - chr6_1:22612697-22612716 Msa0879770:intron 40.0%
!!! AGAGATTGCAGAGGCATTTT+TGG - chr6_1:22612882-22612901 Msa0879770:intron 40.0%
AAAGATGCAGGTGAAATTGC+TGG - chr6_1:22612973-22612992 Msa0879770:intron 40.0%
! TTGCTGGTCTCAATGTAATG+CGG - chr6_1:22612989-22613008 Msa0879770:intron 40.0%
AGTTCAGAGGAAGAACAAAG+AGG - chr6_1:22613235-22613254 Msa0879770:intron 40.0%
GACACTTTGATACGACATTG+AGG - chr6_1:22613319-22613338 Msa0879770:intron 40.0%
TGCAATAGCTGCTTCACTTT+AGG + chr6_1:22613536-22613555 None:intergenic 40.0%
TAAAGTGAAGCAGCTATTGC+AGG - chr6_1:22613535-22613554 Msa0879770:intron 40.0%
!! CGTTAAGAGTGTTCCAATCT+TGG - chr6_1:22613652-22613671 Msa0879770:intron 40.0%
ACATCTCGCAAAACCAAGAT+TGG + chr6_1:22613668-22613687 None:intergenic 40.0%
GATGTTACACCATTGTCACT+TGG - chr6_1:22613683-22613702 Msa0879770:intron 40.0%
ACACTTCCATTCCTGTCAAA+AGG - chr6_1:22613750-22613769 Msa0879770:intron 40.0%
! AATTTTGAACGTCTCTGCAG+TGG - chr6_1:22613946-22613965 Msa0879770:intron 40.0%
GAGAAGGGAAGATTATCAAG+GGG - chr6_1:22614010-22614029 Msa0879770:intron 40.0%
ATCAACTCAGCAATGACCAA+GGG - chr6_1:22614202-22614221 Msa0879770:intron 40.0%
GAGCATCTTTGAATCTGCTA+TGG - chr6_1:22614294-22614313 Msa0879770:intron 40.0%
GCTATGGACAAGATCAACAA+AGG - chr6_1:22614310-22614329 Msa0879770:intron 40.0%
!! TTGTTTTGTTCTCACGGCAG+CGG + chr6_1:22604980-22604999 None:intergenic 45.0%
CTGCCGTGAGAACAAAACAA+CGG - chr6_1:22604980-22604999 Msa0879770:three_prime_UTR 45.0%
TTGACACGTGGGTAATAGTC+TGG - chr6_1:22605360-22605379 Msa0879770:three_prime_UTR 45.0%
TCTCTGTCTTAGAGGAGGAA+CGG + chr6_1:22605500-22605519 None:intergenic 45.0%
!! TTCCTCCTCTAAGACAGAGA+AGG - chr6_1:22605500-22605519 Msa0879770:three_prime_UTR 45.0%
!! TCCTCCTCTAAGACAGAGAA+GGG - chr6_1:22605501-22605520 Msa0879770:three_prime_UTR 45.0%
TTCTCCCTTCTCTGTCTTAG+AGG + chr6_1:22605508-22605527 None:intergenic 45.0%
! GGTGAATAAGAGAGGTGTGA+AGG - chr6_1:22605590-22605609 Msa0879770:three_prime_UTR 45.0%
GTAGGGCTAAATGACACTGA+AGG - chr6_1:22605991-22606010 Msa0879770:three_prime_UTR 45.0%
CATGGGATCATGGAAGTTGA+TGG - chr6_1:22606119-22606138 Msa0879770:exon 45.0%
GACCTCTAGACCCAATAACT+GGG + chr6_1:22606168-22606187 None:intergenic 45.0%
AGACCTCTAGACCCAATAAC+TGG + chr6_1:22606169-22606188 None:intergenic 45.0%
! ATTTTACAAGCCTGCAGTCG+TGG - chr6_1:22606828-22606847 Msa0879770:intron 45.0%
CATCTCAGCTAAAACTTCCC+TGG + chr6_1:22606857-22606876 None:intergenic 45.0%
TGCATCGTGACGCTGATAAT+TGG - chr6_1:22606935-22606954 Msa0879770:CDS 45.0%
GCATCGTGACGCTGATAATT+GGG - chr6_1:22606936-22606955 Msa0879770:CDS 45.0%
CATCGTGACGCTGATAATTG+GGG - chr6_1:22606937-22606956 Msa0879770:CDS 45.0%
! GCTTCTGACATTTGGAGTGT+TGG - chr6_1:22607861-22607880 Msa0879770:intron 45.0%
ATATGGAAAAGAGCCAGCGT+AGG + chr6_1:22607939-22607958 None:intergenic 45.0%
CTATGAAGGTTCTTTGGACC+TGG - chr6_1:22608020-22608039 Msa0879770:intron 45.0%
! AGTACGCAACCTGCTGATTA+AGG - chr6_1:22608155-22608174 Msa0879770:intron 45.0%
AATGTTGGGACGTTTGTAGG+TGG - chr6_1:22608184-22608203 Msa0879770:intron 45.0%
TAGGTGGTTAGGTTCAGAGT+TGG - chr6_1:22608200-22608219 Msa0879770:intron 45.0%
! GGTTAGGTTCAGAGTTGGTT+AGG - chr6_1:22608205-22608224 Msa0879770:intron 45.0%
! TAGGTTCAGAGTTGGTTAGG+CGG - chr6_1:22608208-22608227 Msa0879770:intron 45.0%
!! AACTATGGGAGTACCCTGTT+GGG + chr6_1:22608364-22608383 None:intergenic 45.0%
!! TAACTATGGGAGTACCCTGT+TGG + chr6_1:22608365-22608384 None:intergenic 45.0%
! ACAGGGTACTCCCATAGTTA+AGG - chr6_1:22608365-22608384 Msa0879770:intron 45.0%
GTTGGGTACTCCCATAGTTA+AGG + chr6_1:22608416-22608435 None:intergenic 45.0%
!! GTTGCTGGTTTGCTCTCAAA+AGG + chr6_1:22608897-22608916 None:intergenic 45.0%
TGGTGATAGCCATAAACTGC+AGG - chr6_1:22608927-22608946 Msa0879770:intron 45.0%
CAACGTTTCCATGGTCTATG+AGG - chr6_1:22609320-22609339 Msa0879770:intron 45.0%
!! GTGGTTAGTTCTACGTCAAC+TGG - chr6_1:22610466-22610485 Msa0879770:five_prime_UTR 45.0%
AGTTCTACGTCAACTGGGAA+TGG - chr6_1:22610472-22610491 Msa0879770:five_prime_UTR 45.0%
!! TAAACTCCCAAAGAGTGCCT+AGG + chr6_1:22610580-22610599 None:intergenic 45.0%
! TAGGCACTCTTTGGGAGTTT+AGG - chr6_1:22610579-22610598 Msa0879770:five_prime_UTR 45.0%
! AGGCACTCTTTGGGAGTTTA+GGG - chr6_1:22610580-22610599 Msa0879770:five_prime_UTR 45.0%
! ACTCTTTGGGAGTTTAGGGA+AGG - chr6_1:22610584-22610603 Msa0879770:five_prime_UTR 45.0%
! CTCTTTGGGAGTTTAGGGAA+GGG - chr6_1:22610585-22610604 Msa0879770:five_prime_UTR 45.0%
! TCTTTGGGAGTTTAGGGAAG+GGG - chr6_1:22610586-22610605 Msa0879770:five_prime_UTR 45.0%
TATTGGCATAGGGTTGTGGA+GGG + chr6_1:22610701-22610720 None:intergenic 45.0%
! ACTGTATTGGCATAGGGTTG+TGG + chr6_1:22610705-22610724 None:intergenic 45.0%
ACAGTATTCAAAACCCGCCT+AGG - chr6_1:22610720-22610739 Msa0879770:intron 45.0%
TATTCAAAACCCGCCTAGGA+AGG - chr6_1:22610724-22610743 Msa0879770:intron 45.0%
AACCAATGTACCTTCCTAGG+CGG + chr6_1:22610737-22610756 None:intergenic 45.0%
AAACCAGATAGTTTCGCTGC+AGG - chr6_1:22611010-22611029 Msa0879770:intron 45.0%
! TAGTTTCGCTGCAGGACTTT+TGG - chr6_1:22611018-22611037 Msa0879770:intron 45.0%
CTGCAGGCATAGAAGAAGTA+AGG - chr6_1:22611068-22611087 Msa0879770:five_prime_UTR 45.0%
TATGTTCTTGGTGGAAGGAC+TGG - chr6_1:22611099-22611118 Msa0879770:five_prime_UTR 45.0%
CTGGAAGTGGGTGATAGAAA+TGG - chr6_1:22611118-22611137 Msa0879770:five_prime_UTR 45.0%
AAGTGGGTGATAGAAATGGG+TGG - chr6_1:22611122-22611141 Msa0879770:five_prime_UTR 45.0%
GAGAGCAGATGGATGAAATG+AGG - chr6_1:22611148-22611167 Msa0879770:five_prime_UTR 45.0%
AGCAGATGGATGAAATGAGG+TGG - chr6_1:22611151-22611170 Msa0879770:five_prime_UTR 45.0%
! AGTATCTTAGGGGGGTGTAT+TGG + chr6_1:22611888-22611907 None:intergenic 45.0%
GTTGCGATTGGAATTGACCT+TGG - chr6_1:22612287-22612306 Msa0879770:intron 45.0%
CTTACTCGTGTGTTGGAGTA+TGG - chr6_1:22612315-22612334 Msa0879770:five_prime_UTR 45.0%
AGCATCACCAATCAGCCTTT+GGG + chr6_1:22612423-22612442 None:intergenic 45.0%
! TGGTGATGCTGCCAAAAATC+AGG - chr6_1:22612433-22612452 Msa0879770:five_prime_UTR 45.0%
AACCCAACCAACACTGTCTT+TGG - chr6_1:22612464-22612483 Msa0879770:five_prime_UTR 45.0%
TCTACTGTTGTGGCCCTTTA+AGG - chr6_1:22612753-22612772 Msa0879770:intron 45.0%
!! TGGCCCTTTAAGGTCATTTC+CGG - chr6_1:22612763-22612782 Msa0879770:intron 45.0%
GCACCGGAAATGACCTTAAA+GGG + chr6_1:22612769-22612788 None:intergenic 45.0%
! AGCACCGGAAATGACCTTAA+AGG + chr6_1:22612770-22612789 None:intergenic 45.0%
TCTTGTGAACTACAAGGGTG+AGG - chr6_1:22612807-22612826 Msa0879770:intron 45.0%
TTTATCTTTGACCTTGGCGG+TGG - chr6_1:22613090-22613109 Msa0879770:intron 45.0%
TATCAAAGTCTTCACCGCCT+AGG + chr6_1:22613188-22613207 None:intergenic 45.0%
CACTTTGTGAAGGAGTTCAG+AGG - chr6_1:22613222-22613241 Msa0879770:intron 45.0%
! TCAACCTCCTCAAGGCTTTT+GGG + chr6_1:22613274-22613293 None:intergenic 45.0%
GTTGAGAACTTCCTGTGAGA+GGG - chr6_1:22613289-22613308 Msa0879770:intron 45.0%
GTCGATGATGTTGTCCTTGT+TGG - chr6_1:22613494-22613513 Msa0879770:intron 45.0%
GATGATGTTGTCCTTGTTGG+TGG - chr6_1:22613497-22613516 Msa0879770:intron 45.0%
!! TCCTTGTTGGTGGTTCTTCT+AGG - chr6_1:22613507-22613526 Msa0879770:intron 45.0%
TCCTAGAAGAACCACCAACA+AGG + chr6_1:22613511-22613530 None:intergenic 45.0%
!! GCAGGAGTTTTTCAAAGGGA+AGG - chr6_1:22613553-22613572 Msa0879770:intron 45.0%
!! CAAGAGCATTAACCCTGATG+AGG - chr6_1:22613583-22613602 Msa0879770:intron 45.0%
!! ACAGGAATGGAAGTGTTCCT+TGG + chr6_1:22613746-22613765 None:intergenic 45.0%
! GCTAGTGAGAACAACTTGCT+TGG - chr6_1:22613848-22613867 Msa0879770:five_prime_UTR 45.0%
CCTTGAAATTCTCAGCTTCC+TGG + chr6_1:22614054-22614073 None:intergenic 45.0%
CCAGGAAGCTGAGAATTTCA+AGG - chr6_1:22614051-22614070 Msa0879770:intron 45.0%
GATCAACTCAGCAATGACCA+AGG - chr6_1:22614201-22614220 Msa0879770:intron 45.0%
!! AAAAGAAAAAAAAATTATAA+TGG + chr6_1:22609594-22609613 None:intergenic 5.0%
!! TAAAGATATATTATATTATA+CGG + chr6_1:22611659-22611678 None:intergenic 5.0%
!! TGTTTTGTTCTCACGGCAGC+GGG + chr6_1:22604979-22604998 None:intergenic 50.0%
TCCCTTCTCTGTCTTAGAGG+AGG + chr6_1:22605505-22605524 None:intergenic 50.0%
TGGCCATCATGCCCAGTTAT+TGG - chr6_1:22606154-22606173 Msa0879770:CDS 50.0%
GGCCATCATGCCCAGTTATT+GGG - chr6_1:22606155-22606174 Msa0879770:CDS 50.0%
GACCCAATAACTGGGCATGA+TGG + chr6_1:22606160-22606179 None:intergenic 50.0%
TGCCCAGTTATTGGGTCTAG+AGG - chr6_1:22606163-22606182 Msa0879770:CDS 50.0%
TCAGCGTCACGATGCAATGA+TGG + chr6_1:22606931-22606950 None:intergenic 50.0%
!! TGTCGACTCCCAAGTCCAAA+TGG + chr6_1:22607042-22607061 None:intergenic 50.0%
CTTGGGAGTCGACATTGTCA+AGG - chr6_1:22607048-22607067 Msa0879770:CDS 50.0%
TGGGACGTTTGTAGGTGGTT+AGG - chr6_1:22608189-22608208 Msa0879770:intron 50.0%
AACAGAATTGGACGGGAGTG+AGG + chr6_1:22608293-22608312 None:intergenic 50.0%
AGCAAACCAGCAACCTCTTG+TGG - chr6_1:22608903-22608922 Msa0879770:intron 50.0%
AACCAGCAACCTCTTGTGGT+TGG - chr6_1:22608907-22608926 Msa0879770:intron 50.0%
TGGCTATCACCAACCACAAG+AGG + chr6_1:22608919-22608938 None:intergenic 50.0%
GGATGCTCACCTGCAGTTTA+TGG + chr6_1:22608939-22608958 None:intergenic 50.0%
TAAACTGCAGGTGAGCATCC+TGG - chr6_1:22608939-22608958 Msa0879770:intron 50.0%
AAACTGCAGGTGAGCATCCT+GGG - chr6_1:22608940-22608959 Msa0879770:intron 50.0%
TCCAAAGCCCGAACAGTTTG+TGG - chr6_1:22609042-22609061 Msa0879770:intron 50.0%
TCCACAAACTGTTCGGGCTT+TGG + chr6_1:22609046-22609065 None:intergenic 50.0%
CAGTTCAGCCCTTCTCAATC+AGG + chr6_1:22609635-22609654 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+CGG - chr6_1:22610105-22610124 Msa0879770:intron 50.0%
ACACGACACATGTCCGACAA+CGG - chr6_1:22610232-22610251 Msa0879770:intron 50.0%
ACGATCTCCTAGGCACTCTT+TGG - chr6_1:22610570-22610589 Msa0879770:five_prime_UTR 50.0%
CGATCTCCTAGGCACTCTTT+GGG - chr6_1:22610571-22610590 Msa0879770:five_prime_UTR 50.0%
! GTATTGGCATAGGGTTGTGG+AGG + chr6_1:22610702-22610721 None:intergenic 50.0%
ACCAATGTACCTTCCTAGGC+GGG + chr6_1:22610736-22610755 None:intergenic 50.0%
! GATTGGTGGGTCTGTTAGAG+TGG - chr6_1:22610971-22610990 Msa0879770:intron 50.0%
AGTCCTGCAGCGAAACTATC+TGG + chr6_1:22611016-22611035 None:intergenic 50.0%
TTGGTGGAAGGACTGGAAGT+GGG - chr6_1:22611106-22611125 Msa0879770:five_prime_UTR 50.0%
CAGCATCACCAATCAGCCTT+TGG + chr6_1:22612424-22612443 None:intergenic 50.0%
!! TGTCGGTTTGTCATCAGCAC+CGG + chr6_1:22612785-22612804 None:intergenic 50.0%
CAATCTCTCGCATCTGTGAG+AGG + chr6_1:22612870-22612889 None:intergenic 50.0%
ACAGATGCGAGAGATTGCAG+AGG - chr6_1:22612873-22612892 Msa0879770:intron 50.0%
CGAAGAGCGACTAAAGATGC+AGG - chr6_1:22612961-22612980 Msa0879770:intron 50.0%
TATGCTAGAGCAGCTGCAGT+TGG + chr6_1:22613027-22613046 None:intergenic 50.0%
ACTGCAGCTGCTCTAGCATA+TGG - chr6_1:22613027-22613046 Msa0879770:intron 50.0%
CATCAAAAGTTCCACCGCCA+AGG + chr6_1:22613104-22613123 None:intergenic 50.0%
TTTGATGTCAAGGCCACTGC+TGG - chr6_1:22613153-22613172 Msa0879770:intron 50.0%
! CTCAACCTCCTCAAGGCTTT+TGG + chr6_1:22613275-22613294 None:intergenic 50.0%
GGAAGTTCTCAACCTCCTCA+AGG + chr6_1:22613282-22613301 None:intergenic 50.0%
GGTTGAGAACTTCCTGTGAG+AGG - chr6_1:22613288-22613307 Msa0879770:intron 50.0%
CTTCCTGTGAGAGGGCAAAA+AGG - chr6_1:22613297-22613316 Msa0879770:intron 50.0%
! TGTCCTTTTTGCCCTCTCAC+AGG + chr6_1:22613303-22613322 None:intergenic 50.0%
CGTAAGCAACAGCCTCATCA+GGG + chr6_1:22613598-22613617 None:intergenic 50.0%
! CCTGATGAGGCTGTTGCTTA+CGG - chr6_1:22613596-22613615 Msa0879770:intron 50.0%
TGCTTACGGTGCAGCTATTC+AGG - chr6_1:22613610-22613629 Msa0879770:intron 50.0%
! ACTTTGAAAGGATGGCCTCG+AGG + chr6_1:22613902-22613921 None:intergenic 50.0%
TCTGCAGTGGAAGAAACCAG+TGG - chr6_1:22613959-22613978 Msa0879770:intron 50.0%
TGCTTCCTCGTGCATAACGT+TGG - chr6_1:22614390-22614409 Msa0879770:intron 50.0%
CAGATCCAACGTTATGCACG+AGG + chr6_1:22614398-22614417 None:intergenic 50.0%
CTCGTGCATAACGTTGGATC+TGG - chr6_1:22614396-22614415 Msa0879770:intron 50.0%
CACCAACCACAAGAGGTTGC+TGG + chr6_1:22608912-22608931 None:intergenic 55.0%
TAAGTCGGCGGCGTTAGATC+AGG - chr6_1:22609766-22609785 Msa0879770:intron 55.0%
!! TCAGTGTCGGTGTCGTGTCA+CGG - chr6_1:22610209-22610228 Msa0879770:intron 55.0%
CACGACACATGTCCGACAAC+GGG - chr6_1:22610233-22610252 Msa0879770:intron 55.0%
GATTAGGCGTGTCCCGTTGT+CGG + chr6_1:22610248-22610267 None:intergenic 55.0%
GACAACGGGACACGCCTAAT+CGG - chr6_1:22610247-22610266 Msa0879770:intron 55.0%
GCATGGACACTCCTCCGATT+AGG + chr6_1:22610264-22610283 None:intergenic 55.0%
! ACCCGCCTAGGAAGGTACAT+TGG - chr6_1:22610732-22610751 Msa0879770:intron 55.0%
CTTGGTGGAAGGACTGGAAG+TGG - chr6_1:22611105-22611124 Msa0879770:five_prime_UTR 55.0%
CACACGAGTAAGTCGTGCCA+AGG + chr6_1:22612307-22612326 None:intergenic 55.0%
GGCACGACTTACTCGTGTGT+TGG - chr6_1:22612308-22612327 Msa0879770:intron 55.0%
GCATGAGCAGAACGATCGTG+TGG - chr6_1:22612337-22612356 Msa0879770:five_prime_UTR 55.0%
TAGGTGAGTGTCTCCAGCAG+TGG + chr6_1:22613169-22613188 None:intergenic 55.0%
ACTGCTGGAGACACTCACCT+AGG - chr6_1:22613168-22613187 Msa0879770:intron 55.0%
GTGGGAACCCAAAAGCCTTG+AGG - chr6_1:22613264-22613283 Msa0879770:intron 55.0%
GGAACCCAAAAGCCTTGAGG+AGG - chr6_1:22613267-22613286 Msa0879770:intron 55.0%
CCGTAAGCAACAGCCTCATC+AGG + chr6_1:22613599-22613618 None:intergenic 55.0%
TCTCCCCCACCGAACCATCA+CGG - chr6_1:22604950-22604969 Msa0879770:three_prime_UTR 60.0%
!! ATGCCGTGATGGTTCGGTGG+GGG + chr6_1:22604956-22604975 None:intergenic 60.0%
!! GATGCCGTGATGGTTCGGTG+GGG + chr6_1:22604957-22604976 None:intergenic 60.0%
!! GGATGCCGTGATGGTTCGGT+GGG + chr6_1:22604958-22604977 None:intergenic 60.0%
AGCGGGATGCCGTGATGGTT+CGG + chr6_1:22604962-22604981 None:intergenic 60.0%
ACGGATACGGACACGGACAC+CGG - chr6_1:22610112-22610131 Msa0879770:intron 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + chr6_1:22610134-22610153 None:intergenic 60.0%
AACGGGACACGCCTAATCGG+AGG - chr6_1:22610250-22610269 Msa0879770:intron 60.0%
ATGGGTGGCACGAGAGCAGA+TGG - chr6_1:22611137-22611156 Msa0879770:five_prime_UTR 60.0%
GCTGGAGACACTCACCTAGG+CGG - chr6_1:22613171-22613190 Msa0879770:intron 60.0%
TCACTTCCTCTCGCACCTCG+AGG - chr6_1:22613884-22613903 Msa0879770:intron 60.0%
! GGGATGCCGTGATGGTTCGG+TGG + chr6_1:22604959-22604978 None:intergenic 65.0%
AGCCTGCAGTCGTGGTCTCC+AGG - chr6_1:22606836-22606855 Msa0879770:intron 65.0%
GCCTGCAGTCGTGGTCTCCA+GGG - chr6_1:22606837-22606856 Msa0879770:intron 65.0%
TCCCTGGAGACCACGACTGC+AGG + chr6_1:22606841-22606860 None:intergenic 65.0%
CACGGACACCGGACACGACA+CGG - chr6_1:22610123-22610142 Msa0879770:intron 65.0%
ACGGCAGCGGGATGCCGTGA+TGG + chr6_1:22604967-22604986 None:intergenic 70.0%
GGATGGCCTCGAGGTGCGAG+AGG + chr6_1:22613893-22613912 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 22604902 22614511 22604902 ID=Msa0879770;Name=Msa0879770
chr6_1 mRNA 22604902 22614511 22604902 ID=Msa0879770-mRNA-1;Parent=Msa0879770;Name=Msa0879770-mRNA-1;_AED=0.17;_eAED=0.17;_QI=1091|1|1|1|0.25|0.44|9|1227|267
chr6_1 exon 22604902 22606712 22604902 ID=Msa0879770-mRNA-1:exon:6222;Parent=Msa0879770-mRNA-1
chr6_1 exon 22606928 22607256 22606928 ID=Msa0879770-mRNA-1:exon:6221;Parent=Msa0879770-mRNA-1
chr6_1 exon 22610072 22610120 22610072 ID=Msa0879770-mRNA-1:exon:6220;Parent=Msa0879770-mRNA-1
chr6_1 exon 22610465 22610605 22610465 ID=Msa0879770-mRNA-1:exon:6219;Parent=Msa0879770-mRNA-1
chr6_1 exon 22611068 22611210 22611068 ID=Msa0879770-mRNA-1:exon:6218;Parent=Msa0879770-mRNA-1
chr6_1 exon 22611430 22611579 22611430 ID=Msa0879770-mRNA-1:exon:6217;Parent=Msa0879770-mRNA-1
chr6_1 exon 22612315 22612614 22612315 ID=Msa0879770-mRNA-1:exon:6216;Parent=Msa0879770-mRNA-1
chr6_1 exon 22613802 22613900 22613802 ID=Msa0879770-mRNA-1:exon:6215;Parent=Msa0879770-mRNA-1
chr6_1 exon 22614412 22614511 22614412 ID=Msa0879770-mRNA-1:exon:6214;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22614412 22614511 22614412 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22613802 22613900 22613802 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22612315 22612614 22612315 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22611430 22611579 22611430 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22611068 22611210 22611068 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22610465 22610605 22610465 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22610072 22610120 22610072 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 five_prime_UTR 22607148 22607256 22607148 ID=Msa0879770-mRNA-1:five_prime_utr;Parent=Msa0879770-mRNA-1
chr6_1 CDS 22606928 22607147 22606928 ID=Msa0879770-mRNA-1:cds;Parent=Msa0879770-mRNA-1
chr6_1 CDS 22606129 22606712 22606129 ID=Msa0879770-mRNA-1:cds;Parent=Msa0879770-mRNA-1
chr6_1 three_prime_UTR 22604902 22606128 22604902 ID=Msa0879770-mRNA-1:three_prime_utr;Parent=Msa0879770-mRNA-1
Gene Sequence

>Msa0879770

ATGGCAAACAAATATGAGGGAGTTGCGATTGGAATTGACCTTGGCACGACTTACTCGTGTGTTGGAGTATGGCATGAGCAGAACGATCGTGTGGAAATTATTCACAATGATCAAGGAAACAAAACAACACCTTCTTGTGTTGCTTTCACTAATTCCCAAAGGCTGATTGGTGATGCTGCCAAAAATCAGGCTTCTTCTAACCCAACCAACACTGTCTTTGATGCAAAGAGGTTAATTGGAAGGAAATATAGTGATTCCATTGTTCAGAATGATCTACTGTTGTGGCCCTTTAAGGTCATTTCCGGTGCTGATGACAAACCGACAATTCTTGTGAACTACAAGGGTGAGGAAAAGCACTTTGTTGCTGAAGAAATATCATCTGTGATCCTCTCACAGATGCGAGAGATTGCAGAGGCATTTTTGGAGTCACCTGTTAAGAATGCAGTAATTACCGTACCTGCTTATTTTAATGATTCACAACGAAGAGCGACTAAAGATGCAGGTGAAATTGCTGGTCTCAATGTAATGCGGATTATCAATGAACCAACTGCAGCTGCTCTAGCATATGGCCTTCAAAAGAGAGCTAATTGTGTTGATAAGAGAAATATTTTTATCTTTGACCTTGGCGGTGGAACTTTTGATGTGTCTATTCTTACAATTAAAAATAAGGTCTTTGATGTCAAGGCCACTGCTGGAGACACTCACCTAGGCGGTGAAGACTTTGATAACAGAATGGTGAATCACTTTGTGAAGGAGTTCAGAGGAAGAACAAAGAGGATATTAGTGGGAACCCAAAAGCCTTGA
Protein sequence

>Msa0879770

MANKYEGVAIGIDLGTTYSCVGVWHEQNDRVEIIHNDQGNKTTPSCVAFTNSQRLIGDAAKNQASSNPTNTVFDAKRLIGRKYSDSIVQNDLLLWPFKVISGADDKPTILVNYKGEEKHFVAEEISSVILSQMREIAEAFLESPVKNAVITVPAYFNDSQRRATKDAGEIAGLNVMRIINEPTAAALAYGLQKRANCVDKRNIFIFDLGGGTFDVSILTIKNKVFDVKATAGDTHLGGEDFDNRMVNHFVKEFRGRTKRILVGTQKP*