AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0970400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970400 MtrunA17_Chr6g0449401 91.351 659 19 2 1 621 13 671 0.0 1209
Msa0970400 MtrunA17_Chr7g0227331 68.858 639 160 14 1 625 1 614 0.0 818
Msa0970400 MtrunA17_Chr2g0290691 72.210 457 118 3 159 607 113 568 0.0 695
Msa0970400 MtrunA17_Chr7g0250631 63.768 483 161 6 148 618 255 735 0.0 618
Msa0970400 MtrunA17_Chr8g0335351 66.667 462 142 6 148 599 261 720 0.0 610
Msa0970400 MtrunA17_Chr1g0179101 64.165 413 140 4 192 600 413 821 0.0 544
Msa0970400 MtrunA17_Chr7g0266031 59.436 461 174 6 148 600 388 843 0.0 544
Msa0970400 MtrunA17_Chr8g0356291 61.962 418 149 6 189 600 65 478 1.20e-177 514
Msa0970400 MtrunA17_Chr3g0080101 58.613 447 163 7 163 601 337 769 1.59e-177 524
Msa0970400 MtrunA17_Chr2g0309421 61.940 402 142 5 204 600 131 526 8.54e-176 511
Msa0970400 MtrunA17_Chr4g0063311 53.623 414 165 7 221 615 62 467 2.45e-146 433
Msa0970400 MtrunA17_Chr2g0321101 52.987 385 145 7 229 593 66 434 4.32e-128 385
Msa0970400 MtrunA17_Chr2g0285711 47.826 414 183 6 200 600 32 425 7.18e-122 369
Msa0970400 MtrunA17_Chr8g0381091 47.805 410 182 6 225 620 52 443 1.51e-120 366
Msa0970400 MtrunA17_Chr2g0312641 43.269 416 193 11 198 599 33 419 2.74e-111 343
Msa0970400 MtrunA17_Chr4g0030361 46.667 375 153 4 225 599 282 609 5.30e-109 342
Msa0970400 MtrunA17_Chr8g0369091 45.153 392 169 3 225 614 572 919 8.14e-108 347
Msa0970400 MtrunA17_Chr2g0327561 47.467 375 161 2 225 599 601 939 5.51e-106 343
Msa0970400 MtrunA17_Chr8g0338741 39.474 380 171 12 247 600 15 361 6.93e-78 254
Msa0970400 MtrunA17_Chr2g0329011 37.250 400 192 9 247 639 12 359 1.64e-74 244
Msa0970400 MtrunA17_Chr4g0032761 36.828 372 205 8 247 600 10 369 2.66e-72 239
Msa0970400 MtrunA17_Chr7g0234641 34.656 378 220 7 247 615 8 367 1.99e-67 226
Msa0970400 MtrunA17_Chr4g0018201 35.000 360 181 7 252 610 759 1066 1.02e-57 211
Msa0970400 MtrunA17_Chr5g0428981 34.722 360 182 7 252 610 763 1070 1.74e-57 210
Msa0970400 MtrunA17_Chr6g0478601 33.994 353 189 8 249 600 108 417 5.79e-56 198
Msa0970400 MtrunA17_Chr3g0135951 31.387 411 233 13 185 588 38 406 9.94e-50 181
Msa0970400 MtrunA17_Chr1g0153321 30.556 360 207 8 238 591 94 416 5.58e-48 176
Msa0970400 MtrunA17_Chr2g0299781 28.111 434 268 10 161 588 30 425 1.37e-46 172
Msa0970400 MtrunA17_Chr1g0187581 31.755 359 194 10 252 599 117 435 3.61e-46 171
Msa0970400 MtrunA17_Chr1g0167351 31.148 366 208 10 243 599 99 429 1.88e-45 169
Msa0970400 MtrunA17_Chr1g0167311 30.729 384 223 12 225 601 85 432 3.26e-45 168
Msa0970400 MtrunA17_Chr1g0183651 30.518 367 211 9 240 599 108 437 5.75e-45 168
Msa0970400 MtrunA17_Chr7g0261491 29.469 414 234 13 197 599 75 441 4.74e-43 163
Msa0970400 MtrunA17_Chr7g0245031 39.865 148 87 1 252 399 148 293 5.31e-27 115
Msa0970400 MtrunA17_Chr7g0245031 43.363 113 61 2 477 588 299 409 1.13e-20 95.5
Msa0970400 MtrunA17_Chr4g0059751 37.580 157 85 3 252 399 89 241 4.34e-26 111
Msa0970400 MtrunA17_Chr4g0059751 37.288 118 71 2 477 593 247 362 7.52e-21 95.5
Msa0970400 MtrunA17_Chr1g0197721 32.796 186 122 2 239 424 38 220 4.90e-24 106
Msa0970400 MtrunA17_Chr1g0197721 33.577 137 85 3 464 599 203 334 1.46e-11 67.4
Msa0970400 MtrunA17_Chr3g0140631 34.286 175 108 2 249 418 34 206 2.32e-21 95.1
Msa0970400 MtrunA17_Chr3g0140631 35.185 108 66 1 476 583 185 288 3.22e-15 77.0
Msa0970400 MtrunA17_Chr8g0351491 26.239 343 173 8 241 583 5 267 2.97e-21 94.4
Msa0970400 MtrunA17_Chr3g0125381 40.541 111 62 1 473 583 100 206 1.55e-20 90.5
Msa0970400 MtrunA17_Chr3g0125381 29.775 178 109 6 302 468 2 174 5.27e-11 62.8
Msa0970400 MtrunA17_Chr3g0132591 26.748 329 152 8 258 583 118 360 1.39e-19 92.0
Msa0970400 MtrunA17_Chr2g0286501 35.948 153 90 3 249 401 46 190 4.69e-18 89.0
Msa0970400 MtrunA17_Chr3g0114511 29.897 194 121 4 244 428 24 211 6.52e-18 87.0
Msa0970400 MtrunA17_Chr7g0244521 25.073 343 174 11 244 583 4 266 7.18e-18 87.0
Msa0970400 MtrunA17_Chr4g0013131 22.980 396 204 15 243 633 3 302 9.98e-18 86.3
Msa0970400 MtrunA17_Chr3g0107051 35.099 151 95 2 249 399 18 165 1.34e-17 85.9
Msa0970400 MtrunA17_Chr8g0353621 31.285 179 116 2 252 425 10 186 1.83e-17 83.2
Msa0970400 MtrunA17_Chr8g0353621 40.196 102 57 1 482 583 164 261 9.32e-16 78.2
Msa0970400 MtrunA17_Chr8g0379091 32.680 153 100 1 247 399 21 170 2.19e-17 85.5
Msa0970400 MtrunA17_Chr6g0453681 24.850 334 172 9 251 584 18 272 2.63e-17 85.5
Msa0970400 MtrunA17_Chr1g0188031 32.704 159 91 4 249 399 17 167 3.64e-17 84.3
Msa0970400 MtrunA17_Chr2g0284031 32.026 153 101 1 247 399 26 175 3.89e-17 84.7
Msa0970400 MtrunA17_Chr6g0468751 24.925 333 171 9 251 583 18 271 3.98e-17 84.7
Msa0970400 MtrunA17_Chr1g0205421 32.704 159 100 3 243 399 3 156 4.38e-17 84.3
Msa0970400 MtrunA17_Chr3g0132671 24.793 363 164 11 251 583 18 301 4.49e-17 84.7
Msa0970400 MtrunA17_Chr2g0302431 30.864 162 110 2 238 399 6 165 1.00e-16 83.2
Msa0970400 MtrunA17_Chr5g0432491 34.437 151 97 2 249 399 20 168 1.43e-16 82.8
Msa0970400 MtrunA17_Chr8g0346071 23.631 347 180 12 238 583 8 270 2.22e-16 82.0
Msa0970400 MtrunA17_Chr2g0321841 28.655 171 113 5 249 413 1 168 2.70e-16 83.2
Msa0970400 MtrunA17_Chr2g0284011 25.000 304 151 8 244 544 4 233 3.07e-16 81.6
Msa0970400 MtrunA17_Chr4g0074111 24.188 277 135 7 250 524 16 219 4.02e-16 80.9
Msa0970400 MtrunA17_Chr4g0025671 28.387 155 105 3 248 399 4 155 5.13e-16 82.4
Msa0970400 MtrunA17_Chr3g0107011 29.801 151 103 1 249 399 11 158 9.09e-16 80.5
Msa0970400 MtrunA17_Chr1g0190831 28.387 155 103 3 249 399 1 151 9.11e-16 80.9
Msa0970400 MtrunA17_Chr5g0428031 29.605 152 105 2 248 399 5 154 1.21e-15 79.7
Msa0970400 MtrunA17_Chr4g0063881 30.263 152 104 1 248 399 7 156 1.62e-15 79.3
Msa0970400 MtrunA17_Chr2g0330211 23.416 363 205 11 247 595 13 316 2.22e-15 79.3
Msa0970400 MtrunA17_Chr7g0258051 25.581 172 119 4 248 413 12 180 3.69e-15 79.0
Msa0970400 MtrunA17_Chr1g0173921 28.571 154 104 3 249 399 1 151 4.24e-15 79.3
Msa0970400 MtrunA17_Chr5g0432471 22.324 327 169 10 249 569 9 256 6.27e-15 77.8
Msa0970400 MtrunA17_Chr7g0272841 30.688 189 114 6 252 432 68 247 1.52e-14 77.0
Msa0970400 MtrunA17_Chr2g0304111 29.560 159 105 3 241 399 17 168 2.40e-14 75.9
Msa0970400 MtrunA17_Chr8g0385341 33.333 153 96 4 252 400 30 180 2.81e-14 75.9
Msa0970400 MtrunA17_Chr6g0486661 35.433 127 72 5 479 599 912 1034 3.46e-14 76.3
Msa0970400 MtrunA17_Chr1g0185221 26.316 171 117 4 249 413 1 168 6.20e-14 75.1
Msa0970400 MtrunA17_Chr7g0274941 30.323 155 103 3 244 396 8 159 7.03e-14 72.8
Msa0970400 MtrunA17_Chr7g0274941 35.922 103 59 3 484 583 176 274 8.16e-11 63.5
Msa0970400 MtrunA17_Chr5g0441011 30.864 162 101 5 240 399 6 158 7.07e-14 74.3
Msa0970400 MtrunA17_Chr3g0091311 30.128 156 106 2 244 399 4 156 7.90e-14 72.0
Msa0970400 MtrunA17_Chr7g0260191 26.623 154 107 3 249 399 1 151 1.07e-13 74.3
Msa0970400 MtrunA17_Chr5g0419441 28.947 152 105 2 252 403 239 387 1.09e-13 74.7
Msa0970400 MtrunA17_Chr2g0333821 22.823 333 180 9 252 584 14 269 1.15e-13 73.6
Msa0970400 MtrunA17_Chr1g0200601 31.818 154 99 4 251 400 29 180 1.43e-13 73.6
Msa0970400 MtrunA17_Chr1g0205931 29.018 224 126 9 240 449 53 257 1.74e-13 73.6
Msa0970400 MtrunA17_Chr1g0166101 30.380 158 95 3 249 399 21 170 1.77e-13 72.8
Msa0970400 MtrunA17_Chr1g0202831 28.402 169 111 3 240 403 399 562 1.84e-13 73.9
Msa0970400 MtrunA17_Chr5g0409421 26.176 340 193 12 249 585 1 285 1.87e-13 73.2
Msa0970400 MtrunA17_Chr1g0170551 33.019 106 65 2 482 587 162 261 1.95e-13 73.9
Msa0970400 MtrunA17_Chr1g0170551 29.375 160 109 3 252 411 7 162 4.86e-12 69.7
Msa0970400 MtrunA17_Chr4g0001331 30.921 152 97 3 248 399 21 164 2.16e-13 72.8
Msa0970400 MtrunA17_Chr1g0150321 31.126 151 101 2 249 399 10 157 2.58e-13 72.4
Msa0970400 MtrunA17_Chr2g0317001 27.632 152 106 2 252 403 15 162 2.74e-13 73.2
Msa0970400 MtrunA17_Chr7g0256001 30.435 184 113 6 251 427 140 315 2.74e-13 73.2
Msa0970400 MtrunA17_Chr8g0346081 28.302 159 107 3 241 399 11 162 4.49e-13 71.6
Msa0970400 MtrunA17_Chr8g0339221 26.667 390 215 17 249 629 1 328 6.20e-13 71.2
Msa0970400 MtrunA17_Chr1g0176421 30.337 178 115 5 252 427 161 331 7.20e-13 71.6
Msa0970400 MtrunA17_Chr3g0130151 30.675 163 107 5 250 409 242 401 7.39e-13 71.6
Msa0970400 MtrunA17_Chr8g0345801 32.374 139 87 4 249 385 12 145 7.56e-13 69.3
Msa0970400 MtrunA17_Chr1g0170281 31.677 161 100 5 248 400 110 268 1.22e-12 70.9
Msa0970400 MtrunA17_Chr3g0091281 25.442 283 133 9 244 523 4 211 1.64e-12 67.8
Msa0970400 MtrunA17_Chr1g0203881 30.622 209 133 6 256 455 45 250 1.83e-12 70.1
Msa0970400 MtrunA17_Chr5g0448721 28.415 183 122 5 252 432 96 271 2.14e-12 70.1
Msa0970400 MtrunA17_Chr8g0374701 29.697 165 102 5 267 427 148 302 4.00e-12 69.3
Msa0970400 MtrunA17_Chr2g0317501 31.579 171 108 6 234 399 114 280 4.74e-12 69.3
Msa0970400 MtrunA17_Chr3g0133541 31.579 152 101 2 250 399 305 455 4.98e-12 69.3
Msa0970400 MtrunA17_Chr4g0008561 27.273 176 111 6 415 584 113 277 5.32e-12 68.9
Msa0970400 MtrunA17_Chr8g0384301 26.882 186 123 5 249 431 296 471 5.34e-12 68.9
Msa0970400 MtrunA17_Chr5g0441691 29.444 180 114 5 252 427 68 238 9.00e-12 68.2
Msa0970400 MtrunA17_Chr1g0173541 32.051 156 100 4 249 400 49 202 9.92e-12 67.8
Msa0970400 MtrunA17_Chr4g0047191 30.693 101 70 0 299 399 94 194 1.88e-11 66.2
Msa0970400 MtrunA17_Chr4g0047211 30.693 101 70 0 299 399 89 189 2.28e-11 65.9
Msa0970400 MtrunA17_Chr0c02g0489761 29.444 180 114 5 252 427 78 248 2.44e-11 66.6
Msa0970400 MtrunA17_Chr1g0201571 32.026 153 93 6 252 399 126 272 2.64e-11 66.6
Msa0970400 MtrunA17_Chr4g0074811 32.680 153 97 5 252 400 91 241 2.73e-11 66.6
Msa0970400 MtrunA17_Chr3g0129721 32.051 156 93 6 251 399 23 172 2.74e-11 65.1
Msa0970400 MtrunA17_Chr4g0045261 29.412 153 96 4 279 427 167 311 3.18e-11 66.2
Msa0970400 MtrunA17_Chr5g0444171 30.065 153 101 4 252 400 92 242 3.31e-11 66.2
Msa0970400 MtrunA17_Chr7g0257751 31.373 153 99 4 252 400 58 208 3.89e-11 65.9
Msa0970400 MtrunA17_Chr3g0091421 30.573 157 102 4 245 399 5 156 4.48e-11 63.5
Msa0970400 MtrunA17_Chr7g0252301 29.814 161 106 3 250 407 853 1009 4.52e-11 66.2
Msa0970400 MtrunA17_Chr5g0402551 27.660 188 121 6 252 432 134 313 8.40e-11 65.1
Msa0970400 MtrunA17_Chr3g0131181 30.719 153 100 4 252 400 29 179 8.71e-11 64.7
Msa0970400 MtrunA17_Chr5g0405421 26.519 181 120 5 252 427 99 271 9.29e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970400 AT5G47750.1 70.253 474 124 5 159 617 98 569 0.0 675
Msa0970400 AT4G26610.1 72.210 457 120 5 148 601 22 474 0.0 664
Msa0970400 AT5G55910.2 70.450 467 127 5 151 611 13 474 0.0 652
Msa0970400 AT5G55910.1 70.450 467 127 5 151 611 13 474 0.0 652
Msa0970400 AT3G27580.2 69.895 475 120 6 140 606 80 539 0.0 647
Msa0970400 AT3G27580.1 69.895 475 120 6 140 606 80 539 0.0 647
Msa0970400 AT2G44830.2 65.463 443 141 8 192 628 303 739 0.0 584
Msa0970400 AT2G44830.3 65.463 443 141 8 192 628 303 739 0.0 584
Msa0970400 AT2G44830.1 65.463 443 141 8 192 628 303 739 0.0 584
Msa0970400 AT5G40030.1 66.667 384 113 6 225 601 86 461 0.0 538
Msa0970400 AT1G79250.1 66.142 381 122 3 225 600 119 497 1.12e-180 524
Msa0970400 AT1G79250.3 66.142 381 122 3 225 600 119 497 1.12e-180 524
Msa0970400 AT1G79250.2 66.142 381 122 3 225 600 119 497 1.12e-180 524
Msa0970400 AT1G79250.4 66.142 381 122 3 225 600 119 497 1.12e-180 524
Msa0970400 AT3G52890.2 61.190 420 150 4 192 600 479 896 2.47e-178 531
Msa0970400 AT3G52890.4 61.190 420 150 4 192 600 479 896 2.47e-178 531
Msa0970400 AT3G52890.1 61.190 420 150 4 192 600 479 896 2.47e-178 531
Msa0970400 AT3G52890.3 61.190 420 150 4 192 600 479 896 2.47e-178 531
Msa0970400 AT3G12690.1 62.595 393 140 2 208 600 141 526 9.97e-177 514
Msa0970400 AT3G12690.3 62.595 393 140 2 208 600 141 526 9.97e-177 514
Msa0970400 AT3G12690.2 62.595 393 140 2 208 600 141 526 9.97e-177 514
Msa0970400 AT5G03640.2 58.508 429 161 5 183 600 473 895 8.26e-175 521
Msa0970400 AT5G03640.1 58.508 429 161 5 183 600 473 895 8.26e-175 521
Msa0970400 AT1G16440.1 65.079 378 120 4 225 600 86 453 2.70e-174 505
Msa0970400 AT2G36350.1 60.382 419 153 5 192 600 500 915 4.60e-170 510
Msa0970400 AT2G26700.1 46.767 464 190 8 194 602 23 484 4.08e-133 401
Msa0970400 AT3G44610.1 54.795 365 130 8 252 593 71 423 9.58e-128 384
Msa0970400 AT2G34650.1 48.284 408 179 9 225 622 50 435 1.88e-123 373
Msa0970400 AT5G58140.6 43.796 411 185 4 226 636 551 915 2.50e-109 350
Msa0970400 AT5G58140.7 43.796 411 185 4 226 636 551 915 2.50e-109 350
Msa0970400 AT5G58140.5 43.796 411 185 4 226 636 551 915 2.50e-109 350
Msa0970400 AT5G58140.2 43.796 411 185 4 226 636 551 915 2.50e-109 350
Msa0970400 AT5G58140.1 43.796 411 185 4 226 636 551 915 2.50e-109 350
Msa0970400 AT5G58140.3 47.139 367 150 3 226 592 551 873 4.08e-107 344
Msa0970400 AT3G14370.1 43.846 390 180 6 227 607 61 420 1.50e-105 328
Msa0970400 AT3G45780.2 45.867 375 161 3 225 599 636 968 1.40e-98 324
Msa0970400 AT3G45780.1 45.867 375 161 3 225 599 636 968 1.40e-98 324
Msa0970400 AT1G53700.1 40.695 403 197 6 227 619 66 436 2.04e-97 307
Msa0970400 AT3G20830.1 39.071 366 191 9 246 600 15 359 1.21e-70 234
Msa0970400 AT1G51170.1 37.978 366 191 10 247 600 17 358 2.22e-70 234
Msa0970400 AT3G25250.1 33.871 372 192 8 247 600 12 347 6.63e-66 223
Msa0970400 AT4G13000.1 34.986 363 190 9 247 600 15 340 8.26e-66 221
Msa0970400 AT1G45160.2 35.393 356 179 8 247 598 665 973 1.05e-52 196
Msa0970400 AT5G62310.1 33.884 363 182 10 252 610 754 1062 1.40e-52 196
Msa0970400 AT1G45160.1 35.393 356 179 8 247 598 665 973 1.48e-52 195
Msa0970400 AT1G48490.3 33.528 343 178 7 247 588 823 1116 4.55e-51 191
Msa0970400 AT1G48490.2 33.528 343 178 7 247 588 823 1116 4.55e-51 191
Msa0970400 AT1G48490.1 33.528 343 178 7 247 588 823 1116 4.55e-51 191
Msa0970400 AT1G48490.4 33.528 343 178 7 247 588 824 1117 4.59e-51 191
Msa0970400 AT3G17850.1 34.018 341 181 8 249 588 879 1176 1.27e-50 190
Msa0970400 AT5G09890.2 31.161 353 206 8 240 588 90 409 6.98e-49 179
Msa0970400 AT5G09890.1 31.161 353 206 8 240 588 90 409 8.04e-49 179
Msa0970400 AT1G30640.3 30.081 369 222 10 237 601 12 348 8.64e-49 177
Msa0970400 AT1G30640.2 30.081 369 222 8 237 601 105 441 1.56e-48 179
Msa0970400 AT1G30640.1 30.081 369 222 8 237 601 105 441 1.56e-48 179
Msa0970400 AT4G33080.2 30.688 378 224 10 231 599 73 421 4.53e-48 176
Msa0970400 AT4G33080.1 30.688 378 224 10 231 599 73 421 4.99e-48 176
Msa0970400 AT2G20470.3 30.790 367 208 9 240 600 112 438 6.17e-45 168
Msa0970400 AT4G14350.3 28.434 415 239 11 195 601 72 436 7.99e-45 168
Msa0970400 AT4G14350.2 28.434 415 239 11 195 601 72 436 9.31e-45 168
Msa0970400 AT4G14350.1 28.434 415 239 11 195 601 72 436 9.31e-45 168
Msa0970400 AT4G14350.4 28.434 415 239 11 195 601 72 436 9.31e-45 168
Msa0970400 AT2G20470.2 30.790 367 208 9 240 600 112 438 1.01e-44 168
Msa0970400 AT2G20470.1 30.790 367 208 9 240 600 112 438 1.01e-44 168
Msa0970400 AT3G23310.1 30.411 365 210 8 231 588 99 426 4.41e-44 166
Msa0970400 AT1G03920.1 30.024 413 233 11 195 599 90 454 1.32e-43 165
Msa0970400 AT1G03920.3 30.024 413 233 11 195 599 90 454 1.32e-43 165
Msa0970400 AT1G03920.2 32.022 356 196 9 252 599 24 341 3.43e-43 162
Msa0970400 AT2G19400.1 29.235 366 221 9 231 588 84 419 1.55e-41 158
Msa0970400 AT5G58140.4 48.855 131 67 0 226 356 551 681 2.51e-33 136
Msa0970400 AT5G04510.1 28.940 349 182 12 252 599 44 327 3.72e-31 127
Msa0970400 AT3G10540.1 28.080 349 185 12 252 599 45 328 7.14e-29 121
Msa0970400 AT3G08730.1 30.224 268 147 6 132 399 52 279 4.88e-28 118
Msa0970400 AT3G08730.1 45.133 113 58 3 477 588 285 394 5.73e-24 105
Msa0970400 AT3G08730.2 30.224 268 147 6 132 399 52 279 4.88e-28 118
Msa0970400 AT3G08730.2 45.133 113 58 3 477 588 285 394 5.73e-24 105
Msa0970400 AT3G08720.1 38.710 155 93 1 245 399 133 285 9.25e-28 117
Msa0970400 AT3G08720.1 45.133 113 58 3 477 588 291 400 9.16e-24 105
Msa0970400 AT3G08720.3 38.710 155 93 1 245 399 133 285 9.25e-28 117
Msa0970400 AT3G08720.3 45.133 113 58 3 477 588 291 400 9.16e-24 105
Msa0970400 AT3G08720.4 38.710 155 93 1 245 399 133 285 9.25e-28 117
Msa0970400 AT3G08720.4 45.133 113 58 3 477 588 291 400 9.16e-24 105
Msa0970400 AT3G08720.2 38.710 155 93 1 245 399 133 285 9.25e-28 117
Msa0970400 AT3G08720.2 45.133 113 58 3 477 588 291 400 9.16e-24 105
Msa0970400 AT5G04510.3 34.054 185 118 4 252 436 44 224 8.33e-25 105
Msa0970400 AT5G04510.2 34.054 185 118 4 252 436 44 224 8.64e-25 107
Msa0970400 AT5G04510.2 34.307 137 84 3 464 599 196 327 2.17e-17 85.5
Msa0970400 AT2G25090.1 26.190 336 174 10 252 584 15 279 1.37e-22 102
Msa0970400 AT5G18700.1 37.748 151 86 3 249 399 1 143 1.10e-20 97.8
Msa0970400 AT5G57630.2 26.241 282 128 6 245 523 5 209 3.29e-20 94.0
Msa0970400 AT5G57630.1 26.241 282 128 6 245 523 5 209 4.07e-20 93.6
Msa0970400 AT5G25110.1 25.706 354 180 11 235 587 31 302 1.69e-19 92.4
Msa0970400 AT2G25880.4 32.804 189 120 2 235 418 21 207 2.06e-19 89.7
Msa0970400 AT2G25880.4 37.963 108 63 1 476 583 186 289 6.19e-16 79.3
Msa0970400 AT2G45490.2 28.571 231 154 6 244 467 14 240 2.26e-19 88.6
Msa0970400 AT2G45490.2 38.824 85 52 0 476 560 170 254 6.00e-13 69.7
Msa0970400 AT2G25880.1 32.804 189 120 2 235 418 8 194 2.46e-19 89.4
Msa0970400 AT2G25880.1 37.963 108 63 1 476 583 173 276 6.19e-16 79.3
Msa0970400 AT4G32830.1 33.714 175 109 2 249 418 28 200 2.61e-19 89.4
Msa0970400 AT4G32830.1 33.333 126 73 2 476 601 179 293 2.71e-15 77.4
Msa0970400 AT2G45490.1 27.170 265 172 8 244 491 14 274 3.64e-19 89.0
Msa0970400 AT2G45490.1 37.097 124 67 2 476 599 170 282 1.53e-18 87.0
Msa0970400 AT2G25880.3 32.804 189 120 2 235 418 69 255 3.91e-19 89.7
Msa0970400 AT2G25880.3 37.963 108 63 1 476 583 234 337 1.94e-15 78.6
Msa0970400 AT3G01090.3 24.850 334 172 9 251 584 18 272 5.74e-19 90.9
Msa0970400 AT3G01090.1 24.850 334 172 9 251 584 18 272 5.74e-19 90.9
Msa0970400 AT3G01090.2 24.850 334 172 9 251 584 41 295 6.26e-19 90.9
Msa0970400 AT3G61960.1 24.620 329 167 11 249 571 7 260 4.42e-18 88.6
Msa0970400 AT1G12680.1 34.194 155 90 5 256 408 111 255 4.72e-18 87.8
Msa0970400 AT3G61960.2 24.620 329 167 11 249 571 7 260 4.95e-18 88.6
Msa0970400 AT5G10930.1 25.776 322 163 9 250 569 10 257 8.35e-18 87.0
Msa0970400 AT2G30360.1 26.254 339 167 10 249 583 18 277 9.62e-18 86.7
Msa0970400 AT3G29160.3 23.433 367 201 10 251 617 19 305 2.33e-17 84.7
Msa0970400 AT2G20050.2 37.931 116 66 3 479 591 931 1043 2.58e-17 87.0
Msa0970400 AT2G20050.1 37.931 116 66 3 479 591 934 1046 2.63e-17 87.0
Msa0970400 AT4G18700.1 32.026 153 101 1 247 399 21 170 4.12e-17 85.1
Msa0970400 AT3G17510.1 33.333 159 103 3 241 399 10 165 6.45e-17 84.3
Msa0970400 AT3G29160.1 23.433 367 201 10 251 617 19 305 6.56e-17 84.7
Msa0970400 AT3G29160.2 23.433 367 201 10 251 617 19 305 6.56e-17 84.7
Msa0970400 AT5G45810.1 30.719 153 103 1 247 399 23 172 1.09e-16 83.6
Msa0970400 AT4G24400.1 29.070 172 116 3 248 415 5 174 1.45e-16 83.2
Msa0970400 AT2G34180.1 26.224 286 134 9 241 523 46 257 1.78e-16 83.2
Msa0970400 AT4G24400.2 29.070 172 116 3 248 415 5 174 1.82e-16 82.4
Msa0970400 AT2G38490.1 37.255 153 87 4 250 399 26 172 2.91e-16 82.0
Msa0970400 AT5G45820.1 30.573 157 106 2 243 399 3 156 2.97e-16 82.0
Msa0970400 AT2G25880.2 37.963 108 63 1 476 583 141 244 4.69e-16 79.0
Msa0970400 AT5G28290.3 29.870 154 102 3 249 399 1 151 1.12e-15 80.9
Msa0970400 AT5G28290.1 29.870 154 102 3 249 399 1 151 1.21e-15 80.9
Msa0970400 AT5G28290.2 29.870 154 102 3 249 399 1 151 1.21e-15 80.9
Msa0970400 AT1G29230.1 30.719 153 99 2 249 399 71 218 1.31e-15 80.5
Msa0970400 AT4G14580.1 24.695 328 170 11 245 569 14 267 1.42e-15 79.7
Msa0970400 AT3G04810.2 25.980 204 129 5 249 433 1 201 1.56e-15 80.5
Msa0970400 AT3G04810.1 25.980 204 129 5 249 433 1 201 1.56e-15 80.5
Msa0970400 AT3G04810.3 25.980 204 129 5 249 433 1 201 1.56e-15 80.5
Msa0970400 AT3G44200.2 27.485 171 115 5 249 413 5 172 1.86e-15 80.9
Msa0970400 AT3G44200.1 27.485 171 115 5 249 413 5 172 1.86e-15 80.9
Msa0970400 AT3G20860.1 24.405 168 123 2 249 413 1 167 2.70e-15 79.0
Msa0970400 AT5G21326.1 32.680 153 97 4 249 399 10 158 4.72e-15 78.6
Msa0970400 AT1G54510.4 27.922 154 105 3 249 399 1 151 6.14e-15 78.6
Msa0970400 AT1G54510.2 27.922 154 105 3 249 399 1 151 6.14e-15 78.6
Msa0970400 AT1G54510.1 27.922 154 105 3 249 399 1 151 6.14e-15 78.6
Msa0970400 AT1G54510.3 27.922 154 105 3 249 399 1 151 6.14e-15 78.6
Msa0970400 AT5G58380.1 21.557 334 183 8 252 584 12 267 7.08e-15 78.2
Msa0970400 AT3G63280.2 28.571 154 104 3 249 399 1 151 7.24e-15 78.2
Msa0970400 AT3G63280.3 28.571 154 104 3 249 399 1 151 7.24e-15 78.2
Msa0970400 AT3G63280.1 28.571 154 104 3 249 399 1 151 7.24e-15 78.2
Msa0970400 AT3G63280.4 28.025 157 107 3 246 399 52 205 7.66e-15 78.6
Msa0970400 AT2G26980.2 31.098 164 102 5 238 399 5 159 1.07e-14 75.1
Msa0970400 AT5G01810.3 33.333 159 99 4 243 399 3 156 1.13e-14 76.6
Msa0970400 AT3G06030.1 29.126 206 123 6 233 432 59 247 1.16e-14 77.8
Msa0970400 AT5G35410.2 29.221 154 107 2 246 399 5 156 1.19e-14 76.6
Msa0970400 AT5G01810.1 33.333 159 99 4 243 399 3 156 1.34e-14 77.0
Msa0970400 AT5G01810.2 33.333 159 99 4 243 399 3 156 1.34e-14 77.0
Msa0970400 AT2G26980.1 31.098 164 102 5 238 399 5 159 1.41e-14 76.3
Msa0970400 AT2G26980.3 31.098 164 102 5 238 399 5 159 1.56e-14 76.6
Msa0970400 AT1G54960.1 32.530 166 93 6 240 399 66 218 1.70e-14 77.4
Msa0970400 AT1G54960.2 32.530 166 93 6 240 399 66 218 1.70e-14 77.4
Msa0970400 AT1G35670.1 31.818 154 99 4 251 400 25 176 1.73e-14 77.0
Msa0970400 AT2G26980.4 31.098 164 102 5 238 399 15 169 1.79e-14 76.6
Msa0970400 AT5G01820.1 35.849 159 94 5 243 399 14 166 2.06e-14 76.3
Msa0970400 AT2G26980.5 31.098 164 102 5 238 399 5 159 2.88e-14 75.9
Msa0970400 AT5G35410.1 29.221 154 107 2 246 399 5 156 3.26e-14 75.9
Msa0970400 AT5G39440.1 33.557 149 97 2 251 399 18 164 4.01e-14 75.9
Msa0970400 AT1G69220.1 30.323 155 99 3 252 403 249 397 4.62e-14 76.3
Msa0970400 AT1G01140.3 29.341 167 111 3 233 399 5 164 4.93e-14 75.1
Msa0970400 AT1G01140.1 29.341 167 111 3 233 399 5 164 5.43e-14 75.1
Msa0970400 AT1G01140.2 29.341 167 111 3 233 399 5 164 5.48e-14 75.1
Msa0970400 AT1G09000.2 28.774 212 130 8 252 450 69 272 6.51e-14 75.5
Msa0970400 AT1G53570.6 29.412 187 119 5 256 439 218 394 7.07e-14 75.1
Msa0970400 AT1G53570.7 29.412 187 119 5 256 439 218 394 7.15e-14 75.1
Msa0970400 AT1G09000.1 28.774 212 130 8 252 450 69 272 7.50e-14 75.5
Msa0970400 AT1G53570.4 29.412 187 119 5 256 439 218 394 9.53e-14 75.1
Msa0970400 AT1G53570.2 29.412 187 119 5 256 439 218 394 9.53e-14 75.1
Msa0970400 AT1G53570.3 29.412 187 119 5 256 439 218 394 9.53e-14 75.1
Msa0970400 AT1G53570.1 29.412 187 119 5 256 439 218 394 9.55e-14 75.1
Msa0970400 AT1G30270.1 29.412 153 102 3 249 399 28 176 1.02e-13 74.3
Msa0970400 AT1G30270.2 29.412 153 102 3 249 399 28 176 1.18e-13 74.3
Msa0970400 AT3G23000.1 31.013 158 94 4 249 399 22 171 1.51e-13 73.6
Msa0970400 AT1G48260.1 32.026 153 102 2 247 399 6 156 2.28e-13 73.2
Msa0970400 AT4G09570.1 31.818 154 99 4 251 400 24 175 2.41e-13 73.2
Msa0970400 AT4G26070.4 30.516 213 124 8 214 411 20 223 3.10e-13 72.0
Msa0970400 AT4G26070.1 30.460 174 114 5 240 411 56 224 3.55e-13 71.2
Msa0970400 AT3G10660.2 32.680 153 97 4 252 400 186 336 3.67e-13 73.2
Msa0970400 AT3G10660.1 32.680 153 97 4 252 400 186 336 3.67e-13 73.2
Msa0970400 AT2G17890.1 29.834 181 114 5 252 427 108 280 4.14e-13 72.8
Msa0970400 AT5G45430.2 29.947 187 113 7 249 432 1 172 4.29e-13 72.4
Msa0970400 AT4G26070.5 30.460 174 114 5 240 411 43 211 4.38e-13 71.6
Msa0970400 AT5G45430.1 29.947 187 113 7 249 432 1 172 4.47e-13 72.4
Msa0970400 AT4G26070.2 30.460 174 114 5 240 411 56 224 4.99e-13 71.2
Msa0970400 AT4G26070.3 30.460 174 114 5 240 411 56 224 4.99e-13 71.2
Msa0970400 AT4G19110.2 28.649 185 118 5 249 432 1 172 6.35e-13 72.0
Msa0970400 AT4G19110.1 28.649 185 118 5 249 432 1 172 6.51e-13 71.6
Msa0970400 AT1G50700.3 33.333 153 96 4 252 400 73 223 6.62e-13 72.0
Msa0970400 AT1G50700.1 33.333 153 96 4 252 400 73 223 9.68e-13 71.6
Msa0970400 AT1G50700.2 33.333 153 96 4 252 400 73 223 1.16e-12 71.2
Msa0970400 AT4G04720.2 30.719 153 100 4 252 400 80 230 1.47e-12 70.9
Msa0970400 AT4G04720.1 30.719 153 100 4 252 400 80 230 1.47e-12 70.9
Msa0970400 AT1G32320.1 31.034 145 92 2 255 399 51 187 1.67e-12 69.3
Msa0970400 AT1G53165.1 28.105 153 106 2 251 403 14 162 1.78e-12 70.9
Msa0970400 AT1G53165.3 28.105 153 106 2 251 403 14 162 1.91e-12 70.9
Msa0970400 AT3G20410.2 32.026 153 98 4 252 400 91 241 1.91e-12 70.5
Msa0970400 AT3G20410.1 32.026 153 98 4 252 400 91 241 1.91e-12 70.5
Msa0970400 AT1G53165.2 28.105 153 106 2 251 403 14 162 2.02e-12 70.9
Msa0970400 AT1G50240.3 33.333 102 62 2 482 583 161 256 2.14e-12 71.2
Msa0970400 AT1G50240.3 29.375 160 109 3 252 411 6 161 1.37e-11 68.6
Msa0970400 AT1G50240.2 33.333 102 62 2 482 583 161 256 2.14e-12 71.2
Msa0970400 AT1G50240.2 29.375 160 109 3 252 411 6 161 1.37e-11 68.6
Msa0970400 AT4G35310.2 27.869 183 123 5 252 432 97 272 3.52e-12 69.7
Msa0970400 AT4G35310.1 27.869 183 123 5 252 432 97 272 3.52e-12 69.7
Msa0970400 AT4G30960.1 29.677 155 105 3 245 399 18 168 3.70e-12 69.3
Msa0970400 AT2G41860.2 32.026 153 98 4 252 400 54 204 4.17e-12 69.3
Msa0970400 AT2G41860.1 32.026 153 98 4 252 400 54 204 4.39e-12 69.3
Msa0970400 AT1G69220.2 30.137 146 93 3 261 403 231 370 4.89e-12 69.7
Msa0970400 AT1G12580.1 27.434 226 146 7 207 427 2 214 5.05e-12 69.3
Msa0970400 AT2G38910.1 29.609 179 115 6 252 427 134 304 7.44e-12 68.9
Msa0970400 AT3G21220.2 29.452 146 93 3 255 399 73 209 1.10e-11 67.4
Msa0970400 AT3G21220.1 29.452 146 93 3 255 399 73 209 1.10e-11 67.4
Msa0970400 AT5G04870.1 30.000 180 113 5 252 427 150 320 1.17e-11 68.2
Msa0970400 AT2G35890.2 26.695 236 151 8 203 427 78 302 1.22e-11 68.2
Msa0970400 AT2G35890.1 26.695 236 151 8 203 427 78 302 1.22e-11 68.2
Msa0970400 AT1G73500.1 29.730 148 93 4 255 399 50 189 1.57e-11 66.2
Msa0970400 AT5G24430.1 25.946 185 122 5 250 427 141 317 1.65e-11 67.8
Msa0970400 AT2G41140.1 29.032 186 113 6 251 427 122 297 1.72e-11 67.8
Msa0970400 AT3G56760.1 31.288 163 102 5 251 406 123 282 1.82e-11 67.4
Msa0970400 AT3G57530.2 33.557 149 93 4 256 400 67 213 1.84e-11 67.0
Msa0970400 AT2G31500.1 34.228 149 92 4 256 400 70 216 2.09e-11 67.4
Msa0970400 AT4G10010.2 33.775 151 93 5 252 399 156 302 2.65e-11 67.0
Msa0970400 AT3G57530.1 33.557 149 93 4 256 400 67 213 2.75e-11 67.0
Msa0970400 AT1G63700.1 25.749 167 120 2 240 404 388 552 2.93e-11 67.4
Msa0970400 AT1G63700.2 25.749 167 120 2 240 404 388 552 2.93e-11 67.4
Msa0970400 AT1G78290.3 32.258 155 93 5 249 399 1 147 3.26e-11 65.9
Msa0970400 AT1G78290.2 32.258 155 93 5 249 399 1 147 3.26e-11 65.9
Msa0970400 AT4G36070.1 27.473 182 119 5 251 427 70 243 3.34e-11 66.6
Msa0970400 AT5G19360.1 31.373 153 99 4 252 400 68 218 3.42e-11 66.6
Msa0970400 AT2G17290.1 29.936 157 106 4 252 406 85 239 3.55e-11 66.6
Msa0970400 AT2G17290.2 29.936 157 106 4 252 406 85 239 3.55e-11 66.6
Msa0970400 AT4G36070.2 29.870 154 102 4 251 399 70 222 3.68e-11 66.6
Msa0970400 AT5G66210.3 27.072 181 121 3 251 427 61 234 3.71e-11 66.2
Msa0970400 AT5G57565.2 32.520 123 72 3 311 429 14 129 3.88e-11 61.6
Msa0970400 AT5G57565.6 32.520 123 72 3 311 429 14 129 3.88e-11 61.6
Msa0970400 AT5G66210.5 27.072 181 121 3 251 427 61 234 4.33e-11 66.2
Msa0970400 AT5G12180.1 31.373 153 99 4 252 400 73 223 4.40e-11 66.2
Msa0970400 AT3G05050.3 30.405 148 102 1 252 399 138 284 4.43e-11 66.2
Msa0970400 AT3G05050.2 30.405 148 102 1 252 399 138 284 4.43e-11 66.2
Msa0970400 AT3G05050.1 30.405 148 102 1 252 399 138 284 4.43e-11 66.2
Msa0970400 AT5G66210.6 27.072 181 121 3 251 427 61 234 4.58e-11 65.9
Msa0970400 AT5G66210.4 27.072 181 121 3 251 427 61 234 4.58e-11 65.9
Msa0970400 AT5G66210.1 27.072 181 121 3 251 427 61 234 5.05e-11 65.9
Msa0970400 AT5G66210.2 27.072 181 121 3 251 427 61 234 5.05e-11 65.9
Msa0970400 AT5G12480.1 29.870 154 102 4 251 400 58 209 6.09e-11 65.9
Msa0970400 AT3G15220.1 26.797 153 108 2 251 403 14 162 6.37e-11 65.9
Msa0970400 AT4G29810.1 29.121 182 116 5 235 411 53 226 7.57e-11 64.7
Msa0970400 AT5G19450.2 30.719 153 100 4 252 400 57 207 7.82e-11 65.5
Msa0970400 AT5G19450.1 30.719 153 100 4 252 400 57 207 7.82e-11 65.5
Msa0970400 AT3G49370.1 28.834 163 103 5 244 399 139 295 8.64e-11 65.5
Msa0970400 AT1G73690.1 33.775 151 91 5 253 399 10 155 8.90e-11 64.7
Msa0970400 AT1G66750.1 34.211 152 89 6 253 399 12 157 9.56e-11 64.3
Msa0970400 AT4G29810.2 29.121 182 116 5 235 411 62 235 9.58e-11 64.7
Msa0970400 AT5G23580.1 31.333 150 97 4 258 403 28 175 9.66e-11 65.1

Find 134 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTGGCTGACTGTCTT+AGG 0.142901 6_4:+1916904 Msa0970400:CDS
ATGTTGTTGGGCAGCCTTTA+AGG 0.173778 6_4:+1916061 Msa0970400:CDS
TCCTTGATTATTTCTATATA+AGG 0.186285 6_4:-1913800 None:intergenic
CCTTCACCTTTGATAATTTC+AGG 0.209471 6_4:-1915934 None:intergenic
TTATGTTGTTCCAGGTTTCT+TGG 0.220916 6_4:+1916890 Msa0970400:intron
GGAGATTCTGGAAACCTTAA+AGG 0.266914 6_4:-1916075 None:intergenic
CGAACACCATTCAAAGGTTC+TGG 0.282954 6_4:+1916018 Msa0970400:CDS
AGACATTATCATCATAATTA+TGG 0.289252 6_4:+1913856 Msa0970400:CDS
GAATGGATGTTGTTTGATTT+CGG 0.318757 6_4:-1916184 None:intergenic
AAGCTGACAGTAGGAGATTC+TGG 0.319263 6_4:-1916087 None:intergenic
CTTATATCATTTGCCTTATG+AGG 0.331403 6_4:-1914357 None:intergenic
TGCAGAAGTTCTGCTTGCTT+TGG 0.345070 6_4:+1915534 Msa0970400:CDS
TCGCGAGGGGATGTTGGAAA+TGG 0.346924 6_4:+1914407 Msa0970400:CDS
TTTCTTGGCTGACTGTCTTA+GGG 0.351781 6_4:+1916905 Msa0970400:CDS
CCTTGATTATTTCTATATAA+GGG 0.352324 6_4:-1913799 None:intergenic
CTATTCAGCCACCGTCTATT+CGG 0.354971 6_4:+1914140 Msa0970400:CDS
TCTGGCTGCATTGCACATGC+TGG 0.356299 6_4:-1915739 None:intergenic
CGCGAGGGGATGTTGGAAAT+GGG 0.363431 6_4:+1914408 Msa0970400:CDS
TTCTTATACGAACTCTTGTT+TGG 0.364317 6_4:+1915994 Msa0970400:CDS
CATTCTTTCACAATGTGAAC+TGG 0.366931 6_4:+1916202 Msa0970400:CDS
CGGGGAATCCCTGATGTTAT+AGG 0.370257 6_4:-1913763 None:intergenic
AGATTGGGAAGTGGAGATAT+AGG 0.370938 6_4:+1914450 Msa0970400:CDS
TAAGGGAGGCCGCGAAGAAC+GGG 0.378316 6_4:-1913782 None:intergenic
TAACTACATAGCTGTTTAGA+TGG 0.380890 6_4:-1913894 None:intergenic
TCTATAGGCAAGACGATGTT+GGG 0.381158 6_4:-1916151 None:intergenic
ACCACGATGTTTAATGTTGT+TGG 0.384486 6_4:+1916048 Msa0970400:CDS
AGTGAGTGTGTGAGTGTTGA+TGG 0.390003 6_4:+1914195 Msa0970400:CDS
GAAGTTGGAATGAACCCTTC+TGG 0.395335 6_4:+1916300 Msa0970400:CDS
GTTGGCTCTGCGACTAGCTC+AGG 0.397789 6_4:-1915865 None:intergenic
CAGAACCTTTGAATGGTGTT+CGG 0.404895 6_4:-1916017 None:intergenic
CTGTGGATTGGTGGACGTTC+GGG 0.406089 6_4:+1915968 Msa0970400:CDS
TTAGTTTCAGTGATCGGGTT+TGG 0.409046 6_4:-1915694 None:intergenic
GCTGTGGATTGGTGGACGTT+CGG 0.420545 6_4:+1915967 Msa0970400:CDS
TTCGGTAGCTCCGCGTCTAT+AGG 0.426540 6_4:-1916166 None:intergenic
TCATTAAAATCACTGAAATT+CGG 0.427397 6_4:-1914243 None:intergenic
TACTGTCAGCTTTGCTGCAA+GGG 0.433649 6_4:+1916098 Msa0970400:CDS
CAACTCGTAAGAAGCTACTA+AGG 0.438073 6_4:+1914547 Msa0970400:CDS
TTGGAGTACTTGCACATGCT+TGG 0.440491 6_4:+1915553 Msa0970400:CDS
GACATTGACCGCGCACTTGT+TGG 0.440756 6_4:-1915883 None:intergenic
TTCATCATCATGGTCTGTCT+TGG 0.441424 6_4:-1916258 None:intergenic
TTTAGAATATTGAAGAGATT+GGG 0.441585 6_4:+1914435 Msa0970400:CDS
GACACTCTCTTGCTTGGTAA+TGG 0.442984 6_4:+1914647 Msa0970400:CDS
CCACGATGTTTAATGTTGTT+GGG 0.443702 6_4:+1916049 Msa0970400:CDS
GTGGCGACCTTCATGCAATC+AGG 0.443810 6_4:+1914682 Msa0970400:CDS
GGTACTCGCTCTACAGATAC+TGG 0.445373 6_4:-1914277 None:intergenic
TGAGTTTGGTTTCATCATCA+TGG 0.445934 6_4:-1916268 None:intergenic
GACTGAGAATAGTAATTCTT+CGG 0.446631 6_4:-1914081 None:intergenic
TTCATCGCTAACATCACTTC+CGG 0.448222 6_4:-1914298 None:intergenic
TGTAGGCACACACGAGTACT+TGG 0.448323 6_4:+1915909 Msa0970400:CDS
CGATTCCCAGAACCTTTGAA+TGG 0.449595 6_4:-1916024 None:intergenic
GCTCAGGGAGAGGTGTCATT+TGG 0.450141 6_4:-1915849 None:intergenic
CACAGCCTTCCTATAACATC+AGG 0.452461 6_4:+1913754 Msa0970400:CDS
AAGAAACAATGAAAGGTTGC+CGG 0.455081 6_4:+1913939 Msa0970400:CDS
AACTCAACTGAAAATGAAGT+TGG 0.456517 6_4:+1916285 Msa0970400:CDS
ATAGTTTCAACTGCAGTCAT+AGG 0.457366 6_4:-1913691 None:intergenic
TGCTGGCTGAATGCAGTATC+CGG 0.457718 6_4:-1915722 None:intergenic
TGCTTTGTATAAACCTCATA+AGG 0.460243 6_4:+1914344 Msa0970400:CDS
GCAATCAGGCAAAGACAACC+TGG 0.462233 6_4:+1914696 Msa0970400:CDS
GCGCGGTCAATGTCCTTTGT+AGG 0.466444 6_4:+1915892 Msa0970400:CDS
TTTGGTGACTTCACTAGAGT+TGG 0.473963 6_4:-1915676 None:intergenic
ATGGTCTGTCTTGGTACCTC+TGG 0.474291 6_4:-1916249 None:intergenic
GTCTATAGGCAAGACGATGT+TGG 0.475658 6_4:-1916152 None:intergenic
ATAAGGCAAATGATATAAGA+TGG 0.476777 6_4:+1914361 Msa0970400:CDS
TTAACAACGGCTCGTTTCGA+TGG 0.483495 6_4:-1914054 None:intergenic
GTATATCTAGCTGAACTTAG+TGG 0.485543 6_4:+1914477 Msa0970400:CDS
GACTGAGACACTCTCTTGCT+TGG 0.489683 6_4:+1914641 Msa0970400:CDS
GATTGCATGAAGGTCGCCAC+CGG 0.501221 6_4:-1914679 None:intergenic
CTACTGTCAGCTTTGCTGCA+AGG 0.509881 6_4:+1916097 Msa0970400:CDS
ATCACTGAAACTAAAAGCTC+CGG 0.510058 6_4:+1915703 Msa0970400:CDS
CCGAGCTCGCGAGGGGATGT+TGG 0.511381 6_4:+1914401 Msa0970400:CDS
CAGGGATTCCCCGTTCTTCG+CGG 0.512241 6_4:+1913773 Msa0970400:CDS
TCAAAGTGTGTATATAATGT+AGG 0.514064 6_4:-1914618 None:intergenic
AAAACAAACTAAGACAACTT+AGG 0.515460 6_4:-1916951 None:intergenic
CATGCATGTTGGATGCAGTC+TGG 0.515667 6_4:-1915757 None:intergenic
GTCTTTGCCTGATTGCATGA+AGG 0.516240 6_4:-1914689 None:intergenic
CAGTTCACATTGTGAAAGAA+TGG 0.524170 6_4:-1916201 None:intergenic
CCAACATCCCCTCGCGAGCT+CGG 0.527137 6_4:-1914401 None:intergenic
TAGTAACTGTTCTGAGGACT+AGG 0.528414 6_4:-1914120 None:intergenic
TCAAGCTGTCCGAGCTCGCG+AGG 0.536729 6_4:+1914392 Msa0970400:CDS
ATAAGGGAGGCCGCGAAGAA+CGG 0.539279 6_4:-1913783 None:intergenic
GGTTCAGAATTCAGTTTCTG+AGG 0.551440 6_4:+1913720 Msa0970400:CDS
ATATTGAAGAGATTGGGAAG+TGG 0.554065 6_4:+1914441 Msa0970400:CDS
ATTCTAAATAATTACCAGAA+GGG 0.554776 6_4:-1916314 None:intergenic
CCCTTATATAGAAATAATCA+AGG 0.559154 6_4:+1913799 Msa0970400:CDS
TAAGGCAAATGATATAAGAT+GGG 0.559236 6_4:+1914362 Msa0970400:CDS
ATGGAAGTGCTGTGGATTGG+TGG 0.563144 6_4:+1915959 Msa0970400:CDS
GAACACCATTCAAAGGTTCT+GGG 0.567648 6_4:+1916019 Msa0970400:CDS
TTTGGCCGAACACCATTCAA+AGG 0.568709 6_4:+1916012 Msa0970400:CDS
TTGTTTCGCTTCCGAATAGA+CGG 0.570744 6_4:-1914151 None:intergenic
ATAGGAAGGCTGTGGCGTAT+CGG 0.571857 6_4:-1913745 None:intergenic
ATTGCATGAAGGTCGCCACC+GGG 0.573434 6_4:-1914678 None:intergenic
AGTATCTGTAGAGCGAGTAC+CGG 0.579881 6_4:+1914279 Msa0970400:CDS
ATTATCAAAGGTGAAGGACA+TGG 0.585663 6_4:+1915940 Msa0970400:CDS
ATTCTTTCACAATGTGAACT+GGG 0.590369 6_4:+1916203 Msa0970400:CDS
GACATGGAAGTGCTGTGGAT+TGG 0.591538 6_4:+1915956 Msa0970400:CDS
GTCTGTCTTGGTACCTCTGG+CGG 0.591624 6_4:-1916246 None:intergenic
TTGGCTCTGCGACTAGCTCA+GGG 0.594167 6_4:-1915864 None:intergenic
GCTGCAAGGGACTTGATCAG+AGG 0.595287 6_4:+1916111 Msa0970400:CDS
GCGAGGGGATGTTGGAAATG+GGG 0.597867 6_4:+1914409 Msa0970400:CDS
CCTGAAATTATCAAAGGTGA+AGG 0.598793 6_4:+1915934 Msa0970400:CDS
TTCTTGGCTGACTGTCTTAG+GGG 0.601605 6_4:+1916906 Msa0970400:CDS
GAAGCTACTAAGGGCTCAGA+CGG 0.606383 6_4:+1914557 Msa0970400:CDS
TGCAGTTGAAACTATTGCAG+AGG 0.606600 6_4:+1913699 Msa0970400:CDS
ATCACGAAAGAAACAATGAA+AGG 0.611280 6_4:+1913932 Msa0970400:CDS
ATTCTTCGGTTGATTAACAA+CGG 0.617928 6_4:-1914067 None:intergenic
AAGCTGTCCGAGCTCGCGAG+GGG 0.618922 6_4:+1914394 Msa0970400:CDS
CAAGCTGTCCGAGCTCGCGA+GGG 0.623020 6_4:+1914393 Msa0970400:CDS
TGATTATTTCTATATAAGGG+AGG 0.623039 6_4:-1913796 None:intergenic
TTGGCGCCTGAAATTATCAA+AGG 0.624538 6_4:+1915928 Msa0970400:CDS
AACTCGTAAGAAGCTACTAA+GGG 0.627316 6_4:+1914548 Msa0970400:CDS
CTTGCAGCAAAGCTGACAGT+AGG 0.631317 6_4:-1916096 None:intergenic
AATGTGTTGGTGAGAGAAGA+CGG 0.638684 6_4:+1915604 Msa0970400:CDS
TCTGCGACTAGCTCAGGGAG+AGG 0.639914 6_4:-1915859 None:intergenic
GAATCCCTGATGTTATAGGA+AGG 0.643848 6_4:-1913759 None:intergenic
CATCGTCTTGCCTATAGACG+CGG 0.650411 6_4:+1916156 Msa0970400:CDS
CTGATGTTATAGGAAGGCTG+TGG 0.652569 6_4:-1913753 None:intergenic
GCTGAATAGTAACTGTTCTG+AGG 0.653333 6_4:-1914126 None:intergenic
CCTTAAGCCTGAAAATGTGT+TGG 0.653684 6_4:+1915591 Msa0970400:CDS
TTTCGCTTCCGAATAGACGG+TGG 0.656224 6_4:-1914148 None:intergenic
CTATAGGCAAGACGATGTTG+GGG 0.658366 6_4:-1916150 None:intergenic
GTACTCGTGTGTGCCTACAA+AGG 0.659826 6_4:-1915905 None:intergenic
AGCAACACAAGTAGTTTGAG+CGG 0.661120 6_4:+1914321 Msa0970400:CDS
CTTCACTAGAGTTGGACTGA+CGG 0.661951 6_4:-1915668 None:intergenic
AAGGGAGGCCGCGAAGAACG+GGG 0.663699 6_4:-1913781 None:intergenic
CAATCAGGCAAAGACAACCT+GGG 0.663791 6_4:+1914697 Msa0970400:CDS
CCGCTGCGCTAATCCGCCAG+AGG 0.665665 6_4:+1916233 Msa0970400:CDS
TGAAGGACATGGAAGTGCTG+TGG 0.668077 6_4:+1915951 Msa0970400:CDS
TAGCTGAACTTAGTGGCACA+AGG 0.668425 6_4:+1914484 Msa0970400:CDS
GTGGCGAAAAGCATGCATGT+TGG 0.669257 6_4:-1915768 None:intergenic
TCGCAGAGCCAACAAGTGCG+CGG 0.675937 6_4:+1915875 Msa0970400:CDS
ACAGCCTTCCTATAACATCA+GGG 0.679147 6_4:+1913755 Msa0970400:CDS
CCTCTGGCGGATTAGCGCAG+CGG 0.690338 6_4:-1916233 None:intergenic
GATGGTAAGTCGTGTGAGAG+CGG 0.692630 6_4:+1914213 Msa0970400:CDS
CCCAACAACATTAAACATCG+TGG 0.694205 6_4:-1916049 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTATTCTAATAATTAAT+TGG - chr6_4:1916591-1916610 None:intergenic 10.0%
!!! ATAATATGTTTTCATTAATG+TGG - chr6_4:1915341-1915360 None:intergenic 15.0%
!! ATTATGTTATATAGGAAAAT+GGG - chr6_4:1916532-1916551 None:intergenic 15.0%
!! AATTATGTTATATAGGAAAA+TGG - chr6_4:1916533-1916552 None:intergenic 15.0%
!! ATAGAGAAATTATGTTATAT+AGG - chr6_4:1916540-1916559 None:intergenic 15.0%
!!! CCTTGATTATTTCTATATAA+GGG - chr6_4:1913802-1913821 None:intergenic 20.0%
!!! TCCTTGATTATTTCTATATA+AGG - chr6_4:1913803-1913822 None:intergenic 20.0%
!! AGACATTATCATCATAATTA+TGG + chr6_4:1913856-1913875 Msa0970400:CDS 20.0%
!! TCATTAAAATCACTGAAATT+CGG - chr6_4:1914246-1914265 None:intergenic 20.0%
!!! TTTTAGAATATTGAAGAGAT+TGG + chr6_4:1914434-1914453 Msa0970400:CDS 20.0%
!!! TTTAGAATATTGAAGAGATT+GGG + chr6_4:1914435-1914454 Msa0970400:CDS 20.0%
!! GTATATAATGTAGGTAAAAA+AGG - chr6_4:1914612-1914631 None:intergenic 20.0%
!! ATACACAAATCAAATTGAAT+AGG - chr6_4:1914794-1914813 None:intergenic 20.0%
!!! TCTTTTTCCTTCTAATATAA+TGG + chr6_4:1915139-1915158 Msa0970400:intron 20.0%
!! GTAAAATCCATTATATTAGA+AGG - chr6_4:1915149-1915168 None:intergenic 20.0%
!! GAAACAGATATCAATTAATT+TGG + chr6_4:1915287-1915306 Msa0970400:intron 20.0%
!! ACTTGTATAATAAACACTTA+TGG + chr6_4:1915419-1915438 Msa0970400:intron 20.0%
!! AAGTAAGATGTTTATCTTAT+AGG + chr6_4:1915453-1915472 Msa0970400:intron 20.0%
!! AGTAAGATGTTTATCTTATA+GGG + chr6_4:1915454-1915473 Msa0970400:intron 20.0%
!!! ATTTCTCTAATTTTCGTTTT+CGG + chr6_4:1915492-1915511 Msa0970400:intron 20.0%
!! ATTCTAAATAATTACCAGAA+GGG - chr6_4:1916317-1916336 None:intergenic 20.0%
!! AATTCTAAATAATTACCAGA+AGG - chr6_4:1916318-1916337 None:intergenic 20.0%
!!! ATCTTTTATTCAATAAAGGA+AGG - chr6_4:1916393-1916412 None:intergenic 20.0%
!!! TGCAATCTTTTATTCAATAA+AGG - chr6_4:1916397-1916416 None:intergenic 20.0%
!!! AATAGTATTTACTCTTTTGT+CGG + chr6_4:1916603-1916622 Msa0970400:intron 20.0%
!!! TGATTATTTCTATATAAGGG+AGG - chr6_4:1913799-1913818 None:intergenic 25.0%
! CCCTTATATAGAAATAATCA+AGG + chr6_4:1913799-1913818 Msa0970400:CDS 25.0%
! ATAAGGCAAATGATATAAGA+TGG + chr6_4:1914361-1914380 Msa0970400:CDS 25.0%
! TAAGGCAAATGATATAAGAT+GGG + chr6_4:1914362-1914381 Msa0970400:CDS 25.0%
! TCAAAGTGTGTATATAATGT+AGG - chr6_4:1914621-1914640 None:intergenic 25.0%
!! CTAAAGAAATTACATTGACT+AGG - chr6_4:1914826-1914845 None:intergenic 25.0%
! AACCAGTTTAATTAAGTACT+TGG + chr6_4:1914858-1914877 Msa0970400:intron 25.0%
! TTCCAAGTACTTAATTAAAC+TGG - chr6_4:1914863-1914882 None:intergenic 25.0%
! ATTAAGTACTTGGAATATAG+CGG + chr6_4:1914868-1914887 Msa0970400:intron 25.0%
!! TATAGCGGAAATAAATTACA+TGG + chr6_4:1914883-1914902 Msa0970400:intron 25.0%
!! TTTCTCTAATTTTCGTTTTC+GGG + chr6_4:1915493-1915512 Msa0970400:intron 25.0%
!!! TTTTTTCTCTTTGGATTTTC+CGG - chr6_4:1915803-1915822 None:intergenic 25.0%
!!! TAGTCTGAATTTTTTCTCTT+TGG - chr6_4:1915812-1915831 None:intergenic 25.0%
! ATTTGCCAAATTGTTGATAT+TGG + chr6_4:1916755-1916774 Msa0970400:intron 25.0%
!!! TATGTTTTTTATGTTGTTCC+AGG + chr6_4:1916882-1916901 Msa0970400:intron 25.0%
!!! TTCTTCTTCCAGATCTTTTT+TGG + chr6_4:1913828-1913847 Msa0970400:CDS 30.0%
TCTTTGTTCCAAAAAAGATC+TGG - chr6_4:1913839-1913858 None:intergenic 30.0%
TAACTACATAGCTGTTTAGA+TGG - chr6_4:1913897-1913916 None:intergenic 30.0%
ATCACGAAAGAAACAATGAA+AGG + chr6_4:1913932-1913951 Msa0970400:CDS 30.0%
ATTCTTCGGTTGATTAACAA+CGG - chr6_4:1914070-1914089 None:intergenic 30.0%
GACTGAGAATAGTAATTCTT+CGG - chr6_4:1914084-1914103 None:intergenic 30.0%
!! TCAGTGATTTTAATGAGAGT+AGG + chr6_4:1914250-1914269 Msa0970400:CDS 30.0%
TGCTTTGTATAAACCTCATA+AGG + chr6_4:1914344-1914363 Msa0970400:CDS 30.0%
CTTATATCATTTGCCTTATG+AGG - chr6_4:1914360-1914379 None:intergenic 30.0%
TTGATACATGTCTTCTTGTA+AGG - chr6_4:1914759-1914778 None:intergenic 30.0%
!!! TTAAACTGGTTTTCCAAACA+GGG - chr6_4:1914849-1914868 None:intergenic 30.0%
!!! ATTAAACTGGTTTTCCAAAC+AGG - chr6_4:1914850-1914869 None:intergenic 30.0%
GTAATTTATTTAGCCCTGTT+TGG + chr6_4:1914917-1914936 Msa0970400:intron 30.0%
TATCTTATGAAAAGCTCAGT+TGG - chr6_4:1914984-1915003 None:intergenic 30.0%
TATCAAGAAAGCTATAAGAG+AGG - chr6_4:1915313-1915332 None:intergenic 30.0%
TTCTTATACGAACTCTTGTT+TGG + chr6_4:1915994-1916013 Msa0970400:CDS 30.0%
! GAATGGATGTTGTTTGATTT+CGG - chr6_4:1916187-1916206 None:intergenic 30.0%
ATTCTTTCACAATGTGAACT+GGG + chr6_4:1916203-1916222 Msa0970400:CDS 30.0%
! ACTTCATTTTCAGTTGAGTT+TGG - chr6_4:1916285-1916304 None:intergenic 30.0%
AACTCAACTGAAAATGAAGT+TGG + chr6_4:1916285-1916304 Msa0970400:CDS 30.0%
TTCAATAAAGGAAGGAATCA+TGG - chr6_4:1916385-1916404 None:intergenic 30.0%
TCTTACAACAGTTCATCAAT+TGG - chr6_4:1916451-1916470 None:intergenic 30.0%
AAACTTTGTTCCTCAAGTTA+AGG - chr6_4:1916486-1916505 None:intergenic 30.0%
ATATAGGAAAATGGGAATAG+AGG - chr6_4:1916524-1916543 None:intergenic 30.0%
GTATCACACTCAATAAACAT+TGG - chr6_4:1916675-1916694 None:intergenic 30.0%
TTATTGAGTGTGATACTCTT+AGG + chr6_4:1916679-1916698 Msa0970400:intron 30.0%
TATTGAGTGTGATACTCTTA+GGG + chr6_4:1916680-1916699 Msa0970400:intron 30.0%
TTGGCAAATAATCTGGTAAT+TGG - chr6_4:1916744-1916763 None:intergenic 30.0%
CAACAATTTGGCAAATAATC+TGG - chr6_4:1916751-1916770 None:intergenic 30.0%
CACAACCAATATCAACAATT+TGG - chr6_4:1916763-1916782 None:intergenic 30.0%
ATAGTTTCAACTGCAGTCAT+AGG - chr6_4:1913694-1913713 None:intergenic 35.0%
AAGAAACAATGAAAGGTTGC+CGG + chr6_4:1913939-1913958 Msa0970400:CDS 35.0%
ATATTGAAGAGATTGGGAAG+TGG + chr6_4:1914441-1914460 Msa0970400:CDS 35.0%
GTATATCTAGCTGAACTTAG+TGG + chr6_4:1914477-1914496 Msa0970400:CDS 35.0%
AACTCGTAAGAAGCTACTAA+GGG + chr6_4:1914548-1914567 Msa0970400:CDS 35.0%
GTAATTTCTTTAGCCCTGTT+TGG + chr6_4:1914833-1914852 Msa0970400:intron 35.0%
CTAATCTGGTTATCCAAACA+GGG - chr6_4:1914933-1914952 None:intergenic 35.0%
ACTAATCTGGTTATCCAAAC+AGG - chr6_4:1914934-1914953 None:intergenic 35.0%
!! CTATAAGTGCTGAACTAATC+TGG - chr6_4:1914947-1914966 None:intergenic 35.0%
! GATTAGTTCAGCACTTATAG+TGG + chr6_4:1914947-1914966 Msa0970400:intron 35.0%
! AAGAGATTATATCGGCTACT+AGG - chr6_4:1915031-1915050 None:intergenic 35.0%
TAGTAGCCGATATAATCTCT+TGG + chr6_4:1915030-1915049 Msa0970400:intron 35.0%
AGCACACCAAGAGATTATAT+CGG - chr6_4:1915039-1915058 None:intergenic 35.0%
! TATAATCTCTTGGTGTGCTT+AGG + chr6_4:1915040-1915059 Msa0970400:intron 35.0%
AGTGAAAAGAAGCAAGAAAC+TGG - chr6_4:1915071-1915090 None:intergenic 35.0%
CTGTACTTAATCAACAGCTA+CGG + chr6_4:1915263-1915282 Msa0970400:intron 35.0%
!! CAGATTTTGATCTCTCTCTA+AGG + chr6_4:1915641-1915660 Msa0970400:CDS 35.0%
!!! AGCTTTTAGTTTCAGTGATC+GGG - chr6_4:1915702-1915721 None:intergenic 35.0%
!!! GAGCTTTTAGTTTCAGTGAT+CGG - chr6_4:1915703-1915722 None:intergenic 35.0%
ATCACTGAAACTAAAAGCTC+CGG + chr6_4:1915703-1915722 Msa0970400:CDS 35.0%
! CCTTCACCTTTGATAATTTC+AGG - chr6_4:1915937-1915956 None:intergenic 35.0%
CCTGAAATTATCAAAGGTGA+AGG + chr6_4:1915934-1915953 Msa0970400:CDS 35.0%
ATTATCAAAGGTGAAGGACA+TGG + chr6_4:1915940-1915959 Msa0970400:CDS 35.0%
ACCACGATGTTTAATGTTGT+TGG + chr6_4:1916048-1916067 Msa0970400:CDS 35.0%
CCACGATGTTTAATGTTGTT+GGG + chr6_4:1916049-1916068 Msa0970400:CDS 35.0%
CAGTTCACATTGTGAAAGAA+TGG - chr6_4:1916204-1916223 None:intergenic 35.0%
CATTCTTTCACAATGTGAAC+TGG + chr6_4:1916202-1916221 Msa0970400:CDS 35.0%
! TGAGTTTGGTTTCATCATCA+TGG - chr6_4:1916271-1916290 None:intergenic 35.0%
AATGCTATGTGTAGAGTTTG+TGG + chr6_4:1916358-1916377 Msa0970400:intron 35.0%
! ATTCCAAATGCCTTAACTTG+AGG + chr6_4:1916473-1916492 Msa0970400:intron 35.0%
! TCTATAGTCGCTCGAATTTT+GGG + chr6_4:1916555-1916574 Msa0970400:intron 35.0%
! AGTATTTACTCTTTTGTCGG+AGG + chr6_4:1916606-1916625 Msa0970400:intron 35.0%
! GTGTAATTTGTGACATCAAG+TGG + chr6_4:1916780-1916799 Msa0970400:intron 35.0%
TTATGTTGTTCCAGGTTTCT+TGG + chr6_4:1916890-1916909 Msa0970400:intron 35.0%
TGCAGTTGAAACTATTGCAG+AGG + chr6_4:1913699-1913718 Msa0970400:CDS 40.0%
GGTTCAGAATTCAGTTTCTG+AGG + chr6_4:1913720-1913739 Msa0970400:CDS 40.0%
ACAGCCTTCCTATAACATCA+GGG + chr6_4:1913755-1913774 Msa0970400:CDS 40.0%
GAATCCCTGATGTTATAGGA+AGG - chr6_4:1913762-1913781 None:intergenic 40.0%
!! TGCTTGCTGCATAATTTTGC+CGG - chr6_4:1913961-1913980 None:intergenic 40.0%
!! TAGTAACTGTTCTGAGGACT+AGG - chr6_4:1914123-1914142 None:intergenic 40.0%
GCTGAATAGTAACTGTTCTG+AGG - chr6_4:1914129-1914148 None:intergenic 40.0%
TTGTTTCGCTTCCGAATAGA+CGG - chr6_4:1914154-1914173 None:intergenic 40.0%
TTCATCGCTAACATCACTTC+CGG - chr6_4:1914301-1914320 None:intergenic 40.0%
AGCAACACAAGTAGTTTGAG+CGG + chr6_4:1914321-1914340 Msa0970400:CDS 40.0%
AGATTGGGAAGTGGAGATAT+AGG + chr6_4:1914450-1914469 Msa0970400:CDS 40.0%
CAACTCGTAAGAAGCTACTA+AGG + chr6_4:1914547-1914566 Msa0970400:CDS 40.0%
!!! TTGGTAATGGAGTTTTGTCC+CGG + chr6_4:1914660-1914679 Msa0970400:CDS 40.0%
!! TGCTCTGAAAAATACTTCCC+AGG - chr6_4:1914717-1914736 None:intergenic 40.0%
!! ATTTTTCAGAGCATGCTGTC+AGG + chr6_4:1914724-1914743 Msa0970400:CDS 40.0%
GGCTACTAGGTATAAATCTC+AGG - chr6_4:1915018-1915037 None:intergenic 40.0%
!!! TTTCGTTTTCGGGTTTTTGC+AGG + chr6_4:1915503-1915522 Msa0970400:intron 40.0%
!! CCAACACATTTTCAGGCTTA+AGG - chr6_4:1915594-1915613 None:intergenic 40.0%
CCTTAAGCCTGAAAATGTGT+TGG + chr6_4:1915591-1915610 Msa0970400:CDS 40.0%
! TCTCTCACCAACACATTTTC+AGG - chr6_4:1915601-1915620 None:intergenic 40.0%
! AATGTGTTGGTGAGAGAAGA+CGG + chr6_4:1915604-1915623 Msa0970400:CDS 40.0%
! TTTGGTGACTTCACTAGAGT+TGG - chr6_4:1915679-1915698 None:intergenic 40.0%
TTAGTTTCAGTGATCGGGTT+TGG - chr6_4:1915697-1915716 None:intergenic 40.0%
TTGGCGCCTGAAATTATCAA+AGG + chr6_4:1915928-1915947 Msa0970400:CDS 40.0%
CAGAACCTTTGAATGGTGTT+CGG - chr6_4:1916020-1916039 None:intergenic 40.0%
GAACACCATTCAAAGGTTCT+GGG + chr6_4:1916019-1916038 Msa0970400:CDS 40.0%
CCCAACAACATTAAACATCG+TGG - chr6_4:1916052-1916071 None:intergenic 40.0%
! GGAGATTCTGGAAACCTTAA+AGG - chr6_4:1916078-1916097 None:intergenic 40.0%
TCTATAGGCAAGACGATGTT+GGG - chr6_4:1916154-1916173 None:intergenic 40.0%
TTCATCATCATGGTCTGTCT+TGG - chr6_4:1916261-1916280 None:intergenic 40.0%
! GTTCCTCAAGTTAAGGCATT+TGG - chr6_4:1916479-1916498 None:intergenic 40.0%
! CTCTATAGTCGCTCGAATTT+TGG + chr6_4:1916554-1916573 Msa0970400:intron 40.0%
! CTATAGTCGCTCGAATTTTG+GGG + chr6_4:1916556-1916575 Msa0970400:intron 40.0%
! GAGGTCTAGAGCATTCATAA+TGG + chr6_4:1916625-1916644 Msa0970400:intron 40.0%
!! TAATGGACTAACTCTCTCCA+AGG + chr6_4:1916642-1916661 Msa0970400:intron 40.0%
!! AATGGACTAACTCTCTCCAA+GGG + chr6_4:1916643-1916662 Msa0970400:intron 40.0%
TAAACATTGGCATCAACCCT+TGG - chr6_4:1916662-1916681 None:intergenic 40.0%
TAGGGTTGTCAACATGATCT+AGG + chr6_4:1916698-1916717 Msa0970400:intron 40.0%
ATCTGGTAATTGGTACTCGA+CGG - chr6_4:1916734-1916753 None:intergenic 40.0%
TGACATCAAGTGGATACATG+TGG + chr6_4:1916790-1916809 Msa0970400:intron 40.0%
TTTCTTGGCTGACTGTCTTA+GGG + chr6_4:1916905-1916924 Msa0970400:CDS 40.0%
CTGATGTTATAGGAAGGCTG+TGG - chr6_4:1913756-1913775 None:intergenic 45.0%
CACAGCCTTCCTATAACATC+AGG + chr6_4:1913754-1913773 Msa0970400:CDS 45.0%
TTAACAACGGCTCGTTTCGA+TGG - chr6_4:1914057-1914076 None:intergenic 45.0%
CTATTCAGCCACCGTCTATT+CGG + chr6_4:1914140-1914159 Msa0970400:CDS 45.0%
!! AGTGAGTGTGTGAGTGTTGA+TGG + chr6_4:1914195-1914214 Msa0970400:CDS 45.0%
AGTATCTGTAGAGCGAGTAC+CGG + chr6_4:1914279-1914298 Msa0970400:CDS 45.0%
TAGCTGAACTTAGTGGCACA+AGG + chr6_4:1914484-1914503 Msa0970400:CDS 45.0%
GACACTCTCTTGCTTGGTAA+TGG + chr6_4:1914647-1914666 Msa0970400:CDS 45.0%
GTCTTTGCCTGATTGCATGA+AGG - chr6_4:1914692-1914711 None:intergenic 45.0%
CAATCAGGCAAAGACAACCT+GGG + chr6_4:1914697-1914716 Msa0970400:CDS 45.0%
TGCAGAAGTTCTGCTTGCTT+TGG + chr6_4:1915534-1915553 Msa0970400:CDS 45.0%
! TTGGAGTACTTGCACATGCT+TGG + chr6_4:1915553-1915572 Msa0970400:CDS 45.0%
CTTCACTAGAGTTGGACTGA+CGG - chr6_4:1915671-1915690 None:intergenic 45.0%
! AACATGCATGCTTTTCGCCA+CGG + chr6_4:1915770-1915789 Msa0970400:CDS 45.0%
! TTTTCGCCACGGTTTCTATC+CGG + chr6_4:1915781-1915800 Msa0970400:CDS 45.0%
! GATTTTCCGGATAGAAACCG+TGG - chr6_4:1915790-1915809 None:intergenic 45.0%
TTTGGCCGAACACCATTCAA+AGG + chr6_4:1916012-1916031 Msa0970400:CDS 45.0%
CGAACACCATTCAAAGGTTC+TGG + chr6_4:1916018-1916037 Msa0970400:CDS 45.0%
CGATTCCCAGAACCTTTGAA+TGG - chr6_4:1916027-1916046 None:intergenic 45.0%
ATGTTGTTGGGCAGCCTTTA+AGG + chr6_4:1916061-1916080 Msa0970400:CDS 45.0%
AAGCTGACAGTAGGAGATTC+TGG - chr6_4:1916090-1916109 None:intergenic 45.0%
TACTGTCAGCTTTGCTGCAA+GGG + chr6_4:1916098-1916117 Msa0970400:CDS 45.0%
CTATAGGCAAGACGATGTTG+GGG - chr6_4:1916153-1916172 None:intergenic 45.0%
GTCTATAGGCAAGACGATGT+TGG - chr6_4:1916155-1916174 None:intergenic 45.0%
GAAGTTGGAATGAACCCTTC+TGG + chr6_4:1916300-1916319 Msa0970400:CDS 45.0%
GGTTGTCAACATGATCTAGG+TGG + chr6_4:1916701-1916720 Msa0970400:intron 45.0%
TCTGGTAATTGGTACTCGAC+GGG - chr6_4:1916733-1916752 None:intergenic 45.0%
GTTTCTTGGCTGACTGTCTT+AGG + chr6_4:1916904-1916923 Msa0970400:CDS 45.0%
TTCTTGGCTGACTGTCTTAG+GGG + chr6_4:1916906-1916925 Msa0970400:CDS 45.0%
!!! CTGTCTTAGGGGCGATTTTT+TGG + chr6_4:1916917-1916936 Msa0970400:CDS 45.0%
ATAGGAAGGCTGTGGCGTAT+CGG - chr6_4:1913748-1913767 None:intergenic 50.0%
CGGGGAATCCCTGATGTTAT+AGG - chr6_4:1913766-1913785 None:intergenic 50.0%
TTTCGCTTCCGAATAGACGG+TGG - chr6_4:1914151-1914170 None:intergenic 50.0%
GATGGTAAGTCGTGTGAGAG+CGG + chr6_4:1914213-1914232 Msa0970400:CDS 50.0%
GGTACTCGCTCTACAGATAC+TGG - chr6_4:1914280-1914299 None:intergenic 50.0%
GAAGCTACTAAGGGCTCAGA+CGG + chr6_4:1914557-1914576 Msa0970400:CDS 50.0%
GACTGAGACACTCTCTTGCT+TGG + chr6_4:1914641-1914660 Msa0970400:CDS 50.0%
!! GTAATGGAGTTTTGTCCCGG+TGG + chr6_4:1914663-1914682 Msa0970400:CDS 50.0%
GCAATCAGGCAAAGACAACC+TGG + chr6_4:1914696-1914715 Msa0970400:CDS 50.0%
! TGCTGGCTGAATGCAGTATC+CGG - chr6_4:1915725-1915744 None:intergenic 50.0%
CATGCATGTTGGATGCAGTC+TGG - chr6_4:1915760-1915779 None:intergenic 50.0%
! GTGGCGAAAAGCATGCATGT+TGG - chr6_4:1915771-1915790 None:intergenic 50.0%
GTACTCGTGTGTGCCTACAA+AGG - chr6_4:1915908-1915927 None:intergenic 50.0%
TGTAGGCACACACGAGTACT+TGG + chr6_4:1915909-1915928 Msa0970400:CDS 50.0%
!! TGAAGGACATGGAAGTGCTG+TGG + chr6_4:1915951-1915970 Msa0970400:CDS 50.0%
!! GACATGGAAGTGCTGTGGAT+TGG + chr6_4:1915956-1915975 Msa0970400:CDS 50.0%
!! ATGGAAGTGCTGTGGATTGG+TGG + chr6_4:1915959-1915978 Msa0970400:CDS 50.0%
CTTGCAGCAAAGCTGACAGT+AGG - chr6_4:1916099-1916118 None:intergenic 50.0%
CTACTGTCAGCTTTGCTGCA+AGG + chr6_4:1916097-1916116 Msa0970400:CDS 50.0%
CATCGTCTTGCCTATAGACG+CGG + chr6_4:1916156-1916175 Msa0970400:CDS 50.0%
ATGGTCTGTCTTGGTACCTC+TGG - chr6_4:1916252-1916271 None:intergenic 50.0%
TGGTAATTGGTACTCGACGG+GGG - chr6_4:1916731-1916750 None:intergenic 50.0%
CTGGTAATTGGTACTCGACG+GGG - chr6_4:1916732-1916751 None:intergenic 50.0%
AGACAGTCAGCCAAGAAACC+TGG - chr6_4:1916903-1916922 None:intergenic 50.0%
ATAAGGGAGGCCGCGAAGAA+CGG - chr6_4:1913786-1913805 None:intergenic 55.0%
TCGCGAGGGGATGTTGGAAA+TGG + chr6_4:1914407-1914426 Msa0970400:CDS 55.0%
CGCGAGGGGATGTTGGAAAT+GGG + chr6_4:1914408-1914427 Msa0970400:CDS 55.0%
GCGAGGGGATGTTGGAAATG+GGG + chr6_4:1914409-1914428 Msa0970400:CDS 55.0%
ATTGCATGAAGGTCGCCACC+GGG - chr6_4:1914681-1914700 None:intergenic 55.0%
GATTGCATGAAGGTCGCCAC+CGG - chr6_4:1914682-1914701 None:intergenic 55.0%
GTGGCGACCTTCATGCAATC+AGG + chr6_4:1914682-1914701 Msa0970400:CDS 55.0%
TCTGGCTGCATTGCACATGC+TGG - chr6_4:1915742-1915761 None:intergenic 55.0%
!! GCTCAGGGAGAGGTGTCATT+TGG - chr6_4:1915852-1915871 None:intergenic 55.0%
!! TTGGCTCTGCGACTAGCTCA+GGG - chr6_4:1915867-1915886 None:intergenic 55.0%
GACATTGACCGCGCACTTGT+TGG - chr6_4:1915886-1915905 None:intergenic 55.0%
GCGCGGTCAATGTCCTTTGT+AGG + chr6_4:1915892-1915911 Msa0970400:CDS 55.0%
!! GCTGTGGATTGGTGGACGTT+CGG + chr6_4:1915967-1915986 Msa0970400:CDS 55.0%
!! CTGTGGATTGGTGGACGTTC+GGG + chr6_4:1915968-1915987 Msa0970400:CDS 55.0%
GCTGCAAGGGACTTGATCAG+AGG + chr6_4:1916111-1916130 Msa0970400:CDS 55.0%
TTCGGTAGCTCCGCGTCTAT+AGG - chr6_4:1916169-1916188 None:intergenic 55.0%
GTCTGTCTTGGTACCTCTGG+CGG - chr6_4:1916249-1916268 None:intergenic 55.0%
CAGGGATTCCCCGTTCTTCG+CGG + chr6_4:1913773-1913792 Msa0970400:CDS 60.0%
TAAGGGAGGCCGCGAAGAAC+GGG - chr6_4:1913785-1913804 None:intergenic 60.0%
! TCTGCGACTAGCTCAGGGAG+AGG - chr6_4:1915862-1915881 None:intergenic 60.0%
!! GTTGGCTCTGCGACTAGCTC+AGG - chr6_4:1915868-1915887 None:intergenic 60.0%
TCGCAGAGCCAACAAGTGCG+CGG + chr6_4:1915875-1915894 Msa0970400:CDS 60.0%
AAGGGAGGCCGCGAAGAACG+GGG - chr6_4:1913784-1913803 None:intergenic 65.0%
TCAAGCTGTCCGAGCTCGCG+AGG + chr6_4:1914392-1914411 Msa0970400:CDS 65.0%
CAAGCTGTCCGAGCTCGCGA+GGG + chr6_4:1914393-1914412 Msa0970400:CDS 65.0%
AAGCTGTCCGAGCTCGCGAG+GGG + chr6_4:1914394-1914413 Msa0970400:CDS 65.0%
CCAACATCCCCTCGCGAGCT+CGG - chr6_4:1914404-1914423 None:intergenic 65.0%
!! CCTCTGGCGGATTAGCGCAG+CGG - chr6_4:1916236-1916255 None:intergenic 65.0%
CCGAGCTCGCGAGGGGATGT+TGG + chr6_4:1914401-1914420 Msa0970400:CDS 70.0%
CCGCTGCGCTAATCCGCCAG+AGG + chr6_4:1916233-1916252 Msa0970400:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 1913682 1916965 1913682 ID=Msa0970400;Name=Msa0970400
chr6_4 mRNA 1913682 1916965 1913682 ID=Msa0970400-mRNA-1;Parent=Msa0970400;Name=Msa0970400-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.66|1|1|3|0|640
chr6_4 exon 1913682 1914745 1913682 ID=Msa0970400-mRNA-1:exon:912;Parent=Msa0970400-mRNA-1
chr6_4 exon 1915525 1916321 1915525 ID=Msa0970400-mRNA-1:exon:913;Parent=Msa0970400-mRNA-1
chr6_4 exon 1916904 1916965 1916904 ID=Msa0970400-mRNA-1:exon:914;Parent=Msa0970400-mRNA-1
chr6_4 CDS 1913682 1914745 1913682 ID=Msa0970400-mRNA-1:cds;Parent=Msa0970400-mRNA-1
chr6_4 CDS 1915525 1916321 1915525 ID=Msa0970400-mRNA-1:cds;Parent=Msa0970400-mRNA-1
chr6_4 CDS 1916904 1916965 1916904 ID=Msa0970400-mRNA-1:cds;Parent=Msa0970400-mRNA-1
Gene Sequence

>Msa0970400

ATGGAGTCTCCTATGACTGCAGTTGAAACTATTGCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCTTCCAGATCTTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGTTGCCGGCAAAATTATGCAGCAAGCAACTGTTTGATGATGATTCTGAGAATTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATAGTATCTTAGTTCCATCGAAACGAGCCGTTGTTAATCAACCGAAGAATTACTATTCTCAGTCAGAGACTAGTTTTTGTCCTAGTCCTCAGAACAGTTACTATTCAGCCACCGTCTATTCGGAAGCGAAACAAAGTTTCACAAGTACTGAAGTCAGTGAGTGTGTGAGTGTTGATGGTAAGTCGTGTGAGAGCGGAGAAGTTCCGAATTTCAGTGATTTTAATGAGAGTAGGAAAACCAGTATCTGTAGAGCGAGTACCGGAAGTGATGTTAGCGATGAAAGCAACACAAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGCGAGGGGATGTTGGAAATGGGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACTGAGCTTGCAACTCGTAAGAAGCTACTAAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAGCATGCTGTCAGGTTTTATGTTGCAGAAGTTCTGCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAGCCTGAAAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTCTCAGATTTTGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAGTGAAGTCACCAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCATGTGCAATGCAGCCAGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTCGCAGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATCAAAGGTGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGCCGAACACCATTCAAAGGTTCTGGGAATCGAACCACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGCTTACTTGTGAAAGAGCCCCAACATCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCATTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCTAATCCGCCAGAGGTACCAAGACAGACCATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGTTTCTTGGCTGACTGTCTTAGGGGCGATTTTTTGGATGATGTTTTTCCTAAGTTGTCTTAG
Protein sequence

>Msa0970400

MESPMTAVETIAEVQNSVSEVPIRHSLPITSGIPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERLPAKLCSKQLFDDDSENFDSSSEVLESDNSILVPSKRAVVNQPKNYYSQSETSFCPSPQNSYYSATVYSEAKQSFTSTEVSECVSVDGKSCESGEVPNFSDFNESRKTSICRASTGSDVSDESNTSSLSGALYKPHKANDIRWEAIQAVRAREGMLEMGHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSPNPITETKSSGYCIQPACAMQPDCIQHACFSPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMKPNSTENEVGMNPSGFLADCLRGDFLDDVFPKLS*