Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979760 | XP_013451423.1 | 95.929 | 393 | 16 | 0 | 1 | 393 | 1 | 393 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979760 | sp|Q9S850|SUOX_ARATH | 78.372 | 393 | 85 | 0 | 1 | 393 | 1 | 393 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979760 | A0A072U725 | 95.929 | 393 | 16 | 0 | 1 | 393 | 1 | 393 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0480320 | Msa0979760 | 0.819868 | 9.266326e-53 | -8.615850e-47 |
| Msa0877450 | Msa0979760 | 0.840983 | 6.256841e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979760 | MtrunA17_Chr6g0459641 | 95.929 | 393 | 16 | 0 | 1 | 393 | 1 | 393 | 0.0 | 788 |
| Msa0979760 | MtrunA17_Chr7g0227151 | 86.913 | 298 | 38 | 1 | 96 | 392 | 36 | 333 | 0.0 | 543 |
| Msa0979760 | MtrunA17_Chr5g0424491 | 33.075 | 387 | 225 | 11 | 20 | 387 | 90 | 461 | 5.42e-60 | 208 |
| Msa0979760 | MtrunA17_Chr3g0115151 | 31.378 | 392 | 235 | 12 | 20 | 392 | 34 | 410 | 1.98e-56 | 198 |
| Msa0979760 | MtrunA17_Chr3g0115131 | 32.234 | 394 | 228 | 13 | 16 | 387 | 79 | 455 | 3.91e-51 | 183 |
| Msa0979760 | MtrunA17_Chr7g0227141 | 65.625 | 64 | 22 | 0 | 22 | 85 | 5 | 68 | 9.95e-26 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979760 | AT3G01910.1 | 78.372 | 393 | 85 | 0 | 1 | 393 | 1 | 393 | 0.0 | 671 |
| Msa0979760 | AT3G01910.2 | 80.872 | 298 | 57 | 0 | 96 | 393 | 1 | 298 | 0.0 | 522 |
| Msa0979760 | AT3G01910.3 | 80.263 | 228 | 45 | 0 | 166 | 393 | 14 | 241 | 4.10e-140 | 399 |
| Msa0979760 | AT1G37130.1 | 32.426 | 404 | 217 | 15 | 16 | 387 | 107 | 486 | 4.26e-55 | 195 |
| Msa0979760 | AT1G77760.1 | 31.008 | 387 | 233 | 11 | 20 | 387 | 118 | 489 | 8.98e-55 | 194 |
Find 123 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTAGTGTCACTCAATT+TGG | 0.238406 | 6_4:-17042666 | Msa0979760:CDS |
| TTCAAGAACATCAGCCAATT+TGG | 0.244353 | 6_4:+17042707 | None:intergenic |
| CCATTACGTGTTGTTGTTCC+TGG | 0.268068 | 6_4:-17041621 | Msa0979760:CDS |
| GCAATAAGCGCTGAACGTTT+TGG | 0.305029 | 6_4:+17046030 | None:intergenic |
| GGATGGGATGTTTCTGCTAT+TGG | 0.307106 | 6_4:-17043415 | Msa0979760:CDS |
| AGGATGACGTGGTGGTTCTT+TGG | 0.317348 | 6_4:+17046165 | None:intergenic |
| GCAAGTAAAACATCTGCTTC+AGG | 0.330544 | 6_4:+17042457 | None:intergenic |
| AGAAAATGGAGGACCATATA+AGG | 0.331136 | 6_4:-17042509 | Msa0979760:CDS |
| CCAAATGGATTTCCCTGTTC+AGG | 0.332888 | 6_4:-17041366 | Msa0979760:intron |
| CAAACGTCTTCAACCTTCTC+AGG | 0.333719 | 6_4:+17039767 | None:intergenic |
| AATAATAAGAATACCTGAAC+AGG | 0.338083 | 6_4:+17041353 | None:intergenic |
| TGTTCCCACCATCAGTGAAT+TGG | 0.344491 | 6_4:-17041418 | Msa0979760:CDS |
| GCTGATGTTCTTGAACTTGT+TGG | 0.357661 | 6_4:-17042699 | Msa0979760:CDS |
| TCTGATGGTGCTGTTATTCC+TGG | 0.360868 | 6_4:+17046193 | None:intergenic |
| TGTTTGGGGTGGTGCCAAAT+TGG | 0.361546 | 6_4:-17042721 | Msa0979760:CDS |
| ATGATAAAGACAATGGTCTT+TGG | 0.361801 | 6_4:+17046272 | None:intergenic |
| GCAGTGTGTTATATGTTCTT+TGG | 0.362085 | 6_4:-17041176 | Msa0979760:intron |
| CTGAACAGGGAAATCCATTT+GGG | 0.369427 | 6_4:+17041367 | None:intergenic |
| GTTGTTGTTCCTGGTGTCAT+TGG | 0.374722 | 6_4:-17041612 | Msa0979760:CDS |
| CTTCGGATTTCTTCTATAAG+AGG | 0.375918 | 6_4:-17045993 | Msa0979760:CDS |
| ATCTTTCATATAGAGCTGTT+TGG | 0.386349 | 6_4:+17044930 | None:intergenic |
| CTGAGAAGGTTGAAGACGTT+TGG | 0.387433 | 6_4:-17039766 | Msa0979760:CDS |
| CCTGAACAGGGAAATCCATT+TGG | 0.389441 | 6_4:+17041366 | None:intergenic |
| AAGTGTTTAGTATCCCTCTA+AGG | 0.392556 | 6_4:+17039741 | None:intergenic |
| TTGGAGCTCGGTCTGTTAAA+TGG | 0.408474 | 6_4:-17041593 | Msa0979760:CDS |
| ACTATAACTTTGTTTCATCA+TGG | 0.411726 | 6_4:-17039502 | Msa0979760:three_prime_UTR |
| GAAATCCATTTGGGGTCTCC+TGG | 0.415935 | 6_4:+17041376 | None:intergenic |
| GAAGACGTTTGGAACCTTAG+AGG | 0.415954 | 6_4:-17039755 | Msa0979760:CDS |
| TAGCCTCTTAATAGGGATCA+TGG | 0.419878 | 6_4:-17041648 | Msa0979760:CDS |
| CAAGTAAAACATCTGCTTCA+GGG | 0.420172 | 6_4:+17042458 | None:intergenic |
| ACCCCTTCCCTTTAGCTCTA+GGG | 0.420296 | 6_4:+17039568 | None:intergenic |
| AACCCCTTCCCTTTAGCTCT+AGG | 0.420571 | 6_4:+17039567 | None:intergenic |
| GAGGGATACTAAACACTTCA+TGG | 0.421739 | 6_4:-17039736 | Msa0979760:CDS |
| AACAAATTGTGTCAGTGCGC+AGG | 0.422781 | 6_4:-17043484 | Msa0979760:intron |
| AGCTCTATATGAAAGATATC+AGG | 0.423766 | 6_4:-17044924 | Msa0979760:intron |
| ATATCATCAACGATGGGAAT+AGG | 0.431808 | 6_4:+17045961 | None:intergenic |
| ATCACGCCAACAGCGACAAA+TGG | 0.434013 | 6_4:-17040340 | Msa0979760:CDS |
| AGAGTAGATGTGTCTGTTGA+TGG | 0.438409 | 6_4:-17040422 | Msa0979760:CDS |
| TGAATAAGCCCTAGAGCTAA+AGG | 0.440607 | 6_4:-17039576 | Msa0979760:three_prime_UTR |
| GGACAGTGAAAGGGGTTGGA+TGG | 0.441148 | 6_4:-17043432 | Msa0979760:CDS |
| TGTAAGCATTGATAAGTGTA+AGG | 0.442162 | 6_4:-17042625 | Msa0979760:intron |
| AGTGGTATTGAAGCCTTATA+TGG | 0.442872 | 6_4:+17042496 | None:intergenic |
| TGTGTCAGTGCGCAGGGAAT+CGG | 0.442934 | 6_4:-17043477 | Msa0979760:intron |
| GTTCCCACCATCAGTGAATT+GGG | 0.444140 | 6_4:-17041417 | Msa0979760:CDS |
| TTCTTCTATAAGAGGAATCA+TGG | 0.447920 | 6_4:-17045985 | Msa0979760:CDS |
| GATGTTTCTGCTATTGGAAA+TGG | 0.450776 | 6_4:-17043409 | Msa0979760:intron |
| CCATCGTTGATGATATCAAC+AGG | 0.453731 | 6_4:-17045954 | Msa0979760:intron |
| TTAAATAAACTAACCTTCCC+AGG | 0.453737 | 6_4:+17041133 | None:intergenic |
| TCAGGGTTTCTTCATGCAAA+AGG | 0.454607 | 6_4:-17041450 | Msa0979760:intron |
| CAGGAACAACAACACGTAAT+GGG | 0.456347 | 6_4:+17041622 | None:intergenic |
| TTACTTGCTTATGAAATGAA+TGG | 0.458594 | 6_4:-17042442 | Msa0979760:CDS |
| TGCATCGTATGTTACACCTT+CGG | 0.464514 | 6_4:-17046010 | Msa0979760:CDS |
| AGATACTGTGTGGAAATATC+TGG | 0.467034 | 6_4:-17044967 | Msa0979760:CDS |
| TGAATTGGGACAATATTGAT+TGG | 0.469240 | 6_4:-17041403 | Msa0979760:CDS |
| CCACGCCCATTTGTCGCTGT+TGG | 0.476670 | 6_4:+17040334 | None:intergenic |
| GTGGAAATATCTGGTCTTGT+GGG | 0.479471 | 6_4:-17044958 | Msa0979760:CDS |
| TGAGTGACACTAGTCAACTT+TGG | 0.481166 | 6_4:+17042672 | None:intergenic |
| GCCGCATCAGGTGGTGGAAG+AGG | 0.481293 | 6_4:-17040452 | Msa0979760:CDS |
| TTCCTGGTGTCATTGGAGCT+CGG | 0.484478 | 6_4:-17041605 | Msa0979760:CDS |
| CCAGGAACAACAACACGTAA+TGG | 0.485436 | 6_4:+17041621 | None:intergenic |
| GACGTGAGCACAGTTAAGCC+TGG | 0.488918 | 6_4:-17041151 | Msa0979760:CDS |
| AGCTCGGTCTGTTAAATGGC+TGG | 0.490809 | 6_4:-17041589 | Msa0979760:CDS |
| TACCCATGATCCCTATTAAG+AGG | 0.490814 | 6_4:+17041645 | None:intergenic |
| GACAGTGAAAGGGGTTGGAT+GGG | 0.494113 | 6_4:-17043431 | Msa0979760:CDS |
| TCACGCCAACAGCGACAAAT+GGG | 0.495103 | 6_4:-17040339 | Msa0979760:CDS |
| TACTAAACACTTCATGGCAT+CGG | 0.499638 | 6_4:-17039730 | Msa0979760:CDS |
| ATTAGCGGTTATGCCGCATC+AGG | 0.500644 | 6_4:-17040464 | Msa0979760:CDS |
| GGCTTCAATACCACTCAGTC+AGG | 0.503512 | 6_4:-17042488 | Msa0979760:CDS |
| GAATAAGCCCTAGAGCTAAA+GGG | 0.509934 | 6_4:-17039575 | Msa0979760:three_prime_UTR |
| AAGACGTTTGGAACCTTAGA+GGG | 0.518434 | 6_4:-17039754 | Msa0979760:CDS |
| ACTAAACACTTCATGGCATC+GGG | 0.522528 | 6_4:-17039729 | Msa0979760:CDS |
| CACAGAGATTGTTGCGAAAG+CGG | 0.525917 | 6_4:-17040276 | Msa0979760:intron |
| ACTAGTGTCACTCAATTTGG+AGG | 0.530201 | 6_4:-17042663 | Msa0979760:CDS |
| ACAAGGACAGTGAAAGGGGT+TGG | 0.531891 | 6_4:-17043436 | Msa0979760:CDS |
| GCAAGACAAGGACAGTGAAA+GGG | 0.532744 | 6_4:-17043441 | Msa0979760:CDS |
| TTGTCCCAATTCACTGATGG+TGG | 0.536309 | 6_4:+17041413 | None:intergenic |
| AGCAAGACAAGGACAGTGAA+AGG | 0.537046 | 6_4:-17043442 | Msa0979760:CDS |
| TAATGTAACTGCCACCCTGC+AGG | 0.537332 | 6_4:-17043604 | Msa0979760:intron |
| AGCCTCTTAATAGGGATCAT+GGG | 0.538313 | 6_4:-17041647 | Msa0979760:CDS |
| ACAAATTGTGTCAGTGCGCA+GGG | 0.542397 | 6_4:-17043483 | Msa0979760:intron |
| TTGGAGTTGATTTGAAGAGA+AGG | 0.545819 | 6_4:+17046145 | None:intergenic |
| TATCATTGCAGAAGAATGCC+AGG | 0.560426 | 6_4:-17041556 | Msa0979760:intron |
| GTTCTCTCAGCTGTTTGGGG+TGG | 0.560970 | 6_4:-17042732 | Msa0979760:intron |
| TTCTCTTCAAATCAACTCCA+AGG | 0.562752 | 6_4:-17046143 | Msa0979760:intron |
| GGGTTTGCAGCCTGACTGAG+TGG | 0.563102 | 6_4:+17042478 | None:intergenic |
| GTCAACCAGGAGACCCCAAA+TGG | 0.569625 | 6_4:-17041381 | Msa0979760:CDS |
| AGCCCTAGAGCTAAAGGGAA+GGG | 0.570115 | 6_4:-17039570 | Msa0979760:three_prime_UTR |
| GGTTCTTTGGAATAATCTGA+TGG | 0.573482 | 6_4:+17046178 | None:intergenic |
| CCAACAGCGACAAATGGGCG+TGG | 0.575138 | 6_4:-17040334 | Msa0979760:CDS |
| TGCAAATGTTCAACCTGAGA+AGG | 0.578888 | 6_4:-17039780 | Msa0979760:CDS |
| TGTGGAAATATCTGGTCTTG+TGG | 0.579461 | 6_4:-17044959 | Msa0979760:CDS |
| GGTTATGCCGCATCAGGTGG+TGG | 0.585054 | 6_4:-17040458 | Msa0979760:CDS |
| GCCCTAGAGCTAAAGGGAAG+GGG | 0.585678 | 6_4:-17039569 | Msa0979760:three_prime_UTR |
| CTGTTGATGGAGGCAAAACA+TGG | 0.587993 | 6_4:-17040409 | Msa0979760:CDS |
| TTTGTTCTCTCAGCTGTTTG+GGG | 0.590503 | 6_4:-17042735 | Msa0979760:intron |
| ACGTGAGCACAGTTAAGCCT+GGG | 0.597879 | 6_4:-17041150 | Msa0979760:CDS |
| AGCGGTTATGCCGCATCAGG+TGG | 0.603869 | 6_4:-17040461 | Msa0979760:CDS |
| TGATGGAGGCAAAACATGGA+TGG | 0.604155 | 6_4:-17040405 | Msa0979760:CDS |
| GTGGCAGTTACATTATACTT+CGG | 0.605427 | 6_4:+17043612 | None:intergenic |
| CAAGACAAGGACAGTGAAAG+GGG | 0.612810 | 6_4:-17043440 | Msa0979760:CDS |
| GCCTCTTCCACCACCTGATG+CGG | 0.613306 | 6_4:+17040451 | None:intergenic |
| GTCAGTGCGCAGGGAATCGG+AGG | 0.613554 | 6_4:-17043474 | Msa0979760:intron |
| ACAATATTGATTGGTCAACC+AGG | 0.617652 | 6_4:-17041394 | Msa0979760:CDS |
| CCTGTTGATATCATCAACGA+TGG | 0.620773 | 6_4:+17045954 | None:intergenic |
| CAACAGCGACAAATGGGCGT+GGG | 0.623258 | 6_4:-17040333 | Msa0979760:CDS |
| ATATTGTCCCAATTCACTGA+TGG | 0.623469 | 6_4:+17041410 | None:intergenic |
| GAAAGAGATGATAAAGACAA+TGG | 0.626137 | 6_4:+17046265 | None:intergenic |
| GACCGAGCTCCAATGACACC+AGG | 0.633741 | 6_4:+17041603 | None:intergenic |
| CTGTTGATATCATCAACGAT+GGG | 0.640040 | 6_4:+17045955 | None:intergenic |
| CTCTTATAGAAGAAATCCGA+AGG | 0.641885 | 6_4:+17045994 | None:intergenic |
| TGTCCCAATTCACTGATGGT+GGG | 0.643984 | 6_4:+17041414 | None:intergenic |
| GAGCACAGTTAAGCCTGGGA+AGG | 0.652581 | 6_4:-17041146 | Msa0979760:intron |
| AAGCCCTAGAGCTAAAGGGA+AGG | 0.657196 | 6_4:-17039571 | Msa0979760:three_prime_UTR |
| CAAGAGAACACATACCTGCA+GGG | 0.665066 | 6_4:+17043590 | None:intergenic |
| TGAAGAGAAGGATGACGTGG+TGG | 0.668281 | 6_4:+17046157 | None:intergenic |
| TTAGTGTGAGATAATAAACA+TGG | 0.675473 | 6_4:-17039477 | Msa0979760:three_prime_UTR |
| GTAGATGTGTCTGTTGATGG+AGG | 0.695577 | 6_4:-17040419 | Msa0979760:CDS |
| GGACTGCTATGAGCAAGACA+AGG | 0.699935 | 6_4:-17043453 | Msa0979760:CDS |
| TGAACAGGGAAATCCATTTG+GGG | 0.713949 | 6_4:+17041368 | None:intergenic |
| ATAATAAGAATACCTGAACA+GGG | 0.725250 | 6_4:+17041354 | None:intergenic |
| ATTTGAAGAGAAGGATGACG+TGG | 0.734477 | 6_4:+17046154 | None:intergenic |
| ATTTATGAACAGATACTGTG+TGG | 0.735860 | 6_4:-17044977 | Msa0979760:intron |
| GAGAACACATACCTGCAGGG+TGG | 0.768733 | 6_4:+17043593 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTAGTATTATAGTA+TGG | - | chr6_4:17039863-17039882 | Msa0979760:intron | 10.0% |
| !!! | TAATTTTTTTAAAGATCAAA+AGG | + | chr6_4:17043206-17043225 | None:intergenic | 10.0% |
| !!! | TTTTGATCTTTAAAAAAATT+AGG | - | chr6_4:17043205-17043224 | Msa0979760:intron | 10.0% |
| !! | AAAAACAGTATAAAAATAAA+AGG | + | chr6_4:17043385-17043404 | None:intergenic | 10.0% |
| !! | ATAGTGTTAATAAAAAAATT+AGG | - | chr6_4:17043546-17043565 | Msa0979760:intron | 10.0% |
| !! | AATAGTGTTAATAAAAAATT+AGG | - | chr6_4:17043766-17043785 | Msa0979760:intron | 10.0% |
| !! | TTAATTCAATTAAGTTAACA+AGG | - | chr6_4:17040084-17040103 | Msa0979760:intron | 15.0% |
| !! | TAATTCAATTAAGTTAACAA+GGG | - | chr6_4:17040085-17040104 | Msa0979760:intron | 15.0% |
| !!! | TTTTTTAATTGAGATAACAT+GGG | - | chr6_4:17040368-17040387 | Msa0979760:CDS | 15.0% |
| !!! | ATTTATTATTATGACTAGTT+TGG | - | chr6_4:17040737-17040756 | Msa0979760:intron | 15.0% |
| !! | TAAAACAATTAAAACAAGAA+GGG | + | chr6_4:17041167-17041186 | None:intergenic | 15.0% |
| !!! | TTTTATATAAGAACTAATTG+TGG | - | chr6_4:17041267-17041286 | Msa0979760:intron | 15.0% |
| !! | TTTCCAATTAAAAAAAATGA+AGG | - | chr6_4:17041498-17041517 | Msa0979760:intron | 15.0% |
| !!! | TTACCTTCATTTTTTTTAAT+TGG | + | chr6_4:17041504-17041523 | None:intergenic | 15.0% |
| !! | TATTTATGCAATTAGAAAAT+GGG | - | chr6_4:17041867-17041886 | Msa0979760:intron | 15.0% |
| !!! | TTAGTTTTTGTATTGATTTT+AGG | - | chr6_4:17042212-17042231 | Msa0979760:intron | 15.0% |
| !! | TAAAAAAATTAGGAAGAAAA+TGG | - | chr6_4:17043215-17043234 | Msa0979760:intron | 15.0% |
| !!! | AATACCAAATTTTTCATTTT+CGG | - | chr6_4:17044233-17044252 | Msa0979760:intron | 15.0% |
| !!! | TTAAGTTGTTTATATAAACA+TGG | + | chr6_4:17044946-17044965 | None:intergenic | 15.0% |
| !! | CTTATATATAAACACTTATA+TGG | + | chr6_4:17044980-17044999 | None:intergenic | 15.0% |
| !!! | GTTTATAGTTTTTATGAAAA+TGG | + | chr6_4:17045037-17045056 | None:intergenic | 15.0% |
| !!! | CAAAGGTATATTAATTATTA+AGG | + | chr6_4:17045915-17045934 | None:intergenic | 15.0% |
| !! | ATATGTTGAGTAAAAAATAG+CGG | - | chr6_4:17039893-17039912 | Msa0979760:intron | 20.0% |
| !! | TATTTGATAAGCTATCTTAT+CGG | - | chr6_4:17039917-17039936 | Msa0979760:intron | 20.0% |
| !! | TTATATTTGGCAAAAAATAG+CGG | - | chr6_4:17040177-17040196 | Msa0979760:intron | 20.0% |
| !!! | GTTTTTTAATTGAGATAACA+TGG | - | chr6_4:17040367-17040386 | Msa0979760:CDS | 20.0% |
| !! | GTGTTGTGTATATAAATTAA+GGG | + | chr6_4:17040579-17040598 | None:intergenic | 20.0% |
| !! | AGTGTTGTGTATATAAATTA+AGG | + | chr6_4:17040580-17040599 | None:intergenic | 20.0% |
| !!! | CTCTTAATATTTTTTTACAC+TGG | - | chr6_4:17040598-17040617 | Msa0979760:intron | 20.0% |
| !!! | TTAATATTTTTTTACACTGG+CGG | - | chr6_4:17040601-17040620 | Msa0979760:intron | 20.0% |
| !! | AATAAGCTGAAATCAATTTA+TGG | + | chr6_4:17040978-17040997 | None:intergenic | 20.0% |
| !! | ATTAATCACTTATAGCATAA+GGG | + | chr6_4:17041111-17041130 | None:intergenic | 20.0% |
| !! | CTAAAACAATTAAAACAAGA+AGG | + | chr6_4:17041168-17041187 | None:intergenic | 20.0% |
| !! | CTATTTATGCAATTAGAAAA+TGG | - | chr6_4:17041866-17041885 | Msa0979760:intron | 20.0% |
| !! | ATTTATGCAATTAGAAAATG+GGG | - | chr6_4:17041868-17041887 | Msa0979760:intron | 20.0% |
| !!! | AAGTAACATTGTTATTTTGA+TGG | - | chr6_4:17042093-17042112 | Msa0979760:intron | 20.0% |
| !! | TCAAATAAGAAAATCAAAAC+AGG | - | chr6_4:17042928-17042947 | Msa0979760:intron | 20.0% |
| !! | AATTCAACATGTTATATTAG+TGG | - | chr6_4:17043594-17043613 | Msa0979760:intron | 20.0% |
| !! | AATTCAACATGTTATATTAG+TGG | - | chr6_4:17043594-17043613 | Msa0979760:intron | 20.0% |
| !!! | AGTCATTTTGAATTCAAAAA+AGG | - | chr6_4:17043917-17043936 | Msa0979760:intron | 20.0% |
| !! | TTCACATTATTATGTATATC+AGG | - | chr6_4:17044270-17044289 | Msa0979760:intron | 20.0% |
| !! | TCACATTATTATGTATATCA+GGG | - | chr6_4:17044271-17044290 | Msa0979760:intron | 20.0% |
| !! | CAATTAACTCAAATTAAGAA+AGG | + | chr6_4:17044423-17044442 | None:intergenic | 20.0% |
| !! | GAAAACTGAAAAAATAGAAA+AGG | + | chr6_4:17044682-17044701 | None:intergenic | 20.0% |
| !! | AAAATGAAAGACATTATTTC+TGG | - | chr6_4:17044800-17044819 | Msa0979760:intron | 20.0% |
| !! | AAACTAGAAAAATGACAATT+AGG | + | chr6_4:17045505-17045524 | None:intergenic | 20.0% |
| !! | TATACCTTTGTATAATTTAC+AGG | - | chr6_4:17045925-17045944 | Msa0979760:intron | 20.0% |
| !!! | GTTAAGACTTTTTATACAAT+TGG | + | chr6_4:17046141-17046160 | None:intergenic | 20.0% |
| ! | AGTTTATTGTAGTAAGCTAT+AGG | - | chr6_4:17040154-17040173 | Msa0979760:intron | 25.0% |
| ! | AGTAAGCTATAGGTTATATT+TGG | - | chr6_4:17040164-17040183 | Msa0979760:intron | 25.0% |
| ! | TGTGTATATAAATTAAGGGT+AGG | + | chr6_4:17040575-17040594 | None:intergenic | 25.0% |
| !!! | TTAGTTAATTTGTCGTCTTT+TGG | - | chr6_4:17040837-17040856 | Msa0979760:intron | 25.0% |
| !!! | TAGTTAATTTGTCGTCTTTT+GGG | - | chr6_4:17040838-17040857 | Msa0979760:intron | 25.0% |
| ! | TTAGAATTCAGAATTCAGTT+AGG | - | chr6_4:17040864-17040883 | Msa0979760:intron | 25.0% |
| !! | AATTCAGTTAGGATTTTCTT+AGG | - | chr6_4:17040875-17040894 | Msa0979760:intron | 25.0% |
| !! | ATTCAGTTAGGATTTTCTTA+GGG | - | chr6_4:17040876-17040895 | Msa0979760:intron | 25.0% |
| ! | CATAAACTATTTAGAGAGTA+TGG | + | chr6_4:17041002-17041021 | None:intergenic | 25.0% |
| ! | CATTAATCACTTATAGCATA+AGG | + | chr6_4:17041112-17041131 | None:intergenic | 25.0% |
| ! | CTGGAAAAATGTTTATAACT+GGG | - | chr6_4:17041317-17041336 | Msa0979760:intron | 25.0% |
| !! | TCACTTGTAAACATTGTTTT+GGG | + | chr6_4:17041393-17041412 | None:intergenic | 25.0% |
| ! | TTTGTATATATGCAGATGAT+TGG | - | chr6_4:17041545-17041564 | Msa0979760:intron | 25.0% |
| !! | CTTTTTCTAAACAAACAAAC+TGG | + | chr6_4:17041629-17041648 | None:intergenic | 25.0% |
| ! | AAAGTGAAAAACAGTTATTC+TGG | - | chr6_4:17041746-17041765 | Msa0979760:intron | 25.0% |
| ! | TTTATGCAATTAGAAAATGG+GGG | - | chr6_4:17041869-17041888 | Msa0979760:intron | 25.0% |
| ! | CCAACAAATCAATAATTTAG+CGG | + | chr6_4:17042042-17042061 | None:intergenic | 25.0% |
| ! | TATTAAATTCTTGTGATGCA+AGG | - | chr6_4:17042070-17042089 | Msa0979760:intron | 25.0% |
| ! | TTGTAGTATAATGTTGTGTT+TGG | - | chr6_4:17042358-17042377 | Msa0979760:intron | 25.0% |
| ! | AAATAAGCTGTAAATGCTTA+TGG | - | chr6_4:17042839-17042858 | Msa0979760:intron | 25.0% |
| ! | AGTGTAAGGTAATGATTAAT+TGG | - | chr6_4:17043127-17043146 | Msa0979760:intron | 25.0% |
| ! | AAAAATTAGGAAGAAAATGG+AGG | - | chr6_4:17043218-17043237 | Msa0979760:intron | 25.0% |
| ! | TTACTTGCTTATGAAATGAA+TGG | - | chr6_4:17043296-17043315 | Msa0979760:intron | 25.0% |
| !!! | GTTCTTGTTTTTTTATCTCT+TGG | - | chr6_4:17043337-17043356 | Msa0979760:intron | 25.0% |
| !!! | TTATTTTTTGTTTGTCCTCT+AGG | - | chr6_4:17043411-17043430 | Msa0979760:CDS | 25.0% |
| !! | TTTTTCTTTAGCCTCTTAAT+AGG | - | chr6_4:17044082-17044101 | Msa0979760:intron | 25.0% |
| !! | TTTTCTTTAGCCTCTTAATA+GGG | - | chr6_4:17044083-17044102 | Msa0979760:intron | 25.0% |
| ! | CATTCCGAAAATGAAAAATT+TGG | + | chr6_4:17044240-17044259 | None:intergenic | 25.0% |
| ! | ATAATAATGTGAAGCTCTTA+GGG | + | chr6_4:17044263-17044282 | None:intergenic | 25.0% |
| ! | ATAATAAGAATACCTGAACA+GGG | + | chr6_4:17044387-17044406 | None:intergenic | 25.0% |
| ! | AATAATAAGAATACCTGAAC+AGG | + | chr6_4:17044388-17044407 | None:intergenic | 25.0% |
| !! | AATGATGATGTGTATATGAT+AGG | - | chr6_4:17044626-17044645 | Msa0979760:intron | 25.0% |
| ! | GGAAATCAAATATATACAAG+AGG | + | chr6_4:17044850-17044869 | None:intergenic | 25.0% |
| ! | TTGATTTCCAAATTTCCATT+AGG | - | chr6_4:17044861-17044880 | Msa0979760:intron | 25.0% |
| ! | TGATTTCCAAATTTCCATTA+GGG | - | chr6_4:17044862-17044881 | Msa0979760:intron | 25.0% |
| ! | TCAAAAAAGGCAATTAAAAC+AGG | - | chr6_4:17045188-17045207 | Msa0979760:intron | 25.0% |
| ! | ATATGTGCAATAGTTATAGT+CGG | + | chr6_4:17045785-17045804 | None:intergenic | 25.0% |
| ! | AAATGAGTTCATTTGCATTA+TGG | - | chr6_4:17045840-17045859 | Msa0979760:intron | 25.0% |
| ! | TCTACCTGTAAATTATACAA+AGG | + | chr6_4:17045932-17045951 | None:intergenic | 25.0% |
| !! | ACTATAACTTTGTTTCATCA+TGG | - | chr6_4:17046236-17046255 | Msa0979760:five_prime_UTR | 25.0% |
| ! | TTAGTGTGAGATAATAAACA+TGG | - | chr6_4:17046261-17046280 | Msa0979760:five_prime_UTR | 25.0% |
| ATGATAAAGACAATGGTCTT+TGG | + | chr6_4:17039469-17039488 | None:intergenic | 30.0% | |
| GAAAGAGATGATAAAGACAA+TGG | + | chr6_4:17039476-17039495 | None:intergenic | 30.0% | |
| ATGAAAAAACAGTGAGTTAG+TGG | + | chr6_4:17039503-17039522 | None:intergenic | 30.0% | |
| ! | AAGAAAGAGAAAGAGTATGT+TGG | + | chr6_4:17039637-17039656 | None:intergenic | 30.0% |
| TTCTTCTATAAGAGGAATCA+TGG | - | chr6_4:17039753-17039772 | Msa0979760:CDS | 30.0% | |
| CGGATTGAATTTGTAGTATT+TGG | - | chr6_4:17039985-17040004 | Msa0979760:intron | 30.0% | |
| GTAGTATTTGGTTGAATTAG+CGG | - | chr6_4:17039997-17040016 | Msa0979760:intron | 30.0% | |
| TCCACTTTATGCTAACTTAT+TGG | + | chr6_4:17040207-17040226 | None:intergenic | 30.0% | |
| CCAAACACTACAAATTCAAT+CGG | + | chr6_4:17040279-17040298 | None:intergenic | 30.0% | |
| AGCTTCAAAAAACGATAAGT+CGG | - | chr6_4:17040433-17040452 | Msa0979760:CDS | 30.0% | |
| TCGATAAATCACAACAAATG+TGG | + | chr6_4:17040677-17040696 | None:intergenic | 30.0% | |
| ATTTATGAACAGATACTGTG+TGG | - | chr6_4:17040761-17040780 | Msa0979760:intron | 30.0% | |
| ATCTTTCATATAGAGCTGTT+TGG | + | chr6_4:17040811-17040830 | None:intergenic | 30.0% | |
| AGCTCTATATGAAAGATATC+AGG | - | chr6_4:17040814-17040833 | Msa0979760:intron | 30.0% | |
| CAATTTATTTCCAGTCTCAA+TGG | + | chr6_4:17040947-17040966 | None:intergenic | 30.0% | |
| TGAAGTTGCTTATCGAAAAT+TGG | - | chr6_4:17041130-17041149 | Msa0979760:intron | 30.0% | |
| ! | GTGATTATTGTTGTTCTTTC+AGG | - | chr6_4:17041205-17041224 | Msa0979760:intron | 30.0% |
| ! | CCAGTTATAAACATTTTTCC+AGG | + | chr6_4:17041319-17041338 | None:intergenic | 30.0% |
| CCTGGAAAAATGTTTATAAC+TGG | - | chr6_4:17041316-17041335 | Msa0979760:intron | 30.0% | |
| ! | CTCACTTGTAAACATTGTTT+TGG | + | chr6_4:17041394-17041413 | None:intergenic | 30.0% |
| ACATTTACTATCTTTCAAGC+CGG | - | chr6_4:17041416-17041435 | Msa0979760:CDS | 30.0% | |
| ! | AAAGTCTAAGGATTTGAGTT+TGG | + | chr6_4:17041466-17041485 | None:intergenic | 30.0% |
| AATAGCTTCTACAAAGTCTA+AGG | + | chr6_4:17041478-17041497 | None:intergenic | 30.0% | |
| TGCATATATACAAACTACAG+AGG | + | chr6_4:17041539-17041558 | None:intergenic | 30.0% | |
| TATATATGCAGATGATTGGT+AGG | - | chr6_4:17041549-17041568 | Msa0979760:intron | 30.0% | |
| ATATATGCAGATGATTGGTA+GGG | - | chr6_4:17041550-17041569 | Msa0979760:intron | 30.0% | |
| !!! | GGTTTTATTAAAGAGAAGTG+AGG | + | chr6_4:17041597-17041616 | None:intergenic | 30.0% |
| ! | AAAGTGCTTACTTAAAACCT+TGG | - | chr6_4:17041645-17041664 | Msa0979760:CDS | 30.0% |
| AAACAGTTATTCTGGATACT+CGG | - | chr6_4:17041754-17041773 | Msa0979760:intron | 30.0% | |
| AATTAAGCACCTATTCCATA+AGG | - | chr6_4:17041808-17041827 | Msa0979760:intron | 30.0% | |
| ATAGTAACCATATGTCCTTA+TGG | + | chr6_4:17041826-17041845 | None:intergenic | 30.0% | |
| ATAAGGACATATGGTTACTA+TGG | - | chr6_4:17041825-17041844 | Msa0979760:intron | 30.0% | |
| !! | CCGCTAAATTATTGATTTGT+TGG | - | chr6_4:17042039-17042058 | Msa0979760:intron | 30.0% |
| !!! | AACATTGTTATTTTGATGGC+AGG | - | chr6_4:17042097-17042116 | Msa0979760:intron | 30.0% |
| TAATCCTATATCCTCGAAAT+AGG | - | chr6_4:17042441-17042460 | Msa0979760:CDS | 30.0% | |
| AATCCTATATCCTCGAAATA+GGG | - | chr6_4:17042442-17042461 | Msa0979760:CDS | 30.0% | |
| !! | AAAGGGTTGAATTTTAACAG+TGG | - | chr6_4:17042469-17042488 | Msa0979760:CDS | 30.0% |
| !! | TTAAGTTGAACATCCAAACA+AGG | + | chr6_4:17042703-17042722 | None:intergenic | 30.0% |
| ! | ACTATTTTCATAACCTATCC+TGG | - | chr6_4:17042805-17042824 | Msa0979760:intron | 30.0% |
| !! | TGTAAGCATTGATAAGTGTA+AGG | - | chr6_4:17043113-17043132 | Msa0979760:intron | 30.0% |
| AAGATCAAAAGGAGTCAATA+AGG | + | chr6_4:17043195-17043214 | None:intergenic | 30.0% | |
| ! | GAATTCTGTTTGCTGATATT+AGG | - | chr6_4:17043634-17043653 | Msa0979760:intron | 30.0% |
| GCTGATATTAGGACATAATT+AGG | - | chr6_4:17043645-17043664 | Msa0979760:intron | 30.0% | |
| ATTAGGACATAATTAGGTGA+TGG | - | chr6_4:17043651-17043670 | Msa0979760:intron | 30.0% | |
| ! | GAATTCTGTTTGCTGATATT+AGG | - | chr6_4:17043634-17043653 | Msa0979760:intron | 30.0% |
| GCTGATATTAGGACATAATT+AGG | - | chr6_4:17043645-17043664 | Msa0979760:intron | 30.0% | |
| ! | TTCATTTTCTTCTTCCTCTT+CGG | - | chr6_4:17044033-17044052 | Msa0979760:intron | 30.0% |
| CATAATAATGTGAAGCTCTT+AGG | + | chr6_4:17044264-17044283 | None:intergenic | 30.0% | |
| TGAATTGGGACAATATTGAT+TGG | - | chr6_4:17044335-17044354 | Msa0979760:intron | 30.0% | |
| !! | ACTTACTCTAAAGTACAAAC+TGG | + | chr6_4:17044453-17044472 | None:intergenic | 30.0% |
| ATGAGTATTTGTTTCCTTGT+GGG | - | chr6_4:17044540-17044559 | Msa0979760:intron | 30.0% | |
| TTAAATAAACTAACCTTCCC+AGG | + | chr6_4:17044608-17044627 | None:intergenic | 30.0% | |
| TTATGTCCCTAATGGAAATT+TGG | + | chr6_4:17044871-17044890 | None:intergenic | 30.0% | |
| CATCAAATTTATGTCCCTAA+TGG | + | chr6_4:17044879-17044898 | None:intergenic | 30.0% | |
| TGTGTCATATTGGAAAACAA+AGG | + | chr6_4:17044902-17044921 | None:intergenic | 30.0% | |
| TCAGTAGCTAATCTCAAAAA+AGG | - | chr6_4:17045175-17045194 | Msa0979760:intron | 30.0% | |
| GCCTCAAGATATCAAAAAAA+AGG | - | chr6_4:17045358-17045377 | Msa0979760:intron | 30.0% | |
| !!! | GCCTTTTTTTTGATATCTTG+AGG | + | chr6_4:17045362-17045381 | None:intergenic | 30.0% |
| CATATAAGATCACGATGATA+TGG | - | chr6_4:17045589-17045608 | Msa0979760:intron | 30.0% | |
| TCTTTAGTACTCTTGTTAGT+AGG | - | chr6_4:17045617-17045636 | Msa0979760:intron | 30.0% | |
| AATCGTACATGACCAATTAA+TGG | - | chr6_4:17045758-17045777 | Msa0979760:intron | 30.0% | |
| ATCGTACATGACCAATTAAT+GGG | - | chr6_4:17045759-17045778 | Msa0979760:intron | 30.0% | |
| GAAATCATCGAACAAATAGT+TGG | + | chr6_4:17046075-17046094 | None:intergenic | 30.0% | |
| ! | GTTATTCCTGGCATTGTTTT+TGG | + | chr6_4:17039536-17039555 | None:intergenic | 35.0% |
| !! | GGTTCTTTGGAATAATCTGA+TGG | + | chr6_4:17039563-17039582 | None:intergenic | 35.0% |
| !! | TTGGAGTTGATTTGAAGAGA+AGG | + | chr6_4:17039596-17039615 | None:intergenic | 35.0% |
| TTCTCTTCAAATCAACTCCA+AGG | - | chr6_4:17039595-17039614 | Msa0979760:three_prime_UTR | 35.0% | |
| GTGTGATTGATTGATTACCT+TGG | + | chr6_4:17039615-17039634 | None:intergenic | 35.0% | |
| !!! | TTCTAATCGTCGTTTTTCAC+AGG | - | chr6_4:17039668-17039687 | Msa0979760:intron | 35.0% |
| CTCTTATAGAAGAAATCCGA+AGG | + | chr6_4:17039747-17039766 | None:intergenic | 35.0% | |
| CTTCGGATTTCTTCTATAAG+AGG | - | chr6_4:17039745-17039764 | Msa0979760:CDS | 35.0% | |
| ATATCATCAACGATGGGAAT+AGG | + | chr6_4:17039780-17039799 | None:intergenic | 35.0% | |
| CTGTTGATATCATCAACGAT+GGG | + | chr6_4:17039786-17039805 | None:intergenic | 35.0% | |
| !! | GTTGATGATATCAACAGGTT+CGG | - | chr6_4:17039789-17039808 | Msa0979760:CDS | 35.0% |
| CTTATCGGATGAACTTATAG+CGG | - | chr6_4:17039932-17039951 | Msa0979760:intron | 35.0% | |
| GCCAATAAGTTAGCATAAAG+TGG | - | chr6_4:17040203-17040222 | Msa0979760:intron | 35.0% | |
| CCGATTGAATTTGTAGTGTT+TGG | - | chr6_4:17040276-17040295 | Msa0979760:intron | 35.0% | |
| GTAGTGTTTGGTAAGATTAG+CGG | - | chr6_4:17040288-17040307 | Msa0979760:CDS | 35.0% | |
| AGATACTGTGTGGAAATATC+TGG | - | chr6_4:17040771-17040790 | Msa0979760:intron | 35.0% | |
| ACATAAACAACCATTGAGAC+TGG | - | chr6_4:17040934-17040953 | Msa0979760:intron | 35.0% | |
| ! | TATTGTTGTTCTTTCAGGAG+AGG | - | chr6_4:17041210-17041229 | Msa0979760:intron | 35.0% |
| ! | ATTGTTGTTCTTTCAGGAGA+GGG | - | chr6_4:17041211-17041230 | Msa0979760:intron | 35.0% |
| GGGCCATATTAGATAAGATA+TGG | - | chr6_4:17041367-17041386 | Msa0979760:CDS | 35.0% | |
| GGGCCATATCTTATCTAATA+TGG | + | chr6_4:17041373-17041392 | None:intergenic | 35.0% | |
| TATATGCAGATGATTGGTAG+GGG | - | chr6_4:17041551-17041570 | Msa0979760:intron | 35.0% | |
| AACAGTTATTCTGGATACTC+GGG | - | chr6_4:17041755-17041774 | Msa0979760:intron | 35.0% | |
| TGGATACTCGGGATAAATTA+GGG | - | chr6_4:17041766-17041785 | Msa0979760:intron | 35.0% | |
| ACCTATTCCATAAGGACATA+TGG | - | chr6_4:17041816-17041835 | Msa0979760:intron | 35.0% | |
| ACCATATGTCCTTATGGAAT+AGG | + | chr6_4:17041820-17041839 | None:intergenic | 35.0% | |
| ! | TCAATAATTTAGCGGACGTT+TGG | + | chr6_4:17042034-17042053 | None:intergenic | 35.0% |
| GTGGCAGTTACATTATACTT+CGG | + | chr6_4:17042129-17042148 | None:intergenic | 35.0% | |
| !! | CTTGCTAGCTTTGATTGAAA+TGG | - | chr6_4:17042167-17042186 | Msa0979760:intron | 35.0% |
| CTTTGATTGAAATGGAGCAT+TGG | - | chr6_4:17042175-17042194 | Msa0979760:intron | 35.0% | |
| !!! | AAATGGAGCATTGGTTGTTT+TGG | - | chr6_4:17042184-17042203 | Msa0979760:intron | 35.0% |
| ! | GATGTTTCTGCTATTGGAAA+TGG | - | chr6_4:17042329-17042348 | Msa0979760:intron | 35.0% |
| TTAGGCCAGAGTCTTTATAT+TGG | + | chr6_4:17042532-17042551 | None:intergenic | 35.0% | |
| AATATAAAGACTCTGGCCTA+AGG | - | chr6_4:17042531-17042550 | Msa0979760:intron | 35.0% | |
| ATATAAAGACTCTGGCCTAA+GGG | - | chr6_4:17042532-17042551 | Msa0979760:intron | 35.0% | |
| ! | TCTTAGACCTTTTATGAGTC+AGG | - | chr6_4:17042570-17042589 | Msa0979760:intron | 35.0% |
| ! | CTTAGACCTTTTATGAGTCA+GGG | - | chr6_4:17042571-17042590 | Msa0979760:intron | 35.0% |
| TAACTACCCTGACTCATAAA+AGG | + | chr6_4:17042580-17042599 | None:intergenic | 35.0% | |
| ! | TTTTATGAGTCAGGGTAGTT+AGG | - | chr6_4:17042579-17042598 | Msa0979760:intron | 35.0% |
| ACTTGTATTTGATCTCTGGA+TGG | - | chr6_4:17042626-17042645 | Msa0979760:CDS | 35.0% | |
| TCTCTAGCTAAGCATTCAAA+GGG | + | chr6_4:17042677-17042696 | None:intergenic | 35.0% | |
| ! | TTTTTGTTCTCTCAGCTGTT+TGG | - | chr6_4:17043001-17043020 | Msa0979760:intron | 35.0% |
| ! | TTTTGTTCTCTCAGCTGTTT+GGG | - | chr6_4:17043002-17043021 | Msa0979760:intron | 35.0% |
| TTCAAGAACATCAGCCAATT+TGG | + | chr6_4:17043034-17043053 | None:intergenic | 35.0% | |
| ! | TTGACTAGTGTCACTCAATT+TGG | - | chr6_4:17043072-17043091 | Msa0979760:intron | 35.0% |
| !!! | ATTGGCTTGTGTATGTTTTC+TGG | - | chr6_4:17043145-17043164 | Msa0979760:intron | 35.0% |
| AGAAAATGGAGGACCATATA+AGG | - | chr6_4:17043229-17043248 | Msa0979760:intron | 35.0% | |
| ! | AGTGGTATTGAAGCCTTATA+TGG | + | chr6_4:17043245-17043264 | None:intergenic | 35.0% |
| CAAGTAAAACATCTGCTTCA+GGG | + | chr6_4:17043283-17043302 | None:intergenic | 35.0% | |
| AATACGTCATATATCAGACC+TGG | + | chr6_4:17044203-17044222 | None:intergenic | 35.0% | |
| ATATTGTCCCAATTCACTGA+TGG | + | chr6_4:17044331-17044350 | None:intergenic | 35.0% | |
| ! | ACAATATTGATTGGTCAACC+AGG | - | chr6_4:17044344-17044363 | Msa0979760:intron | 35.0% |
| GATGAGTATTTGTTTCCTTG+TGG | - | chr6_4:17044539-17044558 | Msa0979760:intron | 35.0% | |
| GCAGTGTGTTATATGTTCTT+TGG | - | chr6_4:17044562-17044581 | Msa0979760:intron | 35.0% | |
| ! | TAGTCTTGCTTGTGTCATAT+TGG | + | chr6_4:17044912-17044931 | None:intergenic | 35.0% |
| AAGCTGTTATGAAGAGCTTA+TGG | - | chr6_4:17045066-17045085 | Msa0979760:intron | 35.0% | |
| AAGCTGTTATGAAGAGCTTA+TGG | - | chr6_4:17045066-17045085 | Msa0979760:intron | 35.0% | |
| GTTGACTAAAGTCCTAATTC+TGG | - | chr6_4:17045231-17045250 | Msa0979760:intron | 35.0% | |
| TATGACACTGTCGAGATATT+TGG | - | chr6_4:17045532-17045551 | Msa0979760:intron | 35.0% | |
| TTTGGAGAGAGAAAATCTGA+TGG | - | chr6_4:17045550-17045569 | Msa0979760:intron | 35.0% | |
| ! | GTAGGCATGTTTCTAAATTG+CGG | - | chr6_4:17045635-17045654 | Msa0979760:intron | 35.0% |
| ! | TGCATTTTGCTGCAATATCA+AGG | + | chr6_4:17045691-17045710 | None:intergenic | 35.0% |
| AGCTGCAATTATAGTAGAGT+CGG | - | chr6_4:17045710-17045729 | Msa0979760:intron | 35.0% | |
| TCATTTGCATTATGGATCAG+AGG | - | chr6_4:17045848-17045867 | Msa0979760:intron | 35.0% | |
| AATCACCACTCTAATTGAGT+TGG | - | chr6_4:17045872-17045891 | Msa0979760:intron | 35.0% | |
| ATCACCACTCTAATTGAGTT+GGG | - | chr6_4:17045873-17045892 | Msa0979760:intron | 35.0% | |
| AAGTGTTTAGTATCCCTCTA+AGG | + | chr6_4:17046000-17046019 | None:intergenic | 35.0% | |
| TACTAAACACTTCATGGCAT+CGG | - | chr6_4:17046008-17046027 | Msa0979760:CDS | 35.0% | |
| CAATCTCCAAAAACAATGCC+AGG | - | chr6_4:17039527-17039546 | Msa0979760:three_prime_UTR | 40.0% | |
| ATTTGAAGAGAAGGATGACG+TGG | + | chr6_4:17039587-17039606 | None:intergenic | 40.0% | |
| TGCATCGTATGTTACACCTT+CGG | - | chr6_4:17039728-17039747 | Msa0979760:CDS | 40.0% | |
| CCTGTTGATATCATCAACGA+TGG | + | chr6_4:17039787-17039806 | None:intergenic | 40.0% | |
| !! | CCATCGTTGATGATATCAAC+AGG | - | chr6_4:17039784-17039803 | Msa0979760:CDS | 40.0% |
| ! | GTTTAGAGCAGATAAGCTAG+CGG | - | chr6_4:17039965-17039984 | Msa0979760:intron | 40.0% |
| !! | TGTGGAAATATCTGGTCTTG+TGG | - | chr6_4:17040779-17040798 | Msa0979760:intron | 40.0% |
| !! | GTGGAAATATCTGGTCTTGT+GGG | - | chr6_4:17040780-17040799 | Msa0979760:intron | 40.0% |
| ! | GGATTTTCTTAGGGTCGATT+TGG | - | chr6_4:17040885-17040904 | Msa0979760:intron | 40.0% |
| CTGCATATCCACAATACACT+GGG | - | chr6_4:17041347-17041366 | Msa0979760:intron | 40.0% | |
| TAATATGGCCCAGTGTATTG+TGG | + | chr6_4:17041358-17041377 | None:intergenic | 40.0% | |
| !! | TATCTTTCAAGCCGGTTTTG+TGG | - | chr6_4:17041424-17041443 | Msa0979760:CDS | 40.0% |
| !! | ATCTTTCAAGCCGGTTTTGT+GGG | - | chr6_4:17041425-17041444 | Msa0979760:CDS | 40.0% |
| CAAACAAACTGGAATGCAGA+GGG | + | chr6_4:17041618-17041637 | None:intergenic | 40.0% | |
| ACAAACAAACTGGAATGCAG+AGG | + | chr6_4:17041619-17041638 | None:intergenic | 40.0% | |
| CAAGTCAAGTGTCATAACCA+AGG | + | chr6_4:17041665-17041684 | None:intergenic | 40.0% | |
| CTGGATACTCGGGATAAATT+AGG | - | chr6_4:17041765-17041784 | Msa0979760:intron | 40.0% | |
| GGGATAAATTAGGGATGTCT+GGG | - | chr6_4:17041775-17041794 | Msa0979760:intron | 40.0% | |
| CTTCCCTATTTCGAGGATAT+AGG | + | chr6_4:17042448-17042467 | None:intergenic | 40.0% | |
| TCCTCGAAATAGGGAAGTAA+AGG | - | chr6_4:17042451-17042470 | Msa0979760:CDS | 40.0% | |
| CCTCGAAATAGGGAAGTAAA+GGG | - | chr6_4:17042452-17042471 | Msa0979760:CDS | 40.0% | |
| TTTATATTGGCGGAATGGAG+TGG | + | chr6_4:17042519-17042538 | None:intergenic | 40.0% | |
| GAGTCTTTATATTGGCGGAA+TGG | + | chr6_4:17042524-17042543 | None:intergenic | 40.0% | |
| TTCCGCCAATATAAAGACTC+TGG | - | chr6_4:17042524-17042543 | Msa0979760:intron | 40.0% | |
| TATAAAGACTCTGGCCTAAG+GGG | - | chr6_4:17042533-17042552 | Msa0979760:intron | 40.0% | |
| CATTGTTTCAAACACCCCTT+AGG | + | chr6_4:17042550-17042569 | None:intergenic | 40.0% | |
| AGGTTTCTTTGCTAGCACTT+CGG | + | chr6_4:17042605-17042624 | None:intergenic | 40.0% | |
| CCAGAGATCAAATACAAGTC+AGG | + | chr6_4:17042625-17042644 | None:intergenic | 40.0% | |
| ! | CCTGACTTGTATTTGATCTC+TGG | - | chr6_4:17042622-17042641 | Msa0979760:intron | 40.0% |
| ! | AGGGCATCTATGTTTCATTG+AGG | + | chr6_4:17042658-17042677 | None:intergenic | 40.0% |
| GTCTCTAGCTAAGCATTCAA+AGG | + | chr6_4:17042678-17042697 | None:intergenic | 40.0% | |
| TAGCTAGAGACAACCTTGTT+TGG | - | chr6_4:17042687-17042706 | Msa0979760:CDS | 40.0% | |
| CTTATTTCCATAAGCTCTCC+AGG | + | chr6_4:17042826-17042845 | None:intergenic | 40.0% | |
| CCTATATCATAAGCACTCGA+GGG | + | chr6_4:17042902-17042921 | None:intergenic | 40.0% | |
| TCCTATATCATAAGCACTCG+AGG | + | chr6_4:17042903-17042922 | None:intergenic | 40.0% | |
| TTTGTTCTCTCAGCTGTTTG+GGG | - | chr6_4:17043003-17043022 | Msa0979760:intron | 40.0% | |
| GCTGATGTTCTTGAACTTGT+TGG | - | chr6_4:17043039-17043058 | Msa0979760:intron | 40.0% | |
| TGAGTGACACTAGTCAACTT+TGG | + | chr6_4:17043069-17043088 | None:intergenic | 40.0% | |
| ! | ACTAGTGTCACTCAATTTGG+AGG | - | chr6_4:17043075-17043094 | Msa0979760:intron | 40.0% |
| GCAAGTAAAACATCTGCTTC+AGG | + | chr6_4:17043284-17043303 | None:intergenic | 40.0% | |
| CTTCTTCCTCTTCGGAAATT+CGG | - | chr6_4:17044041-17044060 | Msa0979760:intron | 40.0% | |
| AAGAATCCGAATTTCCGAAG+AGG | + | chr6_4:17044050-17044069 | None:intergenic | 40.0% | |
| TAGCCTCTTAATAGGGATCA+TGG | - | chr6_4:17044090-17044109 | Msa0979760:intron | 40.0% | |
| AGCCTCTTAATAGGGATCAT+GGG | - | chr6_4:17044091-17044110 | Msa0979760:intron | 40.0% | |
| TACCCATGATCCCTATTAAG+AGG | + | chr6_4:17044096-17044115 | None:intergenic | 40.0% | |
| CAGGAACAACAACACGTAAT+GGG | + | chr6_4:17044119-17044138 | None:intergenic | 40.0% | |
| TATCATTGCAGAAGAATGCC+AGG | - | chr6_4:17044182-17044201 | Msa0979760:intron | 40.0% | |
| TCAGGGTTTCTTCATGCAAA+AGG | - | chr6_4:17044288-17044307 | Msa0979760:intron | 40.0% | |
| TGAACAGGGAAATCCATTTG+GGG | + | chr6_4:17044373-17044392 | None:intergenic | 40.0% | |
| CTGAACAGGGAAATCCATTT+GGG | + | chr6_4:17044374-17044393 | None:intergenic | 40.0% | |
| CAAGCAAGACTACTGTACAT+AGG | - | chr6_4:17044920-17044939 | Msa0979760:intron | 40.0% | |
| GAGACTGTTTGGAGAACTTA+TGG | + | chr6_4:17045142-17045161 | None:intergenic | 40.0% | |
| TGAACACTTGTGAGACTGTT+TGG | + | chr6_4:17045153-17045172 | None:intergenic | 40.0% | |
| GCTGTGCAGGTAAAAATTAG+CGG | - | chr6_4:17045259-17045278 | Msa0979760:intron | 40.0% | |
| AGAGTAGATGTGTCTGTTGA+TGG | - | chr6_4:17045316-17045335 | Msa0979760:intron | 40.0% | |
| GTTATAGTCGGCCCATTAAT+TGG | + | chr6_4:17045773-17045792 | None:intergenic | 40.0% | |
| TGCAAATGTTCAACCTGAGA+AGG | - | chr6_4:17045958-17045977 | Msa0979760:CDS | 40.0% | |
| ! | AAGACGTTTGGAACCTTAGA+GGG | - | chr6_4:17045984-17046003 | Msa0979760:CDS | 40.0% |
| GAGGGATACTAAACACTTCA+TGG | - | chr6_4:17046002-17046021 | Msa0979760:CDS | 40.0% | |
| ACTAAACACTTCATGGCATC+GGG | - | chr6_4:17046009-17046028 | Msa0979760:CDS | 40.0% | |
| TGAATAAGCCCTAGAGCTAA+AGG | - | chr6_4:17046162-17046181 | Msa0979760:CDS | 40.0% | |
| GAATAAGCCCTAGAGCTAAA+GGG | - | chr6_4:17046163-17046182 | Msa0979760:CDS | 40.0% | |
| !! | TCTGATGGTGCTGTTATTCC+TGG | + | chr6_4:17039548-17039567 | None:intergenic | 45.0% |
| !!! | CGTTTTGGTTCTGCGTTGAA+AGG | + | chr6_4:17039696-17039715 | None:intergenic | 45.0% |
| !!! | GCAATAAGCGCTGAACGTTT+TGG | + | chr6_4:17039711-17039730 | None:intergenic | 45.0% |
| TTGTTCTTTCAGGAGAGGGA+GGG | - | chr6_4:17041215-17041234 | Msa0979760:intron | 45.0% | |
| AATTGTGGAGAGTCCTGCAA+TGG | - | chr6_4:17041282-17041301 | Msa0979760:intron | 45.0% | |
| CCAGTGTATTGTGGATATGC+AGG | + | chr6_4:17041349-17041368 | None:intergenic | 45.0% | |
| CCTGCATATCCACAATACAC+TGG | - | chr6_4:17041346-17041365 | Msa0979760:intron | 45.0% | |
| !! | TCTTTCAAGCCGGTTTTGTG+GGG | - | chr6_4:17041426-17041445 | Msa0979760:CDS | 45.0% |
| CGGGATAAATTAGGGATGTC+TGG | - | chr6_4:17041774-17041793 | Msa0979760:intron | 45.0% | |
| CAAGAGAACACATACCTGCA+GGG | + | chr6_4:17042151-17042170 | None:intergenic | 45.0% | |
| AACAAATTGTGTCAGTGCGC+AGG | - | chr6_4:17042254-17042273 | Msa0979760:intron | 45.0% | |
| ACAAATTGTGTCAGTGCGCA+GGG | - | chr6_4:17042255-17042274 | Msa0979760:intron | 45.0% | |
| AGCAAGACAAGGACAGTGAA+AGG | - | chr6_4:17042296-17042315 | Msa0979760:intron | 45.0% | |
| GCAAGACAAGGACAGTGAAA+GGG | - | chr6_4:17042297-17042316 | Msa0979760:intron | 45.0% | |
| CAAGACAAGGACAGTGAAAG+GGG | - | chr6_4:17042298-17042317 | Msa0979760:intron | 45.0% | |
| ! | GGATGGGATGTTTCTGCTAT+TGG | - | chr6_4:17042323-17042342 | Msa0979760:intron | 45.0% |
| ATATCCAGTAGTGCATGCAG+TGG | - | chr6_4:17042381-17042400 | Msa0979760:intron | 45.0% | |
| CCCTTTACTTCCCTATTTCG+AGG | + | chr6_4:17042455-17042474 | None:intergenic | 45.0% | |
| GGCCAGAGTCTTTATATTGG+CGG | + | chr6_4:17042529-17042548 | None:intergenic | 45.0% | |
| AACCTATCCTGGAGAGCTTA+TGG | - | chr6_4:17042816-17042835 | Msa0979760:intron | 45.0% | |
| TTCCATAAGCTCTCCAGGAT+AGG | + | chr6_4:17042821-17042840 | None:intergenic | 45.0% | |
| CCCTCGAGTGCTTATGATAT+AGG | - | chr6_4:17042899-17042918 | Msa0979760:intron | 45.0% | |
| TAGGATTCATGCCACACTGA+TGG | - | chr6_4:17043430-17043449 | Msa0979760:CDS | 45.0% | |
| CCAGGAACAACAACACGTAA+TGG | + | chr6_4:17044120-17044139 | None:intergenic | 45.0% | |
| ! | CCATTACGTGTTGTTGTTCC+TGG | - | chr6_4:17044117-17044136 | Msa0979760:intron | 45.0% |
| !! | GTTGTTGTTCCTGGTGTCAT+TGG | - | chr6_4:17044126-17044145 | Msa0979760:intron | 45.0% |
| TTGGAGCTCGGTCTGTTAAA+TGG | - | chr6_4:17044145-17044164 | Msa0979760:intron | 45.0% | |
| TGTTCCCACCATCAGTGAAT+TGG | - | chr6_4:17044320-17044339 | Msa0979760:intron | 45.0% | |
| GTTCCCACCATCAGTGAATT+GGG | - | chr6_4:17044321-17044340 | Msa0979760:intron | 45.0% | |
| TGTCCCAATTCACTGATGGT+GGG | + | chr6_4:17044327-17044346 | None:intergenic | 45.0% | |
| TTGTCCCAATTCACTGATGG+TGG | + | chr6_4:17044328-17044347 | None:intergenic | 45.0% | |
| CCTGAACAGGGAAATCCATT+TGG | + | chr6_4:17044375-17044394 | None:intergenic | 45.0% | |
| ! | CCAAATGGATTTCCCTGTTC+AGG | - | chr6_4:17044372-17044391 | Msa0979760:intron | 45.0% |
| CATATAACACACTGCCCACA+AGG | + | chr6_4:17044557-17044576 | None:intergenic | 45.0% | |
| TTCATGCTTCCGTGTGTATG+TGG | - | chr6_4:17044652-17044671 | Msa0979760:intron | 45.0% | |
| TCATGCTTCCGTGTGTATGT+GGG | - | chr6_4:17044653-17044672 | Msa0979760:intron | 45.0% | |
| AAAGGCAACCCACATACACA+CGG | + | chr6_4:17044664-17044683 | None:intergenic | 45.0% | |
| ACAGGCTCATATTCTGCTCT+TGG | - | chr6_4:17045206-17045225 | Msa0979760:intron | 45.0% | |
| GCACAGCATATGCCAGAATT+AGG | + | chr6_4:17045246-17045265 | None:intergenic | 45.0% | |
| AATTCTGGCATATGCTGTGC+AGG | - | chr6_4:17045246-17045265 | Msa0979760:intron | 45.0% | |
| ! | GTAGATGTGTCTGTTGATGG+AGG | - | chr6_4:17045319-17045338 | Msa0979760:intron | 45.0% |
| ! | CTGTTGATGGAGGCAAAACA+TGG | - | chr6_4:17045329-17045348 | Msa0979760:intron | 45.0% |
| TGATGGAGGCAAAACATGGA+TGG | - | chr6_4:17045333-17045352 | Msa0979760:intron | 45.0% | |
| CACAGAGATTGTTGCGAAAG+CGG | - | chr6_4:17045462-17045481 | Msa0979760:intron | 45.0% | |
| CTAAATTGCGGTTGCGATCA+TGG | - | chr6_4:17045647-17045666 | Msa0979760:intron | 45.0% | |
| GATGCCCAACTCAATTAGAG+TGG | + | chr6_4:17045880-17045899 | None:intergenic | 45.0% | |
| CAAACGTCTTCAACCTTCTC+AGG | + | chr6_4:17045974-17045993 | None:intergenic | 45.0% | |
| CTGAGAAGGTTGAAGACGTT+TGG | - | chr6_4:17045972-17045991 | Msa0979760:CDS | 45.0% | |
| ! | GAAGACGTTTGGAACCTTAG+AGG | - | chr6_4:17045983-17046002 | Msa0979760:CDS | 45.0% |
| !!! | CTTTAATTTTTTTATTTATT+TGG | - | chr6_4:17039824-17039843 | Msa0979760:intron | 5.0% |
| AGGATGACGTGGTGGTTCTT+TGG | + | chr6_4:17039576-17039595 | None:intergenic | 50.0% | |
| TGAAGAGAAGGATGACGTGG+TGG | + | chr6_4:17039584-17039603 | None:intergenic | 50.0% | |
| GTAAGCTCGTGAGAAAGCGA+TGG | - | chr6_4:17040461-17040480 | Msa0979760:CDS | 50.0% | |
| GTTGTTCTTTCAGGAGAGGG+AGG | - | chr6_4:17041214-17041233 | Msa0979760:intron | 50.0% | |
| !! | CTTTCAAGCCGGTTTTGTGG+GGG | - | chr6_4:17041427-17041446 | Msa0979760:CDS | 50.0% |
| TTTGTGGGGGTGAGTGAGTT+AGG | - | chr6_4:17041440-17041459 | Msa0979760:CDS | 50.0% | |
| CAGATGATTGGTAGGGGTTG+TGG | - | chr6_4:17041557-17041576 | Msa0979760:CDS | 50.0% | |
| ! | GGGTTGTGGTGTCAACATGT+TGG | - | chr6_4:17041571-17041590 | Msa0979760:CDS | 50.0% |
| TAATGTAACTGCCACCCTGC+AGG | - | chr6_4:17042134-17042153 | Msa0979760:intron | 50.0% | |
| GCAAGAGAACACATACCTGC+AGG | + | chr6_4:17042152-17042171 | None:intergenic | 50.0% | |
| GGACTGCTATGAGCAAGACA+AGG | - | chr6_4:17042285-17042304 | Msa0979760:intron | 50.0% | |
| ACAAGGACAGTGAAAGGGGT+TGG | - | chr6_4:17042302-17042321 | Msa0979760:intron | 50.0% | |
| GACAGTGAAAGGGGTTGGAT+GGG | - | chr6_4:17042307-17042326 | Msa0979760:intron | 50.0% | |
| TTGTCCACTGCATGCACTAC+TGG | + | chr6_4:17042388-17042407 | None:intergenic | 50.0% | |
| TAAGCACTCGAGGGACTGTT+TGG | + | chr6_4:17042893-17042912 | None:intergenic | 50.0% | |
| ! | TGTTTGGGGTGGTGCCAAAT+TGG | - | chr6_4:17043017-17043036 | Msa0979760:intron | 50.0% |
| GGCTTCAATACCACTCAGTC+AGG | - | chr6_4:17043250-17043269 | Msa0979760:intron | 50.0% | |
| CAGTGTGGCATGAATCCTAG+AGG | + | chr6_4:17043429-17043448 | None:intergenic | 50.0% | |
| ACACTGAGAAGCCATCAGTG+TGG | + | chr6_4:17043444-17043463 | None:intergenic | 50.0% | |
| TGGCTTCTCAGTGTCATCGT+AGG | - | chr6_4:17043450-17043469 | Msa0979760:CDS | 50.0% | |
| AGCCTTTGCTTCAGCGTTAC+AGG | - | chr6_4:17043969-17043988 | Msa0979760:intron | 50.0% | |
| GCCTTTGCTTCAGCGTTACA+GGG | - | chr6_4:17043970-17043989 | Msa0979760:intron | 50.0% | |
| CCTTTGCTTCAGCGTTACAG+GGG | - | chr6_4:17043971-17043990 | Msa0979760:intron | 50.0% | |
| !! | TTCCTGGTGTCATTGGAGCT+CGG | - | chr6_4:17044133-17044152 | Msa0979760:intron | 50.0% |
| AGCTCGGTCTGTTAAATGGC+TGG | - | chr6_4:17044149-17044168 | Msa0979760:intron | 50.0% | |
| ! | GAAATCCATTTGGGGTCTCC+TGG | + | chr6_4:17044365-17044384 | None:intergenic | 50.0% |
| ACGTGAGCACAGTTAAGCCT+GGG | - | chr6_4:17044588-17044607 | Msa0979760:intron | 50.0% | |
| ATTAGCGGTTATGCCGCATC+AGG | - | chr6_4:17045274-17045293 | Msa0979760:intron | 50.0% | |
| ATCACGCCAACAGCGACAAA+TGG | - | chr6_4:17045398-17045417 | Msa0979760:intron | 50.0% | |
| TCACGCCAACAGCGACAAAT+GGG | - | chr6_4:17045399-17045418 | Msa0979760:intron | 50.0% | |
| AAGCCCTAGAGCTAAAGGGA+AGG | - | chr6_4:17046167-17046186 | Msa0979760:CDS | 50.0% | |
| AGCCCTAGAGCTAAAGGGAA+GGG | - | chr6_4:17046168-17046187 | Msa0979760:CDS | 50.0% | |
| !! | ACCCCTTCCCTTTAGCTCTA+GGG | + | chr6_4:17046173-17046192 | None:intergenic | 50.0% |
| !! | AACCCCTTCCCTTTAGCTCT+AGG | + | chr6_4:17046174-17046193 | None:intergenic | 50.0% |
| !! | AGGAGAGGGAGGGAGTGTTT+GGG | - | chr6_4:17041225-17041244 | Msa0979760:intron | 55.0% |
| GTGGAGAGTCCTGCAATGGA+CGG | - | chr6_4:17041286-17041305 | Msa0979760:intron | 55.0% | |
| TGGAGAGTCCTGCAATGGAC+GGG | - | chr6_4:17041287-17041306 | Msa0979760:intron | 55.0% | |
| GGTCATATCCCGTCCATTGC+AGG | + | chr6_4:17041298-17041317 | None:intergenic | 55.0% | |
| GCAATGGACGGGATATGACC+TGG | - | chr6_4:17041298-17041317 | Msa0979760:intron | 55.0% | |
| CTCACTCACCCCCACAAAAC+CGG | + | chr6_4:17041438-17041457 | None:intergenic | 55.0% | |
| GAGAACACATACCTGCAGGG+TGG | + | chr6_4:17042148-17042167 | None:intergenic | 55.0% | |
| TGTGTCAGTGCGCAGGGAAT+CGG | - | chr6_4:17042261-17042280 | Msa0979760:intron | 55.0% | |
| GGACAGTGAAAGGGGTTGGA+TGG | - | chr6_4:17042306-17042325 | Msa0979760:intron | 55.0% | |
| GTTCTCTCAGCTGTTTGGGG+TGG | - | chr6_4:17043006-17043025 | Msa0979760:intron | 55.0% | |
| CCCCTGTAACGCTGAAGCAA+AGG | + | chr6_4:17043974-17043993 | None:intergenic | 55.0% | |
| GTCAACCAGGAGACCCCAAA+TGG | - | chr6_4:17044357-17044376 | Msa0979760:intron | 55.0% | |
| GACGTGAGCACAGTTAAGCC+TGG | - | chr6_4:17044587-17044606 | Msa0979760:intron | 55.0% | |
| GAGCACAGTTAAGCCTGGGA+AGG | - | chr6_4:17044592-17044611 | Msa0979760:intron | 55.0% | |
| CAACAGCGACAAATGGGCGT+GGG | - | chr6_4:17045405-17045424 | Msa0979760:intron | 55.0% | |
| GCCCTAGAGCTAAAGGGAAG+GGG | - | chr6_4:17046169-17046188 | Msa0979760:CDS | 55.0% | |
| !! | CAGGAGAGGGAGGGAGTGTT+TGG | - | chr6_4:17041224-17041243 | Msa0979760:intron | 60.0% |
| GGGTTTGCAGCCTGACTGAG+TGG | + | chr6_4:17043263-17043282 | None:intergenic | 60.0% | |
| GACCGAGCTCCAATGACACC+AGG | + | chr6_4:17044138-17044157 | None:intergenic | 60.0% | |
| AGCGGTTATGCCGCATCAGG+TGG | - | chr6_4:17045277-17045296 | Msa0979760:intron | 60.0% | |
| GGTTATGCCGCATCAGGTGG+TGG | - | chr6_4:17045280-17045299 | Msa0979760:intron | 60.0% | |
| GCCTCTTCCACCACCTGATG+CGG | + | chr6_4:17045290-17045309 | None:intergenic | 60.0% | |
| CCACGCCCATTTGTCGCTGT+TGG | + | chr6_4:17045407-17045426 | None:intergenic | 60.0% | |
| CCAACAGCGACAAATGGGCG+TGG | - | chr6_4:17045404-17045423 | Msa0979760:intron | 60.0% | |
| GTCAGTGCGCAGGGAATCGG+AGG | - | chr6_4:17042264-17042283 | Msa0979760:intron | 65.0% | |
| !! | GCCGCATCAGGTGGTGGAAG+AGG | - | chr6_4:17045286-17045305 | Msa0979760:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 17039466 | 17046294 | 17039466 | ID=Msa0979760;Name=Msa0979760 |
| chr6_4 | mRNA | 17039466 | 17046294 | 17039466 | ID=Msa0979760-mRNA-1;Parent=Msa0979760;Name=Msa0979760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=76|1|1|1|0.91|0.84|13|205|393 |
| chr6_4 | exon | 17039466 | 17039665 | 17039466 | ID=Msa0979760-mRNA-1:exon:5423;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17039692 | 17039813 | 17039692 | ID=Msa0979760-mRNA-1:exon:5422;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17040277 | 17040492 | 17040277 | ID=Msa0979760-mRNA-1:exon:5421;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17041147 | 17041194 | 17041147 | ID=Msa0979760-mRNA-1:exon:5420;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17041367 | 17041468 | 17041367 | ID=Msa0979760-mRNA-1:exon:5419;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17041557 | 17041667 | 17041557 | ID=Msa0979760-mRNA-1:exon:5418;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17042438 | 17042533 | 17042438 | ID=Msa0979760-mRNA-1:exon:5417;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17042626 | 17042744 | 17042626 | ID=Msa0979760-mRNA-1:exon:5416;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17043410 | 17043491 | 17043410 | ID=Msa0979760-mRNA-1:exon:5415;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17043605 | 17043641 | 17043605 | ID=Msa0979760-mRNA-1:exon:5414;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17044925 | 17044987 | 17044925 | ID=Msa0979760-mRNA-1:exon:5413;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17045955 | 17046070 | 17045955 | ID=Msa0979760-mRNA-1:exon:5412;Parent=Msa0979760-mRNA-1 |
| chr6_4 | exon | 17046144 | 17046294 | 17046144 | ID=Msa0979760-mRNA-1:exon:5411;Parent=Msa0979760-mRNA-1 |
| chr6_4 | five_prime_UTR | 17046219 | 17046294 | 17046219 | ID=Msa0979760-mRNA-1:five_prime_utr;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17046144 | 17046218 | 17046144 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17045955 | 17046070 | 17045955 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17044925 | 17044987 | 17044925 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17043605 | 17043641 | 17043605 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17043410 | 17043491 | 17043410 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17042626 | 17042744 | 17042626 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17042438 | 17042533 | 17042438 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17041557 | 17041667 | 17041557 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17041367 | 17041468 | 17041367 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17041147 | 17041194 | 17041147 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17040277 | 17040492 | 17040277 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | CDS | 17039697 | 17039813 | 17039697 | ID=Msa0979760-mRNA-1:cds;Parent=Msa0979760-mRNA-1 |
| chr6_4 | three_prime_UTR | 17039692 | 17039696 | 17039692 | ID=Msa0979760-mRNA-1:three_prime_utr;Parent=Msa0979760-mRNA-1 |
| chr6_4 | three_prime_UTR | 17039466 | 17039665 | 17039466 | ID=Msa0979760-mRNA-1:three_prime_utr;Parent=Msa0979760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
