Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877450 | XP_013451423.1 | 96.692 | 393 | 13 | 0 | 1 | 393 | 1 | 393 | 0.0 | 794 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877450 | sp|Q9S850|SUOX_ARATH | 77.863 | 393 | 87 | 0 | 1 | 393 | 1 | 393 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877450 | A0A072U725 | 96.692 | 393 | 13 | 0 | 1 | 393 | 1 | 393 | 0.0 | 794 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0775260 | Msa0877450 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa0877450 | Msa0979760 | 0.840983 | 6.256841e-58 | -8.615850e-47 |
| Msa0877450 | Msa1386430 | 0.801644 | 8.168316e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877450 | MtrunA17_Chr6g0459641 | 96.692 | 393 | 13 | 0 | 1 | 393 | 1 | 393 | 0.0 | 794 |
| Msa0877450 | MtrunA17_Chr7g0227151 | 87.248 | 298 | 37 | 1 | 96 | 392 | 36 | 333 | 0.0 | 541 |
| Msa0877450 | MtrunA17_Chr5g0424491 | 32.732 | 388 | 227 | 11 | 20 | 388 | 90 | 462 | 6.61e-60 | 208 |
| Msa0877450 | MtrunA17_Chr3g0115151 | 30.789 | 393 | 236 | 12 | 20 | 392 | 34 | 410 | 2.87e-55 | 195 |
| Msa0877450 | MtrunA17_Chr3g0115131 | 31.726 | 394 | 230 | 13 | 16 | 387 | 79 | 455 | 5.66e-50 | 180 |
| Msa0877450 | MtrunA17_Chr7g0227141 | 64.062 | 64 | 23 | 0 | 22 | 85 | 5 | 68 | 3.81e-25 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877450 | AT3G01910.1 | 77.863 | 393 | 87 | 0 | 1 | 393 | 1 | 393 | 0.0 | 667 |
| Msa0877450 | AT3G01910.2 | 81.208 | 298 | 56 | 0 | 96 | 393 | 1 | 298 | 0.0 | 520 |
| Msa0877450 | AT3G01910.3 | 80.263 | 228 | 45 | 0 | 166 | 393 | 14 | 241 | 4.90e-139 | 396 |
| Msa0877450 | AT1G37130.1 | 31.931 | 404 | 219 | 15 | 16 | 387 | 107 | 486 | 4.26e-54 | 192 |
| Msa0877450 | AT1G77760.1 | 30.491 | 387 | 235 | 11 | 20 | 387 | 118 | 489 | 1.02e-53 | 191 |
Find 123 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTAGTGTCACTCAATT+TGG | 0.238406 | 6_1:-16865163 | Msa0877450:CDS |
| TTCAAGAACATCAGCCAATT+TGG | 0.244353 | 6_1:+16865204 | None:intergenic |
| ACCCCTTCCCTTTAGCTCTA+AGG | 0.261736 | 6_1:+16861144 | None:intergenic |
| CCATTACGTGTTGTTGTTCC+TGG | 0.268068 | 6_1:-16864341 | Msa0877450:CDS |
| GCAATAAGCGCTGAACGTTT+TGG | 0.305029 | 6_1:+16868529 | None:intergenic |
| GGATGGGATGTTTCTGCTAT+TGG | 0.307106 | 6_1:-16865912 | Msa0877450:CDS |
| AGGATGACGTGGTGGTTCTT+TGG | 0.317348 | 6_1:+16868684 | None:intergenic |
| GCAAGTAAAACATCTGCTTC+AGG | 0.330544 | 6_1:+16864949 | None:intergenic |
| AGAAAATGGAGGACCATATA+AGG | 0.331136 | 6_1:-16865001 | Msa0877450:CDS |
| CCAAATGGATTTCCCTGTTC+AGG | 0.332888 | 6_1:-16864086 | Msa0877450:intron |
| AATAATAAGAATACCTGAAC+AGG | 0.338083 | 6_1:+16864073 | None:intergenic |
| TGTTCCCACCATCAGTGAAT+TGG | 0.344491 | 6_1:-16864138 | Msa0877450:CDS |
| CTTCAGATTTCTTCTATAAG+AGG | 0.350221 | 6_1:-16868492 | Msa0877450:CDS |
| GCTGATGTTCTTGAACTTGT+TGG | 0.357661 | 6_1:-16865196 | Msa0877450:CDS |
| ATGATAAAGACAATGGTCTT+TGG | 0.358150 | 6_1:+16868793 | None:intergenic |
| GAGGGATATTAAACACTTCA+TGG | 0.359863 | 6_1:-16861311 | Msa0877450:CDS |
| TGTTTGGGGTGGTGCCAAAT+TGG | 0.361546 | 6_1:-16865218 | Msa0877450:CDS |
| GCAGTGTGTTATATGTTCTT+TGG | 0.362085 | 6_1:-16863896 | Msa0877450:intron |
| CTGAACAGGGAAATCCATTT+GGG | 0.369427 | 6_1:+16864087 | None:intergenic |
| TATAATAAGCATGGAGCATT+TGG | 0.371947 | 6_1:-16861044 | Msa0877450:three_prime_UTR |
| GTTGTTGTTCCTGGTGTCAT+TGG | 0.374722 | 6_1:-16864332 | Msa0877450:CDS |
| CTGAAAAGGTTGAAGACGTT+TGG | 0.380613 | 6_1:-16861341 | Msa0877450:CDS |
| ATGAAAACAGAGTGAGTTAG+TGG | 0.384610 | 6_1:+16868756 | None:intergenic |
| CCTGAACAGGGAAATCCATT+TGG | 0.389441 | 6_1:+16864086 | None:intergenic |
| AAGTGTTTAATATCCCTCTA+AGG | 0.399509 | 6_1:+16861316 | None:intergenic |
| ATCTTTCATATAGAGCCGTT+TGG | 0.402366 | 6_1:+16867427 | None:intergenic |
| TTGGAGCTCGGTCTGTTAAA+TGG | 0.408474 | 6_1:-16864313 | Msa0877450:CDS |
| GGCTCTATATGAAAGATATC+AGG | 0.413279 | 6_1:-16867421 | Msa0877450:intron |
| GAAATCCATTTGGGGTCTCC+TGG | 0.415935 | 6_1:+16864096 | None:intergenic |
| GAAGACGTTTGGAACCTTAG+AGG | 0.415954 | 6_1:-16861330 | Msa0877450:CDS |
| TAGCCTCTTAATAGGGATCA+TGG | 0.419878 | 6_1:-16864368 | Msa0877450:CDS |
| CAAGTAAAACATCTGCTTCA+GGG | 0.420172 | 6_1:+16864950 | None:intergenic |
| AACAAATTGTGTCAGTGCGC+AGG | 0.422781 | 6_1:-16865981 | Msa0877450:intron |
| CCAACAGCGACAAATGGGCT+TGG | 0.425673 | 6_1:-16863081 | Msa0877450:CDS |
| CGAATAAGCCTTAGAGCTAA+AGG | 0.426690 | 6_1:-16861152 | Msa0877450:three_prime_UTR |
| ATATCATCAACGATGGGAAT+AGG | 0.431808 | 6_1:+16868460 | None:intergenic |
| ATGCTGCCAACAGCGACAAA+TGG | 0.437982 | 6_1:-16863087 | Msa0877450:CDS |
| AGAGTAGATGTGTCTGTTGA+TGG | 0.438409 | 6_1:-16863169 | Msa0877450:CDS |
| GGACAGTGAAAGGGGTTGGA+TGG | 0.441148 | 6_1:-16865929 | Msa0877450:CDS |
| TGTAAGCATTGATAAGTGTA+AGG | 0.442162 | 6_1:-16865122 | Msa0877450:intron |
| AGTGGTATTGAAGCCTTATA+TGG | 0.442872 | 6_1:+16864988 | None:intergenic |
| TGTGTCAGTGCGCAGGGAAT+CGG | 0.442934 | 6_1:-16865974 | Msa0877450:intron |
| GCCGCATCAGGTGGTGGCAG+AGG | 0.443506 | 6_1:-16863199 | Msa0877450:CDS |
| GTTCCCACCATCAGTGAATT+GGG | 0.444140 | 6_1:-16864137 | Msa0877450:CDS |
| TTCTTCTATAAGAGGAATCA+TGG | 0.447920 | 6_1:-16868484 | Msa0877450:CDS |
| GATGTTTCTGCTATTGGAAA+TGG | 0.450776 | 6_1:-16865906 | Msa0877450:intron |
| CCATCGTTGATGATATCAAC+AGG | 0.453731 | 6_1:-16868453 | Msa0877450:intron |
| TTAAATAAACTAACCTTCCC+AGG | 0.453737 | 6_1:+16863853 | None:intergenic |
| TCAGGGTTTCTTCATGCAAA+AGG | 0.454607 | 6_1:-16864170 | Msa0877450:intron |
| CAGGAACAACAACACGTAAT+GGG | 0.456347 | 6_1:+16864342 | None:intergenic |
| CCAAGCCCATTTGTCGCTGT+TGG | 0.456907 | 6_1:+16863081 | None:intergenic |
| TTACTTGCTTATGAAATGAA+TGG | 0.458594 | 6_1:-16864934 | Msa0877450:CDS |
| GGCTATGCCGCATCAGGTGG+TGG | 0.459194 | 6_1:-16863205 | Msa0877450:CDS |
| TGCTGCCAACAGCGACAAAT+GGG | 0.464354 | 6_1:-16863086 | Msa0877450:CDS |
| AGATACTGTGTGGAAATATC+TGG | 0.467034 | 6_1:-16867464 | Msa0877450:CDS |
| TGAATTGGGACAATATTGAT+TGG | 0.469240 | 6_1:-16864123 | Msa0877450:CDS |
| CAACAGCGACAAATGGGCTT+GGG | 0.471143 | 6_1:-16863080 | Msa0877450:CDS |
| ACTATAACTTAGTTTCATCA+TGG | 0.475538 | 6_1:-16861078 | Msa0877450:three_prime_UTR |
| TGCAAATGTTCAACCTGAAA+AGG | 0.479079 | 6_1:-16861355 | Msa0877450:CDS |
| GTGGAAATATCTGGTCTTGT+GGG | 0.479471 | 6_1:-16867455 | Msa0877450:CDS |
| TGAGTGACACTAGTCAACTT+TGG | 0.481166 | 6_1:+16865169 | None:intergenic |
| TTCCTGGTGTCATTGGAGCT+CGG | 0.484478 | 6_1:-16864325 | Msa0877450:CDS |
| CCAGGAACAACAACACGTAA+TGG | 0.485436 | 6_1:+16864341 | None:intergenic |
| GACGTGAGCACAGTTAAGCC+TGG | 0.488918 | 6_1:-16863871 | Msa0877450:CDS |
| AGCTCGGTCTGTTAAATGGC+TGG | 0.490809 | 6_1:-16864309 | Msa0877450:CDS |
| TACCCATGATCCCTATTAAG+AGG | 0.490814 | 6_1:+16864365 | None:intergenic |
| GACAGTGAAAGGGGTTGGAT+GGG | 0.494113 | 6_1:-16865928 | Msa0877450:CDS |
| GAATAAGCCTTAGAGCTAAA+GGG | 0.496050 | 6_1:-16861151 | Msa0877450:three_prime_UTR |
| ATTAGCGGCTATGCCGCATC+AGG | 0.500644 | 6_1:-16863211 | Msa0877450:CDS |
| GGCTTCAATACCACTCAGTC+AGG | 0.503512 | 6_1:-16864980 | Msa0877450:CDS |
| ATTAAACACTTCATGGCATC+GGG | 0.504047 | 6_1:-16861304 | Msa0877450:CDS |
| TCTGATGGTGCTGTTAATCC+TGG | 0.515906 | 6_1:+16868712 | None:intergenic |
| AAGACGTTTGGAACCTTAGA+GGG | 0.518434 | 6_1:-16861329 | Msa0877450:CDS |
| ACTAGTGTCACTCAATTTGG+AGG | 0.530201 | 6_1:-16865160 | Msa0877450:CDS |
| CACAGAGATTATTGCGAAAG+CGG | 0.530527 | 6_1:-16863023 | Msa0877450:intron |
| ACAAGGACAGTGAAAGGGGT+TGG | 0.531891 | 6_1:-16865933 | Msa0877450:CDS |
| GCAAGACAAGGACAGTGAAA+GGG | 0.532744 | 6_1:-16865938 | Msa0877450:CDS |
| TATTAAACACTTCATGGCAT+CGG | 0.535316 | 6_1:-16861305 | Msa0877450:CDS |
| TTGTCCCAATTCACTGATGG+TGG | 0.536309 | 6_1:+16864133 | None:intergenic |
| AGCAAGACAAGGACAGTGAA+AGG | 0.537046 | 6_1:-16865939 | Msa0877450:CDS |
| TAATGTAACTGCCACAATGC+AGG | 0.537778 | 6_1:-16866101 | Msa0877450:intron |
| AGCCTCTTAATAGGGATCAT+GGG | 0.538313 | 6_1:-16864367 | Msa0877450:CDS |
| ACAAATTGTGTCAGTGCGCA+GGG | 0.542397 | 6_1:-16865980 | Msa0877450:intron |
| TTGGAGTTGATTTGAAGAGA+AGG | 0.545819 | 6_1:+16868664 | None:intergenic |
| GTCTTGTGGGACATTCCAAA+CGG | 0.551057 | 6_1:-16867442 | Msa0877450:CDS |
| TATCATTGCAGAAGAATGCC+AGG | 0.560426 | 6_1:-16864276 | Msa0877450:intron |
| GTTCTCTCAGCTGTTTGGGG+TGG | 0.560970 | 6_1:-16865229 | Msa0877450:intron |
| TTCTCTTCAAATCAACTCCA+AGG | 0.562752 | 6_1:-16868662 | Msa0877450:intron |
| GGGTTTGCAGCCTGACTGAG+TGG | 0.563102 | 6_1:+16864970 | None:intergenic |
| AGCCTTAGAGCTAAAGGGAA+GGG | 0.565477 | 6_1:-16861146 | Msa0877450:three_prime_UTR |
| GTCAACCAGGAGACCCCAAA+TGG | 0.569625 | 6_1:-16864101 | Msa0877450:CDS |
| GCCTCTGCCACCACCTGATG+CGG | 0.570879 | 6_1:+16863198 | None:intergenic |
| GCCTTAGAGCTAAAGGGAAG+GGG | 0.574536 | 6_1:-16861145 | Msa0877450:three_prime_UTR |
| TGTGGAAATATCTGGTCTTG+TGG | 0.579461 | 6_1:-16867456 | Msa0877450:CDS |
| AGCGGCTATGCCGCATCAGG+TGG | 0.583279 | 6_1:-16863208 | Msa0877450:CDS |
| CTGTTGATGGAGGCAAAACA+TGG | 0.587993 | 6_1:-16863156 | Msa0877450:CDS |
| GGTTCTTTGGAATAGTCTGA+TGG | 0.589430 | 6_1:+16868697 | None:intergenic |
| TTTGTTCTCTCAGCTGTTTG+GGG | 0.590503 | 6_1:-16865232 | Msa0877450:intron |
| GTGGCAGTTACATTATACTT+CGG | 0.595109 | 6_1:+16866109 | None:intergenic |
| TTACTGTGATATAATAAGCA+TGG | 0.595891 | 6_1:-16861053 | Msa0877450:three_prime_UTR |
| ACGTGAGCACAGTTAAGCCT+GGG | 0.597879 | 6_1:-16863870 | Msa0877450:CDS |
| TGATGGAGGCAAAACATGGA+TGG | 0.604155 | 6_1:-16863152 | Msa0877450:CDS |
| CAAGACAAGGACAGTGAAAG+GGG | 0.612810 | 6_1:-16865937 | Msa0877450:CDS |
| GTCAGTGCGCAGGGAATCGG+AGG | 0.613554 | 6_1:-16865971 | Msa0877450:intron |
| ACAATATTGATTGGTCAACC+AGG | 0.617652 | 6_1:-16864114 | Msa0877450:CDS |
| CCTGTTGATATCATCAACGA+TGG | 0.620773 | 6_1:+16868453 | None:intergenic |
| CTCTTATAGAAGAAATCTGA+AGG | 0.620948 | 6_1:+16868493 | None:intergenic |
| ATATTGTCCCAATTCACTGA+TGG | 0.623469 | 6_1:+16864130 | None:intergenic |
| ACTGAACTCTGAATATGCAT+CGG | 0.623810 | 6_1:-16861201 | Msa0877450:three_prime_UTR |
| AGAGATGATGATAAAGACAA+TGG | 0.626090 | 6_1:+16868786 | None:intergenic |
| GACCGAGCTCCAATGACACC+AGG | 0.633741 | 6_1:+16864323 | None:intergenic |
| CTGTTGATATCATCAACGAT+GGG | 0.640040 | 6_1:+16868454 | None:intergenic |
| TGTCCCAATTCACTGATGGT+GGG | 0.643984 | 6_1:+16864134 | None:intergenic |
| AAGCCTTAGAGCTAAAGGGA+AGG | 0.652559 | 6_1:-16861147 | Msa0877450:three_prime_UTR |
| GAGCACAGTTAAGCCTGGGA+AGG | 0.652581 | 6_1:-16863866 | Msa0877450:intron |
| TGAAGAGAAGGATGACGTGG+TGG | 0.668281 | 6_1:+16868676 | None:intergenic |
| GAGAACACATACCTGCATTG+TGG | 0.679224 | 6_1:+16866090 | None:intergenic |
| GTAGATGTGTCTGTTGATGG+AGG | 0.695577 | 6_1:-16863166 | Msa0877450:CDS |
| GGACTGCTATGAGCAAGACA+AGG | 0.699935 | 6_1:-16865950 | Msa0877450:CDS |
| TGAACAGGGAAATCCATTTG+GGG | 0.713949 | 6_1:+16864088 | None:intergenic |
| ATAATAAGAATACCTGAACA+GGG | 0.725250 | 6_1:+16864074 | None:intergenic |
| ATTTGAAGAGAAGGATGACG+TGG | 0.734477 | 6_1:+16868673 | None:intergenic |
| ATTTATGAACAGATACTGTG+TGG | 0.735860 | 6_1:-16867474 | Msa0877450:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTAGTATTATAGTA+TGG | - | chr6_1:16861462-16861481 | Msa0877450:intron | 10.0% |
| !!! | TAATTTTTTTAAAGATCAAA+AGG | + | chr6_1:16864812-16864831 | None:intergenic | 10.0% |
| !!! | TTTTGATCTTTAAAAAAATT+AGG | - | chr6_1:16864811-16864830 | Msa0877450:intron | 10.0% |
| !! | AAAAACAGTATAAAAATAAA+AGG | + | chr6_1:16864992-16865011 | None:intergenic | 10.0% |
| !! | AATAGTGTTAATAAAAAATT+AGG | - | chr6_1:16865153-16865172 | Msa0877450:CDS | 10.0% |
| !!! | CATTATTTTTAAATTATTAC+CGG | - | chr6_1:16867373-16867392 | Msa0877450:intron | 10.0% |
| !! | AATGATATAAAATTATTTGT+AGG | - | chr6_1:16868063-16868082 | Msa0877450:intron | 10.0% |
| !! | TTAATTCAATTAAGTTAACA+AGG | - | chr6_1:16861683-16861702 | Msa0877450:intron | 15.0% |
| !! | TAATTCAATTAAGTTAACAA+GGG | - | chr6_1:16861684-16861703 | Msa0877450:intron | 15.0% |
| !!! | TTTTTTAATTGAGATAACAT+TGG | - | chr6_1:16861967-16861986 | Msa0877450:intron | 15.0% |
| !!! | ATTTATTATTATGACTAGTT+TGG | - | chr6_1:16862338-16862357 | Msa0877450:intron | 15.0% |
| !!! | TTTTATATAAGAACTAATTG+TGG | - | chr6_1:16862868-16862887 | Msa0877450:intron | 15.0% |
| !! | TTTCCAATTAAAAAAAATGA+AGG | - | chr6_1:16863099-16863118 | Msa0877450:CDS | 15.0% |
| !!! | TTACCTTCATTTTTTTTAAT+TGG | + | chr6_1:16863105-16863124 | None:intergenic | 15.0% |
| !!! | TTAGTTTTTGTATTGATTTT+AGG | - | chr6_1:16863813-16863832 | Msa0877450:intron | 15.0% |
| !! | TAAAAAAATTAGGAAGAAAA+TGG | - | chr6_1:16864821-16864840 | Msa0877450:intron | 15.0% |
| !!! | TTCTTTTTTTTTTTATCTCT+TGG | - | chr6_1:16864944-16864963 | Msa0877450:CDS | 15.0% |
| !!! | AATACCAAATTTTTCATTTT+CGG | - | chr6_1:16865611-16865630 | Msa0877450:intron | 15.0% |
| !!! | TTAAGTTGTTTATATAAACA+TGG | + | chr6_1:16866327-16866346 | None:intergenic | 15.0% |
| !!! | GTTTATAGTTTTTATGAAAA+CGG | + | chr6_1:16866418-16866437 | None:intergenic | 15.0% |
| !!! | ATTAAAATAGTTCTAAATTG+CGG | + | chr6_1:16867158-16867177 | None:intergenic | 15.0% |
| !!! | CAATTTAGAACTATTTTAAT+AGG | - | chr6_1:16867158-16867177 | Msa0877450:intron | 15.0% |
| !! | CGGTAATAATTTAAAAATAA+TGG | + | chr6_1:16867375-16867394 | None:intergenic | 15.0% |
| !! | ACAAACCTTTATAATTTAAA+AGG | + | chr6_1:16867516-16867535 | None:intergenic | 15.0% |
| !! | TCTTTATGATATTATCTATA+AGG | + | chr6_1:16867556-16867575 | None:intergenic | 15.0% |
| !! | AAAGTCAAAGTTAAAAAAAT+AGG | + | chr6_1:16867804-16867823 | None:intergenic | 15.0% |
| !!! | CTATTTAATAATTTCTTTTG+AGG | - | chr6_1:16868088-16868107 | Msa0877450:intron | 15.0% |
| !! | ATATGTTGAGTAAAAAATAG+CGG | - | chr6_1:16861492-16861511 | Msa0877450:intron | 20.0% |
| !! | TTATATTTGGCAAAAAATAG+CGG | - | chr6_1:16861776-16861795 | Msa0877450:intron | 20.0% |
| !! | GTGTTGTGTATATAAATTAA+GGG | + | chr6_1:16862180-16862199 | None:intergenic | 20.0% |
| !! | AGTGTTGTGTATATAAATTA+AGG | + | chr6_1:16862181-16862200 | None:intergenic | 20.0% |
| !!! | CTCTTAATATTTTTTTACAC+TGG | - | chr6_1:16862199-16862218 | Msa0877450:intron | 20.0% |
| !!! | TTAATATTTTTTTACACTGG+CGG | - | chr6_1:16862202-16862221 | Msa0877450:intron | 20.0% |
| !! | AATAAGCTGAAATCAATTTA+TGG | + | chr6_1:16862579-16862598 | None:intergenic | 20.0% |
| !! | ATTAATCACTTATAGCATAA+GGG | + | chr6_1:16862712-16862731 | None:intergenic | 20.0% |
| !! | ATTTATGCAATTAGAAAATG+AGG | - | chr6_1:16863469-16863488 | Msa0877450:intron | 20.0% |
| !! | TTTATGCAATTAGAAAATGA+GGG | - | chr6_1:16863470-16863489 | Msa0877450:intron | 20.0% |
| !!! | AAGTAACATTGTTATTTTGA+TGG | - | chr6_1:16863694-16863713 | Msa0877450:intron | 20.0% |
| !! | TCAAATAAGAAAATCAAAAC+AGG | - | chr6_1:16864529-16864548 | Msa0877450:intron | 20.0% |
| !!! | TATTTTTAATTACAGTCTCA+TGG | - | chr6_1:16864576-16864595 | Msa0877450:intron | 20.0% |
| !! | AATTCAACATGTTATATTAG+TGG | - | chr6_1:16865201-16865220 | Msa0877450:CDS | 20.0% |
| !! | TTCACATTATTATGTATATC+AGG | - | chr6_1:16865648-16865667 | Msa0877450:intron | 20.0% |
| !! | TCACATTATTATGTATATCA+GGG | - | chr6_1:16865649-16865668 | Msa0877450:intron | 20.0% |
| !! | CAATTAACTCAAATTAAGAA+AGG | + | chr6_1:16865801-16865820 | None:intergenic | 20.0% |
| !! | GAAAACTGAAAAAATAGAAA+AGG | + | chr6_1:16866060-16866079 | None:intergenic | 20.0% |
| !! | AAAATGAAAGACATTATTTC+TGG | - | chr6_1:16866181-16866200 | Msa0877450:intron | 20.0% |
| !!! | TTCAATATAAAGCTTTTAGA+GGG | + | chr6_1:16867115-16867134 | None:intergenic | 20.0% |
| !!! | TTTATTGCTTTTTACAGTTA+AGG | + | chr6_1:16867464-16867483 | None:intergenic | 20.0% |
| !!! | ATAATTTAAAAGGTACTCAT+GGG | + | chr6_1:16867506-16867525 | None:intergenic | 20.0% |
| !!! | TATAATTTAAAAGGTACTCA+TGG | + | chr6_1:16867507-16867526 | None:intergenic | 20.0% |
| !!! | GAGTACCTTTTAAATTATAA+AGG | - | chr6_1:16867508-16867527 | Msa0877450:intron | 20.0% |
| !!! | TAAAGAGATATAACAGTTTT+AGG | - | chr6_1:16867570-16867589 | Msa0877450:intron | 20.0% |
| !! | ACAAAAGAATTGATTGAAAA+TGG | + | chr6_1:16867764-16867783 | None:intergenic | 20.0% |
| !!! | TTTTCAATCAATTCTTTTGT+AGG | - | chr6_1:16867764-16867783 | Msa0877450:intron | 20.0% |
| !! | TTATGTGTAATAATTGTAGT+AGG | + | chr6_1:16868304-16868323 | None:intergenic | 20.0% |
| !! | AATACCTTTGTATAATTTAC+AGG | - | chr6_1:16868448-16868467 | Msa0877450:intron | 20.0% |
| !!! | TAAAAATTTTGCCAACTATT+TGG | - | chr6_1:16868584-16868603 | Msa0877450:intron | 20.0% |
| ! | TATTTGATAAGCTACCTTAT+CGG | - | chr6_1:16861516-16861535 | Msa0877450:intron | 25.0% |
| ! | GTAGTATTTGGTAAAATTAG+CGG | - | chr6_1:16861596-16861615 | Msa0877450:intron | 25.0% |
| ! | AGTTTATTGTAGTAAGCTAT+AGG | - | chr6_1:16861753-16861772 | Msa0877450:intron | 25.0% |
| ! | AGTAAGCTATAGGTTATATT+TGG | - | chr6_1:16861763-16861782 | Msa0877450:intron | 25.0% |
| ! | TGTGTATATAAATTAAGGGT+AGG | + | chr6_1:16862176-16862195 | None:intergenic | 25.0% |
| !!! | TTAGTTAATTTGTCGTCTTT+TGG | - | chr6_1:16862438-16862457 | Msa0877450:intron | 25.0% |
| !!! | TAGTTAATTTGTCGTCTTTT+GGG | - | chr6_1:16862439-16862458 | Msa0877450:intron | 25.0% |
| ! | TTAGAATTCAGAATTCAGTT+AGG | - | chr6_1:16862465-16862484 | Msa0877450:intron | 25.0% |
| !! | AATTCAGTTAGGATTTTCTT+AGG | - | chr6_1:16862476-16862495 | Msa0877450:intron | 25.0% |
| !! | ATTCAGTTAGGATTTTCTTA+GGG | - | chr6_1:16862477-16862496 | Msa0877450:intron | 25.0% |
| ! | CATAAACTATTTAGAGAGTA+TGG | + | chr6_1:16862603-16862622 | None:intergenic | 25.0% |
| ! | CATTAATCACTTATAGCATA+AGG | + | chr6_1:16862713-16862732 | None:intergenic | 25.0% |
| ! | CTGGAAAAATGTTTATAACT+GGG | - | chr6_1:16862918-16862937 | Msa0877450:intron | 25.0% |
| !! | TCACTTGTAAACATTGTTTT+GGG | + | chr6_1:16862994-16863013 | None:intergenic | 25.0% |
| ! | TTTGTATATATGCAGATGAT+TGG | - | chr6_1:16863146-16863165 | Msa0877450:CDS | 25.0% |
| !! | CTTTTTCTAAACAAACAAAC+TGG | + | chr6_1:16863230-16863249 | None:intergenic | 25.0% |
| ! | AAAGTGAAAAACAGTTATTC+TGG | - | chr6_1:16863347-16863366 | Msa0877450:intron | 25.0% |
| ! | CCAACAAATCAATAATTTAG+CGG | + | chr6_1:16863643-16863662 | None:intergenic | 25.0% |
| ! | TATTAAATTCTTGTGATGCA+AGG | - | chr6_1:16863671-16863690 | Msa0877450:intron | 25.0% |
| ! | TTGTAGTATAATGTTGTGTT+TGG | - | chr6_1:16863959-16863978 | Msa0877450:intron | 25.0% |
| ! | AAATAAGCTGTAAATGCTTA+TGG | - | chr6_1:16864440-16864459 | Msa0877450:intron | 25.0% |
| ! | AAGTGTAAGGTAATGATTAA+TGG | - | chr6_1:16864727-16864746 | Msa0877450:intron | 25.0% |
| !! | AAGGTAATGATTAATGGATA+TGG | - | chr6_1:16864733-16864752 | Msa0877450:intron | 25.0% |
| ! | AGTCAATAAGGTTAATGTTA+TGG | + | chr6_1:16864789-16864808 | None:intergenic | 25.0% |
| ! | AAAAATTAGGAAGAAAATGG+AGG | - | chr6_1:16864824-16864843 | Msa0877450:intron | 25.0% |
| ! | TTACTTGCTTATGAAATGAA+TGG | - | chr6_1:16864902-16864921 | Msa0877450:intron | 25.0% |
| !! | GCTCATTTTGAATTCAAAAA+AGG | - | chr6_1:16865295-16865314 | Msa0877450:intron | 25.0% |
| !! | TTTTTCTTTAGCCTCTTAAT+AGG | - | chr6_1:16865460-16865479 | Msa0877450:intron | 25.0% |
| !! | TTTTCTTTAGCCTCTTAATA+GGG | - | chr6_1:16865461-16865480 | Msa0877450:intron | 25.0% |
| ! | CATTCCGAAAATGAAAAATT+TGG | + | chr6_1:16865618-16865637 | None:intergenic | 25.0% |
| ! | ATAATAATGTGAAGCTCTTA+GGG | + | chr6_1:16865641-16865660 | None:intergenic | 25.0% |
| ! | ATAATAAGAATACCTGAACA+GGG | + | chr6_1:16865765-16865784 | None:intergenic | 25.0% |
| ! | AATAATAAGAATACCTGAAC+AGG | + | chr6_1:16865766-16865785 | None:intergenic | 25.0% |
| !! | AATGATGATGTGTATATGAT+AGG | - | chr6_1:16866004-16866023 | Msa0877450:intron | 25.0% |
| ! | GGAAATCAAATATATACAAG+AGG | + | chr6_1:16866231-16866250 | None:intergenic | 25.0% |
| ! | TTGATTTCCAAATTTCCATT+AGG | - | chr6_1:16866242-16866261 | Msa0877450:intron | 25.0% |
| ! | TGATTTCCAAATTTCCATTA+GGG | - | chr6_1:16866243-16866262 | Msa0877450:intron | 25.0% |
| !!! | TGTTTCTATTGCTTTTATTG+AGG | + | chr6_1:16866538-16866557 | None:intergenic | 25.0% |
| ! | TCAATAAAAGCAATAGAAAC+AGG | - | chr6_1:16866537-16866556 | Msa0877450:intron | 25.0% |
| ! | CATATAAGATCATGATGATA+TGG | - | chr6_1:16866940-16866959 | Msa0877450:intron | 25.0% |
| !! | CTTCAATATAAAGCTTTTAG+AGG | + | chr6_1:16867116-16867135 | None:intergenic | 25.0% |
| ! | ATTCTTATAGCAGCTAAATT+GGG | + | chr6_1:16867207-16867226 | None:intergenic | 25.0% |
| ! | TATTTAGCACCATATTGAAT+AGG | - | chr6_1:16867908-16867927 | Msa0877450:intron | 25.0% |
| ! | ATATATTATACTCCACAATG+GGG | + | chr6_1:16867937-16867956 | None:intergenic | 25.0% |
| ! | CATATATTATACTCCACAAT+GGG | + | chr6_1:16867938-16867957 | None:intergenic | 25.0% |
| ! | CATTGTGGAGTATAATATAT+GGG | - | chr6_1:16867937-16867956 | Msa0877450:intron | 25.0% |
| ! | TCTACCTGTAAATTATACAA+AGG | + | chr6_1:16868455-16868474 | None:intergenic | 25.0% |
| !! | GTTGAGAATTTTCATACAAT+TGG | + | chr6_1:16868663-16868682 | None:intergenic | 25.0% |
| ! | ACTATAACTTAGTTTCATCA+TGG | - | chr6_1:16868758-16868777 | Msa0877450:five_prime_UTR | 25.0% |
| ! | TTACTGTGATATAATAAGCA+TGG | - | chr6_1:16868783-16868802 | Msa0877450:five_prime_UTR | 25.0% |
| ATGATAAAGACAATGGTCTT+TGG | + | chr6_1:16861046-16861065 | None:intergenic | 30.0% | |
| AGAGATGATGATAAAGACAA+TGG | + | chr6_1:16861053-16861072 | None:intergenic | 30.0% | |
| !!! | TGTTTTGTTTTGTTCTTCAC+AGG | - | chr6_1:16861267-16861286 | Msa0877450:exon | 30.0% |
| CTCTTATAGAAGAAATCTGA+AGG | + | chr6_1:16861346-16861365 | None:intergenic | 30.0% | |
| CTTCAGATTTCTTCTATAAG+AGG | - | chr6_1:16861344-16861363 | Msa0877450:CDS | 30.0% | |
| TTCTTCTATAAGAGGAATCA+TGG | - | chr6_1:16861352-16861371 | Msa0877450:CDS | 30.0% | |
| CGGATTGAATTTGTAGTATT+TGG | - | chr6_1:16861584-16861603 | Msa0877450:intron | 30.0% | |
| TCCACTTTATGCTAACTTAT+TGG | + | chr6_1:16861806-16861825 | None:intergenic | 30.0% | |
| CCAAACACTACAAATTCAAT+CGG | + | chr6_1:16861878-16861897 | None:intergenic | 30.0% | |
| AGCTTCAAAAAACGATAAGT+CGG | - | chr6_1:16862034-16862053 | Msa0877450:intron | 30.0% | |
| TCGATAAATCACAACAAATG+TGG | + | chr6_1:16862278-16862297 | None:intergenic | 30.0% | |
| ATTTATGAACAGATACTGTG+TGG | - | chr6_1:16862362-16862381 | Msa0877450:intron | 30.0% | |
| CAATTTATTTCCAGTCTCAA+TGG | + | chr6_1:16862548-16862567 | None:intergenic | 30.0% | |
| TGAAGTTGCTTATCGAAAAT+TGG | - | chr6_1:16862731-16862750 | Msa0877450:intron | 30.0% | |
| ! | GTGATTATTGTTGTTCATTC+AGG | - | chr6_1:16862806-16862825 | Msa0877450:intron | 30.0% |
| ! | CCAGTTATAAACATTTTTCC+AGG | + | chr6_1:16862920-16862939 | None:intergenic | 30.0% |
| CCTGGAAAAATGTTTATAAC+TGG | - | chr6_1:16862917-16862936 | Msa0877450:intron | 30.0% | |
| ! | CTCACTTGTAAACATTGTTT+TGG | + | chr6_1:16862995-16863014 | None:intergenic | 30.0% |
| ! | AAAGTCTAAGGATTTGAGTT+TGG | + | chr6_1:16863067-16863086 | None:intergenic | 30.0% |
| AATAGCTTCTACAAAGTCTA+AGG | + | chr6_1:16863079-16863098 | None:intergenic | 30.0% | |
| TGCATATATACAAACTACAG+AGG | + | chr6_1:16863140-16863159 | None:intergenic | 30.0% | |
| TATATATGCAGATGATTGGT+AGG | - | chr6_1:16863150-16863169 | Msa0877450:CDS | 30.0% | |
| ATATATGCAGATGATTGGTA+GGG | - | chr6_1:16863151-16863170 | Msa0877450:CDS | 30.0% | |
| !!! | GGTTTTATTAAAGAGAAGTG+AGG | + | chr6_1:16863198-16863217 | None:intergenic | 30.0% |
| ! | AAAGTGCTTAGTTAAAACCT+TGG | - | chr6_1:16863246-16863265 | Msa0877450:intron | 30.0% |
| AAACAGTTATTCTGGATACT+CGG | - | chr6_1:16863355-16863374 | Msa0877450:intron | 30.0% | |
| AATTAAGCACCTATTCCATA+AGG | - | chr6_1:16863409-16863428 | Msa0877450:intron | 30.0% | |
| ATAGTAACCATATGTCCTTA+TGG | + | chr6_1:16863427-16863446 | None:intergenic | 30.0% | |
| ATAAGGACATATGGTTACTA+TGG | - | chr6_1:16863426-16863445 | Msa0877450:intron | 30.0% | |
| !!! | ATGCCATAAGCTATTTTTGT+AGG | - | chr6_1:16863551-16863570 | Msa0877450:intron | 30.0% |
| !! | CCGCTAAATTATTGATTTGT+TGG | - | chr6_1:16863640-16863659 | Msa0877450:intron | 30.0% |
| !!! | AACATTGTTATTTTGATGGC+AGG | - | chr6_1:16863698-16863717 | Msa0877450:intron | 30.0% |
| TAATCCTATATCCTCGAAAT+AGG | - | chr6_1:16864042-16864061 | Msa0877450:intron | 30.0% | |
| AATCCTATATCCTCGAAATA+GGG | - | chr6_1:16864043-16864062 | Msa0877450:intron | 30.0% | |
| !! | AAAGGGTTGAATTTTAACAG+TGG | - | chr6_1:16864070-16864089 | Msa0877450:intron | 30.0% |
| TTAGGCCAGAATCTTTATAT+TGG | + | chr6_1:16864133-16864152 | None:intergenic | 30.0% | |
| AATATAAAGATTCTGGCCTA+AGG | - | chr6_1:16864132-16864151 | Msa0877450:CDS | 30.0% | |
| ATATAAAGATTCTGGCCTAA+GGG | - | chr6_1:16864133-16864152 | Msa0877450:CDS | 30.0% | |
| !! | TTAAGTTGAACATCCAAACA+AGG | + | chr6_1:16864304-16864323 | None:intergenic | 30.0% |
| ! | ACTATTTTCATAACCTATCC+TGG | - | chr6_1:16864406-16864425 | Msa0877450:intron | 30.0% |
| !! | TGTAAGCATTGATAAGTGTA+AGG | - | chr6_1:16864714-16864733 | Msa0877450:intron | 30.0% |
| AAGATCAAAAGGAGTCAATA+AGG | + | chr6_1:16864801-16864820 | None:intergenic | 30.0% | |
| ! | TTATTTTCTGTTTGTCCTCT+AGG | - | chr6_1:16865018-16865037 | Msa0877450:intron | 30.0% |
| ! | GAATTCTGTTTGCTGATATT+AGG | - | chr6_1:16865241-16865260 | Msa0877450:intron | 30.0% |
| GCTGATATTAGGACATAATT+AGG | - | chr6_1:16865252-16865271 | Msa0877450:intron | 30.0% | |
| ! | TTCATTTTCTTCTTCCTCTT+CGG | - | chr6_1:16865411-16865430 | Msa0877450:intron | 30.0% |
| CATAATAATGTGAAGCTCTT+AGG | + | chr6_1:16865642-16865661 | None:intergenic | 30.0% | |
| TGAATTGGGACAATATTGAT+TGG | - | chr6_1:16865713-16865732 | Msa0877450:intron | 30.0% | |
| !! | ACTTACTCTAAAGTACAAAC+TGG | + | chr6_1:16865831-16865850 | None:intergenic | 30.0% |
| ACAAGGAAACAAATACTCAT+CGG | + | chr6_1:16865918-16865937 | None:intergenic | 30.0% | |
| ATGAGTATTTGTTTCCTTGT+GGG | - | chr6_1:16865918-16865937 | Msa0877450:CDS | 30.0% | |
| TTAAATAAACTAACCTTCCC+AGG | + | chr6_1:16865986-16866005 | None:intergenic | 30.0% | |
| TTATGTCCCTAATGGAAATT+TGG | + | chr6_1:16866252-16866271 | None:intergenic | 30.0% | |
| CATCAAATTTATGTCCCTAA+TGG | + | chr6_1:16866260-16866279 | None:intergenic | 30.0% | |
| ATATAAACATGGCCTATGTA+CGG | + | chr6_1:16866316-16866335 | None:intergenic | 30.0% | |
| CATTCTTATAGCAGCTAAAT+TGG | + | chr6_1:16867208-16867227 | None:intergenic | 30.0% | |
| CAATTTAGCTGCTATAAGAA+TGG | - | chr6_1:16867206-16867225 | Msa0877450:intron | 30.0% | |
| CATTATTGTACACTGAAAAG+TGG | + | chr6_1:16867245-16867264 | None:intergenic | 30.0% | |
| !! | CTGATTTTGACATGTAATAC+CGG | + | chr6_1:16867395-16867414 | None:intergenic | 30.0% |
| TGTTAATGAAACCAAAGTGT+AGG | - | chr6_1:16867705-16867724 | Msa0877450:intron | 30.0% | |
| AATAGTTGAGCATAGTAAAG+AGG | - | chr6_1:16867735-16867754 | Msa0877450:intron | 30.0% | |
| ATAGTTGAGCATAGTAAAGA+GGG | - | chr6_1:16867736-16867755 | Msa0877450:intron | 30.0% | |
| !!! | TTTTTTTAGACCATCCACAA+TGG | - | chr6_1:16867872-16867891 | Msa0877450:intron | 30.0% |
| TATATTATACTCCACAATGG+GGG | + | chr6_1:16867936-16867955 | None:intergenic | 30.0% | |
| CCATATATTATACTCCACAA+TGG | + | chr6_1:16867939-16867958 | None:intergenic | 30.0% | |
| CCATTGTGGAGTATAATATA+TGG | - | chr6_1:16867936-16867955 | Msa0877450:intron | 30.0% | |
| !! | TCTCTCTCTTCATTTTTCAT+GGG | - | chr6_1:16867993-16868012 | Msa0877450:intron | 30.0% |
| TAATTTAAGCACCCAGATTA+AGG | - | chr6_1:16868179-16868198 | Msa0877450:intron | 30.0% | |
| AATTGTGAATAGAGTAGAGT+CGG | - | chr6_1:16868234-16868253 | Msa0877450:intron | 30.0% | |
| !! | TCTAAATCGTACCGATTAAT+GGG | - | chr6_1:16868278-16868297 | Msa0877450:intron | 30.0% |
| AAATGAGTTCATTTGCATGA+CGG | - | chr6_1:16868363-16868382 | Msa0877450:intron | 30.0% | |
| AAGTGTTTAATATCCCTCTA+AGG | + | chr6_1:16868523-16868542 | None:intergenic | 30.0% | |
| TATTAAACACTTCATGGCAT+CGG | - | chr6_1:16868531-16868550 | Msa0877450:CDS | 30.0% | |
| AATATCATCGACCAAATAGT+TGG | + | chr6_1:16868598-16868617 | None:intergenic | 30.0% | |
| ! | TATAATAAGCATGGAGCATT+TGG | - | chr6_1:16868792-16868811 | Msa0877450:five_prime_UTR | 30.0% |
| ATGAAAACAGAGTGAGTTAG+TGG | + | chr6_1:16861083-16861102 | None:intergenic | 35.0% | |
| ! | GTTAATCCTGGCATTGTTTT+TGG | + | chr6_1:16861115-16861134 | None:intergenic | 35.0% |
| !! | TTGGAGTTGATTTGAAGAGA+AGG | + | chr6_1:16861175-16861194 | None:intergenic | 35.0% |
| TTCTCTTCAAATCAACTCCA+AGG | - | chr6_1:16861174-16861193 | Msa0877450:three_prime_UTR | 35.0% | |
| AAGAGAATCAATCAGTGTGT+TGG | + | chr6_1:16861212-16861231 | None:intergenic | 35.0% | |
| ATATCATCAACGATGGGAAT+AGG | + | chr6_1:16861379-16861398 | None:intergenic | 35.0% | |
| CTGTTGATATCATCAACGAT+GGG | + | chr6_1:16861385-16861404 | None:intergenic | 35.0% | |
| !! | GTTGATGATATCAACAGGTT+CGG | - | chr6_1:16861388-16861407 | Msa0877450:intron | 35.0% |
| GCCAATAAGTTAGCATAAAG+TGG | - | chr6_1:16861802-16861821 | Msa0877450:intron | 35.0% | |
| CCGATTGAATTTGTAGTGTT+TGG | - | chr6_1:16861875-16861894 | Msa0877450:intron | 35.0% | |
| GTAGTGTTTGGTAAGATTAG+CGG | - | chr6_1:16861887-16861906 | Msa0877450:intron | 35.0% | |
| AGATACTGTGTGGAAATATC+TGG | - | chr6_1:16862372-16862391 | Msa0877450:intron | 35.0% | |
| ATCTTTCATATAGAGCCGTT+TGG | + | chr6_1:16862412-16862431 | None:intergenic | 35.0% | |
| GGCTCTATATGAAAGATATC+AGG | - | chr6_1:16862415-16862434 | Msa0877450:intron | 35.0% | |
| ACATAAACAACCATTGAGAC+TGG | - | chr6_1:16862535-16862554 | Msa0877450:intron | 35.0% | |
| ! | TATTGTTGTTCATTCAGGAG+AGG | - | chr6_1:16862811-16862830 | Msa0877450:intron | 35.0% |
| ! | ATTGTTGTTCATTCAGGAGA+GGG | - | chr6_1:16862812-16862831 | Msa0877450:intron | 35.0% |
| TTGCATATCCACAATACACT+GGG | - | chr6_1:16862948-16862967 | Msa0877450:intron | 35.0% | |
| GGGCCATATTAGATAAGATA+TGG | - | chr6_1:16862968-16862987 | Msa0877450:intron | 35.0% | |
| GGGCCATATCTTATCTAATA+TGG | + | chr6_1:16862974-16862993 | None:intergenic | 35.0% | |
| !! | TATCTTTCAAGCCGATTTTG+TGG | - | chr6_1:16863025-16863044 | Msa0877450:CDS | 35.0% |
| !! | ATCTTTCAAGCCGATTTTGT+GGG | - | chr6_1:16863026-16863045 | Msa0877450:CDS | 35.0% |
| AACAGTTATTCTGGATACTC+GGG | - | chr6_1:16863356-16863375 | Msa0877450:intron | 35.0% | |
| TGGATACTCGGGATAAATTA+GGG | - | chr6_1:16863367-16863386 | Msa0877450:intron | 35.0% | |
| ACCTATTCCATAAGGACATA+TGG | - | chr6_1:16863417-16863436 | Msa0877450:intron | 35.0% | |
| ACCATATGTCCTTATGGAAT+AGG | + | chr6_1:16863421-16863440 | None:intergenic | 35.0% | |
| GAGCCTACAAAAATAGCTTA+TGG | + | chr6_1:16863557-16863576 | None:intergenic | 35.0% | |
| ! | TCAATAATTTAGCGGACGTT+TGG | + | chr6_1:16863635-16863654 | None:intergenic | 35.0% |
| GTGGCAGTTACATTATACTT+CGG | + | chr6_1:16863730-16863749 | None:intergenic | 35.0% | |
| !!! | AAATGGAGCATTGGTTGTTT+TGG | - | chr6_1:16863785-16863804 | Msa0877450:intron | 35.0% |
| ! | GATGTTTCTGCTATTGGAAA+TGG | - | chr6_1:16863930-16863949 | Msa0877450:intron | 35.0% |
| GAATCTTTATATTGGCGGAA+TGG | + | chr6_1:16864125-16864144 | None:intergenic | 35.0% | |
| TTCCGCCAATATAAAGATTC+TGG | - | chr6_1:16864125-16864144 | Msa0877450:CDS | 35.0% | |
| TATAAAGATTCTGGCCTAAG+GGG | - | chr6_1:16864134-16864153 | Msa0877450:CDS | 35.0% | |
| ! | TCTTAGACCTTTTATGAGTC+AGG | - | chr6_1:16864171-16864190 | Msa0877450:intron | 35.0% |
| ! | CTTAGACCTTTTATGAGTCA+GGG | - | chr6_1:16864172-16864191 | Msa0877450:intron | 35.0% |
| TAACTACCCTGACTCATAAA+AGG | + | chr6_1:16864181-16864200 | None:intergenic | 35.0% | |
| ! | TTTTATGAGTCAGGGTAGTT+AGG | - | chr6_1:16864180-16864199 | Msa0877450:intron | 35.0% |
| ACTTGTATTTGATCTCTGGA+TGG | - | chr6_1:16864227-16864246 | Msa0877450:intron | 35.0% | |
| TCTCTAGCTAAGCATTCAAA+GGG | + | chr6_1:16864278-16864297 | None:intergenic | 35.0% | |
| ! | TTTTTGTTCTCTCAGCTGTT+TGG | - | chr6_1:16864602-16864621 | Msa0877450:intron | 35.0% |
| ! | TTTTGTTCTCTCAGCTGTTT+GGG | - | chr6_1:16864603-16864622 | Msa0877450:intron | 35.0% |
| TTCAAGAACATCAGCCAATT+TGG | + | chr6_1:16864635-16864654 | None:intergenic | 35.0% | |
| ! | TTGACTAGTGTCACTCAATT+TGG | - | chr6_1:16864673-16864692 | Msa0877450:intron | 35.0% |
| AGAAAATGGAGGACCATATA+AGG | - | chr6_1:16864835-16864854 | Msa0877450:intron | 35.0% | |
| ! | AGTGGTATTGAAGCCTTATA+TGG | + | chr6_1:16864851-16864870 | None:intergenic | 35.0% |
| CAAGTAAAACATCTGCTTCA+GGG | + | chr6_1:16864889-16864908 | None:intergenic | 35.0% | |
| AATACGTCATATATCAGACC+TGG | + | chr6_1:16865581-16865600 | None:intergenic | 35.0% | |
| ATATTGTCCCAATTCACTGA+TGG | + | chr6_1:16865709-16865728 | None:intergenic | 35.0% | |
| ! | ACAATATTGATTGGTCAACC+AGG | - | chr6_1:16865722-16865741 | Msa0877450:intron | 35.0% |
| GATGAGTATTTGTTTCCTTG+TGG | - | chr6_1:16865917-16865936 | Msa0877450:CDS | 35.0% | |
| GCAGTGTGTTATATGTTCTT+TGG | - | chr6_1:16865940-16865959 | Msa0877450:CDS | 35.0% | |
| TGTGTCATATTGGAAGTCAA+AGG | + | chr6_1:16866283-16866302 | None:intergenic | 35.0% | |
| ! | TAGTCTTGCTTGTGTCATAT+TGG | + | chr6_1:16866293-16866312 | None:intergenic | 35.0% |
| AAGCTGTTATGAAGAGCTTA+TGG | - | chr6_1:16866447-16866466 | Msa0877450:intron | 35.0% | |
| GTTGTGCAGGTAAAAATTAG+CGG | - | chr6_1:16866610-16866629 | Msa0877450:intron | 35.0% | |
| AAGCCTCAAGATCTCAAAAA+AGG | - | chr6_1:16866707-16866726 | Msa0877450:intron | 35.0% | |
| AGCCTCAAGATCTCAAAAAA+GGG | - | chr6_1:16866708-16866727 | Msa0877450:intron | 35.0% | |
| TACGAGACTGTCAAGATATT+TGG | - | chr6_1:16866883-16866902 | Msa0877450:intron | 35.0% | |
| TTTGGAGAGAGAAAATCTGA+TGG | - | chr6_1:16866901-16866920 | Msa0877450:intron | 35.0% | |
| AATCTTGTCCTCTTGTTAGT+AGG | - | chr6_1:16866966-16866985 | Msa0877450:intron | 35.0% | |
| GTAGGCATGATTCTCAATTA+CGG | - | chr6_1:16866984-16867003 | Msa0877450:intron | 35.0% | |
| CTCAATTACGGTTGCAATTA+CGG | - | chr6_1:16866996-16867015 | Msa0877450:intron | 35.0% | |
| GCTGCTATAAGAATGGAAAA+TGG | - | chr6_1:16867213-16867232 | Msa0877450:intron | 35.0% | |
| AATGAAACCAAAGTGTAGGT+TGG | - | chr6_1:16867709-16867728 | Msa0877450:intron | 35.0% | |
| TATTCTTCCAACCTACACTT+TGG | + | chr6_1:16867719-16867738 | None:intergenic | 35.0% | |
| !! | CTCTCTCTCTTCATTTTTCA+TGG | - | chr6_1:16867992-16868011 | Msa0877450:intron | 35.0% |
| !!! | ATAATTTCTTTTGAGGCGCT+AGG | - | chr6_1:16868095-16868114 | Msa0877450:intron | 35.0% |
| ! | ACAATAGAGCACCTTAATCT+GGG | + | chr6_1:16868193-16868212 | None:intergenic | 35.0% |
| !! | CTCTAAATCGTACCGATTAA+TGG | - | chr6_1:16868277-16868296 | Msa0877450:intron | 35.0% |
| ATTGTAGTAGGCCCATTAAT+CGG | + | chr6_1:16868292-16868311 | None:intergenic | 35.0% | |
| AATCACCACTCTAATTGAGT+TGG | - | chr6_1:16868395-16868414 | Msa0877450:intron | 35.0% | |
| ATCACCACTCTAATTGAGTT+GGG | - | chr6_1:16868396-16868415 | Msa0877450:intron | 35.0% | |
| TGCAAATGTTCAACCTGAAA+AGG | - | chr6_1:16868481-16868500 | Msa0877450:CDS | 35.0% | |
| GAGGGATATTAAACACTTCA+TGG | - | chr6_1:16868525-16868544 | Msa0877450:CDS | 35.0% | |
| ATTAAACACTTCATGGCATC+GGG | - | chr6_1:16868532-16868551 | Msa0877450:CDS | 35.0% | |
| ACTGAACTCTGAATATGCAT+CGG | - | chr6_1:16868635-16868654 | Msa0877450:intron | 35.0% | |
| GAATAAGCCTTAGAGCTAAA+GGG | - | chr6_1:16868685-16868704 | Msa0877450:CDS | 35.0% | |
| !!! | AATCCTGGCATTGTTTTTGG+AGG | + | chr6_1:16861112-16861131 | None:intergenic | 40.0% |
| !! | GGTTCTTTGGAATAGTCTGA+TGG | + | chr6_1:16861142-16861161 | None:intergenic | 40.0% |
| ATTTGAAGAGAAGGATGACG+TGG | + | chr6_1:16861166-16861185 | None:intergenic | 40.0% | |
| GTTGGTGTGATTGATTACCT+TGG | + | chr6_1:16861194-16861213 | None:intergenic | 40.0% | |
| CCTGTTGATATCATCAACGA+TGG | + | chr6_1:16861386-16861405 | None:intergenic | 40.0% | |
| !! | CCATCGTTGATGATATCAAC+AGG | - | chr6_1:16861383-16861402 | Msa0877450:intron | 40.0% |
| CGCTATAAGTTCATCCGATA+AGG | + | chr6_1:16861533-16861552 | None:intergenic | 40.0% | |
| ! | GTTTAGAGCAGATAAGCTAG+CGG | - | chr6_1:16861564-16861583 | Msa0877450:intron | 40.0% |
| !! | TGTGGAAATATCTGGTCTTG+TGG | - | chr6_1:16862380-16862399 | Msa0877450:intron | 40.0% |
| !! | GTGGAAATATCTGGTCTTGT+GGG | - | chr6_1:16862381-16862400 | Msa0877450:intron | 40.0% |
| ! | GGATTTTCTTAGGGTCGATT+TGG | - | chr6_1:16862486-16862505 | Msa0877450:intron | 40.0% |
| CTTGCATATCCACAATACAC+TGG | - | chr6_1:16862947-16862966 | Msa0877450:intron | 40.0% | |
| TAATATGGCCCAGTGTATTG+TGG | + | chr6_1:16862959-16862978 | None:intergenic | 40.0% | |
| !! | TCTTTCAAGCCGATTTTGTG+GGG | - | chr6_1:16863027-16863046 | Msa0877450:CDS | 40.0% |
| CAAACAAACTGGAATGCAGA+GGG | + | chr6_1:16863219-16863238 | None:intergenic | 40.0% | |
| ACAAACAAACTGGAATGCAG+AGG | + | chr6_1:16863220-16863239 | None:intergenic | 40.0% | |
| CAAGTCAAGTGTCATAACCA+AGG | + | chr6_1:16863266-16863285 | None:intergenic | 40.0% | |
| CTGGATACTCGGGATAAATT+AGG | - | chr6_1:16863366-16863385 | Msa0877450:intron | 40.0% | |
| GGGATAAATTAGGGATGTCT+GGG | - | chr6_1:16863376-16863395 | Msa0877450:intron | 40.0% | |
| TAATGTAACTGCCACAATGC+AGG | - | chr6_1:16863735-16863754 | Msa0877450:intron | 40.0% | |
| !! | CTTGCTAGCGTTGATTGAAA+TGG | - | chr6_1:16863768-16863787 | Msa0877450:intron | 40.0% |
| ! | CGTTGATTGAAATGGAGCAT+TGG | - | chr6_1:16863776-16863795 | Msa0877450:intron | 40.0% |
| CTTCCCTATTTCGAGGATAT+AGG | + | chr6_1:16864049-16864068 | None:intergenic | 40.0% | |
| TCCTCGAAATAGGGAAGTAA+AGG | - | chr6_1:16864052-16864071 | Msa0877450:intron | 40.0% | |
| CCTCGAAATAGGGAAGTAAA+GGG | - | chr6_1:16864053-16864072 | Msa0877450:intron | 40.0% | |
| TTTATATTGGCGGAATGGAG+TGG | + | chr6_1:16864120-16864139 | None:intergenic | 40.0% | |
| GGCCAGAATCTTTATATTGG+CGG | + | chr6_1:16864130-16864149 | None:intergenic | 40.0% | |
| CATTGTTTCAAACACCCCTT+AGG | + | chr6_1:16864151-16864170 | None:intergenic | 40.0% | |
| AGGTTTCTTTGCTAGCACTT+CGG | + | chr6_1:16864206-16864225 | None:intergenic | 40.0% | |
| CCAGAGATCAAATACAAGTC+AGG | + | chr6_1:16864226-16864245 | None:intergenic | 40.0% | |
| ! | CCTGACTTGTATTTGATCTC+TGG | - | chr6_1:16864223-16864242 | Msa0877450:intron | 40.0% |
| ! | AGGGCATCTATGTTTCATTG+AGG | + | chr6_1:16864259-16864278 | None:intergenic | 40.0% |
| GTCTCTAGCTAAGCATTCAA+AGG | + | chr6_1:16864279-16864298 | None:intergenic | 40.0% | |
| TAGCTAGAGACAACCTTGTT+TGG | - | chr6_1:16864288-16864307 | Msa0877450:CDS | 40.0% | |
| CTTATTTCCATAAGCTCTCC+AGG | + | chr6_1:16864427-16864446 | None:intergenic | 40.0% | |
| CCTATATCATAAGCACTCGA+GGG | + | chr6_1:16864503-16864522 | None:intergenic | 40.0% | |
| TCCTATATCATAAGCACTCG+AGG | + | chr6_1:16864504-16864523 | None:intergenic | 40.0% | |
| TTTGTTCTCTCAGCTGTTTG+GGG | - | chr6_1:16864604-16864623 | Msa0877450:intron | 40.0% | |
| GCTGATGTTCTTGAACTTGT+TGG | - | chr6_1:16864640-16864659 | Msa0877450:intron | 40.0% | |
| TGAGTGACACTAGTCAACTT+TGG | + | chr6_1:16864670-16864689 | None:intergenic | 40.0% | |
| ! | ACTAGTGTCACTCAATTTGG+AGG | - | chr6_1:16864676-16864695 | Msa0877450:intron | 40.0% |
| !! | TATGGCTTGTGCATGTTTTC+TGG | - | chr6_1:16864751-16864770 | Msa0877450:intron | 40.0% |
| GCAAGTAAAACATCTGCTTC+AGG | + | chr6_1:16864890-16864909 | None:intergenic | 40.0% | |
| CTTCTTCCTCTTCGGAAATT+CGG | - | chr6_1:16865419-16865438 | Msa0877450:intron | 40.0% | |
| AAGAATCCGAATTTCCGAAG+AGG | + | chr6_1:16865428-16865447 | None:intergenic | 40.0% | |
| TAGCCTCTTAATAGGGATCA+TGG | - | chr6_1:16865468-16865487 | Msa0877450:intron | 40.0% | |
| AGCCTCTTAATAGGGATCAT+GGG | - | chr6_1:16865469-16865488 | Msa0877450:intron | 40.0% | |
| TACCCATGATCCCTATTAAG+AGG | + | chr6_1:16865474-16865493 | None:intergenic | 40.0% | |
| CAGGAACAACAACACGTAAT+GGG | + | chr6_1:16865497-16865516 | None:intergenic | 40.0% | |
| TATCATTGCAGAAGAATGCC+AGG | - | chr6_1:16865560-16865579 | Msa0877450:intron | 40.0% | |
| TCAGGGTTTCTTCATGCAAA+AGG | - | chr6_1:16865666-16865685 | Msa0877450:intron | 40.0% | |
| TGAACAGGGAAATCCATTTG+GGG | + | chr6_1:16865751-16865770 | None:intergenic | 40.0% | |
| CTGAACAGGGAAATCCATTT+GGG | + | chr6_1:16865752-16865771 | None:intergenic | 40.0% | |
| TGAACACTTGTGAGACTGTT+TGG | + | chr6_1:16866502-16866521 | None:intergenic | 40.0% | |
| !! | GTTGACTTGAGTCCTAATTC+TGG | - | chr6_1:16866582-16866601 | Msa0877450:intron | 40.0% |
| GCACAACATATGCCAGAATT+AGG | + | chr6_1:16866597-16866616 | None:intergenic | 40.0% | |
| AATTCTGGCATATGTTGTGC+AGG | - | chr6_1:16866597-16866616 | Msa0877450:intron | 40.0% | |
| AGAGTAGATGTGTCTGTTGA+TGG | - | chr6_1:16866667-16866686 | Msa0877450:intron | 40.0% | |
| GCCTCAAGATCTCAAAAAAG+GGG | - | chr6_1:16866709-16866728 | Msa0877450:intron | 40.0% | |
| !!! | TTGGGTGCTTTTTGAAGTCA+CGG | - | chr6_1:16866774-16866793 | Msa0877450:intron | 40.0% |
| CACAGAGATTATTGCGAAAG+CGG | - | chr6_1:16866813-16866832 | Msa0877450:intron | 40.0% | |
| GAATCATGCCTACTAACAAG+AGG | + | chr6_1:16866977-16866996 | None:intergenic | 40.0% | |
| TGCAATTACGGTTGCAATCA+CGG | - | chr6_1:16867008-16867027 | Msa0877450:intron | 40.0% | |
| ! | TGCATTTTGCTGCAGTATCA+AGG | + | chr6_1:16867060-16867079 | None:intergenic | 40.0% |
| TGGGATATGTAACACTTTCG+AGG | + | chr6_1:16867188-16867207 | None:intergenic | 40.0% | |
| AGACATGACACTGATACATG+TGG | - | chr6_1:16867326-16867345 | Msa0877450:intron | 40.0% | |
| !! | TTAAAAGGTACTCATGGGTG+AGG | + | chr6_1:16867501-16867520 | None:intergenic | 40.0% |
| GCAACTCAATTATGATCCAC+AGG | - | chr6_1:16867615-16867634 | Msa0877450:intron | 40.0% | |
| ! | TTTTTCTCTCAGAACTCCTG+TGG | + | chr6_1:16867634-16867653 | None:intergenic | 40.0% |
| TCTGTAAGTTTCAACGCTCA+TGG | + | chr6_1:16867671-16867690 | None:intergenic | 40.0% | |
| ! | TTTTAGACCATCCACAATGG+TGG | - | chr6_1:16867875-16867894 | Msa0877450:intron | 40.0% |
| TTTAGACCATCCACAATGGT+GGG | - | chr6_1:16867876-16867895 | Msa0877450:intron | 40.0% | |
| TATATGGGTGCCTATAGAGA+AGG | - | chr6_1:16867952-16867971 | Msa0877450:intron | 40.0% | |
| ATATGGGTGCCTATAGAGAA+GGG | - | chr6_1:16867953-16867972 | Msa0877450:intron | 40.0% | |
| TTACCGTACAGTAAGTGATG+TGG | - | chr6_1:16868145-16868164 | Msa0877450:intron | 40.0% | |
| TGTCCACATCACTTACTGTA+CGG | + | chr6_1:16868151-16868170 | None:intergenic | 40.0% | |
| ! | CACAATAGAGCACCTTAATC+TGG | + | chr6_1:16868194-16868213 | None:intergenic | 40.0% |
| ! | CAGATTAAGGTGCTCTATTG+TGG | - | chr6_1:16868192-16868211 | Msa0877450:intron | 40.0% |
| ! | TTAAGGTGCTCTATTGTGGA+TGG | - | chr6_1:16868196-16868215 | Msa0877450:intron | 40.0% |
| !! | CTAATTGAGTTGGGCATCTT+TGG | - | chr6_1:16868405-16868424 | Msa0877450:intron | 40.0% |
| ! | CAAACGTCTTCAACCTTTTC+AGG | + | chr6_1:16868497-16868516 | None:intergenic | 40.0% |
| CTGAAAAGGTTGAAGACGTT+TGG | - | chr6_1:16868495-16868514 | Msa0877450:CDS | 40.0% | |
| ! | AAGACGTTTGGAACCTTAGA+GGG | - | chr6_1:16868507-16868526 | Msa0877450:CDS | 40.0% |
| CGAATAAGCCTTAGAGCTAA+AGG | - | chr6_1:16868684-16868703 | Msa0877450:CDS | 40.0% | |
| CAACCTCCAAAAACAATGCC+AGG | - | chr6_1:16861106-16861125 | Msa0877450:three_prime_UTR | 45.0% | |
| !! | TCTGATGGTGCTGTTAATCC+TGG | + | chr6_1:16861127-16861146 | None:intergenic | 45.0% |
| !!! | CGTTTTGGTTCTGCGTTGAA+AGG | + | chr6_1:16861295-16861314 | None:intergenic | 45.0% |
| !!! | GCAATAAGCGCTGAACGTTT+TGG | + | chr6_1:16861310-16861329 | None:intergenic | 45.0% |
| GTCTTGTGGGACATTCCAAA+CGG | - | chr6_1:16862394-16862413 | Msa0877450:intron | 45.0% | |
| TTGTTCATTCAGGAGAGGGA+GGG | - | chr6_1:16862816-16862835 | Msa0877450:intron | 45.0% | |
| AATTGTGGAGAGTCCTGCAA+TGG | - | chr6_1:16862883-16862902 | Msa0877450:intron | 45.0% | |
| !! | CTTTCAAGCCGATTTTGTGG+GGG | - | chr6_1:16863028-16863047 | Msa0877450:CDS | 45.0% |
| CAGATGATTGGTAGGGATTG+TGG | - | chr6_1:16863158-16863177 | Msa0877450:CDS | 45.0% | |
| ! | GGATTGTGGTGTCAACATGT+TGG | - | chr6_1:16863172-16863191 | Msa0877450:CDS | 45.0% |
| CGGGATAAATTAGGGATGTC+TGG | - | chr6_1:16863375-16863394 | Msa0877450:intron | 45.0% | |
| GAGAACACATACCTGCATTG+TGG | + | chr6_1:16863749-16863768 | None:intergenic | 45.0% | |
| AACAAATTGTGTCAGTGCGC+AGG | - | chr6_1:16863855-16863874 | Msa0877450:intron | 45.0% | |
| ACAAATTGTGTCAGTGCGCA+GGG | - | chr6_1:16863856-16863875 | Msa0877450:intron | 45.0% | |
| AGCAAGACAAGGACAGTGAA+AGG | - | chr6_1:16863897-16863916 | Msa0877450:intron | 45.0% | |
| GCAAGACAAGGACAGTGAAA+GGG | - | chr6_1:16863898-16863917 | Msa0877450:intron | 45.0% | |
| CAAGACAAGGACAGTGAAAG+GGG | - | chr6_1:16863899-16863918 | Msa0877450:intron | 45.0% | |
| ! | GGATGGGATGTTTCTGCTAT+TGG | - | chr6_1:16863924-16863943 | Msa0877450:intron | 45.0% |
| ATATCCAGTAGTGCATGCAG+TGG | - | chr6_1:16863982-16864001 | Msa0877450:intron | 45.0% | |
| ! | TTTTCCACTGCATGCACTAC+TGG | + | chr6_1:16863989-16864008 | None:intergenic | 45.0% |
| CCCTTTACTTCCCTATTTCG+AGG | + | chr6_1:16864056-16864075 | None:intergenic | 45.0% | |
| AACCTATCCTGGAGAGCTTA+TGG | - | chr6_1:16864417-16864436 | Msa0877450:intron | 45.0% | |
| TTCCATAAGCTCTCCAGGAT+AGG | + | chr6_1:16864422-16864441 | None:intergenic | 45.0% | |
| CCCTCGAGTGCTTATGATAT+AGG | - | chr6_1:16864500-16864519 | Msa0877450:intron | 45.0% | |
| TAGGATTCATGCCACACTGA+TGG | - | chr6_1:16865037-16865056 | Msa0877450:intron | 45.0% | |
| CCAGGAACAACAACACGTAA+TGG | + | chr6_1:16865498-16865517 | None:intergenic | 45.0% | |
| ! | CCATTACGTGTTGTTGTTCC+TGG | - | chr6_1:16865495-16865514 | Msa0877450:intron | 45.0% |
| !! | GTTGTTGTTCCTGGTGTCAT+TGG | - | chr6_1:16865504-16865523 | Msa0877450:intron | 45.0% |
| TTGGAGCTCGGTCTGTTAAA+TGG | - | chr6_1:16865523-16865542 | Msa0877450:intron | 45.0% | |
| TGTTCCCACCATCAGTGAAT+TGG | - | chr6_1:16865698-16865717 | Msa0877450:intron | 45.0% | |
| GTTCCCACCATCAGTGAATT+GGG | - | chr6_1:16865699-16865718 | Msa0877450:intron | 45.0% | |
| TGTCCCAATTCACTGATGGT+GGG | + | chr6_1:16865705-16865724 | None:intergenic | 45.0% | |
| TTGTCCCAATTCACTGATGG+TGG | + | chr6_1:16865706-16865725 | None:intergenic | 45.0% | |
| CCTGAACAGGGAAATCCATT+TGG | + | chr6_1:16865753-16865772 | None:intergenic | 45.0% | |
| ! | CCAAATGGATTTCCCTGTTC+AGG | - | chr6_1:16865750-16865769 | Msa0877450:intron | 45.0% |
| CATATAACACACTGCCCACA+AGG | + | chr6_1:16865935-16865954 | None:intergenic | 45.0% | |
| CAAGCAAGACTACCGTACAT+AGG | - | chr6_1:16866301-16866320 | Msa0877450:intron | 45.0% | |
| GAGACTGTTTGGAGAGCTTA+TGG | + | chr6_1:16866491-16866510 | None:intergenic | 45.0% | |
| AGGCTCTCATTCTGCTCATT+TGG | - | chr6_1:16866557-16866576 | Msa0877450:intron | 45.0% | |
| ! | GTAGATGTGTCTGTTGATGG+AGG | - | chr6_1:16866670-16866689 | Msa0877450:intron | 45.0% |
| ! | CTGTTGATGGAGGCAAAACA+TGG | - | chr6_1:16866680-16866699 | Msa0877450:intron | 45.0% |
| TGATGGAGGCAAAACATGGA+TGG | - | chr6_1:16866684-16866703 | Msa0877450:intron | 45.0% | |
| !!! | GCCCCTTTTTTGAGATCTTG+AGG | + | chr6_1:16866713-16866732 | None:intergenic | 45.0% |
| AAATGCAGCCGCAATTGTAG+TGG | - | chr6_1:16867073-16867092 | Msa0877450:intron | 45.0% | |
| ! | AGGCATTGCCACTACAATTG+CGG | + | chr6_1:16867084-16867103 | None:intergenic | 45.0% |
| ! | GCACTGACACGCTATATTGA+AGG | - | chr6_1:16867267-16867286 | Msa0877450:intron | 45.0% |
| ! | CGCTATATTGAAGGTGTGTC+CGG | - | chr6_1:16867276-16867295 | Msa0877450:intron | 45.0% |
| ! | TATATTGAAGGTGTGTCCGG+TGG | - | chr6_1:16867279-16867298 | Msa0877450:intron | 45.0% |
| TCGTGTTTGCGTTTGTGTCA+GGG | - | chr6_1:16867423-16867442 | Msa0877450:CDS | 45.0% | |
| !! | ATGGGGGTGCCTATTCAATA+TGG | + | chr6_1:16867920-16867939 | None:intergenic | 45.0% |
| !!! | TTTCTTTTGAGGCGCTAGGT+TGG | - | chr6_1:16868099-16868118 | Msa0877450:intron | 45.0% |
| GATGCCCAACTCAATTAGAG+TGG | + | chr6_1:16868403-16868422 | None:intergenic | 45.0% | |
| ! | GAAGACGTTTGGAACCTTAG+AGG | - | chr6_1:16868506-16868525 | Msa0877450:CDS | 45.0% |
| AAGCCTTAGAGCTAAAGGGA+AGG | - | chr6_1:16868689-16868708 | Msa0877450:CDS | 45.0% | |
| AGCCTTAGAGCTAAAGGGAA+GGG | - | chr6_1:16868690-16868709 | Msa0877450:CDS | 45.0% | |
| !! | TTTATTAAAATTCATTAAAT+GGG | + | chr6_1:16868020-16868039 | None:intergenic | 5.0% |
| !!! | TTTTATTAAAATTCATTAAA+TGG | + | chr6_1:16868021-16868040 | None:intergenic | 5.0% |
| AGGATGACGTGGTGGTTCTT+TGG | + | chr6_1:16861155-16861174 | None:intergenic | 50.0% | |
| TGAAGAGAAGGATGACGTGG+TGG | + | chr6_1:16861163-16861182 | None:intergenic | 50.0% | |
| GTAAGCTCGTGAGAAAGCGA+TGG | - | chr6_1:16862062-16862081 | Msa0877450:intron | 50.0% | |
| GTTGTTCATTCAGGAGAGGG+AGG | - | chr6_1:16862815-16862834 | Msa0877450:intron | 50.0% | |
| CTCACTCACCCCCACAAAAT+CGG | + | chr6_1:16863039-16863058 | None:intergenic | 50.0% | |
| TTTGTGGGGGTGAGTGAGTT+AGG | - | chr6_1:16863041-16863060 | Msa0877450:CDS | 50.0% | |
| GGACTGCTATGAGCAAGACA+AGG | - | chr6_1:16863886-16863905 | Msa0877450:CDS | 50.0% | |
| ACAAGGACAGTGAAAGGGGT+TGG | - | chr6_1:16863903-16863922 | Msa0877450:intron | 50.0% | |
| GACAGTGAAAGGGGTTGGAT+GGG | - | chr6_1:16863908-16863927 | Msa0877450:intron | 50.0% | |
| TAAGCACTCGAGGGACTGTT+TGG | + | chr6_1:16864494-16864513 | None:intergenic | 50.0% | |
| ! | TGTTTGGGGTGGTGCCAAAT+TGG | - | chr6_1:16864618-16864637 | Msa0877450:intron | 50.0% |
| GGCTTCAATACCACTCAGTC+AGG | - | chr6_1:16864856-16864875 | Msa0877450:intron | 50.0% | |
| CAGTGTGGCATGAATCCTAG+AGG | + | chr6_1:16865036-16865055 | None:intergenic | 50.0% | |
| ACACTGAGAAGCCATCAGTG+TGG | + | chr6_1:16865051-16865070 | None:intergenic | 50.0% | |
| TGGCTTCTCAGTGTCATCGT+AGG | - | chr6_1:16865057-16865076 | Msa0877450:intron | 50.0% | |
| AGCCTTTGCTTCAGCGTTAC+AGG | - | chr6_1:16865347-16865366 | Msa0877450:intron | 50.0% | |
| GCCTTTGCTTCAGCGTTACA+GGG | - | chr6_1:16865348-16865367 | Msa0877450:intron | 50.0% | |
| CCTTTGCTTCAGCGTTACAG+GGG | - | chr6_1:16865349-16865368 | Msa0877450:intron | 50.0% | |
| !! | TTCCTGGTGTCATTGGAGCT+CGG | - | chr6_1:16865511-16865530 | Msa0877450:intron | 50.0% |
| AGCTCGGTCTGTTAAATGGC+TGG | - | chr6_1:16865527-16865546 | Msa0877450:intron | 50.0% | |
| ! | GAAATCCATTTGGGGTCTCC+TGG | + | chr6_1:16865743-16865762 | None:intergenic | 50.0% |
| ACGTGAGCACAGTTAAGCCT+GGG | - | chr6_1:16865966-16865985 | Msa0877450:CDS | 50.0% | |
| ATGCTGCCAACAGCGACAAA+TGG | - | chr6_1:16866749-16866768 | Msa0877450:intron | 50.0% | |
| TGCTGCCAACAGCGACAAAT+GGG | - | chr6_1:16866750-16866769 | Msa0877450:intron | 50.0% | |
| ! | CAACAGCGACAAATGGGCTT+GGG | - | chr6_1:16866756-16866775 | Msa0877450:intron | 50.0% |
| !! | GCTTTTAGAGGGCTCTGCAA+AGG | + | chr6_1:16867104-16867123 | None:intergenic | 50.0% |
| TGGCCAACACGTGTAAGTGT+CGG | - | chr6_1:16867299-16867318 | Msa0877450:intron | 50.0% | |
| TGTCCGACACTTACACGTGT+TGG | + | chr6_1:16867305-16867324 | None:intergenic | 50.0% | |
| CTCGTGTTTGCGTTTGTGTC+AGG | - | chr6_1:16867422-16867441 | Msa0877450:CDS | 50.0% | |
| ! | AGATGAAGCACCCACCATTG+TGG | + | chr6_1:16867889-16867908 | None:intergenic | 50.0% |
| TTGAATAGGCACCCCCATTG+TGG | - | chr6_1:16867922-16867941 | Msa0877450:intron | 50.0% | |
| CCATAGCCACCCTTCTCTAT+AGG | + | chr6_1:16867965-16867984 | None:intergenic | 50.0% | |
| CCTATAGAGAAGGGTGGCTA+TGG | - | chr6_1:16867962-16867981 | Msa0877450:intron | 50.0% | |
| GCCTTAGAGCTAAAGGGAAG+GGG | - | chr6_1:16868691-16868710 | Msa0877450:CDS | 50.0% | |
| !! | ACCCCTTCCCTTTAGCTCTA+AGG | + | chr6_1:16868695-16868714 | None:intergenic | 50.0% |
| !! | AGGAGAGGGAGGGAGTGTTT+GGG | - | chr6_1:16862826-16862845 | Msa0877450:intron | 55.0% |
| GTGGAGAGTCCTGCAATGGA+CGG | - | chr6_1:16862887-16862906 | Msa0877450:intron | 55.0% | |
| TGGAGAGTCCTGCAATGGAC+GGG | - | chr6_1:16862888-16862907 | Msa0877450:intron | 55.0% | |
| GGTCATATCCCGTCCATTGC+AGG | + | chr6_1:16862899-16862918 | None:intergenic | 55.0% | |
| GCAATGGACGGGATATGACC+TGG | - | chr6_1:16862899-16862918 | Msa0877450:intron | 55.0% | |
| TGTGTCAGTGCGCAGGGAAT+CGG | - | chr6_1:16863862-16863881 | Msa0877450:intron | 55.0% | |
| GGACAGTGAAAGGGGTTGGA+TGG | - | chr6_1:16863907-16863926 | Msa0877450:intron | 55.0% | |
| GTTCTCTCAGCTGTTTGGGG+TGG | - | chr6_1:16864607-16864626 | Msa0877450:intron | 55.0% | |
| CCCCTGTAACGCTGAAGCAA+AGG | + | chr6_1:16865352-16865371 | None:intergenic | 55.0% | |
| GTCAACCAGGAGACCCCAAA+TGG | - | chr6_1:16865735-16865754 | Msa0877450:intron | 55.0% | |
| GACGTGAGCACAGTTAAGCC+TGG | - | chr6_1:16865965-16865984 | Msa0877450:CDS | 55.0% | |
| GAGCACAGTTAAGCCTGGGA+AGG | - | chr6_1:16865970-16865989 | Msa0877450:intron | 55.0% | |
| ATTAGCGGCTATGCCGCATC+AGG | - | chr6_1:16866625-16866644 | Msa0877450:intron | 55.0% | |
| CCAAGCCCATTTGTCGCTGT+TGG | + | chr6_1:16866758-16866777 | None:intergenic | 55.0% | |
| ! | CCAACAGCGACAAATGGGCT+TGG | - | chr6_1:16866755-16866774 | Msa0877450:intron | 55.0% |
| GCGGTACGCAGCTGTAATAG+CGG | + | chr6_1:16867139-16867158 | None:intergenic | 55.0% | |
| ! | CACTTACACGTGTTGGCCAC+CGG | + | chr6_1:16867298-16867317 | None:intergenic | 55.0% |
| ! | GAAGCACCCACCATTGTGGA+TGG | + | chr6_1:16867885-16867904 | None:intergenic | 55.0% |
| TGGGTGCCTATAGAGAAGGG+TGG | - | chr6_1:16867956-16867975 | Msa0877450:intron | 55.0% | |
| !! | CAGGAGAGGGAGGGAGTGTT+TGG | - | chr6_1:16862825-16862844 | Msa0877450:intron | 60.0% |
| GGGTTTGCAGCCTGACTGAG+TGG | + | chr6_1:16864869-16864888 | None:intergenic | 60.0% | |
| GACCGAGCTCCAATGACACC+AGG | + | chr6_1:16865516-16865535 | None:intergenic | 60.0% | |
| GTCAGTGCGCAGGGAATCGG+AGG | - | chr6_1:16863865-16863884 | Msa0877450:intron | 65.0% | |
| AGCGGCTATGCCGCATCAGG+TGG | - | chr6_1:16866628-16866647 | Msa0877450:intron | 65.0% | |
| GGCTATGCCGCATCAGGTGG+TGG | - | chr6_1:16866631-16866650 | Msa0877450:intron | 65.0% | |
| GCCTCTGCCACCACCTGATG+CGG | + | chr6_1:16866641-16866660 | None:intergenic | 65.0% | |
| ! | GCCGCATCAGGTGGTGGCAG+AGG | - | chr6_1:16866637-16866656 | Msa0877450:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 16861043 | 16868815 | 16861043 | ID=Msa0877450;Name=Msa0877450 |
| chr6_1 | mRNA | 16861043 | 16868815 | 16861043 | ID=Msa0877450-mRNA-1;Parent=Msa0877450;Name=Msa0877450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=78|1|1|1|0.91|0.84|13|204|393 |
| chr6_1 | exon | 16861043 | 16861241 | 16861043 | ID=Msa0877450-mRNA-1:exon:4716;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16861267 | 16861388 | 16861267 | ID=Msa0877450-mRNA-1:exon:4715;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16863024 | 16863239 | 16863024 | ID=Msa0877450-mRNA-1:exon:4714;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16863867 | 16863914 | 16863867 | ID=Msa0877450-mRNA-1:exon:4713;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16864087 | 16864188 | 16864087 | ID=Msa0877450-mRNA-1:exon:4712;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16864277 | 16864387 | 16864277 | ID=Msa0877450-mRNA-1:exon:4711;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16864930 | 16865025 | 16864930 | ID=Msa0877450-mRNA-1:exon:4710;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16865123 | 16865241 | 16865123 | ID=Msa0877450-mRNA-1:exon:4709;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16865907 | 16865988 | 16865907 | ID=Msa0877450-mRNA-1:exon:4708;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16866102 | 16866138 | 16866102 | ID=Msa0877450-mRNA-1:exon:4707;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16867422 | 16867484 | 16867422 | ID=Msa0877450-mRNA-1:exon:4706;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16868454 | 16868569 | 16868454 | ID=Msa0877450-mRNA-1:exon:4705;Parent=Msa0877450-mRNA-1 |
| chr6_1 | exon | 16868663 | 16868815 | 16868663 | ID=Msa0877450-mRNA-1:exon:4704;Parent=Msa0877450-mRNA-1 |
| chr6_1 | five_prime_UTR | 16868738 | 16868815 | 16868738 | ID=Msa0877450-mRNA-1:five_prime_utr;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16868663 | 16868737 | 16868663 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16868454 | 16868569 | 16868454 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16867422 | 16867484 | 16867422 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16866102 | 16866138 | 16866102 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16865907 | 16865988 | 16865907 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16865123 | 16865241 | 16865123 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16864930 | 16865025 | 16864930 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16864277 | 16864387 | 16864277 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16864087 | 16864188 | 16864087 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16863867 | 16863914 | 16863867 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16863024 | 16863239 | 16863024 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | CDS | 16861272 | 16861388 | 16861272 | ID=Msa0877450-mRNA-1:cds;Parent=Msa0877450-mRNA-1 |
| chr6_1 | three_prime_UTR | 16861267 | 16861271 | 16861267 | ID=Msa0877450-mRNA-1:three_prime_utr;Parent=Msa0877450-mRNA-1 |
| chr6_1 | three_prime_UTR | 16861043 | 16861241 | 16861043 | ID=Msa0877450-mRNA-1:three_prime_utr;Parent=Msa0877450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
