Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980150 | XP_003618920.2 | 90.763 | 498 | 10 | 1 | 1 | 498 | 260 | 721 | 0.0 | 922 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980150 | sp|Q8GUP1|CTF77_ARATH | 60.038 | 528 | 128 | 10 | 1 | 498 | 260 | 734 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980150 | G7KP74 | 90.763 | 498 | 10 | 1 | 1 | 498 | 260 | 721 | 0.0 | 922 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0373930 | Msa0980150 | 0.802560 | 5.293907e-49 | -8.615850e-47 |
| Msa0553460 | Msa0980150 | 0.802620 | 5.144694e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980150 | MtrunA17_Chr6g0460371 | 90.763 | 498 | 10 | 1 | 1 | 498 | 260 | 721 | 0.0 | 922 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980150 | AT1G17760.1 | 60.038 | 528 | 128 | 10 | 1 | 498 | 260 | 734 | 0.0 | 603 |
Find 105 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTCTGCTCTCAATATC+TGG | 0.138050 | 6_4:+18113935 | Msa0980150:CDS |
| CACTTCCTCAAGACGCTTTC+CGG | 0.191888 | 6_4:+18118245 | Msa0980150:CDS |
| TCATATGGAAGTGCACTTTC+TGG | 0.218263 | 6_4:+18118322 | Msa0980150:CDS |
| GAAAATATACGAAAACCTTT+TGG | 0.265371 | 6_4:+18114241 | Msa0980150:CDS |
| CCTGCTACAAGTGAACTTTC+TGG | 0.280289 | 6_4:+18117579 | Msa0980150:CDS |
| GGAATCCCGTGGAGCAATTC+AGG | 0.310644 | 6_4:+18113677 | Msa0980150:CDS |
| AGCTGCTAGGAAGTACTTTC+TGG | 0.311993 | 6_4:+18114614 | Msa0980150:CDS |
| GAGAAGTCTATTATGCTTAA+TGG | 0.319079 | 6_4:+18116402 | Msa0980150:CDS |
| AAGAGAAAGTTGTTATTTGT+AGG | 0.319507 | 6_4:-18118545 | None:intergenic |
| ATCAACATCTTTGAAGTATC+AGG | 0.324206 | 6_4:-18116562 | None:intergenic |
| TACAAACTGGTACCTCTTGC+CGG | 0.334966 | 6_4:-18116216 | None:intergenic |
| GATATAGTTTCATGGATCTA+TGG | 0.361978 | 6_4:+18116161 | Msa0980150:CDS |
| GTTAAATTTGAGCAAACTTA+CGG | 0.366702 | 6_4:+18115650 | Msa0980150:CDS |
| TACATACCTGGATTATGCTT+TGG | 0.368172 | 6_4:-18116592 | None:intergenic |
| TGAGATAAGCCACTTTGAAC+AGG | 0.369484 | 6_4:-18117618 | None:intergenic |
| AACTCACTCAAGAATATAAA+CGG | 0.372963 | 6_4:-18114928 | None:intergenic |
| CAAACAGGATCAGTTTCATA+TGG | 0.389990 | 6_4:+18118307 | Msa0980150:CDS |
| TTAAATTTGAGCAAACTTAC+GGG | 0.392761 | 6_4:+18115651 | Msa0980150:CDS |
| TGTATCACGATATAGTTTCA+TGG | 0.404007 | 6_4:+18116153 | Msa0980150:CDS |
| GTTCTGCCATCTGTTGAGGC+AGG | 0.404429 | 6_4:+18113958 | Msa0980150:CDS |
| CATACCATACATCAGGATAA+TGG | 0.423357 | 6_4:-18113346 | None:intergenic |
| CTTTCTGGAACTGTCGTATC+CGG | 0.425032 | 6_4:-18118264 | None:intergenic |
| TGCTTCTGCTCTCAATATCT+GGG | 0.426490 | 6_4:+18113936 | Msa0980150:CDS |
| GCCGGTAGCACTTCACAAAC+AGG | 0.429592 | 6_4:+18118292 | Msa0980150:CDS |
| TGTACCATTATCCTGATGTA+TGG | 0.438544 | 6_4:+18113342 | Msa0980150:CDS |
| GCAAACCTACCTTCAGTTGA+CGG | 0.442220 | 6_4:+18117088 | Msa0980150:CDS |
| TTCACTTGTAGGTTTGGAAA+AGG | 0.443294 | 6_4:+18115624 | Msa0980150:intron |
| TTTCCCGTATTGCTTTCTAC+CGG | 0.444340 | 6_4:-18117649 | None:intergenic |
| GCACTTTCTGGCGATTTATC+CGG | 0.444481 | 6_4:+18118334 | Msa0980150:CDS |
| ACGGGACAAAGTGGTAAAAC+TGG | 0.444839 | 6_4:+18117525 | Msa0980150:CDS |
| ATTTAGTATCATCTTCCTCT+TGG | 0.448088 | 6_4:-18118207 | None:intergenic |
| CATTGTCACTGTCTCCCAAA+AGG | 0.449879 | 6_4:-18114256 | None:intergenic |
| AGGTCTCTGAAGGCTCTTCC+TGG | 0.450859 | 6_4:+18113428 | Msa0980150:CDS |
| GGCGATTTATCCGGCAGCAC+TGG | 0.454825 | 6_4:+18118343 | Msa0980150:CDS |
| GATAGCACAATATCCACATT+TGG | 0.455138 | 6_4:-18117477 | None:intergenic |
| GGGATCTTTGTCAAGACAAA+AGG | 0.458139 | 6_4:-18114694 | None:intergenic |
| GGATCTTGCTAGCATGCTTA+AGG | 0.460298 | 6_4:+18115673 | Msa0980150:CDS |
| TACAATACTACATCATAGAT+TGG | 0.460666 | 6_4:-18118486 | None:intergenic |
| TTCGCAGGGACAGGTGCTGC+TGG | 0.466805 | 6_4:+18117007 | Msa0980150:intron |
| TTCCCGTATTGCTTTCTACC+GGG | 0.479448 | 6_4:-18117648 | None:intergenic |
| CGGAAAGCGTCTTGAGGAAG+TGG | 0.482528 | 6_4:-18118244 | None:intergenic |
| TCCTGTTTGTGAAGTGCTAC+CGG | 0.483944 | 6_4:-18118293 | None:intergenic |
| ACATGTAGGTTGAGCAAAGA+AGG | 0.487018 | 6_4:+18116074 | Msa0980150:intron |
| AGTTCACTTGTAGCAGGAGC+AGG | 0.487025 | 6_4:-18117573 | None:intergenic |
| TTCTGCCATCTGTTGAGGCA+GGG | 0.493188 | 6_4:+18113959 | Msa0980150:CDS |
| GTAGCAGGAGCAGGACCTAC+TGG | 0.493749 | 6_4:-18117564 | None:intergenic |
| GTAGAAAGCAATACGGGAAA+AGG | 0.494955 | 6_4:+18117652 | Msa0980150:CDS |
| GCATAATCATACCATACATC+AGG | 0.502464 | 6_4:-18113353 | None:intergenic |
| ACTCACTCAAGAATATAAAC+GGG | 0.506129 | 6_4:-18114927 | None:intergenic |
| TTACAGAGCGACCTTCCAAC+GGG | 0.507023 | 6_4:+18117507 | Msa0980150:CDS |
| TATTTCAGCTACATCTTCAA+AGG | 0.507383 | 6_4:+18116531 | Msa0980150:CDS |
| GTTATATCAACCAGTGCTGC+CGG | 0.514917 | 6_4:-18118353 | None:intergenic |
| CAAAGAAGGAAAGAAGCGTT+TGG | 0.515620 | 6_4:+18116088 | Msa0980150:CDS |
| TACCACTTTGTCCCGTTGGA+AGG | 0.517821 | 6_4:-18117518 | None:intergenic |
| TAGACATGATATGTACAAGA+TGG | 0.519730 | 6_4:-18114651 | None:intergenic |
| TCCTCTAGAGGATTCAGTTG+AGG | 0.520038 | 6_4:+18115309 | Msa0980150:CDS |
| GCTACATGGCATGCTAAAGC+TGG | 0.525953 | 6_4:+18113374 | Msa0980150:CDS |
| AGACATGATATGTACAAGAT+GGG | 0.529356 | 6_4:-18114650 | None:intergenic |
| CTGGGTTCTGCCATCTGTTG+AGG | 0.531469 | 6_4:+18113954 | Msa0980150:CDS |
| TTGTCTTGACAAAGATCCCA+AGG | 0.534450 | 6_4:+18114698 | Msa0980150:CDS |
| ACAAACTGGTACCTCTTGCC+GGG | 0.540167 | 6_4:-18116215 | None:intergenic |
| CCAGAAAGTTCACTTGTAGC+AGG | 0.540677 | 6_4:-18117579 | None:intergenic |
| ATTGAGTTCACTTCCTCTAG+AGG | 0.546234 | 6_4:+18115297 | Msa0980150:CDS |
| TATGATCCAAAGCATAATCC+AGG | 0.559022 | 6_4:+18116586 | Msa0980150:CDS |
| TTAAACCCTGCCTCAACAGA+TGG | 0.560864 | 6_4:-18113964 | None:intergenic |
| AGGAGAAATTAAGCTTAGTG+AGG | 0.561121 | 6_4:-18118525 | None:intergenic |
| CAACCCGGTAGAAAGCAATA+CGG | 0.562816 | 6_4:+18117645 | Msa0980150:CDS |
| GGACCTACTGGCAATTGTGA+TGG | 0.562936 | 6_4:-18117552 | None:intergenic |
| ACAATATCCACATTTGGTGT+TGG | 0.568076 | 6_4:-18117471 | None:intergenic |
| AACCCGGTAGAAAGCAATAC+GGG | 0.568599 | 6_4:+18117646 | Msa0980150:CDS |
| TGCAGGTCCAACACCAAATG+TGG | 0.571426 | 6_4:+18117464 | Msa0980150:intron |
| AAGCGTCTTGAGGAAGTGGT+TGG | 0.574232 | 6_4:-18118240 | None:intergenic |
| TAATACCTGAATTGCTCCAC+GGG | 0.574460 | 6_4:-18113682 | None:intergenic |
| CTGCAATCAAAGTATTTCAA+AGG | 0.574741 | 6_4:+18113408 | Msa0980150:CDS |
| ATGATCTTGATAATTTATCC+CGG | 0.576425 | 6_4:+18116197 | Msa0980150:CDS |
| AGTATTTCAAAGGTCTCTGA+AGG | 0.578380 | 6_4:+18113418 | Msa0980150:CDS |
| TTAAATTATCTATAAGCTCG+AGG | 0.580110 | 6_4:-18118417 | None:intergenic |
| CTGAAGGTGTTGAAGCTGCT+AGG | 0.582458 | 6_4:+18114601 | Msa0980150:CDS |
| ATTATCTATAAGCTCGAGGA+AGG | 0.583494 | 6_4:-18118413 | None:intergenic |
| CGTATCCGGAAAGCGTCTTG+AGG | 0.583811 | 6_4:-18118250 | None:intergenic |
| CTATGTGGCTTACGCGTCAG+TGG | 0.587294 | 6_4:+18114671 | Msa0980150:CDS |
| GGCTTATCTCACAAGCAACC+CGG | 0.588513 | 6_4:+18117630 | Msa0980150:CDS |
| TTTACAGAGCGACCTTCCAA+CGG | 0.590971 | 6_4:+18117506 | Msa0980150:CDS |
| TATACGTGCTTTATTCGAGA+GGG | 0.597091 | 6_4:+18115273 | Msa0980150:CDS |
| TGATAATTTATCCCGGCAAG+AGG | 0.598970 | 6_4:+18116204 | Msa0980150:CDS |
| AATTACCGTCAACTGAAGGT+AGG | 0.599943 | 6_4:-18117093 | None:intergenic |
| GAGATAAGCCACTTTGAACA+GGG | 0.604566 | 6_4:-18117617 | None:intergenic |
| AAGTCTCACCCTGTTCAAAG+TGG | 0.606342 | 6_4:+18117609 | Msa0980150:CDS |
| GAAAGCTACACCACCTGCGT+TGG | 0.607941 | 6_4:+18117054 | Msa0980150:CDS |
| TTGTACATATCATGTCTATG+TGG | 0.608793 | 6_4:+18114656 | Msa0980150:CDS |
| GTAATACCTGAATTGCTCCA+CGG | 0.609238 | 6_4:-18113683 | None:intergenic |
| TGAAAATTACCGTCAACTGA+AGG | 0.609478 | 6_4:-18117097 | None:intergenic |
| CAGTTCCAGAAAGCTCGAGC+CGG | 0.612537 | 6_4:+18118274 | Msa0980150:CDS |
| TCAAGATCATTCGAAGTGCA+CGG | 0.617777 | 6_4:-18116184 | None:intergenic |
| ATATACGTGCTTTATTCGAG+AGG | 0.625732 | 6_4:+18115272 | Msa0980150:CDS |
| ATATGCTTATGCAGAGCTAG+AGG | 0.626295 | 6_4:+18113656 | Msa0980150:CDS |
| GACCTTCCAACGGGACAAAG+TGG | 0.627349 | 6_4:+18117516 | Msa0980150:CDS |
| TAAATTTGAGCAAACTTACG+GGG | 0.629800 | 6_4:+18115652 | Msa0980150:CDS |
| ATAATAATGTTCAGGCCAAG+AGG | 0.649307 | 6_4:+18118192 | Msa0980150:intron |
| GACATGATATGTACAAGATG+GGG | 0.653987 | 6_4:-18114649 | None:intergenic |
| GTAGCTGAAATACTTGCAGT+CGG | 0.657681 | 6_4:-18116520 | None:intergenic |
| ACCTCAACTGAATCCTCTAG+AGG | 0.658815 | 6_4:-18115310 | None:intergenic |
| ATTCCATCACAATTGCCAGT+AGG | 0.663778 | 6_4:+18117549 | Msa0980150:CDS |
| TATGGTATGATTATGCTACA+TGG | 0.677015 | 6_4:+18113360 | Msa0980150:CDS |
| GCAGAGCTAGAGGAATCCCG+TGG | 0.700291 | 6_4:+18113666 | Msa0980150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGAAATTTGAATATTTTT+TGG | + | chr6_4:18116625-18116644 | Msa0980150:intron | 10.0% |
| !! | ACTATAGTCATTTATATTAT+TGG | + | chr6_4:18113728-18113747 | Msa0980150:intron | 15.0% |
| !! | CTATAGTCATTTATATTATT+GGG | + | chr6_4:18113729-18113748 | Msa0980150:intron | 15.0% |
| !! | CAAGTAAAACATTTAAATTT+CGG | - | chr6_4:18114394-18114413 | None:intergenic | 15.0% |
| !!! | TAACAATAATTCTTTTTCAA+TGG | + | chr6_4:18115170-18115189 | Msa0980150:intron | 15.0% |
| !! | ACTGAATCTAAATAAAATAT+TGG | - | chr6_4:18115491-18115510 | None:intergenic | 15.0% |
| !!! | ATATTTTATTTAGATTCAGT+AGG | + | chr6_4:18115491-18115510 | Msa0980150:intron | 15.0% |
| !! | GATAAGATTAAGATATTATA+CGG | + | chr6_4:18115979-18115998 | Msa0980150:intron | 15.0% |
| !!! | TCTTTAAAAAATATACAAAC+TGG | - | chr6_4:18116232-18116251 | None:intergenic | 15.0% |
| !!! | TTAATTTTTACCTTTTTTAG+TGG | + | chr6_4:18116355-18116374 | Msa0980150:intron | 15.0% |
| !! | TTTATTAATCTGAACATAAA+AGG | - | chr6_4:18116718-18116737 | None:intergenic | 15.0% |
| !! | GATTCATATTTAATACATAT+TGG | - | chr6_4:18117237-18117256 | None:intergenic | 15.0% |
| !!! | TATTTGTTATAATAATGTTC+AGG | + | chr6_4:18118184-18118203 | Msa0980150:intron | 15.0% |
| !! | AAATAAAGGTAAAAAATGTG+AGG | - | chr6_4:18113591-18113610 | None:intergenic | 20.0% |
| !! | ATTTCATTTGTGAATAGATT+CGG | + | chr6_4:18113623-18113642 | Msa0980150:intron | 20.0% |
| !!! | GGATTTTTTAATGTATTATC+AGG | + | chr6_4:18113759-18113778 | Msa0980150:intron | 20.0% |
| !!! | TTTTTAGTATCAATGATACT+TGG | + | chr6_4:18113829-18113848 | Msa0980150:intron | 20.0% |
| !!! | TTTCTAGTTTCTTCTTAATT+TGG | + | chr6_4:18113893-18113912 | Msa0980150:intron | 20.0% |
| !!! | TTTTTAGGAATGTATATGTT+TGG | + | chr6_4:18114054-18114073 | Msa0980150:intron | 20.0% |
| !!! | ATTGGTTATTTTAATCCTTA+AGG | + | chr6_4:18114176-18114195 | Msa0980150:intron | 20.0% |
| !!! | AAAATATACGAAAACCTTTT+GGG | + | chr6_4:18114242-18114261 | Msa0980150:CDS | 20.0% |
| !! | TCTCAGAATGAATTAAAATA+TGG | + | chr6_4:18114764-18114783 | Msa0980150:intron | 20.0% |
| !! | CTCAGAATGAATTAAAATAT+GGG | + | chr6_4:18114765-18114784 | Msa0980150:intron | 20.0% |
| !! | TTAACGTCTAGAAAATAATT+CGG | + | chr6_4:18114843-18114862 | Msa0980150:intron | 20.0% |
| !! | ATAATACATTAAGAAAGCAA+GGG | - | chr6_4:18114987-18115006 | None:intergenic | 20.0% |
| !! | TTAATGTATTATGCCAATAT+TGG | + | chr6_4:18114995-18115014 | Msa0980150:intron | 20.0% |
| !! | GTATAAGATTTAAAAACTAG+AGG | - | chr6_4:18115079-18115098 | None:intergenic | 20.0% |
| !!! | TTTTTAACTTTACGTTTTGT+AGG | + | chr6_4:18115105-18115124 | Msa0980150:intron | 20.0% |
| !! | GAAAAAGAATTATTGTTAAG+AGG | - | chr6_4:18115168-18115187 | None:intergenic | 20.0% |
| !! | TCTCAATATTTCTTATTATG+TGG | + | chr6_4:18116466-18116485 | Msa0980150:intron | 20.0% |
| !! | CTCAATATTTCTTATTATGT+GGG | + | chr6_4:18116467-18116486 | Msa0980150:intron | 20.0% |
| !! | ATTCAAATTTCAAACAAGAT+GGG | - | chr6_4:18116619-18116638 | None:intergenic | 20.0% |
| !! | TATTCAAATTTCAAACAAGA+TGG | - | chr6_4:18116620-18116639 | None:intergenic | 20.0% |
| !! | ATATACTAACATATAGTTAC+TGG | - | chr6_4:18116762-18116781 | None:intergenic | 20.0% |
| !! | CATATTATACTTGCAATATT+TGG | - | chr6_4:18116924-18116943 | None:intergenic | 20.0% |
| !!! | AATTATTATCGGATACTTTT+TGG | + | chr6_4:18117348-18117367 | Msa0980150:intron | 20.0% |
| !! | AAAAATGGAAGACTATATAT+AGG | - | chr6_4:18117399-18117418 | None:intergenic | 20.0% |
| !! | AAATATCAATCACATGAAAA+TGG | - | chr6_4:18118169-18118188 | None:intergenic | 20.0% |
| !!! | TAGATCTTTTGATTTACATA+GGG | - | chr6_4:18118393-18118412 | None:intergenic | 20.0% |
| ! | GTTGTGAATAAAAACGATAT+AGG | - | chr6_4:18113496-18113515 | None:intergenic | 25.0% |
| ! | ATGACAGAGCAATTAAATAA+AGG | - | chr6_4:18113605-18113624 | None:intergenic | 25.0% |
| ! | TACCAAATGGATATATGAAA+TGG | + | chr6_4:18113703-18113722 | Msa0980150:intron | 25.0% |
| ! | TTCCATTTCATATATCCATT+TGG | - | chr6_4:18113708-18113727 | None:intergenic | 25.0% |
| ! | ATTTATATTATTGGGAGTTG+TGG | + | chr6_4:18113737-18113756 | Msa0980150:intron | 25.0% |
| ! | TTTATATTATTGGGAGTTGT+GGG | + | chr6_4:18113738-18113757 | Msa0980150:intron | 25.0% |
| ! | TTTCAACGAATTACTTAAGT+GGG | - | chr6_4:18113859-18113878 | None:intergenic | 25.0% |
| ! | GAAGAAACTAGAAAAGATTT+AGG | - | chr6_4:18113887-18113906 | None:intergenic | 25.0% |
| !!! | TTCTTAATTTGGTTTTAGAG+CGG | + | chr6_4:18113904-18113923 | Msa0980150:intron | 25.0% |
| !!! | TGGAAAAGTCTATCTTTTTT+AGG | + | chr6_4:18114039-18114058 | Msa0980150:intron | 25.0% |
| !!! | TGGAGGCATAATAATTTTTT+TGG | + | chr6_4:18114074-18114093 | Msa0980150:intron | 25.0% |
| !!! | TTTTTGGCTTAATCATACTT+TGG | + | chr6_4:18114090-18114109 | Msa0980150:intron | 25.0% |
| ! | AGATATCATATGACACATAT+GGG | - | chr6_4:18114131-18114150 | None:intergenic | 25.0% |
| ! | AAGATATCATATGACACATA+TGG | - | chr6_4:18114132-18114151 | None:intergenic | 25.0% |
| ! | TTAAAATAACCAATGAAGAC+AGG | - | chr6_4:18114170-18114189 | None:intergenic | 25.0% |
| !!! | TTGTTTTCTTGTTTTGTTTC+AGG | + | chr6_4:18114211-18114230 | Msa0980150:intron | 25.0% |
| !! | GAAAATATACGAAAACCTTT+TGG | + | chr6_4:18114241-18114260 | Msa0980150:CDS | 25.0% |
| ! | ACTTGTTCAAAACTCATTAA+TGG | + | chr6_4:18114409-18114428 | Msa0980150:intron | 25.0% |
| ! | TAAAGAAAAATAATGGCAGA+GGG | - | chr6_4:18114470-18114489 | None:intergenic | 25.0% |
| ! | TTAAAGAAAAATAATGGCAG+AGG | - | chr6_4:18114471-18114490 | None:intergenic | 25.0% |
| ! | CTCTCGTTAAAGAAAAATAA+TGG | - | chr6_4:18114477-18114496 | None:intergenic | 25.0% |
| ! | AGTAACAATATGCACAAAAA+AGG | - | chr6_4:18114735-18114754 | None:intergenic | 25.0% |
| ! | AACTCACTCAAGAATATAAA+CGG | - | chr6_4:18114931-18114950 | None:intergenic | 25.0% |
| ! | CATAATACATTAAGAAAGCA+AGG | - | chr6_4:18114988-18115007 | None:intergenic | 25.0% |
| ! | ATTTAAAAACTAGAGGAAAC+AGG | - | chr6_4:18115072-18115091 | None:intergenic | 25.0% |
| !!! | GAATATTTTTTGAAGGAACA+AGG | - | chr6_4:18115354-18115373 | None:intergenic | 25.0% |
| ! | TGTTCCTTCAAAAAATATTC+TGG | + | chr6_4:18115354-18115373 | Msa0980150:intron | 25.0% |
| !!! | GATTCCAGAATATTTTTTGA+AGG | - | chr6_4:18115361-18115380 | None:intergenic | 25.0% |
| ! | TCACATATTTGTTCTCAAAA+TGG | - | chr6_4:18115414-18115433 | None:intergenic | 25.0% |
| ! | AATTTATGTGCTTATTCAGT+TGG | + | chr6_4:18115553-18115572 | Msa0980150:intron | 25.0% |
| ! | GTTAAATTTGAGCAAACTTA+CGG | + | chr6_4:18115650-18115669 | Msa0980150:CDS | 25.0% |
| ! | TTAAATTTGAGCAAACTTAC+GGG | + | chr6_4:18115651-18115670 | Msa0980150:CDS | 25.0% |
| ! | TAAGGTAGTACTTTCTTATT+TGG | + | chr6_4:18115691-18115710 | Msa0980150:intron | 25.0% |
| ! | AAATCCTTGATGGAAAAAAT+TGG | + | chr6_4:18115821-18115840 | Msa0980150:intron | 25.0% |
| ! | AATCCTTGATGGAAAAAATT+GGG | + | chr6_4:18115822-18115841 | Msa0980150:intron | 25.0% |
| !! | ATGATCTTGATAATTTATCC+CGG | + | chr6_4:18116197-18116216 | Msa0980150:CDS | 25.0% |
| !!! | CTTAATGGATCAACTTTTAT+AGG | + | chr6_4:18116417-18116436 | Msa0980150:CDS | 25.0% |
| ! | ATTATCTTCATTCTTGAACT+TGG | + | chr6_4:18116441-18116460 | Msa0980150:intron | 25.0% |
| ! | CATATCTTCTATAGTGAATT+TGG | - | chr6_4:18116686-18116705 | None:intergenic | 25.0% |
| !! | ATATAGTTACTGGATTTTGA+AGG | - | chr6_4:18116752-18116771 | None:intergenic | 25.0% |
| !!! | GCTTTTTTCATGTATGTTTT+TGG | - | chr6_4:18116875-18116894 | None:intergenic | 25.0% |
| ! | TATATAAAAACTCCCCATAA+CGG | - | chr6_4:18116969-18116988 | None:intergenic | 25.0% |
| ! | AAATCAAAAAGAAAAGGCAA+AGG | - | chr6_4:18117735-18117754 | None:intergenic | 25.0% |
| !!! | TTGCCTTTTCTTTTTGATTT+TGG | + | chr6_4:18117735-18117754 | Msa0980150:intron | 25.0% |
| ! | CATAATTGACGTAAATTCAT+TGG | - | chr6_4:18118051-18118070 | None:intergenic | 25.0% |
| ! | TGTGAAAACATAAAGAAGAA+AGG | - | chr6_4:18118138-18118157 | None:intergenic | 25.0% |
| !!! | GTAGATCTTTTGATTTACAT+AGG | - | chr6_4:18118394-18118413 | None:intergenic | 25.0% |
| ! | TTAAATTATCTATAAGCTCG+AGG | - | chr6_4:18118420-18118439 | None:intergenic | 25.0% |
| ! | TACAATACTACATCATAGAT+TGG | - | chr6_4:18118489-18118508 | None:intergenic | 25.0% |
| !!! | AAGAGAAAGTTGTTATTTGT+AGG | - | chr6_4:18118548-18118567 | None:intergenic | 25.0% |
| TATGGTATGATTATGCTACA+TGG | + | chr6_4:18113360-18113379 | Msa0980150:CDS | 30.0% | |
| ! | CTGCAATCAAAGTATTTCAA+AGG | + | chr6_4:18113408-18113427 | Msa0980150:CDS | 30.0% |
| GTTTCAACGAATTACTTAAG+TGG | - | chr6_4:18113860-18113879 | None:intergenic | 30.0% | |
| AACTAGAAAAGATTTAGGAG+AGG | - | chr6_4:18113882-18113901 | None:intergenic | 30.0% | |
| !!! | TCTTAATTTGGTTTTAGAGC+GGG | + | chr6_4:18113905-18113924 | Msa0980150:intron | 30.0% |
| !! | TTAGATTTTAGAGACACAAC+TGG | - | chr6_4:18114006-18114025 | None:intergenic | 30.0% |
| AATCTAATCTAGTACCTTCA+TGG | + | chr6_4:18114019-18114038 | Msa0980150:intron | 30.0% | |
| ! | AAAGATAGACTTTTCCATGA+AGG | - | chr6_4:18114036-18114055 | None:intergenic | 30.0% |
| TTAGGAATGTATATGTTTGG+AGG | + | chr6_4:18114057-18114076 | Msa0980150:intron | 30.0% | |
| CATACTTTGGATCTAGTAAA+AGG | + | chr6_4:18114103-18114122 | Msa0980150:intron | 30.0% | |
| !!! | TTTTTTAGTCCTGTCTTCAT+TGG | + | chr6_4:18114158-18114177 | Msa0980150:intron | 30.0% |
| AGACATGATATGTACAAGAT+GGG | - | chr6_4:18114653-18114672 | None:intergenic | 30.0% | |
| TAGACATGATATGTACAAGA+TGG | - | chr6_4:18114654-18114673 | None:intergenic | 30.0% | |
| TTGTACATATCATGTCTATG+TGG | + | chr6_4:18114656-18114675 | Msa0980150:CDS | 30.0% | |
| AAAGGAAATAGTAAGACCTT+GGG | - | chr6_4:18114717-18114736 | None:intergenic | 30.0% | |
| AAAAGGAAATAGTAAGACCT+TGG | - | chr6_4:18114718-18114737 | None:intergenic | 30.0% | |
| !!! | TTGCTTGTTATTTTAAGCAC+TGG | + | chr6_4:18114811-18114830 | Msa0980150:intron | 30.0% |
| ACTCACTCAAGAATATAAAC+GGG | - | chr6_4:18114930-18114949 | None:intergenic | 30.0% | |
| AAACAGGATTAATCAGAGAT+GGG | - | chr6_4:18114963-18114982 | None:intergenic | 30.0% | |
| AAAACAGGATTAATCAGAGA+TGG | - | chr6_4:18114964-18114983 | None:intergenic | 30.0% | |
| AAAATAACGAAGTACATGCA+TGG | + | chr6_4:18115459-18115478 | Msa0980150:intron | 30.0% | |
| TTGCAACTAATTTCACTTGT+AGG | + | chr6_4:18115613-18115632 | Msa0980150:intron | 30.0% | |
| ACTAATTTCACTTGTAGGTT+TGG | + | chr6_4:18115618-18115637 | Msa0980150:intron | 30.0% | |
| TAAATTTGAGCAAACTTACG+GGG | + | chr6_4:18115652-18115671 | Msa0980150:CDS | 30.0% | |
| GTAATCACTGATCATATGAA+AGG | + | chr6_4:18115798-18115817 | Msa0980150:intron | 30.0% | |
| ATATGAAAGGAAATCCTTGA+TGG | + | chr6_4:18115811-18115830 | Msa0980150:intron | 30.0% | |
| !!! | TATCCCAATTTTTTCCATCA+AGG | - | chr6_4:18115828-18115847 | None:intergenic | 30.0% |
| TTTATCCATGTATCACATGT+AGG | + | chr6_4:18116060-18116079 | Msa0980150:intron | 30.0% | |
| TGTATCACGATATAGTTTCA+TGG | + | chr6_4:18116153-18116172 | Msa0980150:CDS | 30.0% | |
| GATATAGTTTCATGGATCTA+TGG | + | chr6_4:18116161-18116180 | Msa0980150:CDS | 30.0% | |
| !! | TTTTGAAAGCTTTAGCTGTT+AGG | + | chr6_4:18116290-18116309 | Msa0980150:intron | 30.0% |
| ! | TTTTGACAAGCCACTAAAAA+AGG | - | chr6_4:18116368-18116387 | None:intergenic | 30.0% |
| TGTCAAAAATACGAAGAAAG+TGG | + | chr6_4:18116380-18116399 | Msa0980150:CDS | 30.0% | |
| GAGAAGTCTATTATGCTTAA+TGG | + | chr6_4:18116402-18116421 | Msa0980150:CDS | 30.0% | |
| ATACACTATTGTTGCAGATA+AGG | + | chr6_4:18116495-18116514 | Msa0980150:intron | 30.0% | |
| TACACTATTGTTGCAGATAA+GGG | + | chr6_4:18116496-18116515 | Msa0980150:intron | 30.0% | |
| TATTTCAGCTACATCTTCAA+AGG | + | chr6_4:18116531-18116550 | Msa0980150:CDS | 30.0% | |
| !! | ATCAACATCTTTGAAGTATC+AGG | - | chr6_4:18116565-18116584 | None:intergenic | 30.0% |
| !! | CGTTCTTTTCGCTATTTTAT+AGG | + | chr6_4:18117158-18117177 | Msa0980150:intron | 30.0% |
| CTAAAGACACATTTCTCATA+TGG | - | chr6_4:18117264-18117283 | None:intergenic | 30.0% | |
| !!! | TCTTCCATTTTTGAAGTGTA+TGG | + | chr6_4:18117407-18117426 | Msa0980150:intron | 30.0% |
| GATACCATACACTTCAAAAA+TGG | - | chr6_4:18117414-18117433 | None:intergenic | 30.0% | |
| GGTCCAAAATCAAAAAGAAA+AGG | - | chr6_4:18117741-18117760 | None:intergenic | 30.0% | |
| !!! | TTTTTGATTTTGGACCTGTT+TGG | + | chr6_4:18117745-18117764 | Msa0980150:intron | 30.0% |
| ! | TCATTGGTTATTTGTACAAG+AGG | - | chr6_4:18118035-18118054 | None:intergenic | 30.0% |
| ATTTAGTATCATCTTCCTCT+TGG | - | chr6_4:18118210-18118229 | None:intergenic | 30.0% | |
| TGTACCATTATCCTGATGTA+TGG | + | chr6_4:18113342-18113361 | Msa0980150:CDS | 35.0% | |
| CATACCATACATCAGGATAA+TGG | - | chr6_4:18113349-18113368 | None:intergenic | 35.0% | |
| GCATAATCATACCATACATC+AGG | - | chr6_4:18113356-18113375 | None:intergenic | 35.0% | |
| AGTATTTCAAAGGTCTCTGA+AGG | + | chr6_4:18113418-18113437 | Msa0980150:CDS | 35.0% | |
| AGACAAGCTAATACAAGAGA+AGG | - | chr6_4:18113544-18113563 | None:intergenic | 35.0% | |
| GCAATTCAGGTATTACCAAA+TGG | + | chr6_4:18113690-18113709 | Msa0980150:intron | 35.0% | |
| CAACGAATAAGAACTCCTTA+AGG | - | chr6_4:18114194-18114213 | None:intergenic | 35.0% | |
| TCAGTAAATATACTGCTGCA+TGG | + | chr6_4:18114362-18114381 | Msa0980150:intron | 35.0% | |
| ! | CAGATGTCAAATCTTTTGCA+TGG | - | chr6_4:18114546-18114565 | None:intergenic | 35.0% |
| !! | CGTTTTCTAAGAAGAACTGA+AGG | + | chr6_4:18114585-18114604 | Msa0980150:CDS | 35.0% |
| GACATGATATGTACAAGATG+GGG | - | chr6_4:18114652-18114671 | None:intergenic | 35.0% | |
| CAAGCAAGAAACACAATAGT+AGG | - | chr6_4:18114798-18114817 | None:intergenic | 35.0% | |
| TTAAGAAAGCAAGGGAAAAC+AGG | - | chr6_4:18114979-18114998 | None:intergenic | 35.0% | |
| ! | AGAAAAGTATAACTTGTGCG+AGG | - | chr6_4:18115140-18115159 | None:intergenic | 35.0% |
| ! | ATATACGTGCTTTATTCGAG+AGG | + | chr6_4:18115272-18115291 | Msa0980150:CDS | 35.0% |
| ! | TATACGTGCTTTATTCGAGA+GGG | + | chr6_4:18115273-18115292 | Msa0980150:CDS | 35.0% |
| GAACAAGGAAATAAGAGTCA+AGG | - | chr6_4:18115339-18115358 | None:intergenic | 35.0% | |
| ! | TCTGGAATCTTAGTAGTACT+TGG | + | chr6_4:18115372-18115391 | Msa0980150:intron | 35.0% |
| TTAGTAGTACTTGGTTGACA+AGG | + | chr6_4:18115381-18115400 | Msa0980150:intron | 35.0% | |
| TTCACTTGTAGGTTTGGAAA+AGG | + | chr6_4:18115624-18115643 | Msa0980150:intron | 35.0% | |
| TCAGACGCAAAAGAAATAAC+CGG | - | chr6_4:18115744-18115763 | None:intergenic | 35.0% | |
| CCTAATCTATGCAAAACAGA+TGG | - | chr6_4:18115869-18115888 | None:intergenic | 35.0% | |
| ! | CCATCTGTTTTGCATAGATT+AGG | + | chr6_4:18115866-18115885 | Msa0980150:intron | 35.0% |
| TCAAAGCTTGGATTGATACA+TGG | - | chr6_4:18115903-18115922 | None:intergenic | 35.0% | |
| GAGATGATCTAAGTTACTCT+TGG | + | chr6_4:18115957-18115976 | Msa0980150:intron | 35.0% | |
| TATGATCCAAAGCATAATCC+AGG | + | chr6_4:18116586-18116605 | Msa0980150:CDS | 35.0% | |
| TACATACCTGGATTATGCTT+TGG | - | chr6_4:18116595-18116614 | None:intergenic | 35.0% | |
| TTGTTAACTTACCAATTCGC+AGG | + | chr6_4:18116992-18117011 | Msa0980150:intron | 35.0% | |
| TGTTAACTTACCAATTCGCA+GGG | + | chr6_4:18116993-18117012 | Msa0980150:intron | 35.0% | |
| TGAAAATTACCGTCAACTGA+AGG | - | chr6_4:18117100-18117119 | None:intergenic | 35.0% | |
| ! | AAGACGCATCTGAAAAGTAT+CGG | + | chr6_4:18117300-18117319 | Msa0980150:intron | 35.0% |
| ! | CAACCATGTTTGAAATTTGC+AGG | + | chr6_4:18117447-18117466 | Msa0980150:intron | 35.0% |
| !! | ACAATATCCACATTTGGTGT+TGG | - | chr6_4:18117474-18117493 | None:intergenic | 35.0% |
| GATAGCACAATATCCACATT+TGG | - | chr6_4:18117480-18117499 | None:intergenic | 35.0% | |
| AGCATGAAGTATAGTCGAAA+GGG | - | chr6_4:18117704-18117723 | None:intergenic | 35.0% | |
| AAGCATGAAGTATAGTCGAA+AGG | - | chr6_4:18117705-18117724 | None:intergenic | 35.0% | |
| AGATGTAAAGCAATCCAAAC+AGG | - | chr6_4:18117762-18117781 | None:intergenic | 35.0% | |
| CATACCAACTTGTAACAAAG+CGG | + | chr6_4:18117870-18117889 | Msa0980150:intron | 35.0% | |
| TTGAACATAATCACATGTGC+TGG | - | chr6_4:18117925-18117944 | None:intergenic | 35.0% | |
| ATAATAATGTTCAGGCCAAG+AGG | + | chr6_4:18118192-18118211 | Msa0980150:intron | 35.0% | |
| CAAACAGGATCAGTTTCATA+TGG | + | chr6_4:18118307-18118326 | Msa0980150:CDS | 35.0% | |
| ATTATCTATAAGCTCGAGGA+AGG | - | chr6_4:18118416-18118435 | None:intergenic | 35.0% | |
| AGGAGAAATTAAGCTTAGTG+AGG | - | chr6_4:18118528-18118547 | None:intergenic | 35.0% | |
| ATATGCTTATGCAGAGCTAG+AGG | + | chr6_4:18113656-18113675 | Msa0980150:CDS | 40.0% | |
| TAATACCTGAATTGCTCCAC+GGG | - | chr6_4:18113685-18113704 | None:intergenic | 40.0% | |
| GTAATACCTGAATTGCTCCA+CGG | - | chr6_4:18113686-18113705 | None:intergenic | 40.0% | |
| TTGCTTCTGCTCTCAATATC+TGG | + | chr6_4:18113935-18113954 | Msa0980150:CDS | 40.0% | |
| TGCTTCTGCTCTCAATATCT+GGG | + | chr6_4:18113936-18113955 | Msa0980150:CDS | 40.0% | |
| GGGATCTTTGTCAAGACAAA+AGG | - | chr6_4:18114697-18114716 | None:intergenic | 40.0% | |
| TTGTCTTGACAAAGATCCCA+AGG | + | chr6_4:18114698-18114717 | Msa0980150:CDS | 40.0% | |
| ATTCGGATTATCCATGCAGA+TGG | + | chr6_4:18114860-18114879 | Msa0980150:intron | 40.0% | |
| AACATTATGAGCCATCTGCA+TGG | - | chr6_4:18114874-18114893 | None:intergenic | 40.0% | |
| ! | GCTCATAATGTTTTCGAAGC+AGG | + | chr6_4:18114882-18114901 | Msa0980150:CDS | 40.0% |
| CTGTTTGCATGCTCCAATAT+TGG | - | chr6_4:18115011-18115030 | None:intergenic | 40.0% | |
| ACAGCTCCATTACATGCATT+CGG | + | chr6_4:18115027-18115046 | Msa0980150:intron | 40.0% | |
| ATTGAGTTCACTTCCTCTAG+AGG | + | chr6_4:18115297-18115316 | Msa0980150:CDS | 40.0% | |
| ! | AACTTTTACCTTGCTACGTC+CGG | + | chr6_4:18115722-18115741 | Msa0980150:intron | 40.0% |
| TTCATGCATTGCTCAAAGCT+TGG | - | chr6_4:18115915-18115934 | None:intergenic | 40.0% | |
| CTCAACCTACATGTGATACA+TGG | - | chr6_4:18116068-18116087 | None:intergenic | 40.0% | |
| ! | ACATGTAGGTTGAGCAAAGA+AGG | + | chr6_4:18116074-18116093 | Msa0980150:intron | 40.0% |
| !! | CAAAGAAGGAAAGAAGCGTT+TGG | + | chr6_4:18116088-18116107 | Msa0980150:CDS | 40.0% |
| TCAAGATCATTCGAAGTGCA+CGG | - | chr6_4:18116187-18116206 | None:intergenic | 40.0% | |
| TGATAATTTATCCCGGCAAG+AGG | + | chr6_4:18116204-18116223 | Msa0980150:CDS | 40.0% | |
| GTAGCTGAAATACTTGCAGT+CGG | - | chr6_4:18116523-18116542 | None:intergenic | 40.0% | |
| !! | AACAAGATGGGTTACATACC+TGG | - | chr6_4:18116607-18116626 | None:intergenic | 40.0% |
| ATAACGGCCACAAATGTACA+CGG | - | chr6_4:18116953-18116972 | None:intergenic | 40.0% | |
| TGTACATTTGTGGCCGTTAT+GGG | + | chr6_4:18116953-18116972 | Msa0980150:intron | 40.0% | |
| AATTACCGTCAACTGAAGGT+AGG | - | chr6_4:18117096-18117115 | None:intergenic | 40.0% | |
| GGACCTGCAAATTTCAAACA+TGG | - | chr6_4:18117453-18117472 | None:intergenic | 40.0% | |
| ATTCCATCACAATTGCCAGT+AGG | + | chr6_4:18117549-18117568 | Msa0980150:CDS | 40.0% | |
| ! | GAGATAAGCCACTTTGAACA+GGG | - | chr6_4:18117620-18117639 | None:intergenic | 40.0% |
| ! | TGAGATAAGCCACTTTGAAC+AGG | - | chr6_4:18117621-18117640 | None:intergenic | 40.0% |
| TTTCCCGTATTGCTTTCTAC+CGG | - | chr6_4:18117652-18117671 | None:intergenic | 40.0% | |
| GTAGAAAGCAATACGGGAAA+AGG | + | chr6_4:18117652-18117671 | Msa0980150:CDS | 40.0% | |
| ! | TCATATGGAAGTGCACTTTC+TGG | + | chr6_4:18118322-18118341 | Msa0980150:CDS | 40.0% |
| TTAAACCCTGCCTCAACAGA+TGG | - | chr6_4:18113967-18113986 | None:intergenic | 45.0% | |
| CATTGTCACTGTCTCCCAAA+AGG | - | chr6_4:18114259-18114278 | None:intergenic | 45.0% | |
| AAATATACTGCTGCATGGCG+TGG | + | chr6_4:18114367-18114386 | Msa0980150:intron | 45.0% | |
| !! | AGCTGCTAGGAAGTACTTTC+TGG | + | chr6_4:18114614-18114633 | Msa0980150:CDS | 45.0% |
| CAGCTCCATTACATGCATTC+GGG | + | chr6_4:18115028-18115047 | Msa0980150:intron | 45.0% | |
| AGCTCCATTACATGCATTCG+GGG | + | chr6_4:18115029-18115048 | Msa0980150:intron | 45.0% | |
| ! | TCCTCTAGAGGATTCAGTTG+AGG | + | chr6_4:18115309-18115328 | Msa0980150:CDS | 45.0% |
| ACCTCAACTGAATCCTCTAG+AGG | - | chr6_4:18115313-18115332 | None:intergenic | 45.0% | |
| CTAGAGGATTCAGTTGAGGT+TGG | + | chr6_4:18115313-18115332 | Msa0980150:intron | 45.0% | |
| GGATCTTGCTAGCATGCTTA+AGG | + | chr6_4:18115673-18115692 | Msa0980150:CDS | 45.0% | |
| AGAAATAACCGGACGTAGCA+AGG | - | chr6_4:18115733-18115752 | None:intergenic | 45.0% | |
| TTTGCGTCTGACTCTTAGTC+AGG | + | chr6_4:18115753-18115772 | Msa0980150:intron | 45.0% | |
| TCGAATAGACTGCACACAGA+TGG | + | chr6_4:18116017-18116036 | Msa0980150:intron | 45.0% | |
| TACAAACTGGTACCTCTTGC+CGG | - | chr6_4:18116219-18116238 | None:intergenic | 45.0% | |
| GTGTACATTTGTGGCCGTTA+TGG | + | chr6_4:18116952-18116971 | Msa0980150:intron | 45.0% | |
| GTACATTTGTGGCCGTTATG+GGG | + | chr6_4:18116954-18116973 | Msa0980150:intron | 45.0% | |
| GCAAACCTACCTTCAGTTGA+CGG | + | chr6_4:18117088-18117107 | Msa0980150:CDS | 45.0% | |
| TTTACAGAGCGACCTTCCAA+CGG | + | chr6_4:18117506-18117525 | Msa0980150:CDS | 45.0% | |
| ! | GTTTTACCACTTTGTCCCGT+TGG | - | chr6_4:18117525-18117544 | None:intergenic | 45.0% |
| ACGGGACAAAGTGGTAAAAC+TGG | + | chr6_4:18117525-18117544 | Msa0980150:CDS | 45.0% | |
| CCAGAAAGTTCACTTGTAGC+AGG | - | chr6_4:18117582-18117601 | None:intergenic | 45.0% | |
| CCTGCTACAAGTGAACTTTC+TGG | + | chr6_4:18117579-18117598 | Msa0980150:CDS | 45.0% | |
| AAGTCTCACCCTGTTCAAAG+TGG | + | chr6_4:18117609-18117628 | Msa0980150:CDS | 45.0% | |
| CAACCCGGTAGAAAGCAATA+CGG | + | chr6_4:18117645-18117664 | Msa0980150:CDS | 45.0% | |
| AACCCGGTAGAAAGCAATAC+GGG | + | chr6_4:18117646-18117665 | Msa0980150:CDS | 45.0% | |
| TTCCCGTATTGCTTTCTACC+GGG | - | chr6_4:18117651-18117670 | None:intergenic | 45.0% | |
| ATGTCCGTGTCAAACAGTGT+CGG | - | chr6_4:18117898-18117917 | None:intergenic | 45.0% | |
| !! | TTAGAAGCTATGAAGCACCG+CGG | - | chr6_4:18118003-18118022 | None:intergenic | 45.0% |
| !! | CTTTCTGGAACTGTCGTATC+CGG | - | chr6_4:18118267-18118286 | None:intergenic | 45.0% |
| ! | TCCTGTTTGTGAAGTGCTAC+CGG | - | chr6_4:18118296-18118315 | None:intergenic | 45.0% |
| ! | GCACTTTCTGGCGATTTATC+CGG | + | chr6_4:18118334-18118353 | Msa0980150:CDS | 45.0% |
| GTTATATCAACCAGTGCTGC+CGG | - | chr6_4:18118356-18118375 | None:intergenic | 45.0% | |
| !! | AAAATAGTTTAAATTATTAT+CGG | + | chr6_4:18117337-18117356 | Msa0980150:intron | 5.0% |
| GCTACATGGCATGCTAAAGC+TGG | + | chr6_4:18113374-18113393 | Msa0980150:CDS | 50.0% | |
| TGAAGGCTCTTCCTGGTAAG+TGG | + | chr6_4:18113435-18113454 | Msa0980150:intron | 50.0% | |
| !! | AAGCAGAAGTGCCACTTACC+AGG | - | chr6_4:18113449-18113468 | None:intergenic | 50.0% |
| TTCTGCCATCTGTTGAGGCA+GGG | + | chr6_4:18113959-18113978 | Msa0980150:CDS | 50.0% | |
| !! | CTGAAGGTGTTGAAGCTGCT+AGG | + | chr6_4:18114601-18114620 | Msa0980150:CDS | 50.0% |
| GCTCCATTACATGCATTCGG+GGG | + | chr6_4:18115030-18115049 | Msa0980150:intron | 50.0% | |
| CAACCCCCGAATGCATGTAA+TGG | - | chr6_4:18115036-18115055 | None:intergenic | 50.0% | |
| ATAGACTGCACACAGATGGC+TGG | + | chr6_4:18116021-18116040 | Msa0980150:intron | 50.0% | |
| ACAAACTGGTACCTCTTGCC+GGG | - | chr6_4:18116218-18116237 | None:intergenic | 50.0% | |
| GCGTGTTCCGTGTACATTTG+TGG | + | chr6_4:18116943-18116962 | Msa0980150:intron | 50.0% | |
| ACTTACCAATTCGCAGGGAC+AGG | + | chr6_4:18116998-18117017 | Msa0980150:intron | 50.0% | |
| AAAAATGCGACCAACGCAGG+TGG | - | chr6_4:18117067-18117086 | None:intergenic | 50.0% | |
| GCTAAAAATGCGACCAACGC+AGG | - | chr6_4:18117070-18117089 | None:intergenic | 50.0% | |
| TGCAGGTCCAACACCAAATG+TGG | + | chr6_4:18117464-18117483 | Msa0980150:intron | 50.0% | |
| TTACAGAGCGACCTTCCAAC+GGG | + | chr6_4:18117507-18117526 | Msa0980150:CDS | 50.0% | |
| TACCACTTTGTCCCGTTGGA+AGG | - | chr6_4:18117521-18117540 | None:intergenic | 50.0% | |
| GGACCTACTGGCAATTGTGA+TGG | - | chr6_4:18117555-18117574 | None:intergenic | 50.0% | |
| AGTTCACTTGTAGCAGGAGC+AGG | - | chr6_4:18117576-18117595 | None:intergenic | 50.0% | |
| GGCTTATCTCACAAGCAACC+CGG | + | chr6_4:18117630-18117649 | Msa0980150:CDS | 50.0% | |
| !! | GGTGCCGCTTTGTTACAAGT+TGG | - | chr6_4:18117877-18117896 | None:intergenic | 50.0% |
| AAGCGTCTTGAGGAAGTGGT+TGG | - | chr6_4:18118243-18118262 | None:intergenic | 50.0% | |
| CACTTCCTCAAGACGCTTTC+CGG | + | chr6_4:18118245-18118264 | Msa0980150:CDS | 50.0% | |
| ! | AGGTCTCTGAAGGCTCTTCC+TGG | + | chr6_4:18113428-18113447 | Msa0980150:CDS | 55.0% |
| GGAATCCCGTGGAGCAATTC+AGG | + | chr6_4:18113677-18113696 | Msa0980150:CDS | 55.0% | |
| CTGGGTTCTGCCATCTGTTG+AGG | + | chr6_4:18113954-18113973 | Msa0980150:CDS | 55.0% | |
| GTTCTGCCATCTGTTGAGGC+AGG | + | chr6_4:18113958-18113977 | Msa0980150:CDS | 55.0% | |
| CTATGTGGCTTACGCGTCAG+TGG | + | chr6_4:18114671-18114690 | Msa0980150:CDS | 55.0% | |
| GAAAGCTACACCACCTGCGT+TGG | + | chr6_4:18117054-18117073 | Msa0980150:CDS | 55.0% | |
| GACCTTCCAACGGGACAAAG+TGG | + | chr6_4:18117516-18117535 | Msa0980150:CDS | 55.0% | |
| !! | GGCACCGACACTGTTTGACA+CGG | + | chr6_4:18117891-18117910 | Msa0980150:intron | 55.0% |
| !! | CGGAAAGCGTCTTGAGGAAG+TGG | - | chr6_4:18118247-18118266 | None:intergenic | 55.0% |
| !! | CGTATCCGGAAAGCGTCTTG+AGG | - | chr6_4:18118253-18118272 | None:intergenic | 55.0% |
| CAGTTCCAGAAAGCTCGAGC+CGG | + | chr6_4:18118274-18118293 | Msa0980150:CDS | 55.0% | |
| GCCGGTAGCACTTCACAAAC+AGG | + | chr6_4:18118292-18118311 | Msa0980150:CDS | 55.0% | |
| GCAGAGCTAGAGGAATCCCG+TGG | + | chr6_4:18113666-18113685 | Msa0980150:CDS | 60.0% | |
| CAGCACCTGTCCCTGCGAAT+TGG | - | chr6_4:18117006-18117025 | None:intergenic | 60.0% | |
| GTAGCAGGAGCAGGACCTAC+TGG | - | chr6_4:18117567-18117586 | None:intergenic | 60.0% | |
| TCGTGTCAGAGTCGTGTCCG+CGG | + | chr6_4:18117983-18118002 | Msa0980150:intron | 60.0% | |
| !! | TGCTACCGGCTCGAGCTTTC+TGG | - | chr6_4:18118282-18118301 | None:intergenic | 60.0% |
| GGCGATTTATCCGGCAGCAC+TGG | + | chr6_4:18118343-18118362 | Msa0980150:CDS | 60.0% | |
| ! | TTCGCAGGGACAGGTGCTGC+TGG | + | chr6_4:18117007-18117026 | Msa0980150:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 18113335 | 18118569 | 18113335 | ID=Msa0980150;Name=Msa0980150 |
| chr6_4 | mRNA | 18113335 | 18118569 | 18113335 | ID=Msa0980150-mRNA-1;Parent=Msa0980150;Name=Msa0980150-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.76|0.85|0.92|1|1|14|200|498 |
| chr6_4 | exon | 18113335 | 18113449 | 18113335 | ID=Msa0980150-mRNA-1:exon:5574;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18113640 | 18113698 | 18113640 | ID=Msa0980150-mRNA-1:exon:5575;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18113922 | 18114029 | 18113922 | ID=Msa0980150-mRNA-1:exon:5576;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18114233 | 18114301 | 18114233 | ID=Msa0980150-mRNA-1:exon:5577;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18114579 | 18114719 | 18114579 | ID=Msa0980150-mRNA-1:exon:5578;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18114879 | 18114943 | 18114879 | ID=Msa0980150-mRNA-1:exon:5579;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18115234 | 18115330 | 18115234 | ID=Msa0980150-mRNA-1:exon:5580;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18115635 | 18115694 | 18115635 | ID=Msa0980150-mRNA-1:exon:5581;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18116082 | 18116225 | 18116082 | ID=Msa0980150-mRNA-1:exon:5582;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18116375 | 18116438 | 18116375 | ID=Msa0980150-mRNA-1:exon:5583;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18116512 | 18116607 | 18116512 | ID=Msa0980150-mRNA-1:exon:5584;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18117014 | 18117109 | 18117014 | ID=Msa0980150-mRNA-1:exon:5585;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18117469 | 18117687 | 18117469 | ID=Msa0980150-mRNA-1:exon:5586;Parent=Msa0980150-mRNA-1 |
| chr6_4 | exon | 18118206 | 18118569 | 18118206 | ID=Msa0980150-mRNA-1:exon:5587;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18113335 | 18113449 | 18113335 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18113640 | 18113698 | 18113640 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18113922 | 18114029 | 18113922 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18114233 | 18114301 | 18114233 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18114579 | 18114719 | 18114579 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18114879 | 18114943 | 18114879 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18115234 | 18115330 | 18115234 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18115635 | 18115694 | 18115635 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18116082 | 18116225 | 18116082 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18116375 | 18116438 | 18116375 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18116512 | 18116607 | 18116512 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18117014 | 18117109 | 18117014 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18117469 | 18117687 | 18117469 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | CDS | 18118206 | 18118369 | 18118206 | ID=Msa0980150-mRNA-1:cds;Parent=Msa0980150-mRNA-1 |
| chr6_4 | three_prime_UTR | 18118370 | 18118569 | 18118370 | ID=Msa0980150-mRNA-1:three_prime_utr;Parent=Msa0980150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
