Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980850 | KEH25594.1 | 92.868 | 631 | 45 | 0 | 1 | 631 | 1 | 631 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980850 | sp|A7LXU3|BGH3B_BACO1 | 31.029 | 680 | 388 | 18 | 11 | 629 | 7 | 666 | 1.49e-92 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980850 | A0A072U752 | 92.868 | 631 | 45 | 0 | 1 | 631 | 1 | 631 | 0.0 | 1226 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040210 | Msa0980850 | 0.809255 | 2.071039e-50 | -8.615850e-47 |
| Msa0220090 | Msa0980850 | 0.803018 | 4.257920e-49 | -8.615850e-47 |
| Msa0448190 | Msa0980850 | 0.813630 | 2.321979e-51 | -8.615850e-47 |
| Msa0980850 | Msa1191640 | 0.815551 | 8.722936e-52 | -8.615850e-47 |
| Msa0878810 | Msa0980850 | 0.821986 | 3.015159e-53 | -8.615850e-47 |
| Msa0944470 | Msa0980850 | 0.808091 | 3.672531e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980850 | MtrunA17_Chr6g0461221 | 92.880 | 632 | 44 | 1 | 1 | 631 | 1 | 632 | 0.0 | 1219 |
| Msa0980850 | MtrunA17_Chr6g0461211 | 93.027 | 631 | 44 | 0 | 1 | 631 | 1 | 631 | 0.0 | 1210 |
| Msa0980850 | MtrunA17_Chr6g0461191 | 91.318 | 622 | 54 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1192 |
| Msa0980850 | MtrunA17_Chr6g0461231 | 83.866 | 626 | 101 | 0 | 1 | 626 | 1 | 626 | 0.0 | 1108 |
| Msa0980850 | MtrunA17_Chr3g0118971 | 74.920 | 626 | 157 | 0 | 1 | 626 | 1 | 626 | 0.0 | 992 |
| Msa0980850 | MtrunA17_Chr2g0292341 | 71.719 | 640 | 175 | 3 | 6 | 639 | 4 | 643 | 0.0 | 957 |
| Msa0980850 | MtrunA17_Chr7g0253561 | 71.714 | 601 | 170 | 0 | 26 | 626 | 2 | 602 | 0.0 | 927 |
| Msa0980850 | MtrunA17_Chr3g0104081 | 58.569 | 601 | 246 | 3 | 22 | 620 | 16 | 615 | 0.0 | 725 |
| Msa0980850 | MtrunA17_Chr5g0429581 | 55.241 | 601 | 256 | 5 | 28 | 620 | 5 | 600 | 0.0 | 681 |
| Msa0980850 | MtrunA17_Chr5g0429541 | 54.561 | 603 | 247 | 6 | 28 | 622 | 5 | 588 | 0.0 | 660 |
| Msa0980850 | MtrunA17_Chr7g0253551 | 66.595 | 464 | 147 | 3 | 1 | 463 | 1 | 457 | 0.0 | 633 |
| Msa0980850 | MtrunA17_Chr3g0115601 | 27.581 | 649 | 361 | 27 | 8 | 612 | 24 | 607 | 3.70e-44 | 170 |
| Msa0980850 | MtrunA17_Chr5g0425531 | 27.543 | 639 | 351 | 27 | 38 | 621 | 60 | 641 | 2.95e-42 | 164 |
| Msa0980850 | MtrunA17_Chr5g0425451 | 28.149 | 643 | 345 | 29 | 35 | 621 | 57 | 638 | 4.64e-42 | 164 |
| Msa0980850 | MtrunA17_Chr4g0050591 | 26.081 | 694 | 366 | 27 | 4 | 627 | 29 | 645 | 5.52e-41 | 160 |
| Msa0980850 | MtrunA17_Chr5g0425431 | 27.526 | 683 | 375 | 30 | 35 | 659 | 55 | 675 | 1.62e-40 | 159 |
| Msa0980850 | MtrunA17_Chr5g0425471 | 28.154 | 650 | 336 | 32 | 35 | 621 | 57 | 638 | 1.60e-39 | 156 |
| Msa0980850 | MtrunA17_Chr7g0269871 | 26.786 | 616 | 353 | 25 | 14 | 595 | 28 | 579 | 7.30e-38 | 151 |
| Msa0980850 | MtrunA17_Chr2g0278761 | 25.513 | 682 | 367 | 26 | 13 | 627 | 39 | 646 | 3.31e-35 | 143 |
| Msa0980850 | MtrunA17_Chr2g0294751 | 24.686 | 717 | 397 | 31 | 10 | 662 | 23 | 660 | 1.50e-32 | 134 |
| Msa0980850 | MtrunA17_Chr1g0207281 | 26.171 | 619 | 331 | 28 | 37 | 603 | 63 | 607 | 3.94e-31 | 130 |
| Msa0980850 | MtrunA17_Chr5g0411571 | 26.833 | 641 | 353 | 35 | 95 | 659 | 64 | 664 | 2.01e-30 | 128 |
| Msa0980850 | MtrunA17_Chr1g0194841 | 23.810 | 756 | 419 | 30 | 14 | 702 | 23 | 688 | 6.01e-29 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980850 | AT5G04885.2 | 66.933 | 626 | 204 | 3 | 1 | 624 | 18 | 642 | 0.0 | 911 |
| Msa0980850 | AT5G04885.3 | 66.933 | 626 | 204 | 3 | 1 | 624 | 1 | 625 | 0.0 | 910 |
| Msa0980850 | AT5G04885.1 | 66.933 | 626 | 204 | 3 | 1 | 624 | 1 | 625 | 0.0 | 910 |
| Msa0980850 | AT5G20950.3 | 71.961 | 617 | 171 | 2 | 11 | 627 | 88 | 702 | 0.0 | 909 |
| Msa0980850 | AT5G20950.2 | 71.961 | 617 | 171 | 2 | 11 | 627 | 10 | 624 | 0.0 | 905 |
| Msa0980850 | AT5G20950.1 | 71.961 | 617 | 171 | 2 | 11 | 627 | 10 | 624 | 0.0 | 905 |
| Msa0980850 | AT5G20940.1 | 70.656 | 610 | 174 | 3 | 16 | 623 | 18 | 624 | 0.0 | 852 |
| Msa0980850 | AT3G47000.1 | 59.406 | 606 | 243 | 3 | 20 | 623 | 2 | 606 | 0.0 | 745 |
| Msa0980850 | AT3G47010.1 | 57.825 | 607 | 251 | 4 | 20 | 622 | 1 | 606 | 0.0 | 719 |
| Msa0980850 | AT3G47040.4 | 58.097 | 599 | 248 | 3 | 24 | 620 | 6 | 603 | 0.0 | 716 |
| Msa0980850 | AT3G47010.2 | 57.496 | 607 | 252 | 5 | 20 | 622 | 1 | 605 | 0.0 | 708 |
| Msa0980850 | AT3G47040.1 | 55.769 | 624 | 248 | 4 | 24 | 620 | 6 | 628 | 0.0 | 702 |
| Msa0980850 | AT3G47050.1 | 57.262 | 599 | 251 | 4 | 28 | 624 | 10 | 605 | 0.0 | 698 |
| Msa0980850 | AT3G62710.1 | 56.940 | 634 | 227 | 11 | 21 | 622 | 31 | 650 | 0.0 | 692 |
| Msa0980850 | AT3G47040.2 | 53.797 | 632 | 256 | 7 | 24 | 620 | 6 | 636 | 0.0 | 665 |
| Msa0980850 | AT3G47000.3 | 60.633 | 442 | 174 | 0 | 20 | 461 | 2 | 443 | 0.0 | 570 |
| Msa0980850 | AT3G47010.4 | 58.980 | 451 | 182 | 2 | 20 | 468 | 1 | 450 | 0.0 | 547 |
| Msa0980850 | AT3G47040.3 | 58.904 | 438 | 180 | 0 | 24 | 461 | 6 | 443 | 0.0 | 544 |
| Msa0980850 | AT3G47000.2 | 58.372 | 430 | 176 | 3 | 196 | 623 | 1 | 429 | 2.23e-175 | 509 |
| Msa0980850 | AT3G47010.3 | 54.779 | 429 | 190 | 4 | 196 | 622 | 1 | 427 | 2.87e-161 | 473 |
| Msa0980850 | AT3G47050.2 | 56.065 | 371 | 163 | 0 | 28 | 398 | 10 | 380 | 2.03e-148 | 439 |
| Msa0980850 | AT5G64570.1 | 25.854 | 615 | 335 | 22 | 38 | 605 | 69 | 609 | 4.29e-38 | 152 |
| Msa0980850 | AT5G49360.1 | 25.678 | 701 | 380 | 36 | 13 | 648 | 34 | 658 | 1.27e-36 | 147 |
| Msa0980850 | AT3G19620.1 | 26.057 | 733 | 405 | 31 | 14 | 676 | 27 | 692 | 1.01e-35 | 145 |
| Msa0980850 | AT1G02640.1 | 26.021 | 661 | 371 | 29 | 14 | 621 | 30 | 625 | 2.54e-34 | 140 |
| Msa0980850 | AT5G09730.1 | 25.682 | 623 | 348 | 22 | 26 | 604 | 47 | 598 | 3.96e-34 | 140 |
| Msa0980850 | AT5G64570.3 | 25.546 | 595 | 330 | 22 | 38 | 590 | 69 | 592 | 7.50e-33 | 135 |
| Msa0980850 | AT5G10560.1 | 26.825 | 548 | 317 | 24 | 108 | 595 | 78 | 601 | 2.62e-32 | 134 |
| Msa0980850 | AT5G64570.2 | 27.389 | 471 | 288 | 19 | 162 | 605 | 8 | 451 | 6.48e-32 | 132 |
| Msa0980850 | AT1G78060.1 | 26.891 | 595 | 347 | 26 | 34 | 595 | 44 | 583 | 1.53e-29 | 125 |
| Msa0980850 | AT5G09700.1 | 26.687 | 326 | 198 | 15 | 301 | 603 | 43 | 350 | 6.74e-11 | 65.9 |
Find 160 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGTTGCTGCTTGGCTTCC+TGG | 0.207531 | 6_4:+19415744 | Msa0980850:CDS |
| ACAAACTCAAACTTGTAAAT+TGG | 0.223147 | 6_4:+19410540 | Msa0980850:five_prime_UTR |
| CCTTTGTTTCCATTTGGATT+TGG | 0.268762 | 6_4:+19415891 | Msa0980850:CDS |
| TTCCTAGGTGGAACAATTCT+TGG | 0.268968 | 6_4:-19418075 | None:intergenic |
| AATACTTCCTCTTCCTAAAA+AGG | 0.274540 | 6_4:+19414566 | Msa0980850:CDS |
| TTACTATAACTCGATCATTA+AGG | 0.274547 | 6_4:+19413502 | Msa0980850:CDS |
| TTTCCTCACAATGTTGGTTT+AGG | 0.279813 | 6_4:+19411797 | Msa0980850:CDS |
| ATGTGGCGCTACAATGTTAC+AGG | 0.284641 | 6_4:-19410502 | None:intergenic |
| TTTGGTGATTATGGATTTAC+TGG | 0.288249 | 6_4:+19415798 | Msa0980850:CDS |
| TATGATCCTTTGTTTCCATT+TGG | 0.288931 | 6_4:+19415885 | Msa0980850:CDS |
| TTTGCAGTAGCCTCTGGTTT+AGG | 0.293387 | 6_4:-19411653 | None:intergenic |
| TCACCATTTGTTTCAGCATA+TGG | 0.300792 | 6_4:-19415588 | None:intergenic |
| TTTGAGAGTCAAGTTTGTTA+TGG | 0.319929 | 6_4:+19414279 | Msa0980850:CDS |
| CGAGTATTCAATGGCTGCTT+TGG | 0.322794 | 6_4:-19411109 | None:intergenic |
| GACAATGGTAATTCAGAGTT+TGG | 0.326781 | 6_4:+19418030 | Msa0980850:CDS |
| TTCGTCCTTTAGGCTATGTT+TGG | 0.332232 | 6_4:+19418122 | Msa0980850:CDS |
| ATCGTTTCATATCCATTTCC+AGG | 0.333023 | 6_4:-19415630 | None:intergenic |
| CTTGGAATTCCAATGATCTA+TGG | 0.333242 | 6_4:+19411728 | Msa0980850:CDS |
| TCTTACTTTCCAACAACATA+TGG | 0.334173 | 6_4:-19413030 | None:intergenic |
| GGCTAGTGCTCTTCCATTGT+TGG | 0.335966 | 6_4:+19411047 | Msa0980850:CDS |
| AACTACACAAAATTCATTGA+TGG | 0.344518 | 6_4:+19414190 | Msa0980850:CDS |
| ATGACTTTGGAAGAGAAAAT+TGG | 0.358935 | 6_4:+19411154 | Msa0980850:CDS |
| TTGAGAGTCAAGTTTGTTAT+GGG | 0.359086 | 6_4:+19414280 | Msa0980850:CDS |
| ACACCATTTGACCAATTTGC+AGG | 0.367326 | 6_4:-19413006 | None:intergenic |
| AACTTAACAATACCTGGAAA+TGG | 0.396892 | 6_4:+19415618 | Msa0980850:CDS |
| GCTATGACTGAGATCATTCC+AGG | 0.397009 | 6_4:+19412967 | Msa0980850:CDS |
| GGTCAAAGGTGCAATCTCTT+TGG | 0.400465 | 6_4:+19411021 | Msa0980850:CDS |
| TCATATGCAATTGTGGTAGT+TGG | 0.403466 | 6_4:+19415558 | Msa0980850:CDS |
| GCTAGTGCTCTTCCATTGTT+GGG | 0.406816 | 6_4:+19411048 | Msa0980850:CDS |
| TTCTGAACAATTCGTCCTTT+AGG | 0.409052 | 6_4:+19418112 | Msa0980850:CDS |
| GCTTGTGCTAAGCACTTTGT+TGG | 0.414175 | 6_4:+19413398 | Msa0980850:CDS |
| GCATCATCAATTCTACTCAT+AGG | 0.418003 | 6_4:-19414244 | None:intergenic |
| TCATAACATCTACCCCATCT+TGG | 0.418401 | 6_4:-19412913 | None:intergenic |
| CAAAGGTGCAATCTCTTTGG+TGG | 0.423329 | 6_4:+19411024 | Msa0980850:CDS |
| GTAATGAACAAGTTCTTCAT+TGG | 0.424443 | 6_4:+19411217 | Msa0980850:CDS |
| ACTTTGTCCTTGCCATTGAA+TGG | 0.425237 | 6_4:-19414652 | None:intergenic |
| CAATCCTTTGCAGTAGCCTC+TGG | 0.432251 | 6_4:-19411659 | None:intergenic |
| CTTCCTGGTAGTGAAGGTTC+TGG | 0.434268 | 6_4:+19415759 | Msa0980850:CDS |
| GCTCTTGAATCCAGAGCAAC+TGG | 0.435231 | 6_4:+19412604 | Msa0980850:CDS |
| TACTATAACTCGATCATTAA+GGG | 0.440334 | 6_4:+19413503 | Msa0980850:CDS |
| CAGAGGCTACTGCAAAGGAT+TGG | 0.443657 | 6_4:+19411660 | Msa0980850:CDS |
| ATAGGGAATTCCAGTTGCTC+TGG | 0.445838 | 6_4:-19412614 | None:intergenic |
| TATGGAATTGATGCTGTTCA+TGG | 0.446679 | 6_4:+19411746 | Msa0980850:CDS |
| TTGACAGGAGCATAGGGAAT+TGG | 0.446853 | 6_4:+19414482 | Msa0980850:intron |
| AAAAGGGTGCTTTATCAACT+AGG | 0.448966 | 6_4:+19411705 | Msa0980850:CDS |
| CCATATCTTAACAAAATTGA+CGG | 0.451612 | 6_4:+19415720 | Msa0980850:CDS |
| AAAGGTGCAATCTCTTTGGT+GGG | 0.454041 | 6_4:+19411025 | Msa0980850:CDS |
| TGTCTGGCTCTCAAGGGAAA+TGG | 0.456688 | 6_4:+19418008 | Msa0980850:CDS |
| AGAGGCTACTGCAAAGGATT+GGG | 0.457198 | 6_4:+19411661 | Msa0980850:CDS |
| TGAGAATCACCAACATTCAT+TGG | 0.457783 | 6_4:-19415861 | None:intergenic |
| TCTTATTGACAGGATGACTT+TGG | 0.460565 | 6_4:+19411141 | Msa0980850:CDS |
| CCAATCTTCTTCACTAGTTG+AGG | 0.460875 | 6_4:-19412571 | None:intergenic |
| TTATTTGAAAATCCATTGGC+TGG | 0.463194 | 6_4:+19414304 | Msa0980850:CDS |
| TGTTAACTGTCTGGCTCTCA+AGG | 0.470924 | 6_4:+19418001 | Msa0980850:CDS |
| GGGAGGTCACCTTGTAGTCC+TGG | 0.473071 | 6_4:-19412985 | None:intergenic |
| GCTAATCGCGATTTAGTCAC+TGG | 0.474440 | 6_4:+19413578 | Msa0980850:CDS |
| GGAAGTCATGCTGATAATCT+AGG | 0.476951 | 6_4:+19414609 | Msa0980850:CDS |
| AATTGGCTAGGGAAGCTGTT+AGG | 0.481660 | 6_4:+19414499 | Msa0980850:CDS |
| GCCAGACTTTACTTATATCC+CGG | 0.481881 | 6_4:-19418053 | None:intergenic |
| GCTAAGCACTTTGTTGGTGA+TGG | 0.484711 | 6_4:+19413404 | Msa0980850:CDS |
| GGGCTTATTTGAAAATCCAT+TGG | 0.485031 | 6_4:+19414300 | Msa0980850:CDS |
| TGCCGATCATCTCGGGAGCC+AGG | 0.485032 | 6_4:+19414336 | Msa0980850:CDS |
| ATGGTAATTCAGAGTTTGGC+CGG | 0.485208 | 6_4:+19418034 | Msa0980850:CDS |
| GTCTCATACTCAAGCTGGAA+TGG | 0.485589 | 6_4:+19413542 | Msa0980850:CDS |
| CTCCCTGCAAATTGGTCAAA+TGG | 0.486667 | 6_4:+19413003 | Msa0980850:CDS |
| GTTGTAAGACCAAATCCAAA+TGG | 0.487890 | 6_4:-19415900 | None:intergenic |
| GCATCAATTCCATAGATCAT+TGG | 0.488919 | 6_4:-19411737 | None:intergenic |
| GGTGCTTTATCAACTAGGCT+TGG | 0.489170 | 6_4:+19411710 | Msa0980850:CDS |
| GGAAGAGAAAATTGGTCAGA+TGG | 0.489826 | 6_4:+19411162 | Msa0980850:CDS |
| ACAGCCTTGCCGATCATCTC+GGG | 0.489989 | 6_4:+19414329 | Msa0980850:CDS |
| AATGGTGTTCCATATGTTGT+TGG | 0.490493 | 6_4:+19413021 | Msa0980850:CDS |
| CAATCTTCTTCACTAGTTGA+GGG | 0.490983 | 6_4:-19412570 | None:intergenic |
| AGATATGGTTGTATAACAAC+AGG | 0.491869 | 6_4:-19415705 | None:intergenic |
| TTGACGGACTCGTTGCTGCT+TGG | 0.493350 | 6_4:+19415736 | Msa0980850:CDS |
| TCCTTGATTCGAGTATTCAA+TGG | 0.493545 | 6_4:-19411118 | None:intergenic |
| TACAGCCTTGCCGATCATCT+CGG | 0.497320 | 6_4:+19414328 | Msa0980850:CDS |
| ATCAATTCTACTCATAGGTA+TGG | 0.497404 | 6_4:-19414239 | None:intergenic |
| AGCTTAAACTTAACAATACC+TGG | 0.499208 | 6_4:+19415612 | Msa0980850:CDS |
| ACAGTCTTAAACCATGTCCT+TGG | 0.500169 | 6_4:-19415828 | None:intergenic |
| AAGGTGACCTCCCTGCAAAT+TGG | 0.503110 | 6_4:+19412995 | Msa0980850:CDS |
| GCCATTGAATACTCGAATCA+AGG | 0.509987 | 6_4:+19411117 | Msa0980850:CDS |
| GGAAGCTGTTAGGAAATCAT+TGG | 0.510200 | 6_4:+19414509 | Msa0980850:CDS |
| GATTTACTGGTAAACTTCCA+AGG | 0.512930 | 6_4:+19415811 | Msa0980850:CDS |
| CTTCCATTGTTGGGTAGCAA+TGG | 0.513541 | 6_4:+19411057 | Msa0980850:CDS |
| CTGGTAAACTTCCAAGGACA+TGG | 0.514583 | 6_4:+19415817 | Msa0980850:CDS |
| CACCATTTGACCAATTTGCA+GGG | 0.515585 | 6_4:-19413005 | None:intergenic |
| TCATAACTTGACAGGAGCAT+AGG | 0.517406 | 6_4:+19414475 | Msa0980850:intron |
| ATGTGTAGTTAGCATGAGGA+GGG | 0.520254 | 6_4:-19413905 | None:intergenic |
| GAATGATCTCAGTCATAGCT+TGG | 0.521713 | 6_4:-19412963 | None:intergenic |
| TCATGGTCTCATACTCAAGC+TGG | 0.522463 | 6_4:+19413537 | Msa0980850:CDS |
| CATAACTTGACAGGAGCATA+GGG | 0.523089 | 6_4:+19414476 | Msa0980850:intron |
| GATGCAAGGTGCAAAGACAT+AGG | 0.523592 | 6_4:-19412632 | None:intergenic |
| GCTTGGCTTCCTGGTAGTGA+AGG | 0.524504 | 6_4:+19415753 | Msa0980850:CDS |
| AATGCTAAACAATTCATGTC+TGG | 0.527096 | 6_4:-19413468 | None:intergenic |
| GCCGGGATATAAGTAAAGTC+TGG | 0.527604 | 6_4:+19418052 | Msa0980850:CDS |
| CCTCAACTAGTGAAGAAGAT+TGG | 0.527632 | 6_4:+19412571 | Msa0980850:CDS |
| ATCTAAATTACCGCGATGCA+AGG | 0.528542 | 6_4:-19412646 | None:intergenic |
| GGTGATGGTGGAACAACAAA+AGG | 0.530634 | 6_4:+19413419 | Msa0980850:CDS |
| AGGTGTGTAGAGATCCAAGA+TGG | 0.530916 | 6_4:+19412899 | Msa0980850:intron |
| ACACCAGAACCTTCACTACC+AGG | 0.532949 | 6_4:-19415762 | None:intergenic |
| GTCAATACCGGCATTCACTC+CGG | 0.534490 | 6_4:-19413940 | None:intergenic |
| ACACCATATGCTGAAACAAA+TGG | 0.536678 | 6_4:+19415585 | Msa0980850:CDS |
| ATAGTTTACCATGTCAATAC+CGG | 0.536805 | 6_4:-19413952 | None:intergenic |
| TCAATGGAGGCCTTTACAAA+AGG | 0.539947 | 6_4:+19417586 | Msa0980850:CDS |
| ATTCTCCTCATAGACTACCT+TGG | 0.543119 | 6_4:-19415502 | None:intergenic |
| TAGGATATCAATGTGGTGGA+TGG | 0.546231 | 6_4:+19414628 | Msa0980850:CDS |
| GGTAAAGTATTACCCTGAAA+CGG | 0.549732 | 6_4:-19413619 | None:intergenic |
| GACACAACGAGCGTGCTCAA+TGG | 0.552344 | 6_4:+19417570 | Msa0980850:CDS |
| AGACATGGAATGAACCGTCT+AGG | 0.553359 | 6_4:+19417967 | Msa0980850:intron |
| AGAAACCAAGGTAGTCTATG+AGG | 0.557127 | 6_4:+19415497 | Msa0980850:CDS |
| CCAAATCCAAATGGAAACAA+AGG | 0.564140 | 6_4:-19415891 | None:intergenic |
| AAGCACTTTGTTGGTGATGG+TGG | 0.566034 | 6_4:+19413407 | Msa0980850:CDS |
| TCATTGGTACTATTAAAGAA+TGG | 0.567660 | 6_4:+19414525 | Msa0980850:CDS |
| GAATCAAGGATCTTATTGAC+AGG | 0.568861 | 6_4:+19411131 | Msa0980850:CDS |
| TGGTAATTCAGAGTTTGGCC+GGG | 0.569303 | 6_4:+19418035 | Msa0980850:CDS |
| TGTGTAGTTAGCATGAGGAG+GGG | 0.570833 | 6_4:-19413904 | None:intergenic |
| ATGATCGAGTTATAGTAAGC+TGG | 0.571426 | 6_4:-19413497 | None:intergenic |
| GAGATCATTCCAGGACTACA+AGG | 0.576993 | 6_4:+19412976 | Msa0980850:CDS |
| CTGTTCCAAACATAGCCTAA+AGG | 0.580302 | 6_4:-19418127 | None:intergenic |
| GTGGTGGATGGACCATTCAA+TGG | 0.584567 | 6_4:+19414640 | Msa0980850:CDS |
| ATTGAAGCCGGAGTGAATGC+CGG | 0.584899 | 6_4:+19413933 | Msa0980850:CDS |
| TTGGAACAGCATAAACAAGT+AGG | 0.586110 | 6_4:+19418141 | Msa0980850:CDS |
| AGGAGCATAGGGAATTGGCT+AGG | 0.589287 | 6_4:+19414487 | Msa0980850:intron |
| CAGATTGGGAGGGAATCGAC+AGG | 0.592552 | 6_4:+19413874 | Msa0980850:CDS |
| ATGCAAGGTGCAAAGACATA+GGG | 0.594625 | 6_4:-19412631 | None:intergenic |
| TGAGAGGTAGAAATGGTCAA+AGG | 0.597595 | 6_4:+19411007 | Msa0980850:exon |
| TAAGGGTGTCTTAACCGTCA+TGG | 0.598488 | 6_4:+19413520 | Msa0980850:CDS |
| GGAGCATAGGGAATTGGCTA+GGG | 0.600935 | 6_4:+19414488 | Msa0980850:intron |
| CTGCCATTGCTACCCAACAA+TGG | 0.601312 | 6_4:-19411060 | None:intergenic |
| TGTGTCGTTGTGTTAATCAC+TGG | 0.601366 | 6_4:+19415678 | Msa0980850:CDS |
| AATGTGTAGTTAGCATGAGG+AGG | 0.603783 | 6_4:-19413906 | None:intergenic |
| GCAAGGCTGTAACCAGCCAA+TGG | 0.607621 | 6_4:-19414316 | None:intergenic |
| TAAACCAGAGGCTACTGCAA+AGG | 0.609621 | 6_4:+19411655 | Msa0980850:CDS |
| GAAAATGTGTAGTTAGCATG+AGG | 0.610943 | 6_4:-19413909 | None:intergenic |
| GGATGGACCATTCAATGGCA+AGG | 0.613470 | 6_4:+19414645 | Msa0980850:CDS |
| AGTTGCTCTGGATTCAAGAG+CGG | 0.616666 | 6_4:-19412602 | None:intergenic |
| CGCAGTCGACAAAGAAACCA+AGG | 0.618907 | 6_4:+19415485 | Msa0980850:CDS |
| GCTCCTAAACCAACATTGTG+AGG | 0.622167 | 6_4:-19411800 | None:intergenic |
| AGTGAATGCCGGTATTGACA+TGG | 0.622551 | 6_4:+19413944 | Msa0980850:CDS |
| GGTGTGTAGAGATCCAAGAT+GGG | 0.624358 | 6_4:+19412900 | Msa0980850:intron |
| GATCAGTTGCCAATGAATGT+TGG | 0.625929 | 6_4:+19415852 | Msa0980850:CDS |
| CTCTCAAGGGAAATGGACAA+TGG | 0.626421 | 6_4:+19418015 | Msa0980850:CDS |
| ATGTTGGTTTAGGAGCTACA+AGG | 0.629390 | 6_4:+19411807 | Msa0980850:CDS |
| ACAACGAGCGTGCTCAATGG+AGG | 0.630601 | 6_4:+19417573 | Msa0980850:CDS |
| TTTGTCATATCAGATTGGGA+GGG | 0.632775 | 6_4:+19413864 | Msa0980850:CDS |
| ATTCAATGGCAAGGACAAAG+TGG | 0.639870 | 6_4:+19414654 | Msa0980850:CDS |
| GTTAACTGTCTGGCTCTCAA+GGG | 0.644153 | 6_4:+19418002 | Msa0980850:CDS |
| AATCTAGGATATCAATGTGG+TGG | 0.656695 | 6_4:+19414624 | Msa0980850:CDS |
| CATTTGACCAATTTGCAGGG+AGG | 0.659757 | 6_4:-19413002 | None:intergenic |
| GTGTGTAGAGATCCAAGATG+GGG | 0.659919 | 6_4:+19412901 | Msa0980850:CDS |
| ACGATAAACAATGTATGCAG+CGG | 0.660556 | 6_4:+19415648 | Msa0980850:CDS |
| TGTCTTTGCACCTTGCATCG+CGG | 0.675292 | 6_4:+19412636 | Msa0980850:CDS |
| AAGGTGCAATCTCTTTGGTG+GGG | 0.683255 | 6_4:+19411026 | Msa0980850:CDS |
| AACCTGGCTCCCGAGATGAT+CGG | 0.683692 | 6_4:-19414338 | None:intergenic |
| AGGAAGTGTTCCTAAACCAG+AGG | 0.705485 | 6_4:+19411643 | Msa0980850:CDS |
| AGTGGCAACAACATCACCAG+TGG | 0.719748 | 6_4:+19414672 | Msa0980850:CDS |
| GCTTGAGTATGAGACCATGA+CGG | 0.722634 | 6_4:-19413534 | None:intergenic |
| GGCCAAGAATTGTTCCACCT+AGG | 0.724723 | 6_4:+19418073 | Msa0980850:CDS |
| GATAATCTAGGATATCAATG+TGG | 0.794698 | 6_4:+19414621 | Msa0980850:CDS |
| AACAACAAAAGGAATCACTG+AGG | 0.798900 | 6_4:+19413430 | Msa0980850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAAAATAAAAAA+TGG | + | chr6_4:19411987-19412006 | Msa0980850:intron | 0.0% |
| !! | TTTAATGTATTGAAATTATA+TGG | + | chr6_4:19412312-19412331 | Msa0980850:intron | 10.0% |
| !!! | TTTATTTATTTTTTACCATT+AGG | + | chr6_4:19414006-19414025 | Msa0980850:intron | 10.0% |
| !! | TAATTAATTGATAAAATTTG+GGG | - | chr6_4:19417044-19417063 | None:intergenic | 10.0% |
| !! | TAATTATTTAAACAATCATT+AGG | + | chr6_4:19417058-19417077 | Msa0980850:intron | 10.0% |
| !! | AATTATTTAAACAATCATTA+GGG | + | chr6_4:19417059-19417078 | Msa0980850:intron | 10.0% |
| !! | TGAAAAGTTTATTAATCTAA+CGG | - | chr6_4:19410680-19410699 | None:intergenic | 15.0% |
| !!! | TTAATAAACTTTTCATCTAA+CGG | + | chr6_4:19410685-19410704 | Msa0980850:intron | 15.0% |
| !!! | TTTTCATTAATGATATGATA+AGG | + | chr6_4:19410895-19410914 | Msa0980850:intron | 15.0% |
| !! | AGTTTAAAAGACAAAAATTT+AGG | - | chr6_4:19411255-19411274 | None:intergenic | 15.0% |
| !!! | ATTTTCACACAAAAAAATAT+AGG | - | chr6_4:19411837-19411856 | None:intergenic | 15.0% |
| !!! | AACATCACTAAAAATTTTAT+AGG | - | chr6_4:19412128-19412147 | None:intergenic | 15.0% |
| !!! | TGAATTTAAAATTGATGTTT+TGG | + | chr6_4:19413287-19413306 | Msa0980850:intron | 15.0% |
| !! | TTAAATCAATGATTAAAAAC+CGG | - | chr6_4:19414971-19414990 | None:intergenic | 15.0% |
| !!! | ATATGTATTTTATCTATGTT+TGG | + | chr6_4:19416050-19416069 | Msa0980850:intron | 15.0% |
| !! | ACAAAAAACATAAATTTGAT+TGG | - | chr6_4:19416107-19416126 | None:intergenic | 15.0% |
| !!! | ACAAAAAATGTAATATCTTT+TGG | - | chr6_4:19416296-19416315 | None:intergenic | 15.0% |
| !! | TTTCATGACTAAAATTGAAA+TGG | + | chr6_4:19410798-19410817 | Msa0980850:intron | 20.0% |
| !! | TTCATGACTAAAATTGAAAT+GGG | + | chr6_4:19410799-19410818 | Msa0980850:intron | 20.0% |
| !! | TTTCATGTTGTAATCTATTT+CGG | + | chr6_4:19411423-19411442 | Msa0980850:intron | 20.0% |
| !!! | TATGATCAATGATTTTCAAA+AGG | + | chr6_4:19411688-19411707 | Msa0980850:CDS | 20.0% |
| !!! | ATGATCAATGATTTTCAAAA+GGG | + | chr6_4:19411689-19411708 | Msa0980850:CDS | 20.0% |
| !!! | AAACTATTTTCTTCCAAAAA+AGG | - | chr6_4:19411875-19411894 | None:intergenic | 20.0% |
| !!! | CCAGTTGTAATTTTTTTATT+TGG | - | chr6_4:19412075-19412094 | None:intergenic | 20.0% |
| !! | CCAAATAAAAAAATTACAAC+TGG | + | chr6_4:19412072-19412091 | Msa0980850:intron | 20.0% |
| !! | ATGATCTTGCATTATATTAT+AGG | - | chr6_4:19412104-19412123 | None:intergenic | 20.0% |
| !! | ACAATAAAGTCTAATATCAT+AGG | - | chr6_4:19412235-19412254 | None:intergenic | 20.0% |
| !! | TGAAATTATATGGATCAAAT+CGG | + | chr6_4:19412322-19412341 | Msa0980850:intron | 20.0% |
| !! | AAGTCATAGTGAAAAAAAAA+AGG | - | chr6_4:19412508-19412527 | None:intergenic | 20.0% |
| !! | AAGTATATATAAAGATGCAA+CGG | - | chr6_4:19413066-19413085 | None:intergenic | 20.0% |
| !! | CAAAATTAACAATTAAAAGC+AGG | - | chr6_4:19413139-19413158 | None:intergenic | 20.0% |
| !!! | CTGCTTTTAATTGTTAATTT+TGG | + | chr6_4:19413137-19413156 | Msa0980850:intron | 20.0% |
| !! | GTAATAAAAGTAATAGATGA+AGG | - | chr6_4:19413199-19413218 | None:intergenic | 20.0% |
| !! | TTTGATTACAAATTCAACTT+TGG | + | chr6_4:19413232-19413251 | Msa0980850:intron | 20.0% |
| !! | TTTATCATTATTCATGTCAT+AGG | - | chr6_4:19413317-19413336 | None:intergenic | 20.0% |
| !!! | ATCGATAAACAAACAATTTT+AGG | - | chr6_4:19413798-19413817 | None:intergenic | 20.0% |
| !!! | AATGAATTTTGTGTAGTTAT+GGG | - | chr6_4:19414188-19414207 | None:intergenic | 20.0% |
| !! | ATTATGAAAAAAAGATGAGA+AGG | - | chr6_4:19414712-19414731 | None:intergenic | 20.0% |
| !!! | ACTGATTTAATCATACTTTA+AGG | - | chr6_4:19414791-19414810 | None:intergenic | 20.0% |
| !! | TTGTCAAATAATCATTATTG+CGG | + | chr6_4:19415384-19415403 | Msa0980850:intron | 20.0% |
| !!! | GATTTTACATAATCTAATGA+AGG | - | chr6_4:19415528-19415547 | None:intergenic | 20.0% |
| !!! | ATTTTTTCTACTTTAGATGT+TGG | + | chr6_4:19416009-19416028 | Msa0980850:intron | 20.0% |
| !! | TTTGTTTAGACAAATATTAG+TGG | + | chr6_4:19416122-19416141 | Msa0980850:intron | 20.0% |
| !! | ATATTAGTGGTTAAATTGTT+AGG | + | chr6_4:19416135-19416154 | Msa0980850:intron | 20.0% |
| !! | TATTAGTGGTTAAATTGTTA+GGG | + | chr6_4:19416136-19416155 | Msa0980850:intron | 20.0% |
| !!! | TGTTCTAAGAAATAAATCTT+AGG | + | chr6_4:19416313-19416332 | Msa0980850:intron | 20.0% |
| !! | TATAGAGAATGAAATCAAAA+TGG | + | chr6_4:19417132-19417151 | Msa0980850:intron | 20.0% |
| !! | TCTCCAAAAAGTTATAATTA+AGG | + | chr6_4:19417893-19417912 | Msa0980850:intron | 20.0% |
| !! | GTACAAAACAAACTTTTATG+TGG | - | chr6_4:19410522-19410541 | None:intergenic | 25.0% |
| ! | ACAAACTCAAACTTGTAAAT+TGG | + | chr6_4:19410540-19410559 | Msa0980850:five_prime_UTR | 25.0% |
| ! | TTGTTAAAATGAATCAGCAA+TGG | + | chr6_4:19410633-19410652 | Msa0980850:intron | 25.0% |
| !!! | GTCTAGAACTATTTTATGAA+TGG | + | chr6_4:19410821-19410840 | Msa0980850:intron | 25.0% |
| !! | GTTTTCTAATTACCAAACAT+TGG | + | chr6_4:19410860-19410879 | Msa0980850:intron | 25.0% |
| ! | TAAACTACTAAACCAATGTT+TGG | - | chr6_4:19410875-19410894 | None:intergenic | 25.0% |
| !!! | TATTTTGAAGTTGTTTTGAG+AGG | + | chr6_4:19410991-19411010 | Msa0980850:intron | 25.0% |
| ! | CGAGATAAAAAGAAAAAACT+TGG | - | chr6_4:19411339-19411358 | None:intergenic | 25.0% |
| !!! | TTGCAATGTTATTTCAATTG+AGG | + | chr6_4:19411363-19411382 | Msa0980850:intron | 25.0% |
| ! | TCGATTTAGACAATCAATTT+AGG | + | chr6_4:19411513-19411532 | Msa0980850:intron | 25.0% |
| !! | AGATGCAAATAGTTTGTATT+AGG | + | chr6_4:19411567-19411586 | Msa0980850:intron | 25.0% |
| !!! | AAGTTCTTCAAATCCTTTTT+TGG | + | chr6_4:19411859-19411878 | Msa0980850:intron | 25.0% |
| ! | ATAGAGTAAAAGTCAACTAA+AGG | - | chr6_4:19412203-19412222 | None:intergenic | 25.0% |
| !! | AAACAAGCAAGCAATAATTT+TGG | + | chr6_4:19412255-19412274 | Msa0980850:intron | 25.0% |
| !!! | TTTTTTATATCCCAAATTGC+AGG | + | chr6_4:19412545-19412564 | Msa0980850:intron | 25.0% |
| !! | TTTTTATATCCCAAATTGCA+GGG | + | chr6_4:19412546-19412565 | Msa0980850:intron | 25.0% |
| ! | TGAACAGTATTATCAAATAG+TGG | - | chr6_4:19412851-19412870 | None:intergenic | 25.0% |
| ! | ACATATGTTTGTGTGTATAT+AGG | + | chr6_4:19412879-19412898 | Msa0980850:intron | 25.0% |
| ! | TTACTATAACTCGATCATTA+AGG | + | chr6_4:19413502-19413521 | Msa0980850:CDS | 25.0% |
| ! | TACTATAACTCGATCATTAA+GGG | + | chr6_4:19413503-19413522 | Msa0980850:CDS | 25.0% |
| ! | GTTTGTAACTATGAAATCAA+AGG | - | chr6_4:19413652-19413671 | None:intergenic | 25.0% |
| !! | ATGAATTTTGTGTAGTTATG+GGG | - | chr6_4:19414187-19414206 | None:intergenic | 25.0% |
| !! | CAATGAATTTTGTGTAGTTA+TGG | - | chr6_4:19414189-19414208 | None:intergenic | 25.0% |
| ! | AACTACACAAAATTCATTGA+TGG | + | chr6_4:19414190-19414209 | Msa0980850:CDS | 25.0% |
| ! | TCATTGGTACTATTAAAGAA+TGG | + | chr6_4:19414525-19414544 | Msa0980850:CDS | 25.0% |
| !!! | GCAATTGTTACTTGAATTTT+CGG | - | chr6_4:19414756-19414775 | None:intergenic | 25.0% |
| !!! | TGGTTTTATCTTAATTCAAG+TGG | + | chr6_4:19414894-19414913 | Msa0980850:intron | 25.0% |
| !! | TTTTCCTTTATGTTGTCAAA+TGG | + | chr6_4:19415077-19415096 | Msa0980850:intron | 25.0% |
| ! | CTCTTGTGTAAAAAAAAACA+GGG | + | chr6_4:19415184-19415203 | Msa0980850:intron | 25.0% |
| ! | TAAAATACACCAAAAATGGT+GGG | + | chr6_4:19415217-19415236 | Msa0980850:intron | 25.0% |
| ! | AATTGCATATGAAAAATCGT+TGG | - | chr6_4:19415550-19415569 | None:intergenic | 25.0% |
| ! | CCATATCTTAACAAAATTGA+CGG | + | chr6_4:19415720-19415739 | Msa0980850:CDS | 25.0% |
| ! | TCTAAGAAATAAATCTTAGG+AGG | + | chr6_4:19416316-19416335 | Msa0980850:intron | 25.0% |
| ! | AAACCTCAAAGTCATATTTA+TGG | + | chr6_4:19416961-19416980 | Msa0980850:intron | 25.0% |
| ! | TCATTCTCTATAGCAATATT+TGG | - | chr6_4:19417124-19417143 | None:intergenic | 25.0% |
| !!! | TAATTTTTTTCTCCGAAGTT+TGG | + | chr6_4:19417524-19417543 | Msa0980850:intron | 25.0% |
| ! | ATGATAGGAATAAGATTATG+TGG | + | chr6_4:19417847-19417866 | Msa0980850:intron | 25.0% |
| !! | TCGCCTTAATTATAACTTTT+TGG | - | chr6_4:19417899-19417918 | None:intergenic | 25.0% |
| !! | ATTACCTTTCATTTTAGACA+TGG | + | chr6_4:19417952-19417971 | Msa0980850:intron | 25.0% |
| !!! | ATAACTTCATTTTGATTCCT+AGG | - | chr6_4:19418093-19418112 | None:intergenic | 25.0% |
| CTACAATGTTACAGGAAAAA+AGG | - | chr6_4:19410497-19410516 | None:intergenic | 30.0% | |
| TAAAATGAATCAGCAATGGT+TGG | + | chr6_4:19410637-19410656 | Msa0980850:intron | 30.0% | |
| !! | TCGAAGTTTTTGTTTATTGG+TGG | + | chr6_4:19410767-19410786 | Msa0980850:intron | 30.0% |
| ! | ATGACTTTGGAAGAGAAAAT+TGG | + | chr6_4:19411154-19411173 | Msa0980850:CDS | 30.0% |
| GTAATGAACAAGTTCTTCAT+TGG | + | chr6_4:19411217-19411236 | Msa0980850:CDS | 30.0% | |
| ATTTCAATTGAGGTTGCATA+TGG | + | chr6_4:19411373-19411392 | Msa0980850:intron | 30.0% | |
| TGATTGTCTAAATCGATAGT+CGG | - | chr6_4:19411509-19411528 | None:intergenic | 30.0% | |
| TCAATTTAGGTCAAATAGCT+AGG | + | chr6_4:19411526-19411545 | Msa0980850:intron | 30.0% | |
| !!! | TTTATAGGGAGTGTTTTAAG+TGG | + | chr6_4:19411617-19411636 | Msa0980850:intron | 30.0% |
| !! | ACTATTTTTCCTCACAATGT+TGG | + | chr6_4:19411791-19411810 | Msa0980850:CDS | 30.0% |
| ! | TTTTGGTATATGAATGTGTG+AGG | + | chr6_4:19412272-19412291 | Msa0980850:intron | 30.0% |
| ACTAAAGAAAGACAAATTCG+AGG | + | chr6_4:19412375-19412394 | Msa0980850:intron | 30.0% | |
| ! | ATTTTCTACGATTGACAAAG+AGG | - | chr6_4:19412690-19412709 | None:intergenic | 30.0% |
| ACACACAAACATATGTCATA+AGG | - | chr6_4:19412875-19412894 | None:intergenic | 30.0% | |
| TCTTACTTTCCAACAACATA+TGG | - | chr6_4:19413033-19413052 | None:intergenic | 30.0% | |
| TTGTTTCCTATCCAATAGTT+CGG | + | chr6_4:19413084-19413103 | Msa0980850:intron | 30.0% | |
| AATGCTAAACAATTCATGTC+TGG | - | chr6_4:19413471-19413490 | None:intergenic | 30.0% | |
| TATGAAATCAAAGGCTTATG+AGG | - | chr6_4:19413643-19413662 | None:intergenic | 30.0% | |
| AATACGATGACTGTGTAAAA+TGG | + | chr6_4:19413730-19413749 | Msa0980850:intron | 30.0% | |
| ATACGATGACTGTGTAAAAT+GGG | + | chr6_4:19413731-19413750 | Msa0980850:intron | 30.0% | |
| !! | AAGTTCTTATGTTTTCAAGC+AGG | + | chr6_4:19413839-19413858 | Msa0980850:intron | 30.0% |
| !! | AGTTCTTATGTTTTCAAGCA+GGG | + | chr6_4:19413840-19413859 | Msa0980850:intron | 30.0% |
| ! | TACACATTTTCAATTGAAGC+CGG | + | chr6_4:19413921-19413940 | Msa0980850:CDS | 30.0% |
| ATAGTTTACCATGTCAATAC+CGG | - | chr6_4:19413955-19413974 | None:intergenic | 30.0% | |
| ATATCGAGTTCAATTCCTAA+TGG | - | chr6_4:19414024-19414043 | None:intergenic | 30.0% | |
| GAATTGAACTCGATATTCTA+GGG | + | chr6_4:19414028-19414047 | Msa0980850:intron | 30.0% | |
| ATCAATTCTACTCATAGGTA+TGG | - | chr6_4:19414242-19414261 | None:intergenic | 30.0% | |
| !! | TTTGAGAGTCAAGTTTGTTA+TGG | + | chr6_4:19414279-19414298 | Msa0980850:CDS | 30.0% |
| !! | TTGAGAGTCAAGTTTGTTAT+GGG | + | chr6_4:19414280-19414299 | Msa0980850:CDS | 30.0% |
| TTATTTGAAAATCCATTGGC+TGG | + | chr6_4:19414304-19414323 | Msa0980850:CDS | 30.0% | |
| AGCTCGGAGTTTATTAATTT+GGG | + | chr6_4:19414369-19414388 | Msa0980850:intron | 30.0% | |
| !! | TTTTTAGGAAGAGGAAGTAT+TGG | - | chr6_4:19414567-19414586 | None:intergenic | 30.0% |
| AATACTTCCTCTTCCTAAAA+AGG | + | chr6_4:19414566-19414585 | Msa0980850:CDS | 30.0% | |
| !!! | AGTATTTTTGGAGCCTTTTT+AGG | - | chr6_4:19414582-19414601 | None:intergenic | 30.0% |
| ! | GATAATCTAGGATATCAATG+TGG | + | chr6_4:19414621-19414640 | Msa0980850:CDS | 30.0% |
| ! | GGAATTTTATTGTATACCAC+TGG | - | chr6_4:19414691-19414710 | None:intergenic | 30.0% |
| AGCTAGTTAAACTTTCAGTT+CGG | - | chr6_4:19414824-19414843 | None:intergenic | 30.0% | |
| CAAGTGCTCAACTAAAAAAA+TGG | + | chr6_4:19415007-19415026 | Msa0980850:intron | 30.0% | |
| TGCTCAACTAAAAAAATGGA+TGG | + | chr6_4:19415011-19415030 | Msa0980850:intron | 30.0% | |
| GCTCAACTAAAAAAATGGAT+GGG | + | chr6_4:19415012-19415031 | Msa0980850:intron | 30.0% | |
| CTCAACTAAAAAAATGGATG+GGG | + | chr6_4:19415013-19415032 | Msa0980850:intron | 30.0% | |
| !!! | CCTGTTTTTTTTTACACAAG+AGG | - | chr6_4:19415186-19415205 | None:intergenic | 30.0% |
| CCTCTTGTGTAAAAAAAAAC+AGG | + | chr6_4:19415183-19415202 | Msa0980850:intron | 30.0% | |
| TGCGTAAAATACACCAAAAA+TGG | + | chr6_4:19415213-19415232 | Msa0980850:intron | 30.0% | |
| GTAAAATACACCAAAAATGG+TGG | + | chr6_4:19415216-19415235 | Msa0980850:intron | 30.0% | |
| ACATTGCTTAACTGATATAC+AGG | + | chr6_4:19415435-19415454 | Msa0980850:intron | 30.0% | |
| ! | CGATTTTTCATATGCAATTG+TGG | + | chr6_4:19415551-19415570 | Msa0980850:CDS | 30.0% |
| AGCTTAAACTTAACAATACC+TGG | + | chr6_4:19415612-19415631 | Msa0980850:CDS | 30.0% | |
| AACTTAACAATACCTGGAAA+TGG | + | chr6_4:19415618-19415637 | Msa0980850:CDS | 30.0% | |
| AGATATGGTTGTATAACAAC+AGG | - | chr6_4:19415708-19415727 | None:intergenic | 30.0% | |
| ! | CCGTCAATTTTGTTAAGATA+TGG | - | chr6_4:19415723-19415742 | None:intergenic | 30.0% |
| !!! | GATGTTTTGTTTGGTGATTA+TGG | + | chr6_4:19415789-19415808 | Msa0980850:CDS | 30.0% |
| ! | TTTGGTGATTATGGATTTAC+TGG | + | chr6_4:19415798-19415817 | Msa0980850:CDS | 30.0% |
| ! | TATGATCCTTTGTTTCCATT+TGG | + | chr6_4:19415885-19415904 | Msa0980850:CDS | 30.0% |
| !!! | AGCATTTTTAGTGTGTTCTT+AGG | + | chr6_4:19415969-19415988 | Msa0980850:intron | 30.0% |
| TACATATCACAATACCAATG+TGG | - | chr6_4:19416037-19416056 | None:intergenic | 30.0% | |
| GTTAAATTGTTAGGGAGAAT+AGG | + | chr6_4:19416144-19416163 | Msa0980850:intron | 30.0% | |
| TAAGTTCGAGAAGGTTAATA+AGG | - | chr6_4:19416207-19416226 | None:intergenic | 30.0% | |
| CTTAAAATGTAAGTTCGAGA+AGG | - | chr6_4:19416216-19416235 | None:intergenic | 30.0% | |
| ACCAATATGTTTCGGTATAT+GGG | - | chr6_4:19416835-19416854 | None:intergenic | 30.0% | |
| AACCAATATGTTTCGGTATA+TGG | - | chr6_4:19416836-19416855 | None:intergenic | 30.0% | |
| AACATAAACTTCTATGGAAG+AGG | - | chr6_4:19416862-19416881 | None:intergenic | 30.0% | |
| !! | GGTTTAAATGAAGGTGTTAA+AGG | - | chr6_4:19416946-19416965 | None:intergenic | 30.0% |
| !! | TGACTTTGAGGTTTAAATGA+AGG | - | chr6_4:19416955-19416974 | None:intergenic | 30.0% |
| GATCCATAAATATGACTTTG+AGG | - | chr6_4:19416967-19416986 | None:intergenic | 30.0% | |
| TGCTCACTTAAAATCAGATT+TGG | - | chr6_4:19417008-19417027 | None:intergenic | 30.0% | |
| !! | ATTTTAAGTGAGCAACACTA+AGG | + | chr6_4:19417014-19417033 | Msa0980850:intron | 30.0% |
| CAACTAATTGAAGTCTTACA+AGG | - | chr6_4:19417085-19417104 | None:intergenic | 30.0% | |
| TAAGACTTCAATTAGTTGAG+TGG | + | chr6_4:19417087-19417106 | Msa0980850:intron | 30.0% | |
| ACCATTTATCACCTAATCAA+AGG | + | chr6_4:19417214-19417233 | Msa0980850:intron | 30.0% | |
| CCATTTATCACCTAATCAAA+GGG | + | chr6_4:19417215-19417234 | Msa0980850:intron | 30.0% | |
| AATAACCTTTCCCTTTGATT+AGG | - | chr6_4:19417228-19417247 | None:intergenic | 30.0% | |
| ATCCTTACAATCCACTTTAA+CGG | + | chr6_4:19417408-19417427 | Msa0980850:intron | 30.0% | |
| ! | TGATCTTCTTCCTTTTGTAA+AGG | - | chr6_4:19417599-19417618 | None:intergenic | 30.0% |
| ACATAACGTAAGTGAGAAAT+CGG | + | chr6_4:19417622-19417641 | Msa0980850:intron | 30.0% | |
| ATGCAAATGAGAAACAAGTA+CGG | + | chr6_4:19417722-19417741 | Msa0980850:intron | 30.0% | |
| ! | CATTCCATGTCTAAAATGAA+AGG | - | chr6_4:19417959-19417978 | None:intergenic | 30.0% |
| !!! | CTTTTTTTGTGTTAACTGTC+TGG | + | chr6_4:19417992-19418011 | Msa0980850:CDS | 30.0% |
| ATCCGACTTTATAGGAAAGT+CGG | + | chr6_4:19410717-19410736 | Msa0980850:intron | 35.0% | |
| ATCCGACTTTCCTATAAAGT+CGG | - | chr6_4:19410722-19410741 | None:intergenic | 35.0% | |
| !! | GGGTCGAAGTTTTTGTTTAT+TGG | + | chr6_4:19410764-19410783 | Msa0980850:intron | 35.0% |
| !! | CAATGTTCTAGAGAAGACAA+GGG | - | chr6_4:19410962-19410981 | None:intergenic | 35.0% |
| !! | ACAATGTTCTAGAGAAGACA+AGG | - | chr6_4:19410963-19410982 | None:intergenic | 35.0% |
| !!! | GTTGTTTTGAGAGGTAGAAA+TGG | + | chr6_4:19411000-19411019 | Msa0980850:intron | 35.0% |
| ! | TCCTTGATTCGAGTATTCAA+TGG | - | chr6_4:19411121-19411140 | None:intergenic | 35.0% |
| GAATCAAGGATCTTATTGAC+AGG | + | chr6_4:19411131-19411150 | Msa0980850:CDS | 35.0% | |
| TCTTATTGACAGGATGACTT+TGG | + | chr6_4:19411141-19411160 | Msa0980850:CDS | 35.0% | |
| TGAGCTGAAAAATGCACATA+AGG | + | chr6_4:19411306-19411325 | Msa0980850:intron | 35.0% | |
| !! | AAAAGGGTGCTTTATCAACT+AGG | + | chr6_4:19411705-19411724 | Msa0980850:CDS | 35.0% |
| CTTGGAATTCCAATGATCTA+TGG | + | chr6_4:19411728-19411747 | Msa0980850:CDS | 35.0% | |
| GCATCAATTCCATAGATCAT+TGG | - | chr6_4:19411740-19411759 | None:intergenic | 35.0% | |
| TATGGAATTGATGCTGTTCA+TGG | + | chr6_4:19411746-19411765 | Msa0980850:CDS | 35.0% | |
| !! | TTTCCTCACAATGTTGGTTT+AGG | + | chr6_4:19411797-19411816 | Msa0980850:CDS | 35.0% |
| GACAAATTCGAGGATCAAAT+TGG | + | chr6_4:19412385-19412404 | Msa0980850:intron | 35.0% | |
| CAATCTTCTTCACTAGTTGA+GGG | - | chr6_4:19412573-19412592 | None:intergenic | 35.0% | |
| AATGGTGTTCCATATGTTGT+TGG | + | chr6_4:19413021-19413040 | Msa0980850:CDS | 35.0% | |
| GATAAAATCTGTCCAAGTGT+TGG | + | chr6_4:19413331-19413350 | Msa0980850:intron | 35.0% | |
| CAAAATCAAACACCAACACT+TGG | - | chr6_4:19413346-19413365 | None:intergenic | 35.0% | |
| AACAACAAAAGGAATCACTG+AGG | + | chr6_4:19413430-19413449 | Msa0980850:CDS | 35.0% | |
| ATGATCGAGTTATAGTAAGC+TGG | - | chr6_4:19413500-19413519 | None:intergenic | 35.0% | |
| ! | GGTAAAGTATTACCCTGAAA+CGG | - | chr6_4:19413622-19413641 | None:intergenic | 35.0% |
| !! | AGGGTTTTGTCATATCAGAT+TGG | + | chr6_4:19413859-19413878 | Msa0980850:intron | 35.0% |
| !! | GGGTTTTGTCATATCAGATT+GGG | + | chr6_4:19413860-19413879 | Msa0980850:intron | 35.0% |
| ! | TTTTGTCATATCAGATTGGG+AGG | + | chr6_4:19413863-19413882 | Msa0980850:CDS | 35.0% |
| TTTGTCATATCAGATTGGGA+GGG | + | chr6_4:19413864-19413883 | Msa0980850:CDS | 35.0% | |
| GAAAATGTGTAGTTAGCATG+AGG | - | chr6_4:19413912-19413931 | None:intergenic | 35.0% | |
| GGAATTGAACTCGATATTCT+AGG | + | chr6_4:19414027-19414046 | Msa0980850:intron | 35.0% | |
| CATTACCTGCATCATTACAA+GGG | - | chr6_4:19414161-19414180 | None:intergenic | 35.0% | |
| TCATTACCTGCATCATTACA+AGG | - | chr6_4:19414162-19414181 | None:intergenic | 35.0% | |
| !! | GGCATTCTTTTTCACTAGTA+AGG | - | chr6_4:19414221-19414240 | None:intergenic | 35.0% |
| GCATCATCAATTCTACTCAT+AGG | - | chr6_4:19414247-19414266 | None:intergenic | 35.0% | |
| GGGCTTATTTGAAAATCCAT+TGG | + | chr6_4:19414300-19414319 | Msa0980850:CDS | 35.0% | |
| CAGCTCGGAGTTTATTAATT+TGG | + | chr6_4:19414368-19414387 | Msa0980850:intron | 35.0% | |
| !! | GTTTGTTGTCATAACTTGAC+AGG | + | chr6_4:19414467-19414486 | Msa0980850:intron | 35.0% |
| ! | AATCTAGGATATCAATGTGG+TGG | + | chr6_4:19414624-19414643 | Msa0980850:CDS | 35.0% |
| ACTTGAATGACCCTTAACTA+CGG | + | chr6_4:19414847-19414866 | Msa0980850:intron | 35.0% | |
| AAAGACCAAACCGTAGTTAA+GGG | - | chr6_4:19414860-19414879 | None:intergenic | 35.0% | |
| AAAAGACCAAACCGTAGTTA+AGG | - | chr6_4:19414861-19414880 | None:intergenic | 35.0% | |
| TCAATGATTAAAAACCGGAC+CGG | - | chr6_4:19414966-19414985 | None:intergenic | 35.0% | |
| !!! | AGTTGAGCACTTGTTTTTTG+AGG | - | chr6_4:19415000-19415019 | None:intergenic | 35.0% |
| ! | TAGCTGCCATTTGACAAAAA+GGG | - | chr6_4:19415292-19415311 | None:intergenic | 35.0% |
| ! | ATAGCTGCCATTTGACAAAA+AGG | - | chr6_4:19415293-19415312 | None:intergenic | 35.0% |
| TCATATGCAATTGTGGTAGT+TGG | + | chr6_4:19415558-19415577 | Msa0980850:CDS | 35.0% | |
| ACACCATATGCTGAAACAAA+TGG | + | chr6_4:19415585-19415604 | Msa0980850:CDS | 35.0% | |
| TCACCATTTGTTTCAGCATA+TGG | - | chr6_4:19415591-19415610 | None:intergenic | 35.0% | |
| ATCGTTTCATATCCATTTCC+AGG | - | chr6_4:19415633-19415652 | None:intergenic | 35.0% | |
| ACGATAAACAATGTATGCAG+CGG | + | chr6_4:19415648-19415667 | Msa0980850:CDS | 35.0% | |
| GATTTACTGGTAAACTTCCA+AGG | + | chr6_4:19415811-19415830 | Msa0980850:CDS | 35.0% | |
| TGAGAATCACCAACATTCAT+TGG | - | chr6_4:19415864-19415883 | None:intergenic | 35.0% | |
| CCAAATCCAAATGGAAACAA+AGG | - | chr6_4:19415894-19415913 | None:intergenic | 35.0% | |
| ! | CCTTTGTTTCCATTTGGATT+TGG | + | chr6_4:19415891-19415910 | Msa0980850:CDS | 35.0% |
| GTTGTAAGACCAAATCCAAA+TGG | - | chr6_4:19415903-19415922 | None:intergenic | 35.0% | |
| TTTAGATGTTGGTACCACAT+TGG | + | chr6_4:19416020-19416039 | Msa0980850:intron | 35.0% | |
| TGCTTAGATTGTGATCTTAC+CGG | + | chr6_4:19416355-19416374 | Msa0980850:intron | 35.0% | |
| !! | TGATCTTGATGGTTTTTGAC+TGG | + | chr6_4:19416423-19416442 | Msa0980850:intron | 35.0% |
| ACAAGGTAAAAGACCCAATA+AGG | - | chr6_4:19416572-19416591 | None:intergenic | 35.0% | |
| ACACATGTAAGTTAGGTTAG+AGG | + | chr6_4:19416617-19416636 | Msa0980850:intron | 35.0% | |
| ATCATTGGATCCATCATGAA+TGG | + | chr6_4:19416645-19416664 | Msa0980850:intron | 35.0% | |
| AATGGTCTAGATCCTTCTAA+TGG | + | chr6_4:19416663-19416682 | Msa0980850:intron | 35.0% | |
| ATGGTCTAGATCCTTCTAAT+GGG | + | chr6_4:19416664-19416683 | Msa0980850:intron | 35.0% | |
| CAGAATAATGACCCATTAGA+AGG | - | chr6_4:19416678-19416697 | None:intergenic | 35.0% | |
| ! | CTTCTAATGGGTCATTATTC+TGG | + | chr6_4:19416676-19416695 | Msa0980850:intron | 35.0% |
| ! | AATGGGTCATTATTCTGGTT+CGG | + | chr6_4:19416681-19416700 | Msa0980850:intron | 35.0% |
| GAGGATGAACCAATATGTTT+CGG | - | chr6_4:19416843-19416862 | None:intergenic | 35.0% | |
| TAGGGGAACATAAACTTCTA+TGG | - | chr6_4:19416868-19416887 | None:intergenic | 35.0% | |
| TTCATCAGCAATGCATATAG+GGG | - | chr6_4:19416885-19416904 | None:intergenic | 35.0% | |
| CTTCATCAGCAATGCATATA+GGG | - | chr6_4:19416886-19416905 | None:intergenic | 35.0% | |
| CTATATGCATTGCTGATGAA+GGG | + | chr6_4:19416885-19416904 | Msa0980850:intron | 35.0% | |
| TATGGATCCAATATGAGCTA+TGG | + | chr6_4:19416979-19416998 | Msa0980850:intron | 35.0% | |
| TTGGAAACCATAGCTCATAT+TGG | - | chr6_4:19416989-19417008 | None:intergenic | 35.0% | |
| CCCTTTGATTAGGTGATAAA+TGG | - | chr6_4:19417218-19417237 | None:intergenic | 35.0% | |
| TATCACCTAATCAAAGGGAA+AGG | + | chr6_4:19417220-19417239 | Msa0980850:intron | 35.0% | |
| GTTATTCACATAAACCCACT+TGG | + | chr6_4:19417242-19417261 | Msa0980850:intron | 35.0% | |
| ATCTCAAGTTCGATTATCTC+TGG | + | chr6_4:19417314-19417333 | Msa0980850:intron | 35.0% | |
| ! | ATCTCTGGTGTCAATTTCAA+TGG | + | chr6_4:19417329-19417348 | Msa0980850:intron | 35.0% |
| ATAATCTGGTTGAGCTATGA+GGG | - | chr6_4:19417390-19417409 | None:intergenic | 35.0% | |
| !! | AGTGGATTGTAAGGATAATC+TGG | - | chr6_4:19417404-19417423 | None:intergenic | 35.0% |
| TAACAGTTAGTCCGTTAAAG+TGG | - | chr6_4:19417422-19417441 | None:intergenic | 35.0% | |
| !! | TAACGGACTAACTGTTAACT+TGG | + | chr6_4:19417425-19417444 | Msa0980850:intron | 35.0% |
| AAATAATGTCCCCTCATAGT+TGG | + | chr6_4:19417464-19417483 | Msa0980850:intron | 35.0% | |
| ACGAATGTTACCAACTATGA+GGG | - | chr6_4:19417477-19417496 | None:intergenic | 35.0% | |
| ATCAGGTAGAGACAACTTAT+TGG | - | chr6_4:19417680-19417699 | None:intergenic | 35.0% | |
| TGCAAATGAGAAACAAGTAC+GGG | + | chr6_4:19417723-19417742 | Msa0980850:intron | 35.0% | |
| ! | TTCTAGAGGAATTAGGCAAA+TGG | - | chr6_4:19417758-19417777 | None:intergenic | 35.0% |
| ATTTGCCTAATTCCTCTAGA+AGG | + | chr6_4:19417757-19417776 | Msa0980850:intron | 35.0% | |
| ! | TCTATCCTTCTAGAGGAATT+AGG | - | chr6_4:19417765-19417784 | None:intergenic | 35.0% |
| AAGTCTTTCTATCCTTCTAG+AGG | - | chr6_4:19417772-19417791 | None:intergenic | 35.0% | |
| TCGTACAAAATCATGTGGAA+TGG | - | chr6_4:19417805-19417824 | None:intergenic | 35.0% | |
| ! | TTCCACATGATTTTGTACGA+TGG | + | chr6_4:19417805-19417824 | Msa0980850:intron | 35.0% |
| GAGATGCAATGATGAATGAT+AGG | + | chr6_4:19417832-19417851 | Msa0980850:intron | 35.0% | |
| ACACAAAAAAAGAGCCTAGA+CGG | - | chr6_4:19417984-19418003 | None:intergenic | 35.0% | |
| GACAATGGTAATTCAGAGTT+TGG | + | chr6_4:19418030-19418049 | Msa0980850:CDS | 35.0% | |
| !!! | ACTTCATTTTGATTCCTAGG+TGG | - | chr6_4:19418090-19418109 | None:intergenic | 35.0% |
| TTCTGAACAATTCGTCCTTT+AGG | + | chr6_4:19418112-19418131 | Msa0980850:CDS | 35.0% | |
| TTGGAACAGCATAAACAAGT+AGG | + | chr6_4:19418141-19418160 | Msa0980850:CDS | 35.0% | |
| CTATAAAGTCGGATAGATGC+AGG | - | chr6_4:19410711-19410730 | None:intergenic | 40.0% | |
| CTGCATCTATCCGACTTTAT+AGG | + | chr6_4:19410709-19410728 | Msa0980850:intron | 40.0% | |
| ACAAAAACTTCGACCCTCAA+CGG | - | chr6_4:19410760-19410779 | None:intergenic | 40.0% | |
| TGAGAGGTAGAAATGGTCAA+AGG | + | chr6_4:19411007-19411026 | Msa0980850:exon | 40.0% | |
| ! | AAAGGTGCAATCTCTTTGGT+GGG | + | chr6_4:19411025-19411044 | Msa0980850:CDS | 40.0% |
| GCCATTGAATACTCGAATCA+AGG | + | chr6_4:19411117-19411136 | Msa0980850:CDS | 40.0% | |
| GGAAGAGAAAATTGGTCAGA+TGG | + | chr6_4:19411162-19411181 | Msa0980850:CDS | 40.0% | |
| !! | TTCGGCCATTGATTTGAAGT+CGG | + | chr6_4:19411441-19411460 | Msa0980850:intron | 40.0% |
| ACTGTCCGACTTCAAATCAA+TGG | - | chr6_4:19411449-19411468 | None:intergenic | 40.0% | |
| !!! | ATAGGGAGTGTTTTAAGTGG+TGG | + | chr6_4:19411620-19411639 | Msa0980850:intron | 40.0% |
| !! | ATGTTGGTTTAGGAGCTACA+AGG | + | chr6_4:19411807-19411826 | Msa0980850:CDS | 40.0% |
| AACGTGCTTTCATGTTGTCT+AGG | + | chr6_4:19412036-19412055 | Msa0980850:intron | 40.0% | |
| ACGTGCTTTCATGTTGTCTA+GGG | + | chr6_4:19412037-19412056 | Msa0980850:intron | 40.0% | |
| ATGTTGCCAGAGACAACAAA+TGG | - | chr6_4:19412427-19412446 | None:intergenic | 40.0% | |
| CCAATCTTCTTCACTAGTTG+AGG | - | chr6_4:19412574-19412593 | None:intergenic | 40.0% | |
| CCTCAACTAGTGAAGAAGAT+TGG | + | chr6_4:19412571-19412590 | Msa0980850:CDS | 40.0% | |
| ATGCAAGGTGCAAAGACATA+GGG | - | chr6_4:19412634-19412653 | None:intergenic | 40.0% | |
| ATCTAAATTACCGCGATGCA+AGG | - | chr6_4:19412649-19412668 | None:intergenic | 40.0% | |
| TCATAACATCTACCCCATCT+TGG | - | chr6_4:19412916-19412935 | None:intergenic | 40.0% | |
| GAATGATCTCAGTCATAGCT+TGG | - | chr6_4:19412966-19412985 | None:intergenic | 40.0% | |
| CACCATTTGACCAATTTGCA+GGG | - | chr6_4:19413008-19413027 | None:intergenic | 40.0% | |
| ACACCATTTGACCAATTTGC+AGG | - | chr6_4:19413009-19413028 | None:intergenic | 40.0% | |
| AGGAAACCGAACTATTGGAT+AGG | - | chr6_4:19413093-19413112 | None:intergenic | 40.0% | |
| TTGGAAGGAAACCGAACTAT+TGG | - | chr6_4:19413098-19413117 | None:intergenic | 40.0% | |
| !!! | ATTCGTGTTTCGGTTTTGGA+AGG | - | chr6_4:19413113-19413132 | None:intergenic | 40.0% |
| ! | GACTATTCGTGTTTCGGTTT+TGG | - | chr6_4:19413117-19413136 | None:intergenic | 40.0% |
| AAGCAGGACTATTCGTGTTT+CGG | - | chr6_4:19413123-19413142 | None:intergenic | 40.0% | |
| ATGTGTAGTTAGCATGAGGA+GGG | - | chr6_4:19413908-19413927 | None:intergenic | 40.0% | |
| AATGTGTAGTTAGCATGAGG+AGG | - | chr6_4:19413909-19413928 | None:intergenic | 40.0% | |
| CAGGATTTAGTGCAAATGGT+TGG | - | chr6_4:19414080-19414099 | None:intergenic | 40.0% | |
| CAACCATTTGCACTAAATCC+TGG | + | chr6_4:19414078-19414097 | Msa0980850:intron | 40.0% | |
| TAAGACTAATCAACACCACC+AGG | - | chr6_4:19414099-19414118 | None:intergenic | 40.0% | |
| ACTTACCCTTGTAATGATGC+AGG | + | chr6_4:19414153-19414172 | Msa0980850:intron | 40.0% | |
| ! | TCATAACTTGACAGGAGCAT+AGG | + | chr6_4:19414475-19414494 | Msa0980850:intron | 40.0% |
| ! | CATAACTTGACAGGAGCATA+GGG | + | chr6_4:19414476-19414495 | Msa0980850:intron | 40.0% |
| GGAAGCTGTTAGGAAATCAT+TGG | + | chr6_4:19414509-19414528 | Msa0980850:CDS | 40.0% | |
| !! | TTTGGAGCCTTTTTAGGAAG+AGG | - | chr6_4:19414576-19414595 | None:intergenic | 40.0% |
| ! | GGCTCCAAAAATACTTGTTG+CGG | + | chr6_4:19414587-19414606 | Msa0980850:CDS | 40.0% |
| ! | GCTCCAAAAATACTTGTTGC+GGG | + | chr6_4:19414588-19414607 | Msa0980850:CDS | 40.0% |
| ! | CTTCCCGCAACAAGTATTTT+TGG | - | chr6_4:19414594-19414613 | None:intergenic | 40.0% |
| GGAAGTCATGCTGATAATCT+AGG | + | chr6_4:19414609-19414628 | Msa0980850:CDS | 40.0% | |
| ! | TAGGATATCAATGTGGTGGA+TGG | + | chr6_4:19414628-19414647 | Msa0980850:CDS | 40.0% |
| ACTTTGTCCTTGCCATTGAA+TGG | - | chr6_4:19414655-19414674 | None:intergenic | 40.0% | |
| ATTCAATGGCAAGGACAAAG+TGG | + | chr6_4:19414654-19414673 | Msa0980850:CDS | 40.0% | |
| AATGACCCTTAACTACGGTT+TGG | + | chr6_4:19414852-19414871 | Msa0980850:intron | 40.0% | |
| !!! | ACTACGGTTTGGTCTTTTGA+CGG | + | chr6_4:19414863-19414882 | Msa0980850:intron | 40.0% |
| ACAGTTGAACCATGATTGAG+AGG | + | chr6_4:19414923-19414942 | Msa0980850:intron | 40.0% | |
| TACCACTTAAGCGTGCATTA+AGG | + | chr6_4:19415042-19415061 | Msa0980850:intron | 40.0% | |
| ! | GCTGCCATTTGACAACATAA+AGG | - | chr6_4:19415084-19415103 | None:intergenic | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr6_4:19415135-19415154 | Msa0980850:intron | 40.0% | |
| AAGGTCACATGTTCAAGTAC+TGG | + | chr6_4:19415154-19415173 | Msa0980850:intron | 40.0% | |
| ! | AGCTGCCATTTGACAAAAAG+GGG | - | chr6_4:19415291-19415310 | None:intergenic | 40.0% |
| TTGTCAAATGGCAGCTATAG+CGG | + | chr6_4:19415295-19415314 | Msa0980850:intron | 40.0% | |
| AGAAACCAAGGTAGTCTATG+AGG | + | chr6_4:19415497-19415516 | Msa0980850:CDS | 40.0% | |
| ATTCTCCTCATAGACTACCT+TGG | - | chr6_4:19415505-19415524 | None:intergenic | 40.0% | |
| ! | TGTGTCGTTGTGTTAATCAC+TGG | + | chr6_4:19415678-19415697 | Msa0980850:CDS | 40.0% |
| !!! | GGTGTTGCTGATGTTTTGTT+TGG | + | chr6_4:19415780-19415799 | Msa0980850:CDS | 40.0% |
| ACAGTCTTAAACCATGTCCT+TGG | - | chr6_4:19415831-19415850 | None:intergenic | 40.0% | |
| GATCAGTTGCCAATGAATGT+TGG | + | chr6_4:19415852-19415871 | Msa0980850:CDS | 40.0% | |
| GTTCGAGAAGGTTAATAAGG+AGG | - | chr6_4:19416204-19416223 | None:intergenic | 40.0% | |
| GATTGTGATCTTACCGGATT+TGG | + | chr6_4:19416361-19416380 | Msa0980850:intron | 40.0% | |
| AGGTGAGATTGTGATCTTGA+TGG | + | chr6_4:19416412-19416431 | Msa0980850:intron | 40.0% | |
| !! | TTTTTGACTGGATCTCTCGA+AGG | + | chr6_4:19416435-19416454 | Msa0980850:intron | 40.0% |
| GTATGTGAATGAGAGAAGAG+AGG | + | chr6_4:19416504-19416523 | Msa0980850:intron | 40.0% | |
| TAGAAGAGAGATACCTTGTG+AGG | + | chr6_4:19416534-19416553 | Msa0980850:intron | 40.0% | |
| TCAAGGGACACATGTAAGTT+AGG | + | chr6_4:19416610-19416629 | Msa0980850:intron | 40.0% | |
| AGGTTAGAGGAAGTCATCAT+TGG | + | chr6_4:19416630-19416649 | Msa0980850:intron | 40.0% | |
| AGGATCTAGACCATTCATGA+TGG | - | chr6_4:19416658-19416677 | None:intergenic | 40.0% | |
| !! | ATTATTCTGGTTCGGAGCAT+TGG | + | chr6_4:19416689-19416708 | Msa0980850:intron | 40.0% |
| TGAAAAACCAAACAGGTCCA+TGG | - | chr6_4:19416720-19416739 | None:intergenic | 40.0% | |
| !!! | CCTGTTTGGTTTTTCACCTT+CGG | + | chr6_4:19416724-19416743 | Msa0980850:intron | 40.0% |
| TTCTCACACTATGGGTTCAT+GGG | - | chr6_4:19416779-19416798 | None:intergenic | 40.0% | |
| ATATGTTTCGGTATATGGGC+TGG | - | chr6_4:19416831-19416850 | None:intergenic | 40.0% | |
| GCCCATATACCGAAACATAT+TGG | + | chr6_4:19416831-19416850 | Msa0980850:intron | 40.0% | |
| CCTTCATCAGCAATGCATAT+AGG | - | chr6_4:19416887-19416906 | None:intergenic | 40.0% | |
| CCTATATGCATTGCTGATGA+AGG | + | chr6_4:19416884-19416903 | Msa0980850:intron | 40.0% | |
| AAATTGTGCACCAATGTACC+TGG | + | chr6_4:19417165-19417184 | Msa0980850:intron | 40.0% | |
| CTCAATTTCCTGTTTCATCC+AGG | - | chr6_4:19417186-19417205 | None:intergenic | 40.0% | |
| GAAACAGGAAATTGAGCACA+AGG | + | chr6_4:19417190-19417209 | Msa0980850:intron | 40.0% | |
| TCACATAAACCCACTTGGAT+TGG | + | chr6_4:19417247-19417266 | Msa0980850:intron | 40.0% | |
| ACCAACAAACCAATCCAAGT+GGG | - | chr6_4:19417259-19417278 | None:intergenic | 40.0% | |
| !! | TTGGATTGGTTTGTTGGTGT+TGG | + | chr6_4:19417261-19417280 | Msa0980850:intron | 40.0% |
| !! | TGGTTTGTTGGTGTTGGTTT+AGG | + | chr6_4:19417267-19417286 | Msa0980850:intron | 40.0% |
| !! | TTGGTGTTGGTTTAGGACAT+TGG | + | chr6_4:19417274-19417293 | Msa0980850:intron | 40.0% |
| GATAATCTGGTTGAGCTATG+AGG | - | chr6_4:19417391-19417410 | None:intergenic | 40.0% | |
| !! | GTCCGTTAAAGTGGATTGTA+AGG | - | chr6_4:19417413-19417432 | None:intergenic | 40.0% |
| CGAATGTTACCAACTATGAG+GGG | - | chr6_4:19417476-19417495 | None:intergenic | 40.0% | |
| CACGAATGTTACCAACTATG+AGG | - | chr6_4:19417478-19417497 | None:intergenic | 40.0% | |
| !! | CTCATAGTTGGTAACATTCG+TGG | + | chr6_4:19417476-19417495 | Msa0980850:intron | 40.0% |
| TGATCTCTTCTGCCAAACTT+CGG | - | chr6_4:19417539-19417558 | None:intergenic | 40.0% | |
| TCAATGGAGGCCTTTACAAA+AGG | + | chr6_4:19417586-19417605 | Msa0980850:CDS | 40.0% | |
| TAACGTAAGTGAGAAATCGG+AGG | + | chr6_4:19417625-19417644 | Msa0980850:intron | 40.0% | |
| AACGTAAGTGAGAAATCGGA+GGG | + | chr6_4:19417626-19417645 | Msa0980850:intron | 40.0% | |
| CATGAAGAGACTCACATCAT+AGG | - | chr6_4:19417705-19417724 | None:intergenic | 40.0% | |
| GCAAATGAGAAACAAGTACG+GGG | + | chr6_4:19417724-19417743 | Msa0980850:intron | 40.0% | |
| CTCCATCGTACAAAATCATG+TGG | - | chr6_4:19417810-19417829 | None:intergenic | 40.0% | |
| ATGGTAATTCAGAGTTTGGC+CGG | + | chr6_4:19418034-19418053 | Msa0980850:CDS | 40.0% | |
| GCCAGACTTTACTTATATCC+CGG | - | chr6_4:19418056-19418075 | None:intergenic | 40.0% | |
| TTCCTAGGTGGAACAATTCT+TGG | - | chr6_4:19418078-19418097 | None:intergenic | 40.0% | |
| TTCGTCCTTTAGGCTATGTT+TGG | + | chr6_4:19418122-19418141 | Msa0980850:CDS | 40.0% | |
| CTGTTCCAAACATAGCCTAA+AGG | - | chr6_4:19418130-19418149 | None:intergenic | 40.0% | |
| ATGTGGCGCTACAATGTTAC+AGG | - | chr6_4:19410505-19410524 | None:intergenic | 45.0% | |
| TACAATAAAGCCGACCGTTG+AGG | + | chr6_4:19410743-19410762 | Msa0980850:intron | 45.0% | |
| ACAATAAAGCCGACCGTTGA+GGG | + | chr6_4:19410744-19410763 | Msa0980850:intron | 45.0% | |
| ! | GGTCAAAGGTGCAATCTCTT+TGG | + | chr6_4:19411021-19411040 | Msa0980850:CDS | 45.0% |
| ! | CAAAGGTGCAATCTCTTTGG+TGG | + | chr6_4:19411024-19411043 | Msa0980850:CDS | 45.0% |
| AAGGTGCAATCTCTTTGGTG+GGG | + | chr6_4:19411026-19411045 | Msa0980850:CDS | 45.0% | |
| GCTAGTGCTCTTCCATTGTT+GGG | + | chr6_4:19411048-19411067 | Msa0980850:CDS | 45.0% | |
| CTTCCATTGTTGGGTAGCAA+TGG | + | chr6_4:19411057-19411076 | Msa0980850:CDS | 45.0% | |
| CGAGTATTCAATGGCTGCTT+TGG | - | chr6_4:19411112-19411131 | None:intergenic | 45.0% | |
| !! | AGGAAGTGTTCCTAAACCAG+AGG | + | chr6_4:19411643-19411662 | Msa0980850:CDS | 45.0% |
| ! | TTTGCAGTAGCCTCTGGTTT+AGG | - | chr6_4:19411656-19411675 | None:intergenic | 45.0% |
| TAAACCAGAGGCTACTGCAA+AGG | + | chr6_4:19411655-19411674 | Msa0980850:CDS | 45.0% | |
| AGAGGCTACTGCAAAGGATT+GGG | + | chr6_4:19411661-19411680 | Msa0980850:CDS | 45.0% | |
| GGTGCTTTATCAACTAGGCT+TGG | + | chr6_4:19411710-19411729 | Msa0980850:CDS | 45.0% | |
| GCTCCTAAACCAACATTGTG+AGG | - | chr6_4:19411803-19411822 | None:intergenic | 45.0% | |
| GCTTTCATGTTGTCTAGGGA+AGG | + | chr6_4:19412041-19412060 | Msa0980850:intron | 45.0% | |
| !! | ACCACACCATTTGTTGTCTC+TGG | + | chr6_4:19412418-19412437 | Msa0980850:intron | 45.0% |
| ! | AGTTGCTCTGGATTCAAGAG+CGG | - | chr6_4:19412605-19412624 | None:intergenic | 45.0% |
| ATAGGGAATTCCAGTTGCTC+TGG | - | chr6_4:19412617-19412636 | None:intergenic | 45.0% | |
| GATGCAAGGTGCAAAGACAT+AGG | - | chr6_4:19412635-19412654 | None:intergenic | 45.0% | |
| CTACGATTGACAAAGAGGTG+AGG | - | chr6_4:19412685-19412704 | None:intergenic | 45.0% | |
| AGGTGTGTAGAGATCCAAGA+TGG | + | chr6_4:19412899-19412918 | Msa0980850:intron | 45.0% | |
| GGTGTGTAGAGATCCAAGAT+GGG | + | chr6_4:19412900-19412919 | Msa0980850:intron | 45.0% | |
| GTGTGTAGAGATCCAAGATG+GGG | + | chr6_4:19412901-19412920 | Msa0980850:CDS | 45.0% | |
| GCTATGACTGAGATCATTCC+AGG | + | chr6_4:19412967-19412986 | Msa0980850:CDS | 45.0% | |
| GAGATCATTCCAGGACTACA+AGG | + | chr6_4:19412976-19412995 | Msa0980850:CDS | 45.0% | |
| CATTTGACCAATTTGCAGGG+AGG | - | chr6_4:19413005-19413024 | None:intergenic | 45.0% | |
| CTCCCTGCAAATTGGTCAAA+TGG | + | chr6_4:19413003-19413022 | Msa0980850:CDS | 45.0% | |
| ! | TGCAACTTTCTTGCTGTGCA+AGG | - | chr6_4:19413378-19413397 | None:intergenic | 45.0% |
| GCTTGTGCTAAGCACTTTGT+TGG | + | chr6_4:19413398-19413417 | Msa0980850:CDS | 45.0% | |
| ! | GCTAAGCACTTTGTTGGTGA+TGG | + | chr6_4:19413404-19413423 | Msa0980850:CDS | 45.0% |
| !! | AAGCACTTTGTTGGTGATGG+TGG | + | chr6_4:19413407-19413426 | Msa0980850:CDS | 45.0% |
| !! | GGTGATGGTGGAACAACAAA+AGG | + | chr6_4:19413419-19413438 | Msa0980850:CDS | 45.0% |
| !! | TAAGGGTGTCTTAACCGTCA+TGG | + | chr6_4:19413520-19413539 | Msa0980850:CDS | 45.0% |
| GCTTGAGTATGAGACCATGA+CGG | - | chr6_4:19413537-19413556 | None:intergenic | 45.0% | |
| TCATGGTCTCATACTCAAGC+TGG | + | chr6_4:19413537-19413556 | Msa0980850:CDS | 45.0% | |
| GTCTCATACTCAAGCTGGAA+TGG | + | chr6_4:19413542-19413561 | Msa0980850:CDS | 45.0% | |
| GCTAATCGCGATTTAGTCAC+TGG | + | chr6_4:19413578-19413597 | Msa0980850:CDS | 45.0% | |
| TCAAAAACACGCTCCGTTTC+AGG | + | chr6_4:19413606-19413625 | Msa0980850:CDS | 45.0% | |
| CAAAAACACGCTCCGTTTCA+GGG | + | chr6_4:19413607-19413626 | Msa0980850:CDS | 45.0% | |
| TGTGTAGTTAGCATGAGGAG+GGG | - | chr6_4:19413907-19413926 | None:intergenic | 45.0% | |
| !! | AGTGAATGCCGGTATTGACA+TGG | + | chr6_4:19413944-19413963 | Msa0980850:CDS | 45.0% |
| CCACCAGGATTTAGTGCAAA+TGG | - | chr6_4:19414084-19414103 | None:intergenic | 45.0% | |
| CCATTTGCACTAAATCCTGG+TGG | + | chr6_4:19414081-19414100 | Msa0980850:intron | 45.0% | |
| ! | TTGACAGGAGCATAGGGAAT+TGG | + | chr6_4:19414482-19414501 | Msa0980850:intron | 45.0% |
| AATTGGCTAGGGAAGCTGTT+AGG | + | chr6_4:19414499-19414518 | Msa0980850:CDS | 45.0% | |
| ! | GTCTTTTGACGGTTCGAATC+TGG | + | chr6_4:19414874-19414893 | Msa0980850:intron | 45.0% |
| CTCCTTAATGCACGCTTAAG+TGG | - | chr6_4:19415047-19415066 | None:intergenic | 45.0% | |
| CACTTAAGCGTGCATTAAGG+AGG | + | chr6_4:19415045-19415064 | Msa0980850:intron | 45.0% | |
| TTGTCAAATGGCAGCTGTGA+GGG | + | chr6_4:19415089-19415108 | Msa0980850:intron | 45.0% | |
| CAACTTTACCAGTTGCACCA+AGG | - | chr6_4:19415119-19415138 | None:intergenic | 45.0% | |
| CATACGCATGGTATAGGAAG+GGG | - | chr6_4:19415244-19415263 | None:intergenic | 45.0% | |
| GCATACGCATGGTATAGGAA+GGG | - | chr6_4:19415245-19415264 | None:intergenic | 45.0% | |
| CTTCCTATACCATGCGTATG+CGG | + | chr6_4:19415244-19415263 | Msa0980850:intron | 45.0% | |
| TTCCTATACCATGCGTATGC+GGG | + | chr6_4:19415245-19415264 | Msa0980850:intron | 45.0% | |
| TTTGACAAAAAGGGGCAACC+CGG | - | chr6_4:19415283-19415302 | None:intergenic | 45.0% | |
| ! | GGTTGCCCCTTTTTGTCAAA+TGG | + | chr6_4:19415283-19415302 | Msa0980850:intron | 45.0% |
| ! | ATAGCGGCGCTATAGCATTT+TGG | + | chr6_4:19415311-19415330 | Msa0980850:intron | 45.0% |
| CTGGTAAACTTCCAAGGACA+TGG | + | chr6_4:19415817-19415836 | Msa0980850:CDS | 45.0% | |
| CTTCTAGATCTCGCCAAATC+CGG | - | chr6_4:19416377-19416396 | None:intergenic | 45.0% | |
| TCTAGAAGACGATGAACCGT+TGG | + | chr6_4:19416389-19416408 | Msa0980850:intron | 45.0% | |
| GATCACAATCTCACCTCCAA+CGG | - | chr6_4:19416408-19416427 | None:intergenic | 45.0% | |
| ATCTCTCGAAGGAACGAAGA+GGG | + | chr6_4:19416446-19416465 | Msa0980850:intron | 45.0% | |
| TTGAGTGTATGAGCATGTGC+AGG | - | chr6_4:19416480-19416499 | None:intergenic | 45.0% | |
| TGAATGAGAGAAGAGAGGCT+TGG | + | chr6_4:19416509-19416528 | Msa0980850:intron | 45.0% | |
| GAATGAGAGAAGAGAGGCTT+GGG | + | chr6_4:19416510-19416529 | Msa0980850:intron | 45.0% | |
| AGAGATACCTTGTGAGGTCT+TGG | + | chr6_4:19416540-19416559 | Msa0980850:intron | 45.0% | |
| !! | GTCTTGGTGTTCGCCTTATT+GGG | + | chr6_4:19416556-19416575 | Msa0980850:intron | 45.0% |
| ! | GGGTCTTTTACCTTGTGTAG+TGG | + | chr6_4:19416576-19416595 | Msa0980850:intron | 45.0% |
| AGACATGGATCCACTACACA+AGG | - | chr6_4:19416589-19416608 | None:intergenic | 45.0% | |
| ! | TAGTGGATCCATGTCTCTCA+AGG | + | chr6_4:19416593-19416612 | Msa0980850:intron | 45.0% |
| AGTGGATCCATGTCTCTCAA+GGG | + | chr6_4:19416594-19416613 | Msa0980850:intron | 45.0% | |
| CCGAAGGTGAAAAACCAAAC+AGG | - | chr6_4:19416727-19416746 | None:intergenic | 45.0% | |
| TCTCACACTATGGGTTCATG+GGG | - | chr6_4:19416778-19416797 | None:intergenic | 45.0% | |
| CTTCTCACACTATGGGTTCA+TGG | - | chr6_4:19416780-19416799 | None:intergenic | 45.0% | |
| CACAAGGCTTCTCACACTAT+GGG | - | chr6_4:19416787-19416806 | None:intergenic | 45.0% | |
| ! | AGCCTTGTGGAACATATGTG+CGG | + | chr6_4:19416798-19416817 | Msa0980850:intron | 45.0% |
| AACCGCACATATGTTCCACA+AGG | - | chr6_4:19416803-19416822 | None:intergenic | 45.0% | |
| TGTGGAACATATGTGCGGTT+AGG | + | chr6_4:19416803-19416822 | Msa0980850:intron | 45.0% | |
| TGCATTGCTGATGAAGGGTT+TGG | + | chr6_4:19416890-19416909 | Msa0980850:intron | 45.0% | |
| GCATTGCTGATGAAGGGTTT+GGG | + | chr6_4:19416891-19416910 | Msa0980850:intron | 45.0% | |
| CCTGTTTCATCCAGGTACAT+TGG | - | chr6_4:19417178-19417197 | None:intergenic | 45.0% | |
| CCAATGTACCTGGATGAAAC+AGG | + | chr6_4:19417175-19417194 | Msa0980850:intron | 45.0% | |
| !! | ACCCACTTGGATTGGTTTGT+TGG | + | chr6_4:19417255-19417274 | Msa0980850:intron | 45.0% |
| CACCAACAAACCAATCCAAG+TGG | - | chr6_4:19417260-19417279 | None:intergenic | 45.0% | |
| ACGTAAGTGAGAAATCGGAG+GGG | + | chr6_4:19417627-19417646 | Msa0980850:intron | 45.0% | |
| CCTATATGTGCTACCAGGTA+TGG | - | chr6_4:19417654-19417673 | None:intergenic | 45.0% | |
| CCATACCTGGTAGCACATAT+AGG | + | chr6_4:19417651-19417670 | Msa0980850:intron | 45.0% | |
| GGATACCTATATGTGCTACC+AGG | - | chr6_4:19417659-19417678 | None:intergenic | 45.0% | |
| GACTCACATCATAGGTGATC+AGG | - | chr6_4:19417697-19417716 | None:intergenic | 45.0% | |
| AGACATGGAATGAACCGTCT+AGG | + | chr6_4:19417967-19417986 | Msa0980850:intron | 45.0% | |
| !! | TGTTAACTGTCTGGCTCTCA+AGG | + | chr6_4:19418001-19418020 | Msa0980850:CDS | 45.0% |
| !! | GTTAACTGTCTGGCTCTCAA+GGG | + | chr6_4:19418002-19418021 | Msa0980850:CDS | 45.0% |
| CTCTCAAGGGAAATGGACAA+TGG | + | chr6_4:19418015-19418034 | Msa0980850:CDS | 45.0% | |
| TGGTAATTCAGAGTTTGGCC+GGG | + | chr6_4:19418035-19418054 | Msa0980850:CDS | 45.0% | |
| GCCGGGATATAAGTAAAGTC+TGG | + | chr6_4:19418052-19418071 | Msa0980850:CDS | 45.0% | |
| !!! | TATTTTCTTAATTTTTTTAT+AGG | + | chr6_4:19411602-19411621 | Msa0980850:intron | 5.0% |
| !!! | ATTTTCTTAATTTTTTTATA+GGG | + | chr6_4:19411603-19411622 | Msa0980850:intron | 5.0% |
| !! | GTAAAAAATAAATAAATATA+CGG | - | chr6_4:19414002-19414021 | None:intergenic | 5.0% |
| !! | ATAATTAATTGATAAAATTT+GGG | - | chr6_4:19417045-19417064 | None:intergenic | 5.0% |
| !! | AATAATTAATTGATAAAATT+TGG | - | chr6_4:19417046-19417065 | None:intergenic | 5.0% |
| !! | ATCAGCAATGGTTGGCTTCG+TGG | + | chr6_4:19410645-19410664 | Msa0980850:intron | 50.0% |
| AAACTTCGACCCTCAACGGT+CGG | - | chr6_4:19410756-19410775 | None:intergenic | 50.0% | |
| GGCTAGTGCTCTTCCATTGT+TGG | + | chr6_4:19411047-19411066 | Msa0980850:CDS | 50.0% | |
| CTGCCATTGCTACCCAACAA+TGG | - | chr6_4:19411063-19411082 | None:intergenic | 50.0% | |
| !!! | GGGAGTGTTTTAAGTGGTGG+AGG | + | chr6_4:19411623-19411642 | Msa0980850:intron | 50.0% |
| CAATCCTTTGCAGTAGCCTC+TGG | - | chr6_4:19411662-19411681 | None:intergenic | 50.0% | |
| CAGAGGCTACTGCAAAGGAT+TGG | + | chr6_4:19411660-19411679 | Msa0980850:CDS | 50.0% | |
| GCCAGAGACAACAAATGGTG+TGG | - | chr6_4:19412422-19412441 | None:intergenic | 50.0% | |
| GTTGAGGGTCCCTGCAATTT+GGG | - | chr6_4:19412558-19412577 | None:intergenic | 50.0% | |
| AGTTGAGGGTCCCTGCAATT+TGG | - | chr6_4:19412559-19412578 | None:intergenic | 50.0% | |
| GCTCTTGAATCCAGAGCAAC+TGG | + | chr6_4:19412604-19412623 | Msa0980850:CDS | 50.0% | |
| TGTCTTTGCACCTTGCATCG+CGG | + | chr6_4:19412636-19412655 | Msa0980850:CDS | 50.0% | |
| AAGGTGACCTCCCTGCAAAT+TGG | + | chr6_4:19412995-19413014 | Msa0980850:CDS | 50.0% | |
| ATTGAAGCCGGAGTGAATGC+CGG | + | chr6_4:19413933-19413952 | Msa0980850:CDS | 50.0% | |
| GTCAATACCGGCATTCACTC+CGG | - | chr6_4:19413943-19413962 | None:intergenic | 50.0% | |
| TACAGCCTTGCCGATCATCT+CGG | + | chr6_4:19414328-19414347 | Msa0980850:CDS | 50.0% | |
| ! | AGGAGCATAGGGAATTGGCT+AGG | + | chr6_4:19414487-19414506 | Msa0980850:intron | 50.0% |
| GGAGCATAGGGAATTGGCTA+GGG | + | chr6_4:19414488-19414507 | Msa0980850:intron | 50.0% | |
| !! | GTGGTGGATGGACCATTCAA+TGG | + | chr6_4:19414640-19414659 | Msa0980850:CDS | 50.0% |
| GGATGGACCATTCAATGGCA+AGG | + | chr6_4:19414645-19414664 | Msa0980850:CDS | 50.0% | |
| AGTGGCAACAACATCACCAG+TGG | + | chr6_4:19414672-19414691 | Msa0980850:CDS | 50.0% | |
| CCAGCAAGACCTCTCAATCA+TGG | - | chr6_4:19414935-19414954 | None:intergenic | 50.0% | |
| CCATGATTGAGAGGTCTTGC+TGG | + | chr6_4:19414932-19414951 | Msa0980850:intron | 50.0% | |
| !! | GGTCTTGCTGGTTCGATATC+CGG | + | chr6_4:19414944-19414963 | Msa0980850:intron | 50.0% |
| GTTGTCAAATGGCAGCTGTG+AGG | + | chr6_4:19415088-19415107 | Msa0980850:intron | 50.0% | |
| TGTCAAATGGCAGCTGTGAG+GGG | + | chr6_4:19415090-19415109 | Msa0980850:intron | 50.0% | |
| CGCATACGCATGGTATAGGA+AGG | - | chr6_4:19415246-19415265 | None:intergenic | 50.0% | |
| CGCAGTCGACAAAGAAACCA+AGG | + | chr6_4:19415485-19415504 | Msa0980850:CDS | 50.0% | |
| ! | CTTCCTGGTAGTGAAGGTTC+TGG | + | chr6_4:19415759-19415778 | Msa0980850:CDS | 50.0% |
| ACACCAGAACCTTCACTACC+AGG | - | chr6_4:19415765-19415784 | None:intergenic | 50.0% | |
| AGAAGACGATGAACCGTTGG+AGG | + | chr6_4:19416392-19416411 | Msa0980850:intron | 50.0% | |
| GATCTCTCGAAGGAACGAAG+AGG | + | chr6_4:19416445-19416464 | Msa0980850:intron | 50.0% | |
| TCTCTCGAAGGAACGAAGAG+GGG | + | chr6_4:19416447-19416466 | Msa0980850:intron | 50.0% | |
| !! | GGTCTTGGTGTTCGCCTTAT+TGG | + | chr6_4:19416555-19416574 | Msa0980850:intron | 50.0% |
| CATGTGTCCCTTGAGAGACA+TGG | - | chr6_4:19416604-19416623 | None:intergenic | 50.0% | |
| CCACAAGGCTTCTCACACTA+TGG | - | chr6_4:19416788-19416807 | None:intergenic | 50.0% | |
| CCATAGTGTGAGAAGCCTTG+TGG | + | chr6_4:19416785-19416804 | Msa0980850:intron | 50.0% | |
| !! | TGTCTGGCTCTCAAGGGAAA+TGG | + | chr6_4:19418008-19418027 | Msa0980850:CDS | 50.0% |
| GGCCAAGAATTGTTCCACCT+AGG | + | chr6_4:19418073-19418092 | Msa0980850:CDS | 50.0% | |
| CAGATTGGGAGGGAATCGAC+AGG | + | chr6_4:19413874-19413893 | Msa0980850:CDS | 55.0% | |
| GCAAGGCTGTAACCAGCCAA+TGG | - | chr6_4:19414319-19414338 | None:intergenic | 55.0% | |
| ACAGCCTTGCCGATCATCTC+GGG | + | chr6_4:19414329-19414348 | Msa0980850:CDS | 55.0% | |
| AACCTGGCTCCCGAGATGAT+CGG | - | chr6_4:19414341-19414360 | None:intergenic | 55.0% | |
| ! | GCCAGGTTAGTCGATCAGCT+CGG | + | chr6_4:19414353-19414372 | Msa0980850:intron | 55.0% |
| TCCGAGCTGATCGACTAACC+TGG | - | chr6_4:19414357-19414376 | None:intergenic | 55.0% | |
| !! | TGCTGGTTCGATATCCGGTC+CGG | + | chr6_4:19414949-19414968 | Msa0980850:intron | 55.0% |
| ! | AGGGGTAACCTTGGTGCAAC+TGG | + | chr6_4:19415108-19415127 | Msa0980850:intron | 55.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | - | chr6_4:19415229-19415248 | None:intergenic | 55.0% |
| CTCCCGCATACGCATGGTAT+AGG | - | chr6_4:19415250-19415269 | None:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+TGG | - | chr6_4:19415256-19415275 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr6_4:19415261-19415280 | Msa0980850:intron | 55.0% |
| !! | TTGACGGACTCGTTGCTGCT+TGG | + | chr6_4:19415736-19415755 | Msa0980850:CDS | 55.0% |
| ! | GCTTGGCTTCCTGGTAGTGA+AGG | + | chr6_4:19415753-19415772 | Msa0980850:CDS | 55.0% |
| GCGAACACCAAGACCTCACA+AGG | - | chr6_4:19416550-19416569 | None:intergenic | 55.0% | |
| !! | TCGGAGCATTGGTGTCACCA+TGG | + | chr6_4:19416700-19416719 | Msa0980850:intron | 55.0% |
| ! | GGTGTCACCATGGACCTGTT+TGG | + | chr6_4:19416710-19416729 | Msa0980850:intron | 55.0% |
| ACTATGGGTTCATGGGGTCG+TGG | - | chr6_4:19416772-19416791 | None:intergenic | 55.0% | |
| GACACAACGAGCGTGCTCAA+TGG | + | chr6_4:19417570-19417589 | Msa0980850:CDS | 55.0% | |
| ACAACGAGCGTGCTCAATGG+AGG | + | chr6_4:19417573-19417592 | Msa0980850:CDS | 55.0% | |
| AAATCGGAGGGGACCATACC+TGG | + | chr6_4:19417638-19417657 | Msa0980850:intron | 55.0% | |
| GGGAGGTCACCTTGTAGTCC+TGG | - | chr6_4:19412988-19413007 | None:intergenic | 60.0% | |
| GCAGCTGTGAGGGGTAACCT+TGG | + | chr6_4:19415099-19415118 | Msa0980850:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr6_4:19415262-19415281 | Msa0980850:intron | 60.0% |
| ! | CTCGTTGCTGCTTGGCTTCC+TGG | + | chr6_4:19415744-19415763 | Msa0980850:CDS | 60.0% |
| GGCACGAACGTGCATGGGAT+GGG | - | chr6_4:19416751-19416770 | None:intergenic | 60.0% | |
| TGGCACGAACGTGCATGGGA+TGG | - | chr6_4:19416752-19416771 | None:intergenic | 60.0% | |
| GTCGTGGCACGAACGTGCAT+GGG | - | chr6_4:19416756-19416775 | None:intergenic | 60.0% | |
| GGCTCCCGAGATGATCGGCA+AGG | - | chr6_4:19414336-19414355 | None:intergenic | 65.0% | |
| TGCCGATCATCTCGGGAGCC+AGG | + | chr6_4:19414336-19414355 | Msa0980850:CDS | 65.0% | |
| CGTGCATGGGATGGGACCGA+AGG | - | chr6_4:19416743-19416762 | None:intergenic | 65.0% | |
| GGTCGTGGCACGAACGTGCA+TGG | - | chr6_4:19416757-19416776 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 19410478 | 19418212 | 19410478 | ID=Msa0980850;Name=Msa0980850 |
| chr6_4 | mRNA | 19410478 | 19418212 | 19410478 | ID=Msa0980850-mRNA-1;Parent=Msa0980850;Name=Msa0980850-mRNA-1;_AED=0.44;_eAED=0.44;_QI=102|0.36|0.16|0.83|0.90|0.83|12|0|741 |
| chr6_4 | exon | 19410478 | 19410561 | 19410478 | ID=Msa0980850-mRNA-1:exon:6056;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19411001 | 19411238 | 19411001 | ID=Msa0980850-mRNA-1:exon:6057;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19411624 | 19411828 | 19411624 | ID=Msa0980850-mRNA-1:exon:6058;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19412567 | 19412657 | 19412567 | ID=Msa0980850-mRNA-1:exon:6059;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19412901 | 19413046 | 19412901 | ID=Msa0980850-mRNA-1:exon:6060;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19413385 | 19413628 | 19413385 | ID=Msa0980850-mRNA-1:exon:6061;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19413861 | 19413965 | 19413861 | ID=Msa0980850-mRNA-1:exon:6062;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19414175 | 19414357 | 19414175 | ID=Msa0980850-mRNA-1:exon:6063;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19414489 | 19414693 | 19414489 | ID=Msa0980850-mRNA-1:exon:6064;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19415457 | 19415952 | 19415457 | ID=Msa0980850-mRNA-1:exon:6065;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19417542 | 19417628 | 19417542 | ID=Msa0980850-mRNA-1:exon:6066;Parent=Msa0980850-mRNA-1 |
| chr6_4 | exon | 19417969 | 19418212 | 19417969 | ID=Msa0980850-mRNA-1:exon:6067;Parent=Msa0980850-mRNA-1 |
| chr6_4 | five_prime_UTR | 19410478 | 19410561 | 19410478 | ID=Msa0980850-mRNA-1:five_prime_utr;Parent=Msa0980850-mRNA-1 |
| chr6_4 | five_prime_UTR | 19411001 | 19411018 | 19411001 | ID=Msa0980850-mRNA-1:five_prime_utr;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19411019 | 19411238 | 19411019 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19411624 | 19411828 | 19411624 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19412567 | 19412657 | 19412567 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19412901 | 19413046 | 19412901 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19413385 | 19413628 | 19413385 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19413861 | 19413965 | 19413861 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19414175 | 19414357 | 19414175 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19414489 | 19414693 | 19414489 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19415457 | 19415952 | 19415457 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19417542 | 19417628 | 19417542 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| chr6_4 | CDS | 19417969 | 19418212 | 19417969 | ID=Msa0980850-mRNA-1:cds;Parent=Msa0980850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
