AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0981450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0981450 MtrunA17_Chr3g0131631 97.216 970 24 2 1 968 1 969 0.0 1936
Msa0981450 MtrunA17_Chr8g0385721 68.589 971 284 13 1 956 1 965 0.0 1275
Msa0981450 MtrunA17_Chr7g0221461 41.809 818 348 26 153 937 79 801 2.30e-170 517
Msa0981450 MtrunA17_Chr2g0304041 43.049 820 336 25 160 913 66 820 6.07e-158 487
Msa0981450 MtrunA17_Chr7g0276301 34.731 668 289 20 170 815 27 569 6.42e-88 292
Msa0981450 MtrunA17_Chr3g0096561 47.605 334 144 7 137 443 46 375 2.59e-74 262
Msa0981450 MtrunA17_Chr3g0096561 53.020 298 120 7 658 944 561 849 5.83e-74 261
Msa0981450 MtrunA17_Chr7g0276291 56.204 137 33 2 824 937 5 137 4.95e-42 150
Msa0981450 MtrunA17_Chr3g0123391 45.890 146 67 1 790 923 333 478 1.89e-34 139
Msa0981450 MtrunA17_Chr3g0123391 28.646 192 112 7 282 451 59 247 5.87e-15 79.0
Msa0981450 MtrunA17_Chr5g0428671 56.637 113 49 0 309 421 1 113 2.60e-34 127
Msa0981450 MtrunA17_Chr5g0423961 55.752 113 50 0 309 421 1 113 2.63e-34 127
Msa0981450 MtrunA17_Chr4g0035711 38.095 126 64 2 793 904 188 313 3.94e-17 84.0
Msa0981450 MtrunA17_Chr2g0288251 24.870 193 116 5 262 426 141 332 6.40e-12 68.6
Msa0981450 MtrunA17_Chr4g0074711 25.281 178 110 5 270 425 168 344 8.24e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0981450 AT5G61960.3 46.782 979 430 23 1 958 1 909 0.0 688
Msa0981450 AT5G61960.1 46.782 979 430 23 1 958 1 909 0.0 688
Msa0981450 AT5G61960.10 46.782 979 430 23 1 958 1 909 0.0 688
Msa0981450 AT5G61960.2 46.782 979 430 23 1 958 1 909 0.0 688
Msa0981450 AT5G61960.7 50.354 848 380 17 132 958 75 902 0.0 680
Msa0981450 AT5G61960.4 50.354 848 380 17 132 958 75 902 0.0 680
Msa0981450 AT5G61960.8 50.354 848 380 17 132 958 75 902 0.0 680
Msa0981450 AT5G61960.11 50.354 848 380 17 132 958 75 902 0.0 680
Msa0981450 AT5G61960.6 50.354 848 380 17 132 958 75 902 0.0 680
Msa0981450 AT5G61960.9 50.354 848 380 17 132 958 75 902 0.0 680
Msa0981450 AT5G61960.5 50.354 848 380 17 132 958 75 902 0.0 680
Msa0981450 AT5G07290.1 49.308 795 362 19 187 959 131 906 0.0 653
Msa0981450 AT1G29400.1 46.847 333 150 6 114 427 2 326 3.73e-77 269
Msa0981450 AT1G29400.1 56.107 262 97 6 654 906 514 766 7.60e-71 251
Msa0981450 AT1G29400.2 46.847 333 150 6 114 427 2 326 3.73e-77 269
Msa0981450 AT1G29400.2 56.107 262 97 6 654 906 514 766 7.60e-71 251
Msa0981450 AT1G29400.3 46.847 333 150 6 114 427 2 326 3.73e-77 269
Msa0981450 AT1G29400.3 56.107 262 97 6 654 906 514 766 7.60e-71 251
Msa0981450 AT2G42890.3 48.905 274 124 3 181 438 81 354 7.40e-66 238
Msa0981450 AT2G42890.3 55.769 156 68 1 761 915 635 790 6.23e-46 178
Msa0981450 AT2G42890.2 48.905 274 124 3 181 438 81 354 7.40e-66 238
Msa0981450 AT2G42890.2 55.769 156 68 1 761 915 635 790 6.23e-46 178
Msa0981450 AT2G42890.1 48.905 274 124 3 181 438 94 367 7.54e-66 238
Msa0981450 AT2G42890.1 55.769 156 68 1 761 915 648 803 5.50e-46 179
Msa0981450 AT3G26120.1 42.308 156 68 2 790 925 405 558 2.40e-31 131
Msa0981450 AT3G26120.1 28.571 182 108 1 268 427 105 286 1.18e-18 91.7
Msa0981450 AT1G67770.1 40.506 158 75 4 778 916 320 477 5.44e-27 117
Msa0981450 AT1G67770.1 25.281 178 115 1 268 427 79 256 3.23e-16 83.6
Msa0981450 AT5G07930.1 36.975 119 61 2 790 895 132 249 3.50e-17 83.6
Msa0981450 AT5G07930.2 39.048 105 51 1 790 881 132 236 4.56e-17 82.8
Msa0981450 AT5G07930.3 36.975 119 61 2 790 895 132 249 6.15e-17 83.2
Msa0981450 AT1G37140.1 39.048 105 58 2 792 890 83 187 1.33e-15 77.8

Find 272 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAGCTCATATGGTTTAAT+TGG 0.114750 6_4:-20991012 Msa0981450:CDS
TTAACTGAAGCTTAAAATTT+TGG 0.135436 6_4:-20985853 Msa0981450:three_prime_UTR
TAATCATCATGAATAGATTT+TGG 0.178888 6_4:+20991954 None:intergenic
CATTCATCAGGCTTGAATTC+TGG 0.185196 6_4:+20986741 None:intergenic
AAAATAGGACATTGAGTTCT+AGG 0.193390 6_4:-20990022 Msa0981450:CDS
CTGAGCATTGGCGTCTTTAT+AGG 0.199813 6_4:-20985706 Msa0981450:three_prime_UTR
GAAACGAGGGCTCACAATTT+TGG 0.213621 6_4:-20986014 Msa0981450:three_prime_UTR
ATTAAAATGGCTGCCAATAT+TGG 0.228444 6_4:-20988705 Msa0981450:CDS
ATTTCTCTTTCTATAATTTC+TGG 0.240924 6_4:-20992263 Msa0981450:five_prime_UTR
TTGGAAGGAGATGAACTTTC+AGG 0.248781 6_4:-20990414 Msa0981450:CDS
TTTCATTGCATCAACATTAC+TGG 0.261551 6_4:+20988818 None:intergenic
GAAACACATTCTTACACTTT+TGG 0.261999 6_4:+20990917 None:intergenic
TCAAGGGAATTCTTCAACTT+TGG 0.278731 6_4:-20986213 Msa0981450:CDS
TTTAAAGGCAAAAGTTCTTT+TGG 0.281264 6_4:-20990345 Msa0981450:CDS
GTGAATGATTCTGATATTAA+AGG 0.288835 6_4:+20993274 None:intergenic
TTTGTCAAACACCATTAAAA+TGG 0.296917 6_4:-20988718 Msa0981450:CDS
CAATGAAAGCACTTCAAAAT+AGG 0.318732 6_4:-20990037 Msa0981450:CDS
TGTGGATCCAGTTCCAATAT+TGG 0.320691 6_4:+20988692 None:intergenic
ATCTGATGGCAGGCATATTC+AGG 0.322437 6_4:-20988664 Msa0981450:CDS
AAATTGAGGCTGACACTATA+GGG 0.330989 6_4:-20990563 Msa0981450:CDS
GGTCGCTCTCTGGTTTGGTT+TGG 0.331373 6_4:+20993396 None:intergenic
TGTTTGTTCTTCCAGCAATA+TGG 0.333713 6_4:-20990143 Msa0981450:intron
TCTGGTGGAGGCTTGGAAAA+TGG 0.333832 6_4:-20988972 Msa0981450:CDS
TGCCAAACCACAGCATTTGA+TGG 0.337784 6_4:+20988054 None:intergenic
ATACTTACTTTGAAATCAAT+TGG 0.341793 6_4:+20987092 None:intergenic
GAGGTTGAAGAGAGAGAAAA+TGG 0.343819 6_4:+20993331 None:intergenic
TGCAGAGGAATGTTGGATTA+AGG 0.349422 6_4:-20991980 Msa0981450:intron
GACATTGAGTTCTAGGAAAC+TGG 0.351184 6_4:-20990015 Msa0981450:CDS
ATAATTTCTGGATAAGCTAT+AGG 0.351986 6_4:-20992251 Msa0981450:five_prime_UTR
AACGTTTATCTTCATTCATC+AGG 0.355362 6_4:+20986729 None:intergenic
TTGAATGGAATGTGCATTGC+TGG 0.364414 6_4:-20989479 Msa0981450:CDS
GATGGTGATCCTGCTTACTC+TGG 0.364672 6_4:-20990372 Msa0981450:CDS
GAAATTGAGGCTGACACTAT+AGG 0.368667 6_4:-20990564 Msa0981450:CDS
GAAGTTTCTCATTCGTTCAT+TGG 0.372044 6_4:+20987639 None:intergenic
GATGCTTGGAGGCAGTATAA+AGG 0.373437 6_4:+20990108 None:intergenic
TCTTGGTGCAGTGAGGTTCT+TGG 0.376145 6_4:-20990661 Msa0981450:intron
GCTTCTCTCCGTTCATTGAA+TGG 0.377977 6_4:-20989494 Msa0981450:CDS
GCATCTGCTGTAAAAGTATC+TGG 0.382259 6_4:-20988846 Msa0981450:CDS
ATTCAGGGAATGATCTCAAC+TGG 0.382922 6_4:-20988648 Msa0981450:CDS
CTCTGGTTCATTATTTCAAA+AGG 0.388319 6_4:+20992225 None:intergenic
TCCCCGACAACTCTCATCTA+TGG 0.390546 6_4:+20987136 None:intergenic
CTTGGTGCAGTGAGGTTCTT+GGG 0.393851 6_4:-20990660 Msa0981450:intron
CCATCTGTATGGAATAGAAT+AGG 0.393946 6_4:+20986701 None:intergenic
GGAGAGTCTCCTGATGCTCC+TGG 0.395092 6_4:-20987865 Msa0981450:CDS
TCCGGTGTCAATGATGGTTT+AGG 0.396850 6_4:-20990510 Msa0981450:CDS
ATGGTGTTTGACAAATTGTA+AGG 0.398111 6_4:+20988726 None:intergenic
TCGCCGGTCGCTCTCTGGTT+TGG 0.399046 6_4:+20993391 None:intergenic
ACAAAAGATCTCATGATGTT+TGG 0.402289 6_4:+20993181 None:intergenic
AAAGAATGAGGGTGCAATCT+TGG 0.404397 6_4:+20988783 None:intergenic
CTTGCATATGCCCGAATTCA+AGG 0.407186 6_4:-20986788 Msa0981450:CDS
ATGGCTGCCAATATTGGAAC+TGG 0.408530 6_4:-20988699 Msa0981450:CDS
GTTAATGGCGTTGGTTCTCC+TGG 0.409145 6_4:-20988015 Msa0981450:CDS
TATGCTCGCCGGTCGCTCTC+TGG 0.409598 6_4:+20993386 None:intergenic
CTAGCTCATATGGTTTAATT+GGG 0.413117 6_4:-20991011 Msa0981450:CDS
CATGGTACACTGATGATATC+TGG 0.414020 6_4:-20989742 Msa0981450:CDS
CAGCCAGCATCTAGCTCATA+TGG 0.414663 6_4:-20991021 Msa0981450:CDS
TGAAGGTCGAGGTACATAAC+TGG 0.418769 6_4:-20985965 Msa0981450:three_prime_UTR
TTTACCGGATCACCAGCATT+TGG 0.420008 6_4:+20986677 None:intergenic
GTCATCCTAGGATTGCAATA+TGG 0.422477 6_4:-20989433 Msa0981450:intron
AACAAGATTGTCACCAATGC+AGG 0.425656 6_4:-20990988 Msa0981450:CDS
GGAAAGACAACATTCTTACT+TGG 0.427204 6_4:-20987887 Msa0981450:CDS
AATCCTACAGAGAAGGATAT+TGG 0.433618 6_4:-20989766 Msa0981450:CDS
AATCTAAAACCAGGAGCATC+AGG 0.433903 6_4:+20987856 None:intergenic
AGGAAACATCATCATAAAGA+TGG 0.434351 6_4:+20992181 None:intergenic
CTATAAAGACGCCAATGCTC+AGG 0.435935 6_4:+20985707 None:intergenic
ATGTCACAGACTAGTTTATC+CGG 0.437906 6_4:-20991156 Msa0981450:CDS
TGGATCAGCACCAGTTGTTA+CGG 0.438451 6_4:-20987920 Msa0981450:CDS
GGATCAGCACCAGTTGTTAC+GGG 0.445097 6_4:-20987919 Msa0981450:CDS
CATAACAAACCCACGATGCT+TGG 0.445998 6_4:+20990094 None:intergenic
CTCCATCAAATGCTGTGGTT+TGG 0.447636 6_4:-20988056 Msa0981450:CDS
TATCGTGATGGTTTAGCTAA+TGG 0.450083 6_4:-20988753 Msa0981450:CDS
TGCAAATATTAGAGTAAGGC+CGG 0.450326 6_4:-20986273 Msa0981450:CDS
CAGCATATGAGCCGGTGTCC+TGG 0.451181 6_4:+20987969 None:intergenic
GCTTTCACGTGCGCCTGCAT+TGG 0.451678 6_4:+20990975 None:intergenic
GGAGTTATTGCATCTGGTGG+AGG 0.451718 6_4:-20988984 Msa0981450:CDS
TATGACTCAGCCATCTCAAA+AGG 0.452052 6_4:-20989158 Msa0981450:CDS
TATTGCATCTGGTGGAGGCT+TGG 0.455373 6_4:-20988979 Msa0981450:CDS
CCCCACGCGATATGCGGCCT+AGG 0.456030 6_4:+20987557 None:intergenic
CAGGGTGATCCCGTAACAAC+TGG 0.456473 6_4:+20987910 None:intergenic
TGAATTATCACCCGAGATCA+TGG 0.457507 6_4:-20991059 Msa0981450:CDS
ATGGTGATCCTGCTTACTCT+GGG 0.457648 6_4:-20990371 Msa0981450:CDS
CAGCATTTGGACCATCTGTA+TGG 0.458360 6_4:+20986690 None:intergenic
GGAGAAGTTTAACAGTGAAA+AGG 0.460631 6_4:-20986819 Msa0981450:CDS
ATCATCAGCTTTATCATATG+TGG 0.460895 6_4:-20988104 Msa0981450:CDS
TCGTCTGGAGTTATTGCATC+TGG 0.461258 6_4:-20988990 Msa0981450:CDS
GATTTGTATGGTTCTTCCTC+AGG 0.464347 6_4:+20990594 None:intergenic
GAAGTCATGGGAAGTCTCCC+AGG 0.464747 6_4:+20987682 None:intergenic
ACGATTTGACATCCAGTGTT+GGG 0.466653 6_4:-20987738 Msa0981450:CDS
ATTTCTTCAAGAGATTTGTA+TGG 0.466918 6_4:+20990582 None:intergenic
CATCTGTATGGAATAGAATA+GGG 0.468346 6_4:+20986702 None:intergenic
AAAAGGAGGTGTGTGTTAGT+TGG 0.468735 6_4:+20993512 None:intergenic
ATGCTTGGAGGCAGTATAAA+GGG 0.471188 6_4:+20990109 None:intergenic
TGATTTCTTACTATGACCTA+AGG 0.471450 6_4:-20990073 Msa0981450:CDS
TTGGGTTCTCTAGGAAATGC+AGG 0.471896 6_4:-20987835 Msa0981450:CDS
GGACAAGATGAACCTGATCT+TGG 0.472838 6_4:-20989136 Msa0981450:CDS
CAGTTGTCACATGTCTTCCC+TGG 0.473042 6_4:-20987700 Msa0981450:CDS
ACATATGATAAAGCTGATGA+TGG 0.473859 6_4:+20988106 None:intergenic
CTATATGTTGGGATTGTTGA+AGG 0.476578 6_4:-20985675 Msa0981450:three_prime_UTR
CATTGAACTGTTAGTGCTTG+AGG 0.478549 6_4:+20986119 None:intergenic
GAGAGAAGAGTTGGAGCAGC+CGG 0.478751 6_4:-20986040 Msa0981450:three_prime_UTR
AAATTTCGACATTGAAGTCA+TGG 0.479844 6_4:+20987669 None:intergenic
CAAATCTCTTGAAGAAATTG+AGG 0.479991 6_4:-20990577 Msa0981450:CDS
GATAAACTAGTCTGTGACAT+TGG 0.480263 6_4:+20991159 None:intergenic
TTTCATGTGCAGAGGAATGT+TGG 0.480325 6_4:-20991987 Msa0981450:intron
AGCATATGAGCCGGTGTCCT+GGG 0.483499 6_4:+20987970 None:intergenic
AGTGAAATGGCAGCTTCACC+TGG 0.484170 6_4:-20991234 Msa0981450:CDS
AAGGCAGCTGTGATGCAGAT+AGG 0.484556 6_4:+20988934 None:intergenic
TGGTCCAAATGCTGGTGATC+CGG 0.486226 6_4:-20986681 Msa0981450:intron
GATTTGTTCAGCAGTGGTGG+AGG 0.487187 6_4:-20990444 Msa0981450:CDS
ATATTTGCACCCAAGGGAAA+AGG 0.487350 6_4:+20986287 None:intergenic
TATTTGATATGATTCATCTC+TGG 0.487550 6_4:+20989548 None:intergenic
AAACCAAACCAGAGAGCGAC+CGG 0.490438 6_4:-20993394 Msa0981450:five_prime_UTR
AGCCATAGATGAGAGTTGTC+GGG 0.490777 6_4:-20987138 Msa0981450:CDS
TGGAGGCAGTATAAAGGGTT+CGG 0.491188 6_4:+20990114 None:intergenic
AGCCACCATATTGCAATCCT+AGG 0.491608 6_4:+20989428 None:intergenic
GTAAGAATGTTGTCTTTCCC+AGG 0.492218 6_4:+20987891 None:intergenic
CTAGGCATCTGAGGAAGACC+AGG 0.494575 6_4:+20987997 None:intergenic
TAGTGCATTGTGTGTTTCAA+GGG 0.494866 6_4:-20985794 Msa0981450:three_prime_UTR
GATAGCGAGAAATACTTGTT+GGG 0.496306 6_4:+20987499 None:intergenic
TGTGTGAGAGAGAGAAGAGT+TGG 0.498399 6_4:-20986049 Msa0981450:three_prime_UTR
TGAGCTAAAGGCTCTCTTTG+AGG 0.498928 6_4:-20990265 Msa0981450:intron
GCAGTGAGGTTCTTGGGAAA+TGG 0.500531 6_4:-20990654 Msa0981450:intron
TGCAGAAGACTCTGAGCTAA+AGG 0.500582 6_4:-20990277 Msa0981450:CDS
TGCACATCAGACCATGATCT+CGG 0.501021 6_4:+20991048 None:intergenic
CTCAGATGCCTAGCTTTCCC+AGG 0.501075 6_4:-20987987 Msa0981450:CDS
AATAATTACCTCAGAAGCAT+AGG 0.505187 6_4:+20992161 None:intergenic
AGATGCCCCTCTTGCGGTGT+TGG 0.505306 6_4:+20988863 None:intergenic
TTGAGATTATGACCAAGATC+AGG 0.507730 6_4:+20989124 None:intergenic
CATACAGATGGTCCAAATGC+TGG 0.508760 6_4:-20986689 Msa0981450:CDS
CAGCCATAGATGAGAGTTGT+CGG 0.511525 6_4:-20987139 Msa0981450:CDS
TTTGATTTGTTCAGCAGTGG+TGG 0.512433 6_4:-20990447 Msa0981450:CDS
AAACTTGTAAGATGGTAGAA+TGG 0.514669 6_4:+20985888 None:intergenic
TACTCTAATATTTGCACCCA+AGG 0.516015 6_4:+20986280 None:intergenic
CATATGATAAAGCTGATGAT+GGG 0.516748 6_4:+20988107 None:intergenic
TCTATGGTGAAACATTGATA+AGG 0.517049 6_4:-20993095 Msa0981450:five_prime_UTR
TTGCAGAACAAGTGTAATGT+TGG 0.517297 6_4:-20986995 Msa0981450:intron
TGAATTCCTTATGCTGTAGA+CGG 0.518987 6_4:-20993155 Msa0981450:five_prime_UTR
AAGACATGTGACAACTGCTT+AGG 0.520883 6_4:+20987706 None:intergenic
CCACAGAAGCATCTGATGGC+AGG 0.521735 6_4:-20988674 Msa0981450:CDS
CCAACGCCATTAACAAAAGA+TGG 0.523153 6_4:+20988024 None:intergenic
CGATACTCAGGCAAAGAATG+AGG 0.523522 6_4:+20988771 None:intergenic
TTCATCAACATGATTGATCC+TGG 0.523625 6_4:-20986965 Msa0981450:CDS
ATAGTGCATTGTGTGTTTCA+AGG 0.523792 6_4:-20985795 Msa0981450:three_prime_UTR
CATCTTATTCTTAAGACAGA+AGG 0.524749 6_4:-20989098 Msa0981450:CDS
GTCTCTCTAAACTTGTAAGA+TGG 0.527628 6_4:+20985880 None:intergenic
GAAGAGTAGAGGCGAATCTC+CGG 0.527693 6_4:+20993354 None:intergenic
TGTGAGCCCTCGTTTCCTAC+CGG 0.528611 6_4:+20986021 None:intergenic
AGGTTGAAGAGAGAGAAAAT+GGG 0.529333 6_4:+20993332 None:intergenic
AATAACTCCAGACGATAGTC+CGG 0.529618 6_4:+20988998 None:intergenic
TTTACAGCCGGACTATCGTC+TGG 0.530189 6_4:-20989005 Msa0981450:intron
TCTCAAGTAACCTGGTGGAA+TGG 0.531415 6_4:+20986932 None:intergenic
GAAAACAGATCATCTTCGTC+GGG 0.531898 6_4:+20990531 None:intergenic
AGCTTGAACCTGGTCATCCT+AGG 0.535589 6_4:-20989445 Msa0981450:CDS
AAGCAGATCAAGCTTGAACC+TGG 0.538364 6_4:-20989455 Msa0981450:CDS
GTTCAGCAGTGGTGGAGGCA+TGG 0.539659 6_4:-20990439 Msa0981450:CDS
AAACCATATGAGCTAGATGC+TGG 0.540798 6_4:+20991018 None:intergenic
TACAGCAGATGCCCCTCTTG+CGG 0.541207 6_4:+20988857 None:intergenic
TTGACATCCAGTGTTGGGCA+TGG 0.541362 6_4:-20987733 Msa0981450:CDS
AACGATTTGACATCCAGTGT+TGG 0.541528 6_4:-20987739 Msa0981450:CDS
AAAAGAATCAGTGGCTTGGA+TGG 0.542438 6_4:-20990390 Msa0981450:CDS
CAGCTTTATCATATGTGGAA+TGG 0.542662 6_4:-20988099 Msa0981450:CDS
CCTGCCATCAGATGCTTCTG+TGG 0.542912 6_4:+20988674 None:intergenic
AGGAGAGCCATGCCCAACAC+TGG 0.543846 6_4:+20987726 None:intergenic
CAGTGGTGGAGGCATGGAGT+TGG 0.544371 6_4:-20990433 Msa0981450:CDS
GGAAACATCATCATAAAGAT+GGG 0.545230 6_4:+20992182 None:intergenic
TTCAACAAAGCTAGCAAGTG+AGG 0.546113 6_4:-20992301 Msa0981450:five_prime_UTR
AGAGAAAATGGGAAGAGTAG+AGG 0.547636 6_4:+20993343 None:intergenic
GGCGAGGTTGTTATGCTCGC+CGG 0.548863 6_4:+20993375 None:intergenic
TGGGTGCAAATATTAGAGTA+AGG 0.549885 6_4:-20986277 Msa0981450:CDS
ATGACTCAGCCATCTCAAAA+GGG 0.550864 6_4:-20989157 Msa0981450:CDS
AACAAACCCACGATGCTTGG+AGG 0.551442 6_4:+20990097 None:intergenic
TAGCTGGCAGTTGCATCCTC+CGG 0.553694 6_4:-20987803 Msa0981450:CDS
TGTCACAGACTAGTTTATCC+GGG 0.553964 6_4:-20991155 Msa0981450:CDS
ACCTAGGCCGCATATCGCGT+GGG 0.553997 6_4:-20987558 Msa0981450:CDS
TCTGATCAGAATATTACTGC+TGG 0.554637 6_4:-20990624 Msa0981450:CDS
AACATGTTGCTTGAAAGATC+CGG 0.556555 6_4:+20987784 None:intergenic
TTCAACTTTGGCAAATGCAG+AGG 0.557116 6_4:-20986201 Msa0981450:CDS
TTGTTTGTATCCCTGAGCAT+TGG 0.557385 6_4:-20985718 Msa0981450:three_prime_UTR
TCTGATGGCAGGCATATTCA+GGG 0.557958 6_4:-20988663 Msa0981450:CDS
CTGGGAAAGCTAGGCATCTG+AGG 0.559188 6_4:+20987988 None:intergenic
TTGAAGAATTCCCTTGACTA+CGG 0.559870 6_4:+20986219 None:intergenic
TTAAAAGCCCCAGAGTAAGC+AGG 0.560466 6_4:+20990363 None:intergenic
AACGAGGAGAGCCGTAGTCA+AGG 0.561117 6_4:-20986230 Msa0981450:CDS
GAAAGACAACATTCTTACTT+GGG 0.563473 6_4:-20987886 Msa0981450:CDS
AAGCAGTAGTAACACCCCTC+TGG 0.563767 6_4:+20992208 None:intergenic
GCACATCAGACCATGATCTC+GGG 0.565376 6_4:+20991049 None:intergenic
AATTTCGACATTGAAGTCAT+GGG 0.565453 6_4:+20987670 None:intergenic
AGTATTTCCAACACCGCAAG+AGG 0.565609 6_4:-20988870 Msa0981450:CDS
GACCTAGGCCGCATATCGCG+TGG 0.567782 6_4:-20987559 Msa0981450:CDS
ACGAGGAGAGCCGTAGTCAA+GGG 0.569069 6_4:-20986229 Msa0981450:CDS
TCTTTGCCTGAGTATCGTGA+TGG 0.573141 6_4:-20988765 Msa0981450:CDS
GCCGGTGTCCTGGGAAAGCT+AGG 0.574300 6_4:+20987979 None:intergenic
ATCTGATATTGCAATGTGGA+AGG 0.579100 6_4:-20993222 Msa0981450:five_prime_UTR
TACTGCTGGTTCTCTTCCTG+AGG 0.579244 6_4:-20990610 Msa0981450:CDS
TCTGGAGTTATTGCATCTGG+TGG 0.580561 6_4:-20988987 Msa0981450:CDS
ATACTGCCTCCAAGCATCGT+GGG 0.580674 6_4:-20990103 Msa0981450:CDS
ACAGATCATCTTCGTCGGGA+AGG 0.581398 6_4:+20990535 None:intergenic
ATCTTATTCTTAAGACAGAA+GGG 0.583393 6_4:-20989097 Msa0981450:intron
AGTTGTTACGGGATCACCCT+GGG 0.584532 6_4:-20987908 Msa0981450:CDS
TGTCTTCCCCACGCGATATG+CGG 0.585805 6_4:+20987551 None:intergenic
TGGCATGGTAGATGCGCTGA+AGG 0.585812 6_4:-20991097 Msa0981450:CDS
TATAAAGACGCCAATGCTCA+GGG 0.586782 6_4:+20985708 None:intergenic
TATACGTTATTCAATTCCAA+AGG 0.587943 6_4:-20989991 Msa0981450:intron
TGGAATGGAATTATTTGACC+AGG 0.588103 6_4:+20986947 None:intergenic
TCACATATTGACCACCATGT+TGG 0.588386 6_4:-20987940 Msa0981450:CDS
AGTTGTCACATGTCTTCCCT+GGG 0.589289 6_4:-20987699 Msa0981450:CDS
GATTTCTTACTATGACCTAA+GGG 0.592591 6_4:-20990072 Msa0981450:CDS
CCGGGAAAATTACGTAGTAG+TGG 0.594703 6_4:-20986254 Msa0981450:CDS
TGCACATTCCATTCAATGAA+CGG 0.594988 6_4:+20989486 None:intergenic
GCTAAACCATCACGATACTC+AGG 0.595277 6_4:+20988759 None:intergenic
TGGCCAATATCCTTCTCTGT+AGG 0.595679 6_4:+20989763 None:intergenic
CCTATTCTATTCCATACAGA+TGG 0.596105 6_4:-20986701 Msa0981450:CDS
TATACTGCCTCCAAGCATCG+TGG 0.596726 6_4:-20990104 Msa0981450:CDS
ATTGCAATGTGGAAGGAACA+AGG 0.596793 6_4:-20993215 Msa0981450:five_prime_UTR
TCAAATAATTCCATTCCACC+AGG 0.598283 6_4:-20986942 Msa0981450:intron
GCAAATATTAGAGTAAGGCC+GGG 0.599001 6_4:-20986272 Msa0981450:CDS
TATGTTGGGATTGTTGAAGG+AGG 0.599181 6_4:-20985672 Msa0981450:three_prime_UTR
GGAGCAGCCGGTAGGAAACG+AGG 0.600020 6_4:-20986028 Msa0981450:three_prime_UTR
AGATGCGCTGAAGGATTCAA+AGG 0.602052 6_4:-20991088 Msa0981450:CDS
ACACACAATGCACTATCTCA+AGG 0.602220 6_4:+20985802 None:intergenic
TAAGAATGTTGTCTTTCCCA+GGG 0.605754 6_4:+20987892 None:intergenic
GGAAAACAGATCATCTTCGT+CGG 0.606267 6_4:+20990530 None:intergenic
GATCATGGTCTGATGTGCAT+AGG 0.608179 6_4:-20991044 Msa0981450:CDS
GGCGAGCATAACAACCTCGC+CGG 0.608997 6_4:-20993373 Msa0981450:five_prime_UTR
AAACAATTTGAACTCGACCT+AGG 0.609109 6_4:-20987574 Msa0981450:CDS
TGATGTTTCCTATGCTTCTG+AGG 0.609927 6_4:-20992169 Msa0981450:intron
ACTCTAATATTTGCACCCAA+GGG 0.610162 6_4:+20986281 None:intergenic
ATACAATGACGGAGTTGACA+TGG 0.611021 6_4:+20986089 None:intergenic
ATTGCAATCCTAGGATGACC+AGG 0.613668 6_4:+20989437 None:intergenic
TCAGTGTCTCTTGAAGAACT+TGG 0.613951 6_4:+20986152 None:intergenic
GATACTCAGGCAAAGAATGA+GGG 0.614189 6_4:+20988772 None:intergenic
TTAGGGAAATCCTACAGAGA+AGG 0.614924 6_4:-20989773 Msa0981450:intron
CAGTTGTTACGGGATCACCC+TGG 0.615223 6_4:-20987909 Msa0981450:CDS
CACACAATGCACTATCTCAA+GGG 0.615418 6_4:+20985803 None:intergenic
TCCTAAACCATCATTGACAC+CGG 0.616663 6_4:+20990509 None:intergenic
GAAGAGTTGGAGCAGCCGGT+AGG 0.617689 6_4:-20986036 Msa0981450:three_prime_UTR
TAAAATGTAATATACAATGA+CGG 0.618910 6_4:+20986078 None:intergenic
TCAGACAAAGAGAAGAAGAG+AGG 0.622728 6_4:+20993427 None:intergenic
ACAGAGAAGGATATTGGCCA+TGG 0.628087 6_4:-20989760 Msa0981450:CDS
GGTGGAGGCATGGAGTTGGA+AGG 0.628119 6_4:-20990429 Msa0981450:CDS
GATAAAGCTGATGATGGGGA+AGG 0.628408 6_4:+20988112 None:intergenic
TTATCGAAGAAAGCATTCAA+AGG 0.630674 6_4:+20988915 None:intergenic
TATTTCCAACACCGCAAGAG+GGG 0.630709 6_4:-20988868 Msa0981450:CDS
AATTGAGGCTGACACTATAG+GGG 0.630862 6_4:-20990562 Msa0981450:CDS
CCTAGGCCGCATATCGCGTG+GGG 0.630872 6_4:-20987557 Msa0981450:CDS
GAAGTGTGCAAAATGCCTCC+AGG 0.633750 6_4:+20991216 None:intergenic
GCCTAGCTTTCCCAGGACAC+CGG 0.635023 6_4:-20987980 Msa0981450:CDS
GTATTTCCAACACCGCAAGA+GGG 0.639319 6_4:-20988869 Msa0981450:CDS
GGATCCACAGAAGCATCTGA+TGG 0.639641 6_4:-20988678 Msa0981450:CDS
GCCATAGATGAGAGTTGTCG+GGG 0.642771 6_4:-20987137 Msa0981450:CDS
ATATGATAAAGCTGATGATG+GGG 0.645684 6_4:+20988108 None:intergenic
AATGCAGAGGAGTTTGCAAG+TGG 0.646273 6_4:-20986188 Msa0981450:CDS
CAACTGGTGCTGATCCAACA+TGG 0.647951 6_4:+20987926 None:intergenic
GCAATCTCCATCAAATGCTG+TGG 0.648016 6_4:-20988061 Msa0981450:CDS
TTCAGGGAATGATCTCAACT+GGG 0.655695 6_4:-20988647 Msa0981450:CDS
GAGCAGCCGGTAGGAAACGA+GGG 0.658135 6_4:-20986027 Msa0981450:three_prime_UTR
ATTCATGATGATTATCCACA+AGG 0.660419 6_4:-20991945 Msa0981450:intron
AGAGAACCCAATCTAAAACC+AGG 0.663738 6_4:+20987847 None:intergenic
AAGTCATGGGAAGTCTCCCA+GGG 0.664771 6_4:+20987683 None:intergenic
GTCACAGACTAGTTTATCCG+GGG 0.680067 6_4:-20991154 Msa0981450:CDS
AAAATCATCTGAATTGTGTG+AGG 0.682133 6_4:+20993312 None:intergenic
GAAATGGCAGCTTCACCTGG+AGG 0.683059 6_4:-20991231 Msa0981450:CDS
CAGATATCATCAGTGTACCA+TGG 0.683392 6_4:+20989743 None:intergenic
ATGTTGCTTGAAAGATCCGG+AGG 0.688619 6_4:+20987787 None:intergenic
GATGCTCTCAGCATATGAGC+CGG 0.694610 6_4:+20987961 None:intergenic
TGGTGATCCTGCTTACTCTG+GGG 0.696259 6_4:-20990370 Msa0981450:CDS
CTGTATGGAATAGAATAGGG+CGG 0.700349 6_4:+20986705 None:intergenic
ATATATCTGATATTGCAATG+TGG 0.733494 6_4:-20993226 Msa0981450:five_prime_UTR
ATTACGTAGTAGTGGCAACG+AGG 0.734571 6_4:-20986246 Msa0981450:CDS
GTAGAGGCGAATCTCCGGCG+AGG 0.740182 6_4:+20993359 None:intergenic
TTTGAAATAATGAACCAGAG+GGG 0.758778 6_4:-20992222 Msa0981450:CDS
CTGGTGCTGATCCAACATGG+TGG 0.828834 6_4:+20987929 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTATAAATATTGTTTT+TGG - chr6_4:20986483-20986502 Msa0981450:intron 10.0%
!!! TAATATAAATGTTACTTTTT+GGG - chr6_4:20986731-20986750 Msa0981450:CDS 10.0%
!!! AATATTCATGTTTTTTGTTT+TGG - chr6_4:20986171-20986190 Msa0981450:CDS 15.0%
!!! ATACATATTTTTTCCATAAA+GGG + chr6_4:20986284-20986303 None:intergenic 15.0%
!!! AATACATATTTTTTCCATAA+AGG + chr6_4:20986285-20986304 None:intergenic 15.0%
!!! CTAATATAAATGTTACTTTT+TGG - chr6_4:20986730-20986749 Msa0981450:CDS 15.0%
!! AACAGAAAACAATAAATAAA+AGG + chr6_4:20986794-20986813 None:intergenic 15.0%
!! TGTAAAAAAATAAAGACAAA+AGG + chr6_4:20988936-20988955 None:intergenic 15.0%
!!! ATAAATGATAATAATGGAAA+AGG + chr6_4:20989244-20989263 None:intergenic 15.0%
!! TTCCATTATTATCATTTATT+TGG - chr6_4:20989245-20989264 Msa0981450:intron 15.0%
!! AACCAAATAAATGATAATAA+TGG + chr6_4:20989250-20989269 None:intergenic 15.0%
!! AAAGATGAATTTATTTCAAA+AGG - chr6_4:20990659-20990678 Msa0981450:intron 15.0%
!!! ACTTATTGTTTTACTTTAAA+TGG - chr6_4:20990686-20990705 Msa0981450:intron 15.0%
!!! ATTTTGAAATTTTTAACATC+AGG - chr6_4:20991027-20991046 Msa0981450:CDS 15.0%
!!! TGTTTTACAAATTGTTTATT+TGG - chr6_4:20991742-20991761 Msa0981450:intron 15.0%
!! TATTAATACATATGTCAAAT+AGG + chr6_4:20991980-20991999 None:intergenic 15.0%
!!! ATTTGTTAACATTTATAGTT+AGG - chr6_4:20992617-20992636 Msa0981450:intron 15.0%
!! ACATTAAGTACTTAAAAAAT+AGG + chr6_4:20992734-20992753 None:intergenic 15.0%
!! TTTAAGTACTTAATGTAATA+AGG - chr6_4:20992738-20992757 Msa0981450:intron 15.0%
!! TAAAATGTAATATACAATGA+CGG + chr6_4:20993096-20993115 None:intergenic 15.0%
!!! TATTTACCTAAATTTTTGTA+TGG - chr6_4:20993258-20993277 Msa0981450:five_prime_UTR 15.0%
!! GAAAAGAATAGAAAAAGAAA+AGG + chr6_4:20985679-20985698 None:intergenic 20.0%
!! CTCACAAAAAAAGATAAAAA+TGG + chr6_4:20985922-20985941 None:intergenic 20.0%
!!! ATTTTGCAAATTTACAAAGA+TGG - chr6_4:20986449-20986468 Msa0981450:intron 20.0%
!! ATTTCTCTTTCTATAATTTC+TGG - chr6_4:20986908-20986927 Msa0981450:intron 20.0%
!! GACATGTTTAGAAAAAAAAA+AGG + chr6_4:20987157-20987176 None:intergenic 20.0%
!!! TTTTTTTTCTAAACATGTCT+TGG - chr6_4:20987158-20987177 Msa0981450:CDS 20.0%
!!! TAATCATCATGAATAGATTT+TGG + chr6_4:20987220-20987239 None:intergenic 20.0%
!!! GCATTTAGAATAAATAACTA+TGG - chr6_4:20987567-20987586 Msa0981450:CDS 20.0%
!! TTAGAATAAATAACTATGGA+TGG - chr6_4:20987571-20987590 Msa0981450:CDS 20.0%
!!! ATCGTTTATTTCATTTTGTA+GGG - chr6_4:20987605-20987624 Msa0981450:CDS 20.0%
!!! GGTATTAATAGATTTCTTTT+TGG - chr6_4:20987631-20987650 Msa0981450:CDS 20.0%
!!! GTTTTTAATCATGATGATAT+TGG - chr6_4:20987776-20987795 Msa0981450:CDS 20.0%
!! TTAAATGAACTGCTTATTTA+TGG + chr6_4:20987859-20987878 None:intergenic 20.0%
!! TAAATAAGCAGTTCATTTAA+TGG - chr6_4:20987859-20987878 Msa0981450:CDS 20.0%
!!! TTGTCTTTATTTTTTTACAG+CGG - chr6_4:20988937-20988956 Msa0981450:CDS 20.0%
!! ATCATTTATTTGGTTAAAGA+CGG - chr6_4:20989255-20989274 Msa0981450:intron 20.0%
!!! AAACGTATTTTTGGATTTTA+TGG - chr6_4:20989483-20989502 Msa0981450:CDS 20.0%
!! ACAAAACATATATCAAAGAT+AGG + chr6_4:20989854-20989873 None:intergenic 20.0%
!! AAAAGCAAGAATACTATATA+AGG + chr6_4:20989919-20989938 None:intergenic 20.0%
!!! AAATTTTTAACATCAGGAAA+TGG - chr6_4:20991033-20991052 Msa0981450:CDS 20.0%
!!! AATTTTTAACATCAGGAAAT+GGG - chr6_4:20991034-20991053 Msa0981450:CDS 20.0%
!! TGACATATGTATTAATATCT+CGG - chr6_4:20991983-20992002 Msa0981450:intron 20.0%
!!! ATACTTACTTTGAAATCAAT+TGG + chr6_4:20992082-20992101 None:intergenic 20.0%
!! TTTCAAAGTAAGTATTTGTT+TGG - chr6_4:20992087-20992106 Msa0981450:intron 20.0%
!!! TTAACTGAAGCTTAAAATTT+TGG - chr6_4:20993318-20993337 Msa0981450:five_prime_UTR 20.0%
! AAGAATAGAAAAAGAAAAGG+AGG + chr6_4:20985676-20985695 None:intergenic 25.0%
!!! AAGAGAGGTTTTTTTTGTTT+TGG + chr6_4:20985732-20985751 None:intergenic 25.0%
! GTGAATGATTCTGATATTAA+AGG + chr6_4:20985900-20985919 None:intergenic 25.0%
! ATATATCTGATATTGCAATG+TGG - chr6_4:20985945-20985964 Msa0981450:three_prime_UTR 25.0%
!!! TTGTTTTTTGCTCAATTCTA+TGG - chr6_4:20986060-20986079 Msa0981450:three_prime_UTR 25.0%
!! ACATTGATAAGGAAGATTTT+TGG - chr6_4:20986087-20986106 Msa0981450:three_prime_UTR 25.0%
!!! TTTGGTTTTTATGTCCATTT+GGG - chr6_4:20986197-20986216 Msa0981450:CDS 25.0%
!!! TCTTGATCTGTTTGTTTTTA+AGG - chr6_4:20986311-20986330 Msa0981450:intron 25.0%
!!! ATTGTTTTTGGCAATCAATT+AGG - chr6_4:20986495-20986514 Msa0981450:intron 25.0%
! AAAGAGATTAGTGCAAAATT+AGG + chr6_4:20986594-20986613 None:intergenic 25.0%
! CAATAAATAAAAGGTGACAT+TGG + chr6_4:20986785-20986804 None:intergenic 25.0%
! ATCATCTGTTGAAAAATTCA+AGG + chr6_4:20986839-20986858 None:intergenic 25.0%
!! ATAATTTCTGGATAAGCTAT+AGG - chr6_4:20986920-20986939 Msa0981450:intron 25.0%
!!! TTTTGAAATAATGAACCAGA+GGG - chr6_4:20986948-20986967 Msa0981450:CDS 25.0%
! AAAACCAAAATGAGACAATT+CGG + chr6_4:20987038-20987057 None:intergenic 25.0%
! TAAAAAAACACTCAAAGTCT+TGG + chr6_4:20987079-20987098 None:intergenic 25.0%
! AAAAAAAGGCAATAACATTG+AGG + chr6_4:20987143-20987162 None:intergenic 25.0%
! CTTTGGTTAGTAGATATATA+TGG + chr6_4:20987327-20987346 None:intergenic 25.0%
!! CATCGTTTATTTCATTTTGT+AGG - chr6_4:20987604-20987623 Msa0981450:CDS 25.0%
!! AGTTCTATGTTCAAATTTTC+AGG - chr6_4:20987910-20987929 Msa0981450:CDS 25.0%
!! GTTCTATGTTCAAATTTTCA+GGG - chr6_4:20987911-20987930 Msa0981450:CDS 25.0%
!!! TATTTTTGCATTTCTTTCGA+GGG + chr6_4:20987986-20988005 None:intergenic 25.0%
!!! GTTTTAGAAAACGTACATTT+TGG - chr6_4:20988042-20988061 Msa0981450:CDS 25.0%
! TGCATCGTAACAAAATTAAA+TGG + chr6_4:20988327-20988346 None:intergenic 25.0%
!!! ATGTTTTTTGTTGAGTTCAA+TGG - chr6_4:20988447-20988466 Msa0981450:intron 25.0%
! ATTTCTTCAAGAGATTTGTA+TGG + chr6_4:20988592-20988611 None:intergenic 25.0%
!! TTTAAAGGCAAAAGTTCTTT+TGG - chr6_4:20988826-20988845 Msa0981450:CDS 25.0%
! TATACGTTATTCAATTCCAA+AGG - chr6_4:20989180-20989199 Msa0981450:intron 25.0%
!!! TATTCCTATTTTTCATGTTC+TGG - chr6_4:20989346-20989365 Msa0981450:intron 25.0%
! ATAACCAGAACATGAAAAAT+AGG + chr6_4:20989353-20989372 None:intergenic 25.0%
!! ATTTTATGGAGAAATCAAAG+AGG - chr6_4:20989497-20989516 Msa0981450:CDS 25.0%
! TATTTGATATGATTCATCTC+TGG + chr6_4:20989626-20989645 None:intergenic 25.0%
!! ATTGAATTTTATGATGTTCG+AGG - chr6_4:20989647-20989666 Msa0981450:intron 25.0%
!!! ATAGTATTCTTGCTTTTTAG+TGG - chr6_4:20989922-20989941 Msa0981450:intron 25.0%
! ATCTTATTCTTAAGACAGAA+GGG - chr6_4:20990074-20990093 Msa0981450:CDS 25.0%
! TTTGTCAAACACCATTAAAA+TGG - chr6_4:20990453-20990472 Msa0981450:CDS 25.0%
! TATACTACTTATAGGTAGAA+AGG + chr6_4:20990922-20990941 None:intergenic 25.0%
! AATAGAAGAAAAATATGCAC+AGG + chr6_4:20991864-20991883 None:intergenic 25.0%
! GATAAAATGCTATGTTATTG+TGG - chr6_4:20992828-20992847 Msa0981450:intron 25.0%
! TGCACGAAAAAAAGAAAAAA+TGG + chr6_4:20992860-20992879 None:intergenic 25.0%
!!! ATTTTTTCTTTTTTTCGTGC+AGG - chr6_4:20992859-20992878 Msa0981450:intron 25.0%
! ATGGTTCCATACAAAAATTT+AGG + chr6_4:20993267-20993286 None:intergenic 25.0%
!! TAGGATTTTTGTCTATATGT+TGG - chr6_4:20993484-20993503 Msa0981450:five_prime_UTR 25.0%
!! AGGATTTTTGTCTATATGTT+GGG - chr6_4:20993485-20993504 Msa0981450:five_prime_UTR 25.0%
AAAATCATCTGAATTGTGTG+AGG + chr6_4:20985862-20985881 None:intergenic 30.0%
ACAAAAGATCTCATGATGTT+TGG + chr6_4:20985993-20986012 None:intergenic 30.0%
TCTATGGTGAAACATTGATA+AGG - chr6_4:20986076-20986095 Msa0981450:three_prime_UTR 30.0%
! TTTTGTTCGAATTGTTGACA+AGG - chr6_4:20986128-20986147 Msa0981450:three_prime_UTR 30.0%
!!! TGTTTTTTGTTTTGGCTGTT+TGG - chr6_4:20986179-20986198 Msa0981450:CDS 30.0%
!!! GTTTGGTTTTTATGTCCATT+TGG - chr6_4:20986196-20986215 Msa0981450:CDS 30.0%
ACAGATCAAAAACATGAACA+TGG + chr6_4:20986242-20986261 None:intergenic 30.0%
TGTTTAGATTAGACCCTTTA+TGG - chr6_4:20986268-20986287 Msa0981450:CDS 30.0%
TAGAAATAGAGCCTCTAAAT+AGG - chr6_4:20986632-20986651 Msa0981450:intron 30.0%
AGAAATAGAGCCTCTAAATA+GGG - chr6_4:20986633-20986652 Msa0981450:intron 30.0%
ACTAAAGAAACCCTATTTAG+AGG + chr6_4:20986646-20986665 None:intergenic 30.0%
!!! TCCTTTTTTGTTTGAGAGTA+TGG - chr6_4:20986684-20986703 Msa0981450:CDS 30.0%
ACCATACTCTCAAACAAAAA+AGG + chr6_4:20986688-20986707 None:intergenic 30.0%
!! TTTTGTTTGAGAGTATGGTA+TGG - chr6_4:20986689-20986708 Msa0981450:CDS 30.0%
! TTTGTTTGAGAGTATGGTAT+GGG - chr6_4:20986690-20986709 Msa0981450:CDS 30.0%
! CTCTGGTTCATTATTTCAAA+AGG + chr6_4:20986949-20986968 None:intergenic 30.0%
!!! CTTTTGAAATAATGAACCAG+AGG - chr6_4:20986947-20986966 Msa0981450:CDS 30.0%
! TTTGAAATAATGAACCAGAG+GGG - chr6_4:20986949-20986968 Msa0981450:CDS 30.0%
GGAAACATCATCATAAAGAT+GGG + chr6_4:20986992-20987011 None:intergenic 30.0%
AGGAAACATCATCATAAAGA+TGG + chr6_4:20986993-20987012 None:intergenic 30.0%
! AATAATTACCTCAGAAGCAT+AGG + chr6_4:20987013-20987032 None:intergenic 30.0%
! TTTTCCGAATTGTCTCATTT+TGG - chr6_4:20987031-20987050 Msa0981450:intron 30.0%
ATTCATGATGATTATCCACA+AGG - chr6_4:20987226-20987245 Msa0981450:intron 30.0%
AGGTAAGGTACACAAAAATA+TGG + chr6_4:20987457-20987476 None:intergenic 30.0%
!! ATTAAAACTAGAGAGGTATC+AGG + chr6_4:20987477-20987496 None:intergenic 30.0%
CTGTTCAATTAAAACTAGAG+AGG + chr6_4:20987484-20987503 None:intergenic 30.0%
CGACAGTAAAAGTTCAAAAA+TGG + chr6_4:20987519-20987538 None:intergenic 30.0%
TAAAACATCTATACCATCCT+GGG + chr6_4:20987545-20987564 None:intergenic 30.0%
ATAAAACATCTATACCATCC+TGG + chr6_4:20987546-20987565 None:intergenic 30.0%
! TTATTTCATTTTGTAGGGAG+TGG - chr6_4:20987610-20987629 Msa0981450:CDS 30.0%
! GATATAGCTTGCGTAATTAA+TGG - chr6_4:20987677-20987696 Msa0981450:CDS 30.0%
AAGTAAACACACACGAATAT+GGG + chr6_4:20987831-20987850 None:intergenic 30.0%
TGGACATGTAATTCATTTGT+TGG - chr6_4:20987879-20987898 Msa0981450:CDS 30.0%
!!! CTATTTTTGCATTTCTTTCG+AGG + chr6_4:20987987-20988006 None:intergenic 30.0%
CTCGAAAGAAATGCAAAAAT+AGG - chr6_4:20987985-20988004 Msa0981450:CDS 30.0%
! TCTAGCTCATATGGTTTAAT+TGG - chr6_4:20988159-20988178 Msa0981450:intron 30.0%
CTAGCTCATATGGTTTAATT+GGG - chr6_4:20988160-20988179 Msa0981450:intron 30.0%
!! ACACTTTTGGCTAAACATAT+CGG + chr6_4:20988244-20988263 None:intergenic 30.0%
! GAAACACATTCTTACACTTT+TGG + chr6_4:20988257-20988276 None:intergenic 30.0%
! AATAGAAAAGTTCCCTTTTC+TGG + chr6_4:20988426-20988445 None:intergenic 30.0%
CAAATCTCTTGAAGAAATTG+AGG - chr6_4:20988594-20988613 Msa0981450:intron 30.0%
!!! TCTTCTAGAACACTTTTTGT+TGG - chr6_4:20988856-20988875 Msa0981450:CDS 30.0%
TGATTTCTTACTATGACCTA+AGG - chr6_4:20989098-20989117 Msa0981450:CDS 30.0%
GATTTCTTACTATGACCTAA+GGG - chr6_4:20989099-20989118 Msa0981450:CDS 30.0%
!! CAATGAAAGCACTTCAAAAT+AGG - chr6_4:20989134-20989153 Msa0981450:CDS 30.0%
AAAATAGGACATTGAGTTCT+AGG - chr6_4:20989149-20989168 Msa0981450:CDS 30.0%
ACTAAACAAGATGATACCTT+TGG + chr6_4:20989199-20989218 None:intergenic 30.0%
! GACGAACTAAAACGTATTTT+TGG - chr6_4:20989474-20989493 Msa0981450:CDS 30.0%
AGAGGTAAGTTATTCTTTGT+TGG - chr6_4:20989515-20989534 Msa0981450:CDS 30.0%
TTGATATACAAGCACCAAAA+GGG + chr6_4:20989549-20989568 None:intergenic 30.0%
TTTGATATACAAGCACCAAA+AGG + chr6_4:20989550-20989569 None:intergenic 30.0%
GGTAACAAGAATAAATATGC+AGG + chr6_4:20989898-20989917 None:intergenic 30.0%
CATCTTATTCTTAAGACAGA+AGG - chr6_4:20990073-20990092 Msa0981450:CDS 30.0%
TTTAGAAGCTAAGATCTACT+TGG - chr6_4:20990128-20990147 Msa0981450:CDS 30.0%
!! TTATCGAAGAAAGCATTCAA+AGG + chr6_4:20990259-20990278 None:intergenic 30.0%
TTTCATTGCATCAACATTAC+TGG + chr6_4:20990356-20990375 None:intergenic 30.0%
ATGGTGTTTGACAAATTGTA+AGG + chr6_4:20990448-20990467 None:intergenic 30.0%
!! AATATTGGCAGCCATTTTAA+TGG + chr6_4:20990467-20990486 None:intergenic 30.0%
ATTAAAATGGCTGCCAATAT+TGG - chr6_4:20990466-20990485 Msa0981450:CDS 30.0%
!! AACTTAGCAGATTTTAATGC+AGG - chr6_4:20990547-20990566 Msa0981450:CDS 30.0%
! GATTATCCATGAAGCTTTTT+AGG + chr6_4:20990589-20990608 None:intergenic 30.0%
! TTTTGAATTCCTAGGAATCT+AGG + chr6_4:20990715-20990734 None:intergenic 30.0%
! GTTACAGTTAATGACAGTTT+TGG - chr6_4:20990750-20990769 Msa0981450:intron 30.0%
AGTATCAGAGAATAAGCATT+TGG - chr6_4:20990862-20990881 Msa0981450:intron 30.0%
TTGGATTTCAATCTTTGTCT+TGG - chr6_4:20990881-20990900 Msa0981450:intron 30.0%
TACCTATAAGTAGTATAAGC+TGG - chr6_4:20990925-20990944 Msa0981450:intron 30.0%
ACCTATAAGTAGTATAAGCT+GGG - chr6_4:20990926-20990945 Msa0981450:intron 30.0%
! ATATGATAAAGCTGATGATG+GGG + chr6_4:20991066-20991085 None:intergenic 30.0%
CATATGATAAAGCTGATGAT+GGG + chr6_4:20991067-20991086 None:intergenic 30.0%
ACATATGATAAAGCTGATGA+TGG + chr6_4:20991068-20991087 None:intergenic 30.0%
! ATCATCAGCTTTATCATATG+TGG - chr6_4:20991067-20991086 Msa0981450:CDS 30.0%
! AAAACGCCATCTTTTGTTAA+TGG - chr6_4:20991141-20991160 Msa0981450:CDS 30.0%
GAAAGACAACATTCTTACTT+GGG - chr6_4:20991285-20991304 Msa0981450:intron 30.0%
! AGCAACATGTTTTCTCATAT+TGG - chr6_4:20991399-20991418 Msa0981450:intron 30.0%
! AACATGTTTTCTCATATTGG+TGG - chr6_4:20991402-20991421 Msa0981450:intron 30.0%
! ACATGTTTTCTCATATTGGT+GGG - chr6_4:20991403-20991422 Msa0981450:intron 30.0%
AATTTCGACATTGAAGTCAT+GGG + chr6_4:20991504-20991523 None:intergenic 30.0%
AAATTTCGACATTGAAGTCA+TGG + chr6_4:20991505-20991524 None:intergenic 30.0%
! TTTTTATCATCAGCGTTGTT+CGG + chr6_4:20991647-20991666 None:intergenic 30.0%
CTAATGCATCAAAGTGAAAA+GGG + chr6_4:20991774-20991793 None:intergenic 30.0%
ACTAATGCATCAAAGTGAAA+AGG + chr6_4:20991775-20991794 None:intergenic 30.0%
! TACCTTAAACAGATTTTCCT+AGG - chr6_4:20991907-20991926 Msa0981450:intron 30.0%
ATATGTATTAATATCTCGGC+AGG - chr6_4:20991987-20992006 Msa0981450:intron 30.0%
!! AGTAAGTATTTGTTTGGTGT+TGG - chr6_4:20992093-20992112 Msa0981450:intron 30.0%
AACGTTTATCTTCATTCATC+AGG + chr6_4:20992445-20992464 None:intergenic 30.0%
CATCTGTATGGAATAGAATA+GGG + chr6_4:20992472-20992491 None:intergenic 30.0%
TAAAGAACAAGCAGATTTAC+CGG + chr6_4:20992512-20992531 None:intergenic 30.0%
AGCAACAGGAAAATAGTTAT+AGG + chr6_4:20992535-20992554 None:intergenic 30.0%
AATGCTAGTAGTTACATTAG+AGG - chr6_4:20992653-20992672 Msa0981450:intron 30.0%
GAAATAATTCTTACTTGAGC+TGG - chr6_4:20992792-20992811 Msa0981450:intron 30.0%
! TCACAATTTTGGACTTATAG+AGG - chr6_4:20993168-20993187 Msa0981450:five_prime_UTR 30.0%
AAACTTGTAAGATGGTAGAA+TGG + chr6_4:20993286-20993305 None:intergenic 30.0%
AGGTTGAAGAGAGAGAAAAT+GGG + chr6_4:20985842-20985861 None:intergenic 35.0%
ATCTGATATTGCAATGTGGA+AGG - chr6_4:20985949-20985968 Msa0981450:three_prime_UTR 35.0%
TGAATTCCTTATGCTGTAGA+CGG - chr6_4:20986016-20986035 Msa0981450:three_prime_UTR 35.0%
! TTTGGATTTTTCTGCTAGCT+TGG - chr6_4:20986105-20986124 Msa0981450:three_prime_UTR 35.0%
TTCCTGATCAAAAACCCAAA+TGG + chr6_4:20986214-20986233 None:intergenic 35.0%
AAGCTTACAATGTTCCACAT+CGG + chr6_4:20986383-20986402 None:intergenic 35.0%
TTGGCAATCAATTAGGTAGT+TGG - chr6_4:20986502-20986521 Msa0981450:intron 35.0%
CAATCAATTAGGTAGTTGGT+AGG - chr6_4:20986506-20986525 Msa0981450:intron 35.0%
TTCAACTAAACACTACCAGA+AGG + chr6_4:20986554-20986573 None:intergenic 35.0%
! TTCTGGTAGTGTTTAGTTGA+AGG - chr6_4:20986553-20986572 Msa0981450:intron 35.0%
! TGGAGTGTTAATGTCATAGT+AGG + chr6_4:20987307-20987326 None:intergenic 35.0%
GAGTGTTAACTATCTGTCTT+TGG + chr6_4:20987344-20987363 None:intergenic 35.0%
CAAATGTGAAACAGTGATCA+AGG + chr6_4:20987370-20987389 None:intergenic 35.0%
CAAGTAAACACACACGAATA+TGG + chr6_4:20987832-20987851 None:intergenic 35.0%
!! ATTTTCAGGGAAGAGTGAAA+TGG - chr6_4:20987924-20987943 Msa0981450:CDS 35.0%
! GATAAACTAGTCTGTGACAT+TGG + chr6_4:20988015-20988034 None:intergenic 35.0%
!! ATGTCACAGACTAGTTTATC+CGG - chr6_4:20988015-20988034 Msa0981450:CDS 35.0%
!!! TACGTTTTCTAAAACTTCCC+CGG + chr6_4:20988037-20988056 None:intergenic 35.0%
!! TTCCCATATATCTCTGAGAT+TGG - chr6_4:20988472-20988491 Msa0981450:intron 35.0%
!! TCCCATATATCTCTGAGATT+GGG - chr6_4:20988473-20988492 Msa0981450:intron 35.0%
ACCCAATCTCAGAGATATAT+GGG + chr6_4:20988477-20988496 None:intergenic 35.0%
TCTGATCAGAATATTACTGC+TGG - chr6_4:20988547-20988566 Msa0981450:intron 35.0%
AAATTGAGGCTGACACTATA+GGG - chr6_4:20988608-20988627 Msa0981450:intron 35.0%
!!! GATTTTGATTTGTTCAGCAG+TGG - chr6_4:20988721-20988740 Msa0981450:CDS 35.0%
CTTTCAGGAAAAAGAATCAG+TGG - chr6_4:20988772-20988791 Msa0981450:CDS 35.0%
TGTTTGTTCTTCCAGCAATA+TGG - chr6_4:20989028-20989047 Msa0981450:intron 35.0%
! GGTATTTATGCTGTTTGTCT+TGG - chr6_4:20989276-20989295 Msa0981450:intron 35.0%
TCTCAACCTGATGACATATT+AGG - chr6_4:20989380-20989399 Msa0981450:intron 35.0%
CTCAACCTGATGACATATTA+GGG - chr6_4:20989381-20989400 Msa0981450:intron 35.0%
GATTTCCCTAATATGTCATC+AGG + chr6_4:20989389-20989408 None:intergenic 35.0%
AATCCTACAGAGAAGGATAT+TGG - chr6_4:20989405-20989424 Msa0981450:intron 35.0%
TGATATACAAGCACCAAAAG+GGG + chr6_4:20989548-20989567 None:intergenic 35.0%
AGACATAACACTTAAGAAGC+TGG + chr6_4:20989581-20989600 None:intergenic 35.0%
TGCACATTCCATTCAATGAA+CGG + chr6_4:20989688-20989707 None:intergenic 35.0%
TGTTACTGATCACACAATCA+TGG - chr6_4:20989973-20989992 Msa0981450:intron 35.0%
TGAGTCATACTACAAAAGCA+GGG + chr6_4:20990002-20990021 None:intergenic 35.0%
TTGAGATTATGACCAAGATC+AGG + chr6_4:20990050-20990069 None:intergenic 35.0%
CACTAGACATAATTTACAGC+CGG - chr6_4:20990154-20990173 Msa0981450:intron 35.0%
TATCGTGATGGTTTAGCTAA+TGG - chr6_4:20990418-20990437 Msa0981450:CDS 35.0%
!! TTAGCAGATTTTAATGCAGG+AGG - chr6_4:20990550-20990569 Msa0981450:CDS 35.0%
TCCTAGGAATTCAAAACCTT+TGG - chr6_4:20990719-20990738 Msa0981450:intron 35.0%
!!! TCCAAAGGTTTTGAATTCCT+AGG + chr6_4:20990723-20990742 None:intergenic 35.0%
! AATCTTTGTCTTGGTTCTCA+TGG - chr6_4:20990890-20990909 Msa0981450:intron 35.0%
! ATCTTTGTCTTGGTTCTCAT+GGG - chr6_4:20990891-20990910 Msa0981450:intron 35.0%
ACCCAGCTTATACTACTTAT+AGG + chr6_4:20990930-20990949 None:intergenic 35.0%
!! GGCTGAAAAGGTATCATATT+TGG - chr6_4:20990957-20990976 Msa0981450:CDS 35.0%
! CAGCTTTATCATATGTGGAA+TGG - chr6_4:20991072-20991091 Msa0981450:CDS 35.0%
TAAGAATGTTGTCTTTCCCA+GGG + chr6_4:20991282-20991301 None:intergenic 35.0%
GGAAAGACAACATTCTTACT+TGG - chr6_4:20991284-20991303 Msa0981450:intron 35.0%
! AACATGTTGCTTGAAAGATC+CGG + chr6_4:20991390-20991409 None:intergenic 35.0%
! TTTTCTCATATTGGTGGGAA+TGG - chr6_4:20991408-20991427 Msa0981450:intron 35.0%
GAAGTTTCTCATTCGTTCAT+TGG + chr6_4:20991535-20991554 None:intergenic 35.0%
AAACAATTTGAACTCGACCT+AGG - chr6_4:20991597-20991616 Msa0981450:intron 35.0%
GATAGCGAGAAATACTTGTT+GGG + chr6_4:20991675-20991694 None:intergenic 35.0%
AGATAGCGAGAAATACTTGT+TGG + chr6_4:20991676-20991695 None:intergenic 35.0%
CACAGGCAAGTAAAAAGTAA+AGG + chr6_4:20991847-20991866 None:intergenic 35.0%
CTCCTAGGAAAATCTGTTTA+AGG + chr6_4:20991912-20991931 None:intergenic 35.0%
AGTAAAGCGTGCAAATTCTT+TGG - chr6_4:20991930-20991949 Msa0981450:intron 35.0%
TTGCAGAACAAGTGTAATGT+TGG - chr6_4:20992176-20992195 Msa0981450:CDS 35.0%
TTCATCAACATGATTGATCC+TGG - chr6_4:20992206-20992225 Msa0981450:CDS 35.0%
TGGAATGGAATTATTTGACC+AGG + chr6_4:20992227-20992246 None:intergenic 35.0%
TCAAATAATTCCATTCCACC+AGG - chr6_4:20992229-20992248 Msa0981450:CDS 35.0%
! AGTTAATCTGTTTCTTGTGC+AGG - chr6_4:20992310-20992329 Msa0981450:five_prime_UTR 35.0%
! AGGCTTTTCATGGGAAAAAA+TGG - chr6_4:20992330-20992349 Msa0981450:intron 35.0%
! GGCTTTTCATGGGAAAAAAT+GGG - chr6_4:20992331-20992350 Msa0981450:intron 35.0%
GGAGAAGTTTAACAGTGAAA+AGG - chr6_4:20992352-20992371 Msa0981450:intron 35.0%
! AGCAGATTTTCCTTGAATTC+GGG + chr6_4:20992396-20992415 None:intergenic 35.0%
! GAGCAGATTTTCCTTGAATT+CGG + chr6_4:20992397-20992416 None:intergenic 35.0%
CCATCTGTATGGAATAGAAT+AGG + chr6_4:20992473-20992492 None:intergenic 35.0%
CCTATTCTATTCCATACAGA+TGG - chr6_4:20992470-20992489 Msa0981450:intron 35.0%
GATATCTGTCAGAAGAATGT+CGG + chr6_4:20992576-20992595 None:intergenic 35.0%
GATATCATGCTTCGTATTTC+TGG - chr6_4:20992590-20992609 Msa0981450:intron 35.0%
TGTAACTACTAGCATTGTAC+AGG + chr6_4:20992649-20992668 None:intergenic 35.0%
ACTCTAATATTTGCACCCAA+GGG + chr6_4:20992893-20992912 None:intergenic 35.0%
TACTCTAATATTTGCACCCA+AGG + chr6_4:20992894-20992913 None:intergenic 35.0%
TGGGTGCAAATATTAGAGTA+AGG - chr6_4:20992894-20992913 Msa0981450:intron 35.0%
TGCAAATATTAGAGTAAGGC+CGG - chr6_4:20992898-20992917 Msa0981450:intron 35.0%
TTGAAGAATTCCCTTGACTA+CGG + chr6_4:20992955-20992974 None:intergenic 35.0%
TCAAGGGAATTCTTCAACTT+TGG - chr6_4:20992958-20992977 Msa0981450:intron 35.0%
TCGACCTTCAAAAACTTTCA+AGG + chr6_4:20993196-20993215 None:intergenic 35.0%
!! TTGAAAGTTTTTGAAGGTCG+AGG - chr6_4:20993195-20993214 Msa0981450:five_prime_UTR 35.0%
GTCTCTCTAAACTTGTAAGA+TGG + chr6_4:20993294-20993313 None:intergenic 35.0%
ATAGTGCATTGTGTGTTTCA+AGG - chr6_4:20993376-20993395 Msa0981450:five_prime_UTR 35.0%
TAGTGCATTGTGTGTTTCAA+GGG - chr6_4:20993377-20993396 Msa0981450:five_prime_UTR 35.0%
CTATATGTTGGGATTGTTGA+AGG - chr6_4:20993496-20993515 Msa0981450:five_prime_UTR 35.0%
! AAAAGGAGGTGTGTGTTAGT+TGG + chr6_4:20985662-20985681 None:intergenic 40.0%
TCAGACAAAGAGAAGAAGAG+AGG + chr6_4:20985747-20985766 None:intergenic 40.0%
AGAGAAAATGGGAAGAGTAG+AGG + chr6_4:20985831-20985850 None:intergenic 40.0%
GAGGTTGAAGAGAGAGAAAA+TGG + chr6_4:20985843-20985862 None:intergenic 40.0%
ATTGCAATGTGGAAGGAACA+AGG - chr6_4:20985956-20985975 Msa0981450:three_prime_UTR 40.0%
! GGAAGGAACAAGGTTTTTGT+TGG - chr6_4:20985966-20985985 Msa0981450:three_prime_UTR 40.0%
CAAAAACCGTCTACAGCATA+AGG + chr6_4:20986025-20986044 None:intergenic 40.0%
!! GTCCATTTGGGTTTTTGATC+AGG - chr6_4:20986209-20986228 Msa0981450:CDS 40.0%
! ATTTTGCGATAGAACCGATG+TGG - chr6_4:20986366-20986385 Msa0981450:intron 40.0%
CTAAACACTACCAGAAGGAA+AGG + chr6_4:20986549-20986568 None:intergenic 40.0%
!! GTATGGGTTGATGTTAGTAG+AGG - chr6_4:20986706-20986725 Msa0981450:CDS 40.0%
CAAGGTCACATGCTTGAAAA+AGG + chr6_4:20986821-20986840 None:intergenic 40.0%
TTCAACAAAGCTAGCAAGTG+AGG - chr6_4:20986870-20986889 Msa0981450:intron 40.0%
TGATGTTTCCTATGCTTCTG+AGG - chr6_4:20987002-20987021 Msa0981450:intron 40.0%
AGTACATGAGATCGAGAAGT+CGG + chr6_4:20987114-20987133 None:intergenic 40.0%
TTTCATGTGCAGAGGAATGT+TGG - chr6_4:20987184-20987203 Msa0981450:intron 40.0%
TGCAGAGGAATGTTGGATTA+AGG - chr6_4:20987191-20987210 Msa0981450:intron 40.0%
TGATGATTATCCACAAGGTG+AGG - chr6_4:20987231-20987250 Msa0981450:intron 40.0%
TAGAGTCCTATATGTCATGC+TGG - chr6_4:20987278-20987297 Msa0981450:intron 40.0%
AGGAAACCAGCATGACATAT+AGG + chr6_4:20987287-20987306 None:intergenic 40.0%
!! AACTAGAGAGGTATCAGGTA+AGG + chr6_4:20987472-20987491 None:intergenic 40.0%
!! TGTCACAGACTAGTTTATCC+GGG - chr6_4:20988016-20988035 Msa0981450:CDS 40.0%
TGAATTATCACCCGAGATCA+TGG - chr6_4:20988112-20988131 Msa0981450:CDS 40.0%
AAACCATATGAGCTAGATGC+TGG + chr6_4:20988156-20988175 None:intergenic 40.0%
AACAAGATTGTCACCAATGC+AGG - chr6_4:20988183-20988202 Msa0981450:intron 40.0%
!! AAAAGTTCCCTTTTCTGGTG+GGG + chr6_4:20988421-20988440 None:intergenic 40.0%
!! GAAAAGTTCCCTTTTCTGGT+GGG + chr6_4:20988422-20988441 None:intergenic 40.0%
! AGAAAAGTTCCCTTTTCTGG+TGG + chr6_4:20988423-20988442 None:intergenic 40.0%
CACCCAATCTCAGAGATATA+TGG + chr6_4:20988478-20988497 None:intergenic 40.0%
GGGTGTTTGTATGCATATCT+TGG - chr6_4:20988493-20988512 Msa0981450:intron 40.0%
GATTTGTATGGTTCTTCCTC+AGG + chr6_4:20988580-20988599 None:intergenic 40.0%
GAAATTGAGGCTGACACTAT+AGG - chr6_4:20988607-20988626 Msa0981450:intron 40.0%
AATTGAGGCTGACACTATAG+GGG - chr6_4:20988609-20988628 Msa0981450:intron 40.0%
GAAAACAGATCATCTTCGTC+GGG + chr6_4:20988643-20988662 None:intergenic 40.0%
GGAAAACAGATCATCTTCGT+CGG + chr6_4:20988644-20988663 None:intergenic 40.0%
! GACGAAGATGATCTGTTTTC+CGG - chr6_4:20988643-20988662 Msa0981450:CDS 40.0%
TCCTAAACCATCATTGACAC+CGG + chr6_4:20988665-20988684 None:intergenic 40.0%
!! TTTGATTTGTTCAGCAGTGG+TGG - chr6_4:20988724-20988743 Msa0981450:CDS 40.0%
TTGGAAGGAGATGAACTTTC+AGG - chr6_4:20988757-20988776 Msa0981450:CDS 40.0%
AGGAAAAAGAATCAGTGGCT+TGG - chr6_4:20988777-20988796 Msa0981450:CDS 40.0%
! AAAAGAATCAGTGGCTTGGA+TGG - chr6_4:20988781-20988800 Msa0981450:CDS 40.0%
TACAGCGGTAGATGCTATAT+AGG - chr6_4:20988952-20988971 Msa0981450:CDS 40.0%
TTCGGATATCTCCATATTGC+TGG + chr6_4:20989042-20989061 None:intergenic 40.0%
ATGCTTGGAGGCAGTATAAA+GGG + chr6_4:20989065-20989084 None:intergenic 40.0%
!! GACATTGAGTTCTAGGAAAC+TGG - chr6_4:20989156-20989175 Msa0981450:CDS 40.0%
TTAGGGAAATCCTACAGAGA+AGG - chr6_4:20989398-20989417 Msa0981450:intron 40.0%
CAGATATCATCAGTGTACCA+TGG + chr6_4:20989431-20989450 None:intergenic 40.0%
CATGGTACACTGATGATATC+TGG - chr6_4:20989429-20989448 Msa0981450:intron 40.0%
GATATACAAGCACCAAAAGG+GGG + chr6_4:20989547-20989566 None:intergenic 40.0%
TTGAATGGAATGTGCATTGC+TGG - chr6_4:20989692-20989711 Msa0981450:CDS 40.0%
GTCATCCTAGGATTGCAATA+TGG - chr6_4:20989738-20989757 Msa0981450:CDS 40.0%
ATCCTAGGATTGCAATATGG+TGG - chr6_4:20989741-20989760 Msa0981450:CDS 40.0%
CTGAGTCATACTACAAAAGC+AGG + chr6_4:20990003-20990022 None:intergenic 40.0%
TATGACTCAGCCATCTCAAA+AGG - chr6_4:20990013-20990032 Msa0981450:CDS 40.0%
ATGACTCAGCCATCTCAAAA+GGG - chr6_4:20990014-20990033 Msa0981450:CDS 40.0%
!! TCATCTTGTCCCTTTTGAGA+TGG + chr6_4:20990026-20990045 None:intergenic 40.0%
AATAACTCCAGACGATAGTC+CGG + chr6_4:20990176-20990195 None:intergenic 40.0%
!! GCATCTGCTGTAAAAGTATC+TGG - chr6_4:20990325-20990344 Msa0981450:CDS 40.0%
! AAAGAATGAGGGTGCAATCT+TGG + chr6_4:20990391-20990410 None:intergenic 40.0%
GATACTCAGGCAAAGAATGA+GGG + chr6_4:20990402-20990421 None:intergenic 40.0%
TGTGGATCCAGTTCCAATAT+TGG + chr6_4:20990482-20990501 None:intergenic 40.0%
ATTCAGGGAATGATCTCAAC+TGG - chr6_4:20990523-20990542 Msa0981450:CDS 40.0%
TTCAGGGAATGATCTCAACT+GGG - chr6_4:20990524-20990543 Msa0981450:CDS 40.0%
AACGTGCCTAAAAAGCTTCA+TGG - chr6_4:20990580-20990599 Msa0981450:CDS 40.0%
AAATGGCATCCTAGATTCCT+AGG - chr6_4:20990703-20990722 Msa0981450:intron 40.0%
ACTGTAACAGTAGAGTCCAA+AGG + chr6_4:20990738-20990757 None:intergenic 40.0%
! TCTTTGTCTTGGTTCTCATG+GGG - chr6_4:20990892-20990911 Msa0981450:intron 40.0%
AGTATAAGCTGGGTAGTAAG+AGG - chr6_4:20990936-20990955 Msa0981450:CDS 40.0%
CCAACGCCATTAACAAAAGA+TGG + chr6_4:20991150-20991169 None:intergenic 40.0%
! CCATCTTTTGTTAATGGCGT+TGG - chr6_4:20991147-20991166 Msa0981450:CDS 40.0%
TCACATATTGACCACCATGT+TGG - chr6_4:20991231-20991250 Msa0981450:CDS 40.0%
GTAAGAATGTTGTCTTTCCC+AGG + chr6_4:20991283-20991302 None:intergenic 40.0%
!! AATCTAAAACCAGGAGCATC+AGG + chr6_4:20991318-20991337 None:intergenic 40.0%
!!! TGATGCTCCTGGTTTTAGAT+TGG - chr6_4:20991317-20991336 Msa0981450:intron 40.0%
!!! GATGCTCCTGGTTTTAGATT+GGG - chr6_4:20991318-20991337 Msa0981450:intron 40.0%
! AGAGAACCCAATCTAAAACC+AGG + chr6_4:20991327-20991346 None:intergenic 40.0%
!!! GGTTTTAGATTGGGTTCTCT+AGG - chr6_4:20991327-20991346 Msa0981450:intron 40.0%
! CTAGGAAATGCAGGTTTTCA+TGG - chr6_4:20991345-20991364 Msa0981450:intron 40.0%
AACGATTTGACATCCAGTGT+TGG - chr6_4:20991432-20991451 Msa0981450:intron 40.0%
ACGATTTGACATCCAGTGTT+GGG - chr6_4:20991433-20991452 Msa0981450:intron 40.0%
AAGACATGTGACAACTGCTT+AGG + chr6_4:20991468-20991487 None:intergenic 40.0%
GCAAAAGAGCAAGACAAGAT+TGG + chr6_4:20991801-20991820 None:intergenic 40.0%
! TCTTGTCTTGCTCTTTTGCT+TGG - chr6_4:20991802-20991821 Msa0981450:intron 40.0%
AATTTGCACGCTTTACTCCT+AGG + chr6_4:20991927-20991946 None:intergenic 40.0%
ACAAGAGTTCTCAAGTAACC+TGG + chr6_4:20992250-20992269 None:intergenic 40.0%
! TTTCTTGTGCAGGCTTTTCA+TGG - chr6_4:20992320-20992339 Msa0981450:five_prime_UTR 40.0%
! TTCTTGTGCAGGCTTTTCAT+GGG - chr6_4:20992321-20992340 Msa0981450:intron 40.0%
CATTCATCAGGCTTGAATTC+TGG + chr6_4:20992433-20992452 None:intergenic 40.0%
CTGTATGGAATAGAATAGGG+CGG + chr6_4:20992469-20992488 None:intergenic 40.0%
GAATGTCGGTAATAAGCAGA+TGG + chr6_4:20992562-20992581 None:intergenic 40.0%
ATATTTGCACCCAAGGGAAA+AGG + chr6_4:20992887-20992906 None:intergenic 40.0%
GCAAATATTAGAGTAAGGCC+GGG - chr6_4:20992899-20992918 Msa0981450:intron 40.0%
! CCACTACTACGTAATTTTCC+CGG + chr6_4:20992920-20992939 None:intergenic 40.0%
TTCAACTTTGGCAAATGCAG+AGG - chr6_4:20992970-20992989 Msa0981450:intron 40.0%
TCAGTGTCTCTTGAAGAACT+TGG + chr6_4:20993022-20993041 None:intergenic 40.0%
CATTGAACTGTTAGTGCTTG+AGG + chr6_4:20993055-20993074 None:intergenic 40.0%
! ATACAATGACGGAGTTGACA+TGG + chr6_4:20993085-20993104 None:intergenic 40.0%
! GGAGCCTTGAAAGTTTTTGA+AGG - chr6_4:20993189-20993208 Msa0981450:five_prime_UTR 40.0%
CACACAATGCACTATCTCAA+GGG + chr6_4:20993371-20993390 None:intergenic 40.0%
ACACACAATGCACTATCTCA+AGG + chr6_4:20993372-20993391 None:intergenic 40.0%
TTGTTTGTATCCCTGAGCAT+TGG - chr6_4:20993453-20993472 Msa0981450:five_prime_UTR 40.0%
TATAAAGACGCCAATGCTCA+GGG + chr6_4:20993466-20993485 None:intergenic 40.0%
TATGTTGGGATTGTTGAAGG+AGG - chr6_4:20993499-20993518 Msa0981450:five_prime_UTR 40.0%
TTTGTGCTGTCCTTTCCTTC+TGG - chr6_4:20986536-20986555 Msa0981450:intron 45.0%
! CTTGGACTTTTCATGTGCAG+AGG - chr6_4:20987176-20987195 Msa0981450:intron 45.0%
AGTTGATTGACCTCACCTTG+TGG + chr6_4:20987244-20987263 None:intergenic 45.0%
! AACTTTTACTGTCGTTGCCC+AGG - chr6_4:20987525-20987544 Msa0981450:CDS 45.0%
!! GTCACAGACTAGTTTATCCG+GGG - chr6_4:20988017-20988036 Msa0981450:CDS 45.0%
!! GTACATTTTGGTGCACAAGC+TGG - chr6_4:20988054-20988073 Msa0981450:CDS 45.0%
AGATGCGCTGAAGGATTCAA+AGG - chr6_4:20988083-20988102 Msa0981450:CDS 45.0%
TGCACATCAGACCATGATCT+CGG + chr6_4:20988126-20988145 None:intergenic 45.0%
GATCATGGTCTGATGTGCAT+AGG - chr6_4:20988127-20988146 Msa0981450:intron 45.0%
! ATGCATATCTTGGTGCAGTG+AGG - chr6_4:20988503-20988522 Msa0981450:intron 45.0%
!! CTGTTTTCCGGTGTCAATGA+TGG - chr6_4:20988655-20988674 Msa0981450:CDS 45.0%
! TCCGGTGTCAATGATGGTTT+AGG - chr6_4:20988661-20988680 Msa0981450:CDS 45.0%
ATGGTGATCCTGCTTACTCT+GGG - chr6_4:20988800-20988819 Msa0981450:CDS 45.0%
TTAAAAGCCCCAGAGTAAGC+AGG + chr6_4:20988811-20988830 None:intergenic 45.0%
!!! GCTTACTCTGGGGCTTTTAA+AGG - chr6_4:20988811-20988830 Msa0981450:CDS 45.0%
TGCAGAAGACTCTGAGCTAA+AGG - chr6_4:20988894-20988913 Msa0981450:CDS 45.0%
TGAGCTAAAGGCTCTCTTTG+AGG - chr6_4:20988906-20988925 Msa0981450:CDS 45.0%
TGGAGGCAGTATAAAGGGTT+CGG + chr6_4:20989060-20989079 None:intergenic 45.0%
GATGCTTGGAGGCAGTATAA+AGG + chr6_4:20989066-20989085 None:intergenic 45.0%
CATAACAAACCCACGATGCT+TGG + chr6_4:20989080-20989099 None:intergenic 45.0%
! TTGCATTTTGTGCTGCCCTT+AGG + chr6_4:20989117-20989136 None:intergenic 45.0%
TGGCCAATATCCTTCTCTGT+AGG + chr6_4:20989411-20989430 None:intergenic 45.0%
ACAGAGAAGGATATTGGCCA+TGG - chr6_4:20989411-20989430 Msa0981450:intron 45.0%
GCTTCTCTCCGTTCATTGAA+TGG - chr6_4:20989677-20989696 Msa0981450:CDS 45.0%
AAGCAGATCAAGCTTGAACC+TGG - chr6_4:20989716-20989735 Msa0981450:CDS 45.0%
ATTGCAATCCTAGGATGACC+AGG + chr6_4:20989737-20989756 None:intergenic 45.0%
AGCCACCATATTGCAATCCT+AGG + chr6_4:20989746-20989765 None:intergenic 45.0%
GGACAAGATGAACCTGATCT+TGG - chr6_4:20990035-20990054 Msa0981450:CDS 45.0%
! TCGTCTGGAGTTATTGCATC+TGG - chr6_4:20990181-20990200 Msa0981450:intron 45.0%
! TCTGGAGTTATTGCATCTGG+TGG - chr6_4:20990184-20990203 Msa0981450:intron 45.0%
AGTATTTCCAACACCGCAAG+AGG - chr6_4:20990301-20990320 Msa0981450:CDS 45.0%
GTATTTCCAACACCGCAAGA+GGG - chr6_4:20990302-20990321 Msa0981450:CDS 45.0%
TATTTCCAACACCGCAAGAG+GGG - chr6_4:20990303-20990322 Msa0981450:CDS 45.0%
CGATACTCAGGCAAAGAATG+AGG + chr6_4:20990403-20990422 None:intergenic 45.0%
! TCTTTGCCTGAGTATCGTGA+TGG - chr6_4:20990406-20990425 Msa0981450:CDS 45.0%
GCTAAACCATCACGATACTC+AGG + chr6_4:20990415-20990434 None:intergenic 45.0%
ATGGCTGCCAATATTGGAAC+TGG - chr6_4:20990472-20990491 Msa0981450:CDS 45.0%
ATCTGATGGCAGGCATATTC+AGG - chr6_4:20990507-20990526 Msa0981450:CDS 45.0%
TCTGATGGCAGGCATATTCA+GGG - chr6_4:20990508-20990527 Msa0981450:CDS 45.0%
CTTTCCCTGTCATAGAGACA+AGG + chr6_4:20990643-20990662 None:intergenic 45.0%
TGGGTAGTAAGAGGCTGAAA+AGG - chr6_4:20990945-20990964 Msa0981450:CDS 45.0%
!! GATAAAGCTGATGATGGGGA+AGG + chr6_4:20991062-20991081 None:intergenic 45.0%
GCAATCTCCATCAAATGCTG+TGG - chr6_4:20991110-20991129 Msa0981450:CDS 45.0%
CTCCATCAAATGCTGTGGTT+TGG - chr6_4:20991115-20991134 Msa0981450:CDS 45.0%
TGCCAAACCACAGCATTTGA+TGG + chr6_4:20991120-20991139 None:intergenic 45.0%
TGGATCAGCACCAGTTGTTA+CGG - chr6_4:20991251-20991270 Msa0981450:intron 45.0%
! TTGGGTTCTCTAGGAAATGC+AGG - chr6_4:20991336-20991355 Msa0981450:intron 45.0%
! ATGCAGGTTTTCATGGTAGC+TGG - chr6_4:20991352-20991371 Msa0981450:intron 45.0%
! ATGTTGCTTGAAAGATCCGG+AGG + chr6_4:20991387-20991406 None:intergenic 45.0%
AGTTGTCACATGTCTTCCCT+GGG - chr6_4:20991472-20991491 Msa0981450:intron 45.0%
CAGCCATAGATGAGAGTTGT+CGG - chr6_4:20992032-20992051 Msa0981450:intron 45.0%
AGCCATAGATGAGAGTTGTC+GGG - chr6_4:20992033-20992052 Msa0981450:intron 45.0%
TCTCAAGTAACCTGGTGGAA+TGG + chr6_4:20992242-20992261 None:intergenic 45.0%
AGAGTTCTCAAGTAACCTGG+TGG + chr6_4:20992247-20992266 None:intergenic 45.0%
CTTGCATATGCCCGAATTCA+AGG - chr6_4:20992383-20992402 Msa0981450:intron 45.0%
CAGCATTTGGACCATCTGTA+TGG + chr6_4:20992484-20992503 None:intergenic 45.0%
CATACAGATGGTCCAAATGC+TGG - chr6_4:20992482-20992501 Msa0981450:intron 45.0%
TTTACCGGATCACCAGCATT+TGG + chr6_4:20992497-20992516 None:intergenic 45.0%
AAGCAGATGGAGATAGCAAC+AGG + chr6_4:20992549-20992568 None:intergenic 45.0%
CCGGGAAAATTACGTAGTAG+TGG - chr6_4:20992917-20992936 Msa0981450:intron 45.0%
ATTACGTAGTAGTGGCAACG+AGG - chr6_4:20992925-20992944 Msa0981450:intron 45.0%
AATGCAGAGGAGTTTGCAAG+TGG - chr6_4:20992983-20993002 Msa0981450:intron 45.0%
TGTGTGAGAGAGAGAAGAGT+TGG - chr6_4:20993122-20993141 Msa0981450:five_prime_UTR 45.0%
! GAAACGAGGGCTCACAATTT+TGG - chr6_4:20993157-20993176 Msa0981450:five_prime_UTR 45.0%
TGAAGGTCGAGGTACATAAC+TGG - chr6_4:20993206-20993225 Msa0981450:five_prime_UTR 45.0%
CTATAAAGACGCCAATGCTC+AGG + chr6_4:20993467-20993486 None:intergenic 45.0%
!! CTGAGCATTGGCGTCTTTAT+AGG - chr6_4:20993465-20993484 Msa0981450:five_prime_UTR 45.0%
!!! TATTATTTATATTGATTAAT+TGG - chr6_4:20991880-20991899 Msa0981450:intron 5.0%
AAACCAAACCAGAGAGCGAC+CGG - chr6_4:20985777-20985796 Msa0981450:three_prime_UTR 50.0%
GAAGAGTAGAGGCGAATCTC+CGG + chr6_4:20985820-20985839 None:intergenic 50.0%
AAGCAGTAGTAACACCCCTC+TGG + chr6_4:20986966-20986985 None:intergenic 50.0%
TTTACTGTCGTTGCCCAGGA+TGG - chr6_4:20987529-20987548 Msa0981450:CDS 50.0%
AGTGAAATGGCAGCTTCACC+TGG - chr6_4:20987937-20987956 Msa0981450:CDS 50.0%
GAAGTGTGCAAAATGCCTCC+AGG + chr6_4:20987958-20987977 None:intergenic 50.0%
!! TTTTGGTGCACAAGCTGGCA+TGG - chr6_4:20988059-20988078 Msa0981450:CDS 50.0%
GCACATCAGACCATGATCTC+GGG + chr6_4:20988125-20988144 None:intergenic 50.0%
! CAGCCAGCATCTAGCTCATA+TGG - chr6_4:20988150-20988169 Msa0981450:intron 50.0%
! TCTTGGTGCAGTGAGGTTCT+TGG - chr6_4:20988510-20988529 Msa0981450:intron 50.0%
! CTTGGTGCAGTGAGGTTCTT+GGG - chr6_4:20988511-20988530 Msa0981450:intron 50.0%
GCAGTGAGGTTCTTGGGAAA+TGG - chr6_4:20988517-20988536 Msa0981450:intron 50.0%
!! TACTGCTGGTTCTCTTCCTG+AGG - chr6_4:20988561-20988580 Msa0981450:intron 50.0%
ACAGATCATCTTCGTCGGGA+AGG + chr6_4:20988639-20988658 None:intergenic 50.0%
! GATTTGTTCAGCAGTGGTGG+AGG - chr6_4:20988727-20988746 Msa0981450:CDS 50.0%
GATGGTGATCCTGCTTACTC+TGG - chr6_4:20988799-20988818 Msa0981450:CDS 50.0%
TGGTGATCCTGCTTACTCTG+GGG - chr6_4:20988801-20988820 Msa0981450:CDS 50.0%
! TATACTGCCTCCAAGCATCG+TGG - chr6_4:20989067-20989086 Msa0981450:intron 50.0%
! ATACTGCCTCCAAGCATCGT+GGG - chr6_4:20989068-20989087 Msa0981450:intron 50.0%
AACAAACCCACGATGCTTGG+AGG + chr6_4:20989077-20989096 None:intergenic 50.0%
!!! TGTTGGTTTTCGCCCCCTTT+TGG - chr6_4:20989532-20989551 Msa0981450:CDS 50.0%
AGCTTGAACCTGGTCATCCT+AGG - chr6_4:20989726-20989745 Msa0981450:CDS 50.0%
TTTACAGCCGGACTATCGTC+TGG - chr6_4:20990166-20990185 Msa0981450:intron 50.0%
GGAGTTATTGCATCTGGTGG+AGG - chr6_4:20990187-20990206 Msa0981450:intron 50.0%
TATTGCATCTGGTGGAGGCT+TGG - chr6_4:20990192-20990211 Msa0981450:intron 50.0%
TCTGGTGGAGGCTTGGAAAA+TGG - chr6_4:20990199-20990218 Msa0981450:intron 50.0%
AAGGCAGCTGTGATGCAGAT+AGG + chr6_4:20990240-20990259 None:intergenic 50.0%
!! GGATCCACAGAAGCATCTGA+TGG - chr6_4:20990493-20990512 Msa0981450:CDS 50.0%
!! GTTAATGGCGTTGGTTCTCC+TGG - chr6_4:20991156-20991175 Msa0981450:CDS 50.0%
GATGCTCTCAGCATATGAGC+CGG + chr6_4:20991213-20991232 None:intergenic 50.0%
!! CAACTGGTGCTGATCCAACA+TGG + chr6_4:20991248-20991267 None:intergenic 50.0%
GGATCAGCACCAGTTGTTAC+GGG - chr6_4:20991252-20991271 Msa0981450:intron 50.0%
AGTTGTTACGGGATCACCCT+GGG - chr6_4:20991263-20991282 Msa0981450:intron 50.0%
! TTGACATCCAGTGTTGGGCA+TGG - chr6_4:20991438-20991457 Msa0981450:intron 50.0%
CAGTTGTCACATGTCTTCCC+TGG - chr6_4:20991471-20991490 Msa0981450:intron 50.0%
AAGTCATGGGAAGTCTCCCA+GGG + chr6_4:20991491-20991510 None:intergenic 50.0%
GCCATAGATGAGAGTTGTCG+GGG - chr6_4:20992034-20992053 Msa0981450:intron 50.0%
TCCCCGACAACTCTCATCTA+TGG + chr6_4:20992038-20992057 None:intergenic 50.0%
TGGTCCAAATGCTGGTGATC+CGG - chr6_4:20992490-20992509 Msa0981450:intron 50.0%
!! GGTCGCTCTCTGGTTTGGTT+TGG + chr6_4:20985778-20985797 None:intergenic 55.0%
GAAATGGCAGCTTCACCTGG+AGG - chr6_4:20987940-20987959 Msa0981450:CDS 55.0%
TGGCATGGTAGATGCGCTGA+AGG - chr6_4:20988074-20988093 Msa0981450:CDS 55.0%
GCCAGAACCCCACCAGAAAA+GGG - chr6_4:20988411-20988430 Msa0981450:intron 55.0%
!! TCCCTTTTCTGGTGGGGTTC+TGG + chr6_4:20988415-20988434 None:intergenic 55.0%
TACAGCAGATGCCCCTCTTG+CGG + chr6_4:20990317-20990336 None:intergenic 55.0%
CCTGCCATCAGATGCTTCTG+TGG + chr6_4:20990500-20990519 None:intergenic 55.0%
!! CCACAGAAGCATCTGATGGC+AGG - chr6_4:20990497-20990516 Msa0981450:CDS 55.0%
CTAGGCATCTGAGGAAGACC+AGG + chr6_4:20991177-20991196 None:intergenic 55.0%
CTGGGAAAGCTAGGCATCTG+AGG + chr6_4:20991186-20991205 None:intergenic 55.0%
! CTCAGATGCCTAGCTTTCCC+AGG - chr6_4:20991184-20991203 Msa0981450:CDS 55.0%
AGCATATGAGCCGGTGTCCT+GGG + chr6_4:20991204-20991223 None:intergenic 55.0%
!! CTGGTGCTGATCCAACATGG+TGG + chr6_4:20991245-20991264 None:intergenic 55.0%
CAGGGTGATCCCGTAACAAC+TGG + chr6_4:20991264-20991283 None:intergenic 55.0%
CAGTTGTTACGGGATCACCC+TGG - chr6_4:20991262-20991281 Msa0981450:intron 55.0%
TAGCTGGCAGTTGCATCCTC+CGG - chr6_4:20991368-20991387 Msa0981450:intron 55.0%
GAAGTCATGGGAAGTCTCCC+AGG + chr6_4:20991492-20991511 None:intergenic 55.0%
TGTCTTCCCCACGCGATATG+CGG + chr6_4:20991623-20991642 None:intergenic 55.0%
! GTGCAGGAGCCTTTTCCCTT+GGG - chr6_4:20992875-20992894 Msa0981450:intron 55.0%
AACGAGGAGAGCCGTAGTCA+AGG - chr6_4:20992941-20992960 Msa0981450:intron 55.0%
ACGAGGAGAGCCGTAGTCAA+GGG - chr6_4:20992942-20992961 Msa0981450:intron 55.0%
GAGAGAAGAGTTGGAGCAGC+CGG - chr6_4:20993131-20993150 Msa0981450:five_prime_UTR 55.0%
TGTGAGCCCTCGTTTCCTAC+CGG + chr6_4:20993153-20993172 None:intergenic 55.0%
GGCGAGGTTGTTATGCTCGC+CGG + chr6_4:20985799-20985818 None:intergenic 60.0%
GGCGAGCATAACAACCTCGC+CGG - chr6_4:20985798-20985817 Msa0981450:three_prime_UTR 60.0%
GCTTTCACGTGCGCCTGCAT+TGG + chr6_4:20988199-20988218 None:intergenic 60.0%
CGCCAGAACCCCACCAGAAA+AGG - chr6_4:20988410-20988429 Msa0981450:intron 60.0%
! GTTCAGCAGTGGTGGAGGCA+TGG - chr6_4:20988732-20988751 Msa0981450:CDS 60.0%
! CAGTGGTGGAGGCATGGAGT+TGG - chr6_4:20988738-20988757 Msa0981450:CDS 60.0%
! GGTGGAGGCATGGAGTTGGA+AGG - chr6_4:20988742-20988761 Msa0981450:CDS 60.0%
AGATGCCCCTCTTGCGGTGT+TGG + chr6_4:20990311-20990330 None:intergenic 60.0%
! GCCTAGCTTTCCCAGGACAC+CGG - chr6_4:20991191-20991210 Msa0981450:CDS 60.0%
CAGCATATGAGCCGGTGTCC+TGG + chr6_4:20991205-20991224 None:intergenic 60.0%
GGAGAGTCTCCTGATGCTCC+TGG - chr6_4:20991306-20991325 Msa0981450:intron 60.0%
AGGAGAGCCATGCCCAACAC+TGG + chr6_4:20991448-20991467 None:intergenic 60.0%
ACCTAGGCCGCATATCGCGT+GGG - chr6_4:20991613-20991632 Msa0981450:intron 60.0%
! CGTGCAGGAGCCTTTTCCCT+TGG - chr6_4:20992874-20992893 Msa0981450:intron 60.0%
GAAGAGTTGGAGCAGCCGGT+AGG - chr6_4:20993135-20993154 Msa0981450:five_prime_UTR 60.0%
GAGCAGCCGGTAGGAAACGA+GGG - chr6_4:20993144-20993163 Msa0981450:five_prime_UTR 60.0%
TCGCCGGTCGCTCTCTGGTT+TGG + chr6_4:20985783-20985802 None:intergenic 65.0%
TATGCTCGCCGGTCGCTCTC+TGG + chr6_4:20985788-20985807 None:intergenic 65.0%
GTAGAGGCGAATCTCCGGCG+AGG + chr6_4:20985815-20985834 None:intergenic 65.0%
CGAACGTGTGTGGGGGTGGT+GGG + chr6_4:20988384-20988403 None:intergenic 65.0%
GCCGGTGTCCTGGGAAAGCT+AGG + chr6_4:20991195-20991214 None:intergenic 65.0%
GACCTAGGCCGCATATCGCG+TGG - chr6_4:20991612-20991631 Msa0981450:intron 65.0%
CCTAGGCCGCATATCGCGTG+GGG - chr6_4:20991614-20991633 Msa0981450:intron 65.0%
GGAGCAGCCGGTAGGAAACG+AGG - chr6_4:20993143-20993162 Msa0981450:five_prime_UTR 65.0%
GCGAACGTGTGTGGGGGTGG+TGG + chr6_4:20988385-20988404 None:intergenic 70.0%
CGTGCGAACGTGTGTGGGGG+TGG + chr6_4:20988388-20988407 None:intergenic 70.0%
GCGCGTGCGAACGTGTGTGG+GGG + chr6_4:20988391-20988410 None:intergenic 70.0%
CGCGCGTGCGAACGTGTGTG+GGG + chr6_4:20988392-20988411 None:intergenic 70.0%
GCGCGCGTGCGAACGTGTGT+GGG + chr6_4:20988393-20988412 None:intergenic 70.0%
CCCCACGCGATATGCGGCCT+AGG + chr6_4:20991617-20991636 None:intergenic 70.0%
GGCGCGCGTGCGAACGTGTG+TGG + chr6_4:20988394-20988413 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 20985638 20993555 20985638 ID=Msa0981450;Name=Msa0981450
chr6_4 mRNA 20985638 20993555 20985638 ID=Msa0981450-mRNA-1;Parent=Msa0981450;Name=Msa0981450-mRNA-1;_AED=0.11;_eAED=0.11;_QI=601|1|1|1|0.92|0.86|15|510|968
chr6_4 exon 20985638 20986312 20985638 ID=Msa0981450-mRNA-1:exon:6439;Parent=Msa0981450-mRNA-1
chr6_4 exon 20986682 20986861 20986682 ID=Msa0981450-mRNA-1:exon:6438;Parent=Msa0981450-mRNA-1
chr6_4 exon 20986943 20987011 20986943 ID=Msa0981450-mRNA-1:exon:6437;Parent=Msa0981450-mRNA-1
chr6_4 exon 20987100 20987184 20987100 ID=Msa0981450-mRNA-1:exon:6436;Parent=Msa0981450-mRNA-1
chr6_4 exon 20987514 20988144 20987514 ID=Msa0981450-mRNA-1:exon:6435;Parent=Msa0981450-mRNA-1
chr6_4 exon 20988622 20989020 20988622 ID=Msa0981450-mRNA-1:exon:6434;Parent=Msa0981450-mRNA-1
chr6_4 exon 20989098 20989180 20989098 ID=Msa0981450-mRNA-1:exon:6433;Parent=Msa0981450-mRNA-1
chr6_4 exon 20989434 20989582 20989434 ID=Msa0981450-mRNA-1:exon:6432;Parent=Msa0981450-mRNA-1
chr6_4 exon 20989675 20989791 20989675 ID=Msa0981450-mRNA-1:exon:6431;Parent=Msa0981450-mRNA-1
chr6_4 exon 20989992 20990150 20989992 ID=Msa0981450-mRNA-1:exon:6430;Parent=Msa0981450-mRNA-1
chr6_4 exon 20990266 20990672 20990266 ID=Msa0981450-mRNA-1:exon:6429;Parent=Msa0981450-mRNA-1
chr6_4 exon 20990932 20991261 20990932 ID=Msa0981450-mRNA-1:exon:6428;Parent=Msa0981450-mRNA-1
chr6_4 exon 20991946 20991997 20991946 ID=Msa0981450-mRNA-1:exon:6427;Parent=Msa0981450-mRNA-1
chr6_4 exon 20992170 20992339 20992170 ID=Msa0981450-mRNA-1:exon:6426;Parent=Msa0981450-mRNA-1
chr6_4 exon 20993044 20993555 20993044 ID=Msa0981450-mRNA-1:exon:6425;Parent=Msa0981450-mRNA-1
chr6_4 five_prime_UTR 20993044 20993555 20993044 ID=Msa0981450-mRNA-1:five_prime_utr;Parent=Msa0981450-mRNA-1
chr6_4 five_prime_UTR 20992251 20992339 20992251 ID=Msa0981450-mRNA-1:five_prime_utr;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20992170 20992250 20992170 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20991946 20991997 20991946 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20990932 20991261 20990932 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20990266 20990672 20990266 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20989992 20990150 20989992 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20989675 20989791 20989675 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20989434 20989582 20989434 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20989098 20989180 20989098 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20988622 20989020 20988622 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20987514 20988144 20987514 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20987100 20987184 20987100 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20986943 20987011 20986943 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20986682 20986861 20986682 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 CDS 20986148 20986312 20986148 ID=Msa0981450-mRNA-1:cds;Parent=Msa0981450-mRNA-1
chr6_4 three_prime_UTR 20985638 20986147 20985638 ID=Msa0981450-mRNA-1:three_prime_utr;Parent=Msa0981450-mRNA-1
Gene Sequence

>Msa0981450

ATGCCTTTTGAAATAATGAACCAGAGGGGTGTTACTACTGCTTCATCCCATCTTTATGATGATGTTTCCTATGCTTCTGAGAGGAATGTTGGATTAAGGAAGCCAAAATCTATTCATGATGATTATCCACAAGGGAAGAGTGAAATGGCAGCTTCACCTGGAGGCATTTTGCACACTTCATCAACCCTCGAAAGAAATGCAAAAATAGGCTTGCCAATGTCACAGACTAGTTTATCCGGGGAAGTTTTAGAAAACGTACATTTTGGTGCACAAGCTGGCATGGTAGATGCGCTGAAGGATTCAAAGGAATCTTTGAATTATCACCCGAGATCATGGTCTGATGTGCATAGGCAGCCAGCATCTAGCTCATATGGTTTAATTGGGAACAAGATTGTCACCAATGCAGGCGCACGTGAAAGCAGTCTATTCTCAAGCTCACTGTCCGATATGTTTAGCCAAAAGTTGAGGTTCTTGGGAAATGGTGTTCAGTCTGATCAGAATATTACTGCTGGTTCTCTTCCTGAGGAAGAACCATACAAATCTCTTGAAGAAATTGAGGCTGACACTATAGGGGATCTCCTTCCCGACGAAGATGATCTGTTTTCCGGTGTCAATGATGGTTTAGGAAGCAGTGCTCATGCTAGAGCAAGTGATGATTTTGAAGATTTTGATTTGTTCAGCAGTGGTGGAGGCATGGAGTTGGAAGGAGATGAACTTTCAGGAAAAAGAATCAGTGGCTTGGATGGTGATCCTGCTTACTCTGGGGCTTTTAAAGGCAAAAGTTCTTTTGGTGAACAATCTTCTAGAACACTTTTTGTTGGAAACATTACTAGCAATGCAGAAGACTCTGAGCTAAAGGCTCTCTTTGAGCAATATGGAGATATCCGAACCCTTTATACTGCCTCCAAGCATCGTGGGTTTGTTATGATTTCTTACTATGACCTAAGGGCAGCACAAAATGCAATGAAAGCACTTCAAAATAGGACATTGAGTTCTAGGAAACTGGATATACGTTATTCAATTCCAAAGGGAAATCCTACAGAGAAGGATATTGGCCATGGTACACTGATGATATCTGGTCTTGATTCATCTGTTTTGAAAGACGAACTAAAACGTATTTTTGGATTTTATGGAGAAATCAAAGAGATCTATGAATATCCAGAGATGAATCATATCAAATATATTGAATTTTATGATGTTCGAGGTGCAGAAGCTTCTCTCCGTTCATTGAATGGAATGTGCATTGCTGGAAAGCAGATCAAGCTTGAACCTGGTCATCCTAGGATTGCAATATGTATGACTCAGCCATCTCAAAAGGGACAAGATGAACCTGATCTTGGTCATAATCTCAATGACATCTTATTCTTAAGACAGAAGGCCGGACTATCGTCTGGAGTTATTGCATCTGGTGGAGGCTTGGAAAATGGATATAATCAAAGATTCCTATCTGCATCACAGCTGCCTTTGAATGCTTTCTTCGATAACACAAATTTTCACGTGAATTCTAGTATTTCCAACACCGCAAGAGGGGCATCTGCTGTAAAAGTATCTGGTGACTCCAGTAATGTTGATGCAATGAAATTTGCATCTATTCCAAGATTGCACCCTCATTCTTTGCCTGAGTATCGTGATGGTTTAGCTAATGGCAGTCCTTACAATTTGTCAAACACCATTAAAATGGCTGCCAATATTGGAACTGGATCCACAGAAGCATCTGATGGCAGGCATATTCAGGGAATGATCTCAACTGGGAACTTAGCAGATTTTAATGCAGGAGGAAATGGGAGCCTTCCCCATCATCAGCTTTATCATATGTGGAATGGCTCAAACTTGCGTCAGCAATCTCCATCAAATGCTGTGGTTTGGCAGAAAACGCCATCTTTTGTTAATGGCGTTGGTTCTCCTGGTCTTCCTCAGATGCCTAGCTTTCCCAGGACACCGGCTCATATGCTGAGAGCATCACATATTGACCACCATGTTGGATCAGCACCAGTTGTTACGGGATCACCCTGGGAAAGACAACATTCTTACTTGGGAGAGTCTCCTGATGCTCCTGGTTTTAGATTGGGTTCTCTAGGAAATGCAGGTTTTCATGGTAGCTGGCAGTTGCATCCTCCGGATCTTTCAAGCAACATGTTTTCTCATATTGGTGGGAATGGTAACGATTTGACATCCAGTGTTGGGCATGGCTCTCCTAAGCAGTTGTCACATGTCTTCCCTGGGAGACTTCCCATGACTTCAATGTCGAAATTTGATTCTACCAATGAACGAATGAGAAACTTCTATCATCGTAGAAGTGAAGCGAACAATAACAATGCTGATAAAAAACAATTTGAACTCGACCTAGGCCGCATATCGCGTGGGGAAGACAACCGAACAACGCTGATGATAAAAAATATTCCCAACAAGTATACTTCAAAGATGCTTCTTACAGCCATAGATGAGAGTTGTCGGGGAACTTATGATTTTCTGTATTTGCCAATTGATTTCAAAAACAAGTGTAATGTTGGCTATGCATTCATCAACATGATTGATCCTGGTCAAATAATTCCATTCCACCAGGCTTTTCATGGGAAAAAATGGGAGAAGTTTAACAGTGAAAAGGTAGCAGTACTTGCATATGCCCGAATTCAAGGAAAATCTGCTCTTATTGCTCATTTCCAGAATTCAAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTCTATTCCATACAGATGGTCCAAATGCTGGTGATCCGGAGCCTTTTCCCTTGGGTGCAAATATTAGAGTAAGGCCGGGAAAATTACGTAGTAGTGGCAACGAGGAGAGCCGTAGTCAAGGGAATTCTTCAACTTTGGCAAATGCAGAGGAGTTTGCAAGTGGAATAGATTCTTCACCAAGTTCTTCAAGAGACACTGACTGA
Protein sequence

>Msa0981450

MPFEIMNQRGVTTASSHLYDDVSYASERNVGLRKPKSIHDDYPQGKSEMAASPGGILHTSSTLERNAKIGLPMSQTSLSGEVLENVHFGAQAGMVDALKDSKESLNYHPRSWSDVHRQPASSSYGLIGNKIVTNAGARESSLFSSSLSDMFSQKLRFLGNGVQSDQNITAGSLPEEEPYKSLEEIEADTIGDLLPDEDDLFSGVNDGLGSSAHARASDDFEDFDLFSSGGGMELEGDELSGKRISGLDGDPAYSGAFKGKSSFGEQSSRTLFVGNITSNAEDSELKALFEQYGDIRTLYTASKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSSVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLRSLNGMCIAGKQIKLEPGHPRIAICMTQPSQKGQDEPDLGHNLNDILFLRQKAGLSSGVIASGGGLENGYNQRFLSASQLPLNAFFDNTNFHVNSSISNTARGASAVKVSGDSSNVDAMKFASIPRLHPHSLPEYRDGLANGSPYNLSNTIKMAANIGTGSTEASDGRHIQGMISTGNLADFNAGGNGSLPHHQLYHMWNGSNLRQQSPSNAVVWQKTPSFVNGVGSPGLPQMPSFPRTPAHMLRASHIDHHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHIGGNGNDLTSSVGHGSPKQLSHVFPGRLPMTSMSKFDSTNERMRNFYHRRSEANNNNADKKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYDFLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGANIRVRPGKLRSSGNEESRSQGNSSTLANAEEFASGIDSSPSSSRDTD*