AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0474720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474720 MtrunA17_Chr3g0131631 97.113 970 25 2 1 968 1 969 0.0 1933
Msa0474720 MtrunA17_Chr8g0385721 68.486 971 285 13 1 956 1 965 0.0 1273
Msa0474720 MtrunA17_Chr7g0221461 41.809 818 348 26 153 937 79 801 1.60e-170 518
Msa0474720 MtrunA17_Chr2g0304041 43.049 820 336 25 160 913 66 820 3.31e-158 488
Msa0474720 MtrunA17_Chr7g0276301 34.581 668 290 20 170 815 27 569 7.19e-88 292
Msa0474720 MtrunA17_Chr3g0096561 47.605 334 144 7 137 443 46 375 1.11e-74 263
Msa0474720 MtrunA17_Chr3g0096561 53.020 298 120 7 658 944 561 849 4.61e-74 261
Msa0474720 MtrunA17_Chr7g0276291 56.204 137 33 2 824 937 5 137 4.45e-42 150
Msa0474720 MtrunA17_Chr3g0123391 45.890 146 67 1 790 923 333 478 1.67e-34 139
Msa0474720 MtrunA17_Chr3g0123391 28.646 192 112 7 282 451 59 247 5.24e-15 79.3
Msa0474720 MtrunA17_Chr5g0428671 56.637 113 49 0 309 421 1 113 2.41e-34 127
Msa0474720 MtrunA17_Chr5g0423961 55.752 113 50 0 309 421 1 113 2.63e-34 127
Msa0474720 MtrunA17_Chr4g0035711 38.095 126 64 2 793 904 188 313 4.17e-17 84.0
Msa0474720 MtrunA17_Chr2g0288251 24.870 193 116 5 262 426 141 332 6.29e-12 68.9
Msa0474720 MtrunA17_Chr4g0074711 25.281 178 110 5 270 425 168 344 8.61e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474720 AT5G61960.3 46.782 979 430 23 1 958 1 909 0.0 687
Msa0474720 AT5G61960.1 46.782 979 430 23 1 958 1 909 0.0 687
Msa0474720 AT5G61960.10 46.782 979 430 23 1 958 1 909 0.0 687
Msa0474720 AT5G61960.2 46.782 979 430 23 1 958 1 909 0.0 687
Msa0474720 AT5G61960.7 50.354 848 380 17 132 958 75 902 0.0 680
Msa0474720 AT5G61960.4 50.354 848 380 17 132 958 75 902 0.0 680
Msa0474720 AT5G61960.8 50.354 848 380 17 132 958 75 902 0.0 680
Msa0474720 AT5G61960.11 50.354 848 380 17 132 958 75 902 0.0 680
Msa0474720 AT5G61960.6 50.354 848 380 17 132 958 75 902 0.0 680
Msa0474720 AT5G61960.9 50.354 848 380 17 132 958 75 902 0.0 680
Msa0474720 AT5G61960.5 50.354 848 380 17 132 958 75 902 0.0 680
Msa0474720 AT5G07290.1 49.116 792 368 17 187 959 131 906 0.0 650
Msa0474720 AT1G29400.1 46.847 333 150 6 114 427 2 326 1.55e-77 270
Msa0474720 AT1G29400.1 56.489 262 96 6 654 906 514 766 1.39e-71 254
Msa0474720 AT1G29400.2 46.847 333 150 6 114 427 2 326 1.55e-77 270
Msa0474720 AT1G29400.2 56.489 262 96 6 654 906 514 766 1.39e-71 254
Msa0474720 AT1G29400.3 46.847 333 150 6 114 427 2 326 1.55e-77 270
Msa0474720 AT1G29400.3 56.489 262 96 6 654 906 514 766 1.39e-71 254
Msa0474720 AT2G42890.3 48.905 274 124 3 181 438 81 354 2.89e-66 239
Msa0474720 AT2G42890.3 55.769 156 68 1 761 915 635 790 5.85e-46 178
Msa0474720 AT2G42890.2 48.905 274 124 3 181 438 81 354 2.89e-66 239
Msa0474720 AT2G42890.2 55.769 156 68 1 761 915 635 790 5.85e-46 178
Msa0474720 AT2G42890.1 48.905 274 124 3 181 438 94 367 2.95e-66 239
Msa0474720 AT2G42890.1 55.769 156 68 1 761 915 648 803 5.50e-46 179
Msa0474720 AT3G26120.1 42.308 156 68 2 790 925 405 558 2.19e-31 131
Msa0474720 AT3G26120.1 28.571 182 108 1 268 427 105 286 1.19e-18 91.7
Msa0474720 AT1G67770.1 40.506 158 75 4 778 916 320 477 5.24e-27 117
Msa0474720 AT1G67770.1 25.281 178 115 1 268 427 79 256 2.91e-16 83.6
Msa0474720 AT5G07930.1 36.975 119 61 2 790 895 132 249 3.74e-17 83.6
Msa0474720 AT5G07930.2 39.048 105 51 1 790 881 132 236 4.56e-17 82.8
Msa0474720 AT5G07930.3 36.975 119 61 2 790 895 132 249 6.20e-17 83.2
Msa0474720 AT1G37140.1 39.048 105 58 2 792 890 83 187 1.33e-15 77.8

Find 273 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAGCTCATATGGTTTAAT+TGG 0.114750 3_3:-77624391 Msa0474720:CDS
TTAACTGAAGCTTAAAATTT+TGG 0.135436 3_3:-77619232 Msa0474720:three_prime_UTR
TAATCATCATGAATAGATTT+TGG 0.178888 3_3:+77625333 None:intergenic
CATTCATCAGGCTTGAATTC+TGG 0.185196 3_3:+77620120 None:intergenic
AAAATAGGACATTGAGTTCT+AGG 0.193390 3_3:-77623401 Msa0474720:CDS
CTGAGCATTGGCGTCTTTAT+AGG 0.199813 3_3:-77619085 Msa0474720:three_prime_UTR
GAAACGAGGGCTCACAATTT+TGG 0.213621 3_3:-77619393 Msa0474720:three_prime_UTR
ATTAAAATGGCTGCCAATAT+TGG 0.228444 3_3:-77622084 Msa0474720:CDS
ATTTCTCTTTCTATAATTTC+TGG 0.240924 3_3:-77625642 Msa0474720:five_prime_UTR
TTGGAAGGAGATGAACTTTC+AGG 0.248781 3_3:-77623793 Msa0474720:CDS
TTTCATTGCATCAACATTAC+TGG 0.261551 3_3:+77622197 None:intergenic
GAAACACATTCTTACACTTT+TGG 0.261999 3_3:+77624296 None:intergenic
TCAAGGGAATTCTTCAACTT+TGG 0.278731 3_3:-77619592 Msa0474720:CDS
TTTAAAGGCAAAAGTTCTTT+TGG 0.281264 3_3:-77623724 Msa0474720:CDS
GTGAATGATTCTGATATTAA+AGG 0.288835 3_3:+77626653 None:intergenic
TTTGTCAAACACCATTAAAA+TGG 0.296917 3_3:-77622097 Msa0474720:CDS
CAATGAAAGCACTTCAAAAT+AGG 0.318732 3_3:-77623416 Msa0474720:CDS
TGTGGATCCAGTTCCAATAT+TGG 0.320691 3_3:+77622071 None:intergenic
ATCTGATGGCAGGCATATTC+AGG 0.322437 3_3:-77622043 Msa0474720:CDS
AAATTGAGGCTGACACTATA+GGG 0.330989 3_3:-77623942 Msa0474720:CDS
GGTCGCTCTCTGGTTTGGTT+TGG 0.331373 3_3:+77626775 None:intergenic
TGTTTGTTCTTCCAGCAATA+TGG 0.333713 3_3:-77623522 Msa0474720:intron
TCTGGTGGAGGCTTGGAAAA+TGG 0.333832 3_3:-77622351 Msa0474720:CDS
TGCCAAACCACAGCATTTGA+TGG 0.337784 3_3:+77621433 None:intergenic
ATACTTACTTTGAAATCAAT+TGG 0.341793 3_3:+77620471 None:intergenic
GAGGTTGAAGAGAGAGAAAA+TGG 0.343819 3_3:+77626710 None:intergenic
TGCAGAGGAATGTTGGATTA+AGG 0.349422 3_3:-77625359 Msa0474720:intron
GACATTGAGTTCTAGGAAAC+TGG 0.351184 3_3:-77623394 Msa0474720:CDS
ATAATTTCTGGATAAGCTAT+AGG 0.351986 3_3:-77625630 Msa0474720:five_prime_UTR
AACGTTTATCTTCATTCATC+AGG 0.355362 3_3:+77620108 None:intergenic
TTGAATGGAATGTGCATTGC+TGG 0.364414 3_3:-77622858 Msa0474720:CDS
GATGGTGATCCTGCTTACTC+TGG 0.364672 3_3:-77623751 Msa0474720:CDS
GAAATTGAGGCTGACACTAT+AGG 0.368667 3_3:-77623943 Msa0474720:CDS
GAAGTTTCTCATTCGTTCAT+TGG 0.372044 3_3:+77621018 None:intergenic
GATGCTTGGAGGCAGTATAA+AGG 0.373437 3_3:+77623487 None:intergenic
TCTTGGTGCAGTGAGGTTCT+TGG 0.376145 3_3:-77624040 Msa0474720:intron
GCTTCTCTCCGTTCATTGAA+TGG 0.377977 3_3:-77622873 Msa0474720:CDS
GCATCTGCTGTAAAAGTATC+TGG 0.382259 3_3:-77622225 Msa0474720:CDS
ATTCAGGGAATGATCTCAAC+TGG 0.382922 3_3:-77622027 Msa0474720:CDS
CTCTGGTTCATTATTTCAAA+AGG 0.388319 3_3:+77625604 None:intergenic
TCCCCGACAACTCTCATCTA+TGG 0.390546 3_3:+77620515 None:intergenic
CTTGGTGCAGTGAGGTTCTT+GGG 0.393851 3_3:-77624039 Msa0474720:intron
CCATCTGTATGGAATAGAAT+AGG 0.393946 3_3:+77620080 None:intergenic
GGAGAGTCTCCTGATGCTCC+TGG 0.395092 3_3:-77621244 Msa0474720:CDS
ATGGTGTTTGACAAATTGTA+AGG 0.398111 3_3:+77622105 None:intergenic
TCGCCGGTCGCTCTCTGGTT+TGG 0.399046 3_3:+77626770 None:intergenic
ACAAAAGATCTCATGATGTT+TGG 0.402289 3_3:+77626560 None:intergenic
AAAGAATGAGGGTGCAATCT+TGG 0.404397 3_3:+77622162 None:intergenic
CTTGCATATGCCCGAATTCA+AGG 0.407186 3_3:-77620167 Msa0474720:CDS
ATGGCTGCCAATATTGGAAC+TGG 0.408530 3_3:-77622078 Msa0474720:CDS
GTTAATGGCGTTGGTTCTCC+TGG 0.409145 3_3:-77621394 Msa0474720:CDS
TATGCTCGCCGGTCGCTCTC+TGG 0.409598 3_3:+77626765 None:intergenic
TCCGGTGTCACTGATGGTTT+AGG 0.412288 3_3:-77623889 Msa0474720:CDS
CTAGCTCATATGGTTTAATT+GGG 0.413117 3_3:-77624390 Msa0474720:CDS
CATGGTACACTGATGATATC+TGG 0.414020 3_3:-77623121 Msa0474720:CDS
CAGCCAGCATCTAGCTCATA+TGG 0.414663 3_3:-77624400 Msa0474720:CDS
TGAAGGTCGAGGTACATAAC+TGG 0.418769 3_3:-77619344 Msa0474720:three_prime_UTR
TTTACCGGATCACCAGCATT+TGG 0.420008 3_3:+77620056 None:intergenic
CGGTTGTCACATGTCTTCCC+TGG 0.420921 3_3:-77621079 Msa0474720:CDS
GTCATCCTAGGATTGCAATA+TGG 0.422477 3_3:-77622812 Msa0474720:intron
AACAAGATTGTCACCAATGC+AGG 0.425656 3_3:-77624367 Msa0474720:CDS
GGAAAGACAACATTCTTACT+TGG 0.427204 3_3:-77621266 Msa0474720:CDS
AATCCTACAGAGAAGGATAT+TGG 0.433618 3_3:-77623145 Msa0474720:CDS
AATCTAAAACCAGGAGCATC+AGG 0.433903 3_3:+77621235 None:intergenic
AGGAAACATCATCATAAAGA+TGG 0.434351 3_3:+77625560 None:intergenic
CTATAAAGACGCCAATGCTC+AGG 0.435935 3_3:+77619086 None:intergenic
ATGTCACAGACTAGTTTATC+CGG 0.437906 3_3:-77624535 Msa0474720:CDS
TGGATCAGCACCAGTTGTTA+CGG 0.438451 3_3:-77621299 Msa0474720:CDS
GGATCAGCACCAGTTGTTAC+GGG 0.445097 3_3:-77621298 Msa0474720:CDS
CATAACAAACCCACGATGCT+TGG 0.445998 3_3:+77623473 None:intergenic
CTCCATCAAATGCTGTGGTT+TGG 0.447636 3_3:-77621435 Msa0474720:CDS
TATCGTGATGGTTTAGCTAA+TGG 0.450083 3_3:-77622132 Msa0474720:CDS
TGCAAATATTAGAGTAAGGC+CGG 0.450326 3_3:-77619652 Msa0474720:CDS
CAGCATATGAGCCGGTGTCC+TGG 0.451181 3_3:+77621348 None:intergenic
GCTTTCACGTGCGCCTGCAT+TGG 0.451678 3_3:+77624354 None:intergenic
GGAGTTATTGCATCTGGTGG+AGG 0.451718 3_3:-77622363 Msa0474720:CDS
TATGACTCAGCCATCTCAAA+AGG 0.452052 3_3:-77622537 Msa0474720:CDS
TATTGCATCTGGTGGAGGCT+TGG 0.455373 3_3:-77622358 Msa0474720:CDS
CCCCACGCGATATGCGGCCT+AGG 0.456030 3_3:+77620936 None:intergenic
CAGGGTGATCCCGTAACAAC+TGG 0.456473 3_3:+77621289 None:intergenic
TGAATTATCACCCGAGATCA+TGG 0.457507 3_3:-77624438 Msa0474720:CDS
ATGGTGATCCTGCTTACTCT+GGG 0.457648 3_3:-77623750 Msa0474720:CDS
CAGCATTTGGACCATCTGTA+TGG 0.458360 3_3:+77620069 None:intergenic
GGAGAAGTTTAACAGTGAAA+AGG 0.460631 3_3:-77620198 Msa0474720:CDS
ATCATCAGCTTTATCATATG+TGG 0.460895 3_3:-77621483 Msa0474720:CDS
TCGTCTGGAGTTATTGCATC+TGG 0.461258 3_3:-77622369 Msa0474720:CDS
GATTTGTATGGTTCTTCCTC+AGG 0.464347 3_3:+77623973 None:intergenic
GAAGTCATGGGAAGTCTCCC+AGG 0.464747 3_3:+77621061 None:intergenic
ACGATTTGACATCCAGTGTT+GGG 0.466653 3_3:-77621117 Msa0474720:CDS
ATTTCTTCAAGAGATTTGTA+TGG 0.466918 3_3:+77623961 None:intergenic
CATCTGTATGGAATAGAATA+GGG 0.468346 3_3:+77620081 None:intergenic
AAAAGGAGGTGTGTGTTAGT+TGG 0.468735 3_3:+77626891 None:intergenic
ATGCTTGGAGGCAGTATAAA+GGG 0.471188 3_3:+77623488 None:intergenic
TGATTTCTTACTATGACCTA+AGG 0.471450 3_3:-77623452 Msa0474720:CDS
TTGGGTTCTCTAGGAAATGC+AGG 0.471896 3_3:-77621214 Msa0474720:CDS
GGACAAGATGAACCTGATCT+TGG 0.472838 3_3:-77622515 Msa0474720:CDS
ACATATGATAAAGCTGATGA+TGG 0.473859 3_3:+77621485 None:intergenic
CTATATGTTGGGATTGTTGA+AGG 0.476578 3_3:-77619054 Msa0474720:three_prime_UTR
CATTGAACTGTTAGTGCTTG+AGG 0.478549 3_3:+77619498 None:intergenic
GAGAGAAGAGTTGGAGCAGC+CGG 0.478751 3_3:-77619419 Msa0474720:three_prime_UTR
AAATTTCGACATTGAAGTCA+TGG 0.479844 3_3:+77621048 None:intergenic
CAAATCTCTTGAAGAAATTG+AGG 0.479991 3_3:-77623956 Msa0474720:CDS
GATAAACTAGTCTGTGACAT+TGG 0.480263 3_3:+77624538 None:intergenic
TTTCATGTGCAGAGGAATGT+TGG 0.480325 3_3:-77625366 Msa0474720:intron
AGCATATGAGCCGGTGTCCT+GGG 0.483499 3_3:+77621349 None:intergenic
AGTGAAATGGCAGCTTCACC+TGG 0.484170 3_3:-77624613 Msa0474720:CDS
AAGGCAGCTGTGATGCAGAT+AGG 0.484556 3_3:+77622313 None:intergenic
TGGTCCAAATGCTGGTGATC+CGG 0.486226 3_3:-77620060 Msa0474720:intron
GATTTGTTCAGCAGTGGTGG+AGG 0.487187 3_3:-77623823 Msa0474720:CDS
ATATTTGCACCCAAGGGAAA+AGG 0.487350 3_3:+77619666 None:intergenic
TATTTGATATGATTCATCTC+TGG 0.487550 3_3:+77622927 None:intergenic
AAACCAAACCAGAGAGCGAC+CGG 0.490438 3_3:-77626773 Msa0474720:five_prime_UTR
AGCCATAGATGAGAGTTGTC+GGG 0.490777 3_3:-77620517 Msa0474720:CDS
TGGAGGCAGTATAAAGGGTT+CGG 0.491188 3_3:+77623493 None:intergenic
AGCCACCATATTGCAATCCT+AGG 0.491608 3_3:+77622807 None:intergenic
GTAAGAATGTTGTCTTTCCC+AGG 0.492218 3_3:+77621270 None:intergenic
CTAGGCATCTGAGGAAGACC+AGG 0.494575 3_3:+77621376 None:intergenic
TAGTGCATTGTGTGTTTCAA+GGG 0.494866 3_3:-77619173 Msa0474720:three_prime_UTR
GATAGCGAGAAATACTTGTT+GGG 0.496306 3_3:+77620878 None:intergenic
TGTGTGAGAGAGAGAAGAGT+TGG 0.498399 3_3:-77619428 Msa0474720:three_prime_UTR
TGAGCTAAAGGCTCTCTTTG+AGG 0.498928 3_3:-77623644 Msa0474720:intron
GCAGTGAGGTTCTTGGGAAA+TGG 0.500531 3_3:-77624033 Msa0474720:intron
TGCAGAAGACTCTGAGCTAA+AGG 0.500582 3_3:-77623656 Msa0474720:CDS
TGCACATCAGACCATGATCT+CGG 0.501021 3_3:+77624427 None:intergenic
CTCAGATGCCTAGCTTTCCC+AGG 0.501075 3_3:-77621366 Msa0474720:CDS
AATAATTACCTCAGAAGCAT+AGG 0.505187 3_3:+77625540 None:intergenic
AGATGCCCCTCTTGCGGTGT+TGG 0.505306 3_3:+77622242 None:intergenic
TTGAGATTATGACCAAGATC+AGG 0.507730 3_3:+77622503 None:intergenic
CATACAGATGGTCCAAATGC+TGG 0.508760 3_3:-77620068 Msa0474720:CDS
CAGCCATAGATGAGAGTTGT+CGG 0.511525 3_3:-77620518 Msa0474720:CDS
TTTGATTTGTTCAGCAGTGG+TGG 0.512433 3_3:-77623826 Msa0474720:CDS
AAACTTGTAAGATGGTAGAA+TGG 0.514669 3_3:+77619267 None:intergenic
TACTCTAATATTTGCACCCA+AGG 0.516015 3_3:+77619659 None:intergenic
CATATGATAAAGCTGATGAT+GGG 0.516748 3_3:+77621486 None:intergenic
TCTATGGTGAAACATTGATA+AGG 0.517049 3_3:-77626474 Msa0474720:five_prime_UTR
TTGCAGAACAAGTGTAATGT+TGG 0.517297 3_3:-77620374 Msa0474720:intron
TGAATTCCTTATGCTGTAGA+CGG 0.518987 3_3:-77626534 Msa0474720:five_prime_UTR
CCACAGAAGCATCTGATGGC+AGG 0.521735 3_3:-77622053 Msa0474720:CDS
CCAACGCCATTAACAAAAGA+TGG 0.523153 3_3:+77621403 None:intergenic
CGATACTCAGGCAAAGAATG+AGG 0.523522 3_3:+77622150 None:intergenic
TTCATCAACATGATTGATCC+TGG 0.523625 3_3:-77620344 Msa0474720:CDS
ATAGTGCATTGTGTGTTTCA+AGG 0.523792 3_3:-77619174 Msa0474720:three_prime_UTR
CATCTTATTCTTAAGACAGA+AGG 0.524749 3_3:-77622477 Msa0474720:CDS
GTCTCTCTAAACTTGTAAGA+TGG 0.527628 3_3:+77619259 None:intergenic
GAAGAGTAGAGGCGAATCTC+CGG 0.527693 3_3:+77626733 None:intergenic
TGTGAGCCCTCGTTTCCTAC+CGG 0.528611 3_3:+77619400 None:intergenic
AGGTTGAAGAGAGAGAAAAT+GGG 0.529333 3_3:+77626711 None:intergenic
AAGACATGTGACAACCGCTT+AGG 0.529481 3_3:+77621085 None:intergenic
AATAACTCCAGACGATAGTC+CGG 0.529618 3_3:+77622377 None:intergenic
TTTACAGCCGGACTATCGTC+TGG 0.530189 3_3:-77622384 Msa0474720:intron
TCTCAAGTAACCTGGTGGAA+TGG 0.531415 3_3:+77620311 None:intergenic
GAAAACAGATCATCTTCGTC+GGG 0.531898 3_3:+77623910 None:intergenic
AGCTTGAACCTGGTCATCCT+AGG 0.535589 3_3:-77622824 Msa0474720:CDS
AAGCAGATCAAGCTTGAACC+TGG 0.538364 3_3:-77622834 Msa0474720:CDS
GTTCAGCAGTGGTGGAGGCA+TGG 0.539659 3_3:-77623818 Msa0474720:CDS
AAACCATATGAGCTAGATGC+TGG 0.540798 3_3:+77624397 None:intergenic
TACAGCAGATGCCCCTCTTG+CGG 0.541207 3_3:+77622236 None:intergenic
TTGACATCCAGTGTTGGGCA+TGG 0.541362 3_3:-77621112 Msa0474720:CDS
AACGATTTGACATCCAGTGT+TGG 0.541528 3_3:-77621118 Msa0474720:CDS
AAAAGAATCAGTGGCTTGGA+TGG 0.542438 3_3:-77623769 Msa0474720:CDS
CAGCTTTATCATATGTGGAA+TGG 0.542662 3_3:-77621478 Msa0474720:CDS
CCTGCCATCAGATGCTTCTG+TGG 0.542912 3_3:+77622053 None:intergenic
AGGAGAGCCATGCCCAACAC+TGG 0.543846 3_3:+77621105 None:intergenic
CAGTGGTGGAGGCATGGAGT+TGG 0.544371 3_3:-77623812 Msa0474720:CDS
GGAAACATCATCATAAAGAT+GGG 0.545230 3_3:+77625561 None:intergenic
TTCAACAAAGCTAGCAAGTG+AGG 0.546113 3_3:-77625680 Msa0474720:five_prime_UTR
AGAGAAAATGGGAAGAGTAG+AGG 0.547636 3_3:+77626722 None:intergenic
GGCGAGGTTGTTATGCTCGC+CGG 0.548863 3_3:+77626754 None:intergenic
TGGGTGCAAATATTAGAGTA+AGG 0.549885 3_3:-77619656 Msa0474720:CDS
ATGACTCAGCCATCTCAAAA+GGG 0.550864 3_3:-77622536 Msa0474720:CDS
AACAAACCCACGATGCTTGG+AGG 0.551442 3_3:+77623476 None:intergenic
TAGCTGGCAGTTGCATCCTC+CGG 0.553694 3_3:-77621182 Msa0474720:CDS
TGTCACAGACTAGTTTATCC+GGG 0.553964 3_3:-77624534 Msa0474720:CDS
ACCTAGGCCGCATATCGCGT+GGG 0.553997 3_3:-77620937 Msa0474720:CDS
TCTGATCAGAATATTACTGC+TGG 0.554637 3_3:-77624003 Msa0474720:CDS
AACATGTTGCTTGAAAGATC+CGG 0.556555 3_3:+77621163 None:intergenic
TTCAACTTTGGCAAATGCAG+AGG 0.557116 3_3:-77619580 Msa0474720:CDS
TTGTTTGTATCCCTGAGCAT+TGG 0.557385 3_3:-77619097 Msa0474720:three_prime_UTR
TCTGATGGCAGGCATATTCA+GGG 0.557958 3_3:-77622042 Msa0474720:CDS
CTGGGAAAGCTAGGCATCTG+AGG 0.559188 3_3:+77621367 None:intergenic
TTGAAGAATTCCCTTGACTA+CGG 0.559870 3_3:+77619598 None:intergenic
TTAAAAGCCCCAGAGTAAGC+AGG 0.560466 3_3:+77623742 None:intergenic
AACGAGGAGAGCCGTAGTCA+AGG 0.561117 3_3:-77619609 Msa0474720:CDS
GAAAGACAACATTCTTACTT+GGG 0.563473 3_3:-77621265 Msa0474720:CDS
AAGCAGTAGTAACACCCCTC+TGG 0.563767 3_3:+77625587 None:intergenic
GCACATCAGACCATGATCTC+GGG 0.565376 3_3:+77624428 None:intergenic
AATTTCGACATTGAAGTCAT+GGG 0.565453 3_3:+77621049 None:intergenic
AGTATTTCCAACACCGCAAG+AGG 0.565609 3_3:-77622249 Msa0474720:CDS
GACCTAGGCCGCATATCGCG+TGG 0.567782 3_3:-77620938 Msa0474720:CDS
ACGAGGAGAGCCGTAGTCAA+GGG 0.569069 3_3:-77619608 Msa0474720:CDS
TCTTTGCCTGAGTATCGTGA+TGG 0.573141 3_3:-77622144 Msa0474720:CDS
GCCGGTGTCCTGGGAAAGCT+AGG 0.574300 3_3:+77621358 None:intergenic
ATCTGATATTGCAATGTGGA+AGG 0.579100 3_3:-77626601 Msa0474720:five_prime_UTR
TACTGCTGGTTCTCTTCCTG+AGG 0.579244 3_3:-77623989 Msa0474720:CDS
TCTGGAGTTATTGCATCTGG+TGG 0.580561 3_3:-77622366 Msa0474720:CDS
ATACTGCCTCCAAGCATCGT+GGG 0.580674 3_3:-77623482 Msa0474720:CDS
ACAGATCATCTTCGTCGGGA+AGG 0.581398 3_3:+77623914 None:intergenic
ATCTTATTCTTAAGACAGAA+GGG 0.583393 3_3:-77622476 Msa0474720:intron
AGTTGTTACGGGATCACCCT+GGG 0.584532 3_3:-77621287 Msa0474720:CDS
TGTCTTCCCCACGCGATATG+CGG 0.585805 3_3:+77620930 None:intergenic
TGGCATGGTAGATGCGCTGA+AGG 0.585812 3_3:-77624476 Msa0474720:CDS
TATAAAGACGCCAATGCTCA+GGG 0.586782 3_3:+77619087 None:intergenic
TATACGTTATTCAATTCCAA+AGG 0.587943 3_3:-77623370 Msa0474720:intron
TGGAATGGAATTATTTGACC+AGG 0.588103 3_3:+77620326 None:intergenic
TCACATATTGACCACCATGT+TGG 0.588386 3_3:-77621319 Msa0474720:CDS
GATTTCTTACTATGACCTAA+GGG 0.592591 3_3:-77623451 Msa0474720:CDS
CCGGGAAAATTACGTAGTAG+TGG 0.594703 3_3:-77619633 Msa0474720:CDS
TGCACATTCCATTCAATGAA+CGG 0.594988 3_3:+77622865 None:intergenic
GCTAAACCATCACGATACTC+AGG 0.595277 3_3:+77622138 None:intergenic
GGTTGTCACATGTCTTCCCT+GGG 0.595285 3_3:-77621078 Msa0474720:CDS
TGGCCAATATCCTTCTCTGT+AGG 0.595679 3_3:+77623142 None:intergenic
CCTATTCTATTCCATACAGA+TGG 0.596105 3_3:-77620080 Msa0474720:CDS
TATACTGCCTCCAAGCATCG+TGG 0.596726 3_3:-77623483 Msa0474720:CDS
ATTGCAATGTGGAAGGAACA+AGG 0.596793 3_3:-77626594 Msa0474720:five_prime_UTR
TCAAATAATTCCATTCCACC+AGG 0.598283 3_3:-77620321 Msa0474720:intron
GCAAATATTAGAGTAAGGCC+GGG 0.599001 3_3:-77619651 Msa0474720:CDS
TATGTTGGGATTGTTGAAGG+AGG 0.599181 3_3:-77619051 Msa0474720:three_prime_UTR
GGAGCAGCCGGTAGGAAACG+AGG 0.600020 3_3:-77619407 Msa0474720:three_prime_UTR
AGATGCGCTGAAGGATTCAA+AGG 0.602052 3_3:-77624467 Msa0474720:CDS
ACACACAATGCACTATCTCA+AGG 0.602220 3_3:+77619181 None:intergenic
TCCTAAACCATCAGTGACAC+CGG 0.604371 3_3:+77623888 None:intergenic
TAAGAATGTTGTCTTTCCCA+GGG 0.605754 3_3:+77621271 None:intergenic
GGAAAACAGATCATCTTCGT+CGG 0.606267 3_3:+77623909 None:intergenic
GATCATGGTCTGATGTGCAT+AGG 0.608179 3_3:-77624423 Msa0474720:CDS
GGCGAGCATAACAACCTCGC+CGG 0.608997 3_3:-77626752 Msa0474720:five_prime_UTR
AAACAATTTGAACTCGACCT+AGG 0.609109 3_3:-77620953 Msa0474720:CDS
TGATGTTTCCTATGCTTCTG+AGG 0.609927 3_3:-77625548 Msa0474720:intron
ACTCTAATATTTGCACCCAA+GGG 0.610162 3_3:+77619660 None:intergenic
ATACAATGACGGAGTTGACA+TGG 0.611021 3_3:+77619468 None:intergenic
ATTGCAATCCTAGGATGACC+AGG 0.613668 3_3:+77622816 None:intergenic
TCAGTGTCTCTTGAAGAACT+TGG 0.613951 3_3:+77619531 None:intergenic
GATACTCAGGCAAAGAATGA+GGG 0.614189 3_3:+77622151 None:intergenic
TTAGGGAAATCCTACAGAGA+AGG 0.614924 3_3:-77623152 Msa0474720:intron
CAGTTGTTACGGGATCACCC+TGG 0.615223 3_3:-77621288 Msa0474720:CDS
CACACAATGCACTATCTCAA+GGG 0.615418 3_3:+77619182 None:intergenic
GAAGAGTTGGAGCAGCCGGT+AGG 0.617689 3_3:-77619415 Msa0474720:three_prime_UTR
TAAAATGTAATATACAATGA+CGG 0.618910 3_3:+77619457 None:intergenic
TCAGACAAAGAGAAGAAGAG+AGG 0.622728 3_3:+77626806 None:intergenic
ACAGAGAAGGATATTGGCCA+TGG 0.628087 3_3:-77623139 Msa0474720:CDS
GGTGGAGGCATGGAGTTGGA+AGG 0.628119 3_3:-77623808 Msa0474720:CDS
GATAAAGCTGATGATGGGGA+AGG 0.628408 3_3:+77621491 None:intergenic
TATTTCCAACACCGCAAGAG+GGG 0.630709 3_3:-77622247 Msa0474720:CDS
AATTGAGGCTGACACTATAG+GGG 0.630862 3_3:-77623941 Msa0474720:CDS
CCTAGGCCGCATATCGCGTG+GGG 0.630872 3_3:-77620936 Msa0474720:CDS
GAAGTGTGCAAAATGCCTCC+AGG 0.633750 3_3:+77624595 None:intergenic
GCCTAGCTTTCCCAGGACAC+CGG 0.635023 3_3:-77621359 Msa0474720:CDS
GTATTTCCAACACCGCAAGA+GGG 0.639319 3_3:-77622248 Msa0474720:CDS
GGATCCACAGAAGCATCTGA+TGG 0.639641 3_3:-77622057 Msa0474720:CDS
GCCATAGATGAGAGTTGTCG+GGG 0.642771 3_3:-77620516 Msa0474720:CDS
ATATGATAAAGCTGATGATG+GGG 0.645684 3_3:+77621487 None:intergenic
AATGCAGAGGAGTTTGCAAG+TGG 0.646273 3_3:-77619567 Msa0474720:CDS
CAACTGGTGCTGATCCAACA+TGG 0.647951 3_3:+77621305 None:intergenic
GCAATCTCCATCAAATGCTG+TGG 0.648016 3_3:-77621440 Msa0474720:CDS
TTCAGGGAATGATCTCAACT+GGG 0.655695 3_3:-77622026 Msa0474720:CDS
GAGCAGCCGGTAGGAAACGA+GGG 0.658135 3_3:-77619406 Msa0474720:three_prime_UTR
ATTCATGATGATTATCCACA+AGG 0.660419 3_3:-77625324 Msa0474720:intron
AGAGAACCCAATCTAAAACC+AGG 0.663738 3_3:+77621226 None:intergenic
TTGGGCATGGCTCTCCTAAG+CGG 0.664128 3_3:-77621099 Msa0474720:CDS
AAGTCATGGGAAGTCTCCCA+GGG 0.664771 3_3:+77621062 None:intergenic
TTATCGAAGAAAGCATTCGA+AGG 0.672277 3_3:+77622294 None:intergenic
GTCACAGACTAGTTTATCCG+GGG 0.680067 3_3:-77624533 Msa0474720:CDS
AAAATCATCTGAATTGTGTG+AGG 0.682133 3_3:+77626691 None:intergenic
GAAATGGCAGCTTCACCTGG+AGG 0.683059 3_3:-77624610 Msa0474720:CDS
CAGATATCATCAGTGTACCA+TGG 0.683392 3_3:+77623122 None:intergenic
ATGTTGCTTGAAAGATCCGG+AGG 0.688619 3_3:+77621166 None:intergenic
GATGCTCTCAGCATATGAGC+CGG 0.694610 3_3:+77621340 None:intergenic
TGGTGATCCTGCTTACTCTG+GGG 0.696259 3_3:-77623749 Msa0474720:CDS
CTGTATGGAATAGAATAGGG+CGG 0.700349 3_3:+77620084 None:intergenic
ATATATCTGATATTGCAATG+TGG 0.733494 3_3:-77626605 Msa0474720:five_prime_UTR
ATTACGTAGTAGTGGCAACG+AGG 0.734571 3_3:-77619625 Msa0474720:CDS
GTAGAGGCGAATCTCCGGCG+AGG 0.740182 3_3:+77626738 None:intergenic
TTTGAAATAATGAACCAGAG+GGG 0.758778 3_3:-77625601 Msa0474720:CDS
CTGGTGCTGATCCAACATGG+TGG 0.828834 3_3:+77621308 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTATAAATATTGTTTT+TGG - chr3_3:77619862-77619881 Msa0474720:intron 10.0%
!!! TAATATAAATGTTACTTTTT+GGG - chr3_3:77620110-77620129 Msa0474720:CDS 10.0%
!! GAAAAGAATATAAAAAGAAA+AGG + chr3_3:77619058-77619077 None:intergenic 15.0%
!!! AATATTCATGTTTTTTGTTT+TGG - chr3_3:77619550-77619569 Msa0474720:CDS 15.0%
!!! ATACATATTTTTTCCATAAA+GGG + chr3_3:77619663-77619682 None:intergenic 15.0%
!!! AATACATATTTTTTCCATAA+AGG + chr3_3:77619664-77619683 None:intergenic 15.0%
!!! CTAATATAAATGTTACTTTT+TGG - chr3_3:77620109-77620128 Msa0474720:CDS 15.0%
!! AACAGAAAACAATAAATAAA+AGG + chr3_3:77620173-77620192 None:intergenic 15.0%
!! TGTAAAAAAATAAAGACAAA+AGG + chr3_3:77622315-77622334 None:intergenic 15.0%
!!! ATAAATGATAATAATGGAAA+AGG + chr3_3:77622623-77622642 None:intergenic 15.0%
!! TTCCATTATTATCATTTATT+TGG - chr3_3:77622624-77622643 Msa0474720:intron 15.0%
!! AACCAAATAAATGATAATAA+TGG + chr3_3:77622629-77622648 None:intergenic 15.0%
!! AAAGATGAATTTATTTCAAA+AGG - chr3_3:77624038-77624057 Msa0474720:intron 15.0%
!!! ACTTATTGTTTTACTTTAAA+TGG - chr3_3:77624065-77624084 Msa0474720:intron 15.0%
!!! ATTTTGAAATTTTTAACATC+AGG - chr3_3:77624406-77624425 Msa0474720:CDS 15.0%
!!! TGTTTTACAAATTGTTTATT+TGG - chr3_3:77625121-77625140 Msa0474720:intron 15.0%
!! TATTAATACATATGTCAAAT+AGG + chr3_3:77625359-77625378 None:intergenic 15.0%
!!! ATTTGTTAACATTTATAGTT+AGG - chr3_3:77625996-77626015 Msa0474720:intron 15.0%
!! ACATTAAGTACTTAAAAAAT+AGG + chr3_3:77626113-77626132 None:intergenic 15.0%
!! TTTAAGTACTTAATGTAATA+AGG - chr3_3:77626117-77626136 Msa0474720:intron 15.0%
!! TAAAATGTAATATACAATGA+CGG + chr3_3:77626475-77626494 None:intergenic 15.0%
!!! TATTTACCTAAATTTTTGTA+TGG - chr3_3:77626637-77626656 Msa0474720:five_prime_UTR 15.0%
!! AAGAATATAAAAAGAAAAGG+AGG + chr3_3:77619055-77619074 None:intergenic 20.0%
!! CTCACAAAAAAAGATAAAAA+TGG + chr3_3:77619301-77619320 None:intergenic 20.0%
!!! ATTTTGCAAATTTACAAAGA+TGG - chr3_3:77619828-77619847 Msa0474720:intron 20.0%
!! ATTTCTCTTTCTATAATTTC+TGG - chr3_3:77620287-77620306 Msa0474720:intron 20.0%
!! GACATGTTTAGAAAAAAAAA+AGG + chr3_3:77620536-77620555 None:intergenic 20.0%
!!! TTTTTTTTCTAAACATGTCT+TGG - chr3_3:77620537-77620556 Msa0474720:CDS 20.0%
!!! TAATCATCATGAATAGATTT+TGG + chr3_3:77620599-77620618 None:intergenic 20.0%
!!! GCATTTAGAATAAATAACTA+TGG - chr3_3:77620946-77620965 Msa0474720:CDS 20.0%
!! TTAGAATAAATAACTATGGA+TGG - chr3_3:77620950-77620969 Msa0474720:CDS 20.0%
!!! ATCGTTTATTTCATTTTGTA+GGG - chr3_3:77620984-77621003 Msa0474720:CDS 20.0%
!!! GGTATTAATAGATTTCTTTT+TGG - chr3_3:77621010-77621029 Msa0474720:CDS 20.0%
!!! GTTTTTAATCATGATGATAT+TGG - chr3_3:77621155-77621174 Msa0474720:CDS 20.0%
!! TTAAATGAACTGCTTATTTA+TGG + chr3_3:77621238-77621257 None:intergenic 20.0%
!! TAAATAAGCAGTTCATTTAA+TGG - chr3_3:77621238-77621257 Msa0474720:CDS 20.0%
!!! TTGTCTTTATTTTTTTACAG+CGG - chr3_3:77622316-77622335 Msa0474720:CDS 20.0%
!! ATCATTTATTTGGTTAAAGA+CGG - chr3_3:77622634-77622653 Msa0474720:intron 20.0%
!!! AAACGTATTTTTGGATTTTA+TGG - chr3_3:77622862-77622881 Msa0474720:CDS 20.0%
!! ACAAAACATATATCAAAGAT+AGG + chr3_3:77623233-77623252 None:intergenic 20.0%
!! AAAAGCAAGAATACTATATA+AGG + chr3_3:77623298-77623317 None:intergenic 20.0%
!! TATACTACTTATAGATAGAA+AGG + chr3_3:77624301-77624320 None:intergenic 20.0%
!!! AAATTTTTAACATCAGGAAA+TGG - chr3_3:77624412-77624431 Msa0474720:CDS 20.0%
!!! AATTTTTAACATCAGGAAAT+GGG - chr3_3:77624413-77624432 Msa0474720:CDS 20.0%
!! TGACATATGTATTAATATCT+CGG - chr3_3:77625362-77625381 Msa0474720:intron 20.0%
!!! ATACTTACTTTGAAATCAAT+TGG + chr3_3:77625461-77625480 None:intergenic 20.0%
!! TTTCAAAGTAAGTATTTGTT+TGG - chr3_3:77625466-77625485 Msa0474720:intron 20.0%
!!! TTAACTGAAGCTTAAAATTT+TGG - chr3_3:77626697-77626716 Msa0474720:five_prime_UTR 20.0%
!!! AAGAGAGGTTTTTTTTGTTT+TGG + chr3_3:77619111-77619130 None:intergenic 25.0%
! GTGAATGATTCTGATATTAA+AGG + chr3_3:77619279-77619298 None:intergenic 25.0%
! ATATATCTGATATTGCAATG+TGG - chr3_3:77619324-77619343 Msa0474720:three_prime_UTR 25.0%
!!! TTGTTTTTTGCTCAATTCTA+TGG - chr3_3:77619439-77619458 Msa0474720:three_prime_UTR 25.0%
!! ACATTGATAAGGAAGATTTT+TGG - chr3_3:77619466-77619485 Msa0474720:three_prime_UTR 25.0%
!!! TTTGGTTTTTATGTCCATTT+GGG - chr3_3:77619576-77619595 Msa0474720:CDS 25.0%
!!! TCTTGATCTGTTTGTTTTTA+AGG - chr3_3:77619690-77619709 Msa0474720:intron 25.0%
!!! ATTGTTTTTGGCAATCAATT+AGG - chr3_3:77619874-77619893 Msa0474720:intron 25.0%
! AAAGAGATTAGTGCAAAATT+AGG + chr3_3:77619973-77619992 None:intergenic 25.0%
! CAATAAATAAAAGGTGACAT+TGG + chr3_3:77620164-77620183 None:intergenic 25.0%
! ATCATCTGTTGAAAAATTCA+AGG + chr3_3:77620218-77620237 None:intergenic 25.0%
!! ATAATTTCTGGATAAGCTAT+AGG - chr3_3:77620299-77620318 Msa0474720:intron 25.0%
!!! TTTTGAAATAATGAACCAGA+GGG - chr3_3:77620327-77620346 Msa0474720:CDS 25.0%
! AAAACCAAAATGAGACAATT+CGG + chr3_3:77620417-77620436 None:intergenic 25.0%
! TAAAAAAACACTCAAAGTCT+TGG + chr3_3:77620458-77620477 None:intergenic 25.0%
! AAAAAAAGGCAATAACATTG+AGG + chr3_3:77620522-77620541 None:intergenic 25.0%
! CTTTGGTTAGTAGATATATA+TGG + chr3_3:77620706-77620725 None:intergenic 25.0%
!! CATCGTTTATTTCATTTTGT+AGG - chr3_3:77620983-77621002 Msa0474720:CDS 25.0%
!! AGTTCTATGTTCAAATTTTC+AGG - chr3_3:77621289-77621308 Msa0474720:CDS 25.0%
!! GTTCTATGTTCAAATTTTCA+GGG - chr3_3:77621290-77621309 Msa0474720:CDS 25.0%
!!! TATTTTTGCATTTCTTTCGA+GGG + chr3_3:77621365-77621384 None:intergenic 25.0%
!!! GTTTTAGAAAACGTACATTT+TGG - chr3_3:77621421-77621440 Msa0474720:CDS 25.0%
! TGCATCGTAACAAAATTAAA+TGG + chr3_3:77621706-77621725 None:intergenic 25.0%
!!! ATGTTTTTTGTTGAGTTCAA+TGG - chr3_3:77621826-77621845 Msa0474720:intron 25.0%
! ATTTCTTCAAGAGATTTGTA+TGG + chr3_3:77621971-77621990 None:intergenic 25.0%
!! TTTAAAGGCAAAAGTTCTTT+TGG - chr3_3:77622205-77622224 Msa0474720:CDS 25.0%
! TATACGTTATTCAATTCCAA+AGG - chr3_3:77622559-77622578 Msa0474720:intron 25.0%
!!! TATTCCTATTTTTCATGTTC+TGG - chr3_3:77622725-77622744 Msa0474720:intron 25.0%
! ATAACCAGAACATGAAAAAT+AGG + chr3_3:77622732-77622751 None:intergenic 25.0%
!! ATTTTATGGAGAAATCAAAG+AGG - chr3_3:77622876-77622895 Msa0474720:CDS 25.0%
! TATTTGATATGATTCATCTC+TGG + chr3_3:77623005-77623024 None:intergenic 25.0%
!! ATTGAATTTTATGATGTTCG+AGG - chr3_3:77623026-77623045 Msa0474720:intron 25.0%
!!! ATAGTATTCTTGCTTTTTAG+TGG - chr3_3:77623301-77623320 Msa0474720:intron 25.0%
! ATCTTATTCTTAAGACAGAA+GGG - chr3_3:77623453-77623472 Msa0474720:CDS 25.0%
! TTTGTCAAACACCATTAAAA+TGG - chr3_3:77623832-77623851 Msa0474720:CDS 25.0%
! TATCTATAAGTAGTATAAGC+TGG - chr3_3:77624304-77624323 Msa0474720:intron 25.0%
! ATCTATAAGTAGTATAAGCT+GGG - chr3_3:77624305-77624324 Msa0474720:intron 25.0%
! AATAGAAGAAAAATATGCAC+AGG + chr3_3:77625243-77625262 None:intergenic 25.0%
! GATAAAATGCTATGTTATTG+TGG - chr3_3:77626207-77626226 Msa0474720:intron 25.0%
! TGCACGAAAAAAAGAAAAAA+TGG + chr3_3:77626239-77626258 None:intergenic 25.0%
!!! ATTTTTTCTTTTTTTCGTGC+AGG - chr3_3:77626238-77626257 Msa0474720:intron 25.0%
! ATGGTTCCATACAAAAATTT+AGG + chr3_3:77626646-77626665 None:intergenic 25.0%
!! TAGGATTTTTGTCTATATGT+TGG - chr3_3:77626863-77626882 Msa0474720:five_prime_UTR 25.0%
!! AGGATTTTTGTCTATATGTT+GGG - chr3_3:77626864-77626883 Msa0474720:five_prime_UTR 25.0%
AAAATCATCTGAATTGTGTG+AGG + chr3_3:77619241-77619260 None:intergenic 30.0%
ACAAAAGATCTCATGATGTT+TGG + chr3_3:77619372-77619391 None:intergenic 30.0%
TCTATGGTGAAACATTGATA+AGG - chr3_3:77619455-77619474 Msa0474720:three_prime_UTR 30.0%
! TTTTGTTCGAATTGTTGACA+AGG - chr3_3:77619507-77619526 Msa0474720:three_prime_UTR 30.0%
!!! TGTTTTTTGTTTTGGCTGTT+TGG - chr3_3:77619558-77619577 Msa0474720:CDS 30.0%
!!! GTTTGGTTTTTATGTCCATT+TGG - chr3_3:77619575-77619594 Msa0474720:CDS 30.0%
ACAGATCAAAAACATGAACA+TGG + chr3_3:77619621-77619640 None:intergenic 30.0%
TGTTTAGATTAGACCCTTTA+TGG - chr3_3:77619647-77619666 Msa0474720:CDS 30.0%
TAGAAATAGAGCCTCTAAAT+AGG - chr3_3:77620011-77620030 Msa0474720:intron 30.0%
AGAAATAGAGCCTCTAAATA+GGG - chr3_3:77620012-77620031 Msa0474720:intron 30.0%
ACTAAAGAAACCCTATTTAG+AGG + chr3_3:77620025-77620044 None:intergenic 30.0%
!!! TCCTTTTTTGTTTGAGAGTA+TGG - chr3_3:77620063-77620082 Msa0474720:CDS 30.0%
ACCATACTCTCAAACAAAAA+AGG + chr3_3:77620067-77620086 None:intergenic 30.0%
!! TTTTGTTTGAGAGTATGGTA+TGG - chr3_3:77620068-77620087 Msa0474720:CDS 30.0%
! TTTGTTTGAGAGTATGGTAT+GGG - chr3_3:77620069-77620088 Msa0474720:CDS 30.0%
! CTCTGGTTCATTATTTCAAA+AGG + chr3_3:77620328-77620347 None:intergenic 30.0%
!!! CTTTTGAAATAATGAACCAG+AGG - chr3_3:77620326-77620345 Msa0474720:CDS 30.0%
! TTTGAAATAATGAACCAGAG+GGG - chr3_3:77620328-77620347 Msa0474720:CDS 30.0%
GGAAACATCATCATAAAGAT+GGG + chr3_3:77620371-77620390 None:intergenic 30.0%
AGGAAACATCATCATAAAGA+TGG + chr3_3:77620372-77620391 None:intergenic 30.0%
! AATAATTACCTCAGAAGCAT+AGG + chr3_3:77620392-77620411 None:intergenic 30.0%
! TTTTCCGAATTGTCTCATTT+TGG - chr3_3:77620410-77620429 Msa0474720:intron 30.0%
ATTCATGATGATTATCCACA+AGG - chr3_3:77620605-77620624 Msa0474720:intron 30.0%
AGGTAAGGTACACAAAAATA+TGG + chr3_3:77620836-77620855 None:intergenic 30.0%
!! ATTAAAACTAGAGAGGTATC+AGG + chr3_3:77620856-77620875 None:intergenic 30.0%
CTGTTCAATTAAAACTAGAG+AGG + chr3_3:77620863-77620882 None:intergenic 30.0%
CGACAGTAAAAGTTCAAAAA+TGG + chr3_3:77620898-77620917 None:intergenic 30.0%
TAAAACATCTATACCATCCT+GGG + chr3_3:77620924-77620943 None:intergenic 30.0%
ATAAAACATCTATACCATCC+TGG + chr3_3:77620925-77620944 None:intergenic 30.0%
! TTATTTCATTTTGTAGGGAG+TGG - chr3_3:77620989-77621008 Msa0474720:CDS 30.0%
! GATATAGCTTGCGTAATTAA+TGG - chr3_3:77621056-77621075 Msa0474720:CDS 30.0%
AAGTAAACACACACGAATAT+GGG + chr3_3:77621210-77621229 None:intergenic 30.0%
TGGACATGTAATTCATTTGT+TGG - chr3_3:77621258-77621277 Msa0474720:CDS 30.0%
!!! CTATTTTTGCATTTCTTTCG+AGG + chr3_3:77621366-77621385 None:intergenic 30.0%
CTCGAAAGAAATGCAAAAAT+AGG - chr3_3:77621364-77621383 Msa0474720:CDS 30.0%
! TCTAGCTCATATGGTTTAAT+TGG - chr3_3:77621538-77621557 Msa0474720:intron 30.0%
CTAGCTCATATGGTTTAATT+GGG - chr3_3:77621539-77621558 Msa0474720:intron 30.0%
!! ACACTTTTGGCTAAACATAT+CGG + chr3_3:77621623-77621642 None:intergenic 30.0%
! GAAACACATTCTTACACTTT+TGG + chr3_3:77621636-77621655 None:intergenic 30.0%
! AATAGAAAAGTTCCCTTTTC+TGG + chr3_3:77621805-77621824 None:intergenic 30.0%
CAAATCTCTTGAAGAAATTG+AGG - chr3_3:77621973-77621992 Msa0474720:intron 30.0%
!!! TCTTCTAGAACACTTTTTGT+TGG - chr3_3:77622235-77622254 Msa0474720:CDS 30.0%
TGATTTCTTACTATGACCTA+AGG - chr3_3:77622477-77622496 Msa0474720:CDS 30.0%
GATTTCTTACTATGACCTAA+GGG - chr3_3:77622478-77622497 Msa0474720:CDS 30.0%
!! CAATGAAAGCACTTCAAAAT+AGG - chr3_3:77622513-77622532 Msa0474720:CDS 30.0%
AAAATAGGACATTGAGTTCT+AGG - chr3_3:77622528-77622547 Msa0474720:CDS 30.0%
ACTAAACAAGATGATACCTT+TGG + chr3_3:77622578-77622597 None:intergenic 30.0%
! GACGAACTAAAACGTATTTT+TGG - chr3_3:77622853-77622872 Msa0474720:CDS 30.0%
AGAGGTAAGTTATTCTTTGT+TGG - chr3_3:77622894-77622913 Msa0474720:CDS 30.0%
TTGATATACAAGCACCAAAA+GGG + chr3_3:77622928-77622947 None:intergenic 30.0%
TTTGATATACAAGCACCAAA+AGG + chr3_3:77622929-77622948 None:intergenic 30.0%
GGTAACAAGAATAAATATGC+AGG + chr3_3:77623277-77623296 None:intergenic 30.0%
CATCTTATTCTTAAGACAGA+AGG - chr3_3:77623452-77623471 Msa0474720:CDS 30.0%
TTTAGAAGCTAAGATCTACT+TGG - chr3_3:77623507-77623526 Msa0474720:CDS 30.0%
TTTCATTGCATCAACATTAC+TGG + chr3_3:77623735-77623754 None:intergenic 30.0%
ATGGTGTTTGACAAATTGTA+AGG + chr3_3:77623827-77623846 None:intergenic 30.0%
!! AATATTGGCAGCCATTTTAA+TGG + chr3_3:77623846-77623865 None:intergenic 30.0%
ATTAAAATGGCTGCCAATAT+TGG - chr3_3:77623845-77623864 Msa0474720:CDS 30.0%
!! AACTTAGCAGATTTTAATGC+AGG - chr3_3:77623926-77623945 Msa0474720:CDS 30.0%
! GATTATCCATGAAGCTTTTT+AGG + chr3_3:77623968-77623987 None:intergenic 30.0%
! TTTTGAATTCCTAGGAATCT+AGG + chr3_3:77624094-77624113 None:intergenic 30.0%
! GTTACAGTTAATGACAGTTT+TGG - chr3_3:77624129-77624148 Msa0474720:intron 30.0%
AGTATCAGAGAATAAGCATT+TGG - chr3_3:77624241-77624260 Msa0474720:intron 30.0%
TTGGATTTCAATCTTTGTCT+TGG - chr3_3:77624260-77624279 Msa0474720:intron 30.0%
! ATATGATAAAGCTGATGATG+GGG + chr3_3:77624445-77624464 None:intergenic 30.0%
CATATGATAAAGCTGATGAT+GGG + chr3_3:77624446-77624465 None:intergenic 30.0%
ACATATGATAAAGCTGATGA+TGG + chr3_3:77624447-77624466 None:intergenic 30.0%
! ATCATCAGCTTTATCATATG+TGG - chr3_3:77624446-77624465 Msa0474720:CDS 30.0%
! AAAACGCCATCTTTTGTTAA+TGG - chr3_3:77624520-77624539 Msa0474720:CDS 30.0%
GAAAGACAACATTCTTACTT+GGG - chr3_3:77624664-77624683 Msa0474720:intron 30.0%
! AGCAACATGTTTTCTCATAT+TGG - chr3_3:77624778-77624797 Msa0474720:intron 30.0%
! AACATGTTTTCTCATATTGG+TGG - chr3_3:77624781-77624800 Msa0474720:intron 30.0%
! ACATGTTTTCTCATATTGGT+GGG - chr3_3:77624782-77624801 Msa0474720:intron 30.0%
AATTTCGACATTGAAGTCAT+GGG + chr3_3:77624883-77624902 None:intergenic 30.0%
AAATTTCGACATTGAAGTCA+TGG + chr3_3:77624884-77624903 None:intergenic 30.0%
! TTTTTATCATCAGCGTTGTT+CGG + chr3_3:77625026-77625045 None:intergenic 30.0%
CTAATGCATCAAAGTGAAAA+GGG + chr3_3:77625153-77625172 None:intergenic 30.0%
ACTAATGCATCAAAGTGAAA+AGG + chr3_3:77625154-77625173 None:intergenic 30.0%
! TACCTTAAACAGATTTTCCT+AGG - chr3_3:77625286-77625305 Msa0474720:intron 30.0%
ATATGTATTAATATCTCGGC+AGG - chr3_3:77625366-77625385 Msa0474720:intron 30.0%
!! AGTAAGTATTTGTTTGGTGT+TGG - chr3_3:77625472-77625491 Msa0474720:intron 30.0%
AACGTTTATCTTCATTCATC+AGG + chr3_3:77625824-77625843 None:intergenic 30.0%
CATCTGTATGGAATAGAATA+GGG + chr3_3:77625851-77625870 None:intergenic 30.0%
TAAAGAACAAGCAGATTTAC+CGG + chr3_3:77625891-77625910 None:intergenic 30.0%
AGCAACAGGAAAATAGTTAT+AGG + chr3_3:77625914-77625933 None:intergenic 30.0%
AATGCTAGTAGTTACATTAG+AGG - chr3_3:77626032-77626051 Msa0474720:intron 30.0%
GAAATAATTCTTACTTGAGC+TGG - chr3_3:77626171-77626190 Msa0474720:intron 30.0%
! TCACAATTTTGGACTTATAG+AGG - chr3_3:77626547-77626566 Msa0474720:five_prime_UTR 30.0%
AAACTTGTAAGATGGTAGAA+TGG + chr3_3:77626665-77626684 None:intergenic 30.0%
AGGTTGAAGAGAGAGAAAAT+GGG + chr3_3:77619221-77619240 None:intergenic 35.0%
ATCTGATATTGCAATGTGGA+AGG - chr3_3:77619328-77619347 Msa0474720:three_prime_UTR 35.0%
TGAATTCCTTATGCTGTAGA+CGG - chr3_3:77619395-77619414 Msa0474720:three_prime_UTR 35.0%
! TTTGGATTTTTCTGCTAGCT+TGG - chr3_3:77619484-77619503 Msa0474720:three_prime_UTR 35.0%
TTCCTGATCAAAAACCCAAA+TGG + chr3_3:77619593-77619612 None:intergenic 35.0%
AAGCTTACAATGTTCCACAT+CGG + chr3_3:77619762-77619781 None:intergenic 35.0%
TTGGCAATCAATTAGGTAGT+TGG - chr3_3:77619881-77619900 Msa0474720:intron 35.0%
CAATCAATTAGGTAGTTGGT+AGG - chr3_3:77619885-77619904 Msa0474720:intron 35.0%
TTCAACTAAACACTACCAGA+AGG + chr3_3:77619933-77619952 None:intergenic 35.0%
! TTCTGGTAGTGTTTAGTTGA+AGG - chr3_3:77619932-77619951 Msa0474720:intron 35.0%
! TGGAGTGTTAATGTCATAGT+AGG + chr3_3:77620686-77620705 None:intergenic 35.0%
GAGTGTTAACTATCTGTCTT+TGG + chr3_3:77620723-77620742 None:intergenic 35.0%
CAAATGTGAAACAGTGATCA+AGG + chr3_3:77620749-77620768 None:intergenic 35.0%
CAAGTAAACACACACGAATA+TGG + chr3_3:77621211-77621230 None:intergenic 35.0%
!! ATTTTCAGGGAAGAGTGAAA+TGG - chr3_3:77621303-77621322 Msa0474720:CDS 35.0%
! GATAAACTAGTCTGTGACAT+TGG + chr3_3:77621394-77621413 None:intergenic 35.0%
!! ATGTCACAGACTAGTTTATC+CGG - chr3_3:77621394-77621413 Msa0474720:CDS 35.0%
!!! TACGTTTTCTAAAACTTCCC+CGG + chr3_3:77621416-77621435 None:intergenic 35.0%
!! TTCCCATATATCTCTGAGAT+TGG - chr3_3:77621851-77621870 Msa0474720:intron 35.0%
!! TCCCATATATCTCTGAGATT+GGG - chr3_3:77621852-77621871 Msa0474720:intron 35.0%
ACCCAATCTCAGAGATATAT+GGG + chr3_3:77621856-77621875 None:intergenic 35.0%
TCTGATCAGAATATTACTGC+TGG - chr3_3:77621926-77621945 Msa0474720:intron 35.0%
AAATTGAGGCTGACACTATA+GGG - chr3_3:77621987-77622006 Msa0474720:intron 35.0%
!!! GATTTTGATTTGTTCAGCAG+TGG - chr3_3:77622100-77622119 Msa0474720:CDS 35.0%
CTTTCAGGAAAAAGAATCAG+TGG - chr3_3:77622151-77622170 Msa0474720:CDS 35.0%
TGTTTGTTCTTCCAGCAATA+TGG - chr3_3:77622407-77622426 Msa0474720:intron 35.0%
! GGTATTTATGCTGTTTGTCT+TGG - chr3_3:77622655-77622674 Msa0474720:intron 35.0%
TCTCAACCTGATGACATATT+AGG - chr3_3:77622759-77622778 Msa0474720:intron 35.0%
CTCAACCTGATGACATATTA+GGG - chr3_3:77622760-77622779 Msa0474720:intron 35.0%
GATTTCCCTAATATGTCATC+AGG + chr3_3:77622768-77622787 None:intergenic 35.0%
AATCCTACAGAGAAGGATAT+TGG - chr3_3:77622784-77622803 Msa0474720:intron 35.0%
TGATATACAAGCACCAAAAG+GGG + chr3_3:77622927-77622946 None:intergenic 35.0%
AGACATAACACTTAAGAAGC+TGG + chr3_3:77622960-77622979 None:intergenic 35.0%
TGCACATTCCATTCAATGAA+CGG + chr3_3:77623067-77623086 None:intergenic 35.0%
TGTTACTGATCACACAATCA+TGG - chr3_3:77623352-77623371 Msa0474720:intron 35.0%
TGAGTCATACTACAAAAGCA+GGG + chr3_3:77623381-77623400 None:intergenic 35.0%
TTGAGATTATGACCAAGATC+AGG + chr3_3:77623429-77623448 None:intergenic 35.0%
CACTAGACATAATTTACAGC+CGG - chr3_3:77623533-77623552 Msa0474720:intron 35.0%
!! TTATCGAAGAAAGCATTCGA+AGG + chr3_3:77623638-77623657 None:intergenic 35.0%
TATCGTGATGGTTTAGCTAA+TGG - chr3_3:77623797-77623816 Msa0474720:CDS 35.0%
!! TTAGCAGATTTTAATGCAGG+AGG - chr3_3:77623929-77623948 Msa0474720:CDS 35.0%
TCCTAGGAATTCAAAACCTT+TGG - chr3_3:77624098-77624117 Msa0474720:intron 35.0%
!!! TCCAAAGGTTTTGAATTCCT+AGG + chr3_3:77624102-77624121 None:intergenic 35.0%
! AATCTTTGTCTTGGTTCTCA+TGG - chr3_3:77624269-77624288 Msa0474720:intron 35.0%
! ATCTTTGTCTTGGTTCTCAT+GGG - chr3_3:77624270-77624289 Msa0474720:intron 35.0%
!! GGCTGAAAAGGTATCAAATT+TGG - chr3_3:77624336-77624355 Msa0474720:CDS 35.0%
! CAGCTTTATCATATGTGGAA+TGG - chr3_3:77624451-77624470 Msa0474720:CDS 35.0%
TAAGAATGTTGTCTTTCCCA+GGG + chr3_3:77624661-77624680 None:intergenic 35.0%
GGAAAGACAACATTCTTACT+TGG - chr3_3:77624663-77624682 Msa0474720:intron 35.0%
! AACATGTTGCTTGAAAGATC+CGG + chr3_3:77624769-77624788 None:intergenic 35.0%
! TTTTCTCATATTGGTGGGAA+TGG - chr3_3:77624787-77624806 Msa0474720:intron 35.0%
GAAGTTTCTCATTCGTTCAT+TGG + chr3_3:77624914-77624933 None:intergenic 35.0%
AAACAATTTGAACTCGACCT+AGG - chr3_3:77624976-77624995 Msa0474720:intron 35.0%
GATAGCGAGAAATACTTGTT+GGG + chr3_3:77625054-77625073 None:intergenic 35.0%
AGATAGCGAGAAATACTTGT+TGG + chr3_3:77625055-77625074 None:intergenic 35.0%
CACAGGCAAGTAAAAAGTAA+AGG + chr3_3:77625226-77625245 None:intergenic 35.0%
CTCCTAGGAAAATCTGTTTA+AGG + chr3_3:77625291-77625310 None:intergenic 35.0%
AGTAAAGCGTGCAAATTCTT+TGG - chr3_3:77625309-77625328 Msa0474720:intron 35.0%
TTGCAGAACAAGTGTAATGT+TGG - chr3_3:77625555-77625574 Msa0474720:CDS 35.0%
TTCATCAACATGATTGATCC+TGG - chr3_3:77625585-77625604 Msa0474720:CDS 35.0%
TGGAATGGAATTATTTGACC+AGG + chr3_3:77625606-77625625 None:intergenic 35.0%
TCAAATAATTCCATTCCACC+AGG - chr3_3:77625608-77625627 Msa0474720:CDS 35.0%
ATAAGAGTTCTCAAGTAACC+TGG + chr3_3:77625629-77625648 None:intergenic 35.0%
! AGTTAATCTGTTTCTTGTGC+AGG - chr3_3:77625689-77625708 Msa0474720:five_prime_UTR 35.0%
! AGGCTTTTCATGGGAAAAAA+TGG - chr3_3:77625709-77625728 Msa0474720:intron 35.0%
! GGCTTTTCATGGGAAAAAAT+GGG - chr3_3:77625710-77625729 Msa0474720:intron 35.0%
GGAGAAGTTTAACAGTGAAA+AGG - chr3_3:77625731-77625750 Msa0474720:intron 35.0%
! AGCAGATTTTCCTTGAATTC+GGG + chr3_3:77625775-77625794 None:intergenic 35.0%
! GAGCAGATTTTCCTTGAATT+CGG + chr3_3:77625776-77625795 None:intergenic 35.0%
CCATCTGTATGGAATAGAAT+AGG + chr3_3:77625852-77625871 None:intergenic 35.0%
CCTATTCTATTCCATACAGA+TGG - chr3_3:77625849-77625868 Msa0474720:intron 35.0%
GATATCTGTCAGAAGAATGT+CGG + chr3_3:77625955-77625974 None:intergenic 35.0%
GATATCATGCTTCGTATTTC+TGG - chr3_3:77625969-77625988 Msa0474720:intron 35.0%
TGTAACTACTAGCATTGTAC+AGG + chr3_3:77626028-77626047 None:intergenic 35.0%
ACTCTAATATTTGCACCCAA+GGG + chr3_3:77626272-77626291 None:intergenic 35.0%
TACTCTAATATTTGCACCCA+AGG + chr3_3:77626273-77626292 None:intergenic 35.0%
TGGGTGCAAATATTAGAGTA+AGG - chr3_3:77626273-77626292 Msa0474720:intron 35.0%
TGCAAATATTAGAGTAAGGC+CGG - chr3_3:77626277-77626296 Msa0474720:intron 35.0%
TTGAAGAATTCCCTTGACTA+CGG + chr3_3:77626334-77626353 None:intergenic 35.0%
TCAAGGGAATTCTTCAACTT+TGG - chr3_3:77626337-77626356 Msa0474720:intron 35.0%
TCGACCTTCAAAAACTTTCA+AGG + chr3_3:77626575-77626594 None:intergenic 35.0%
!! TTGAAAGTTTTTGAAGGTCG+AGG - chr3_3:77626574-77626593 Msa0474720:five_prime_UTR 35.0%
GTCTCTCTAAACTTGTAAGA+TGG + chr3_3:77626673-77626692 None:intergenic 35.0%
ATAGTGCATTGTGTGTTTCA+AGG - chr3_3:77626755-77626774 Msa0474720:five_prime_UTR 35.0%
TAGTGCATTGTGTGTTTCAA+GGG - chr3_3:77626756-77626775 Msa0474720:five_prime_UTR 35.0%
CTATATGTTGGGATTGTTGA+AGG - chr3_3:77626875-77626894 Msa0474720:five_prime_UTR 35.0%
! AAAAGGAGGTGTGTGTTAGT+TGG + chr3_3:77619041-77619060 None:intergenic 40.0%
TCAGACAAAGAGAAGAAGAG+AGG + chr3_3:77619126-77619145 None:intergenic 40.0%
AGAGAAAATGGGAAGAGTAG+AGG + chr3_3:77619210-77619229 None:intergenic 40.0%
GAGGTTGAAGAGAGAGAAAA+TGG + chr3_3:77619222-77619241 None:intergenic 40.0%
ATTGCAATGTGGAAGGAACA+AGG - chr3_3:77619335-77619354 Msa0474720:three_prime_UTR 40.0%
! GGAAGGAACAAGGTTTTTGT+TGG - chr3_3:77619345-77619364 Msa0474720:three_prime_UTR 40.0%
CAAAAACCGTCTACAGCATA+AGG + chr3_3:77619404-77619423 None:intergenic 40.0%
!! GTCCATTTGGGTTTTTGATC+AGG - chr3_3:77619588-77619607 Msa0474720:CDS 40.0%
! ATTTTGCGATAGAACCGATG+TGG - chr3_3:77619745-77619764 Msa0474720:intron 40.0%
CTAAACACTACCAGAAGGAA+AGG + chr3_3:77619928-77619947 None:intergenic 40.0%
!! GTATGGGTTGATGTTAGTAG+AGG - chr3_3:77620085-77620104 Msa0474720:CDS 40.0%
CAAGGTCACATGCTTGAAAA+AGG + chr3_3:77620200-77620219 None:intergenic 40.0%
TTCAACAAAGCTAGCAAGTG+AGG - chr3_3:77620249-77620268 Msa0474720:intron 40.0%
TGATGTTTCCTATGCTTCTG+AGG - chr3_3:77620381-77620400 Msa0474720:intron 40.0%
AGTACATGAGATCGAGAAGT+CGG + chr3_3:77620493-77620512 None:intergenic 40.0%
TTTCATGTGCAGAGGAATGT+TGG - chr3_3:77620563-77620582 Msa0474720:intron 40.0%
TGCAGAGGAATGTTGGATTA+AGG - chr3_3:77620570-77620589 Msa0474720:intron 40.0%
TGATGATTATCCACAAGGTG+AGG - chr3_3:77620610-77620629 Msa0474720:intron 40.0%
TAGAGTCCTATATGTCATGC+TGG - chr3_3:77620657-77620676 Msa0474720:intron 40.0%
AGGAAACCAGCATGACATAT+AGG + chr3_3:77620666-77620685 None:intergenic 40.0%
!! AACTAGAGAGGTATCAGGTA+AGG + chr3_3:77620851-77620870 None:intergenic 40.0%
!! TGTCACAGACTAGTTTATCC+GGG - chr3_3:77621395-77621414 Msa0474720:CDS 40.0%
TGAATTATCACCCGAGATCA+TGG - chr3_3:77621491-77621510 Msa0474720:CDS 40.0%
AAACCATATGAGCTAGATGC+TGG + chr3_3:77621535-77621554 None:intergenic 40.0%
AACAAGATTGTCACCAATGC+AGG - chr3_3:77621562-77621581 Msa0474720:intron 40.0%
!! AAAAGTTCCCTTTTCTGGTG+GGG + chr3_3:77621800-77621819 None:intergenic 40.0%
!! GAAAAGTTCCCTTTTCTGGT+GGG + chr3_3:77621801-77621820 None:intergenic 40.0%
! AGAAAAGTTCCCTTTTCTGG+TGG + chr3_3:77621802-77621821 None:intergenic 40.0%
CACCCAATCTCAGAGATATA+TGG + chr3_3:77621857-77621876 None:intergenic 40.0%
GGGTGTTTGTATGCATATCT+TGG - chr3_3:77621872-77621891 Msa0474720:intron 40.0%
GATTTGTATGGTTCTTCCTC+AGG + chr3_3:77621959-77621978 None:intergenic 40.0%
GAAATTGAGGCTGACACTAT+AGG - chr3_3:77621986-77622005 Msa0474720:intron 40.0%
AATTGAGGCTGACACTATAG+GGG - chr3_3:77621988-77622007 Msa0474720:intron 40.0%
GAAAACAGATCATCTTCGTC+GGG + chr3_3:77622022-77622041 None:intergenic 40.0%
GGAAAACAGATCATCTTCGT+CGG + chr3_3:77622023-77622042 None:intergenic 40.0%
! GACGAAGATGATCTGTTTTC+CGG - chr3_3:77622022-77622041 Msa0474720:CDS 40.0%
!! TTTGATTTGTTCAGCAGTGG+TGG - chr3_3:77622103-77622122 Msa0474720:CDS 40.0%
TTGGAAGGAGATGAACTTTC+AGG - chr3_3:77622136-77622155 Msa0474720:CDS 40.0%
AGGAAAAAGAATCAGTGGCT+TGG - chr3_3:77622156-77622175 Msa0474720:CDS 40.0%
! AAAAGAATCAGTGGCTTGGA+TGG - chr3_3:77622160-77622179 Msa0474720:CDS 40.0%
TACAGCGGTAGATGCTATAT+AGG - chr3_3:77622331-77622350 Msa0474720:CDS 40.0%
TTCGGATATCTCCATATTGC+TGG + chr3_3:77622421-77622440 None:intergenic 40.0%
ATGCTTGGAGGCAGTATAAA+GGG + chr3_3:77622444-77622463 None:intergenic 40.0%
!! GACATTGAGTTCTAGGAAAC+TGG - chr3_3:77622535-77622554 Msa0474720:CDS 40.0%
TTAGGGAAATCCTACAGAGA+AGG - chr3_3:77622777-77622796 Msa0474720:intron 40.0%
CAGATATCATCAGTGTACCA+TGG + chr3_3:77622810-77622829 None:intergenic 40.0%
CATGGTACACTGATGATATC+TGG - chr3_3:77622808-77622827 Msa0474720:intron 40.0%
GATATACAAGCACCAAAAGG+GGG + chr3_3:77622926-77622945 None:intergenic 40.0%
TTGAATGGAATGTGCATTGC+TGG - chr3_3:77623071-77623090 Msa0474720:CDS 40.0%
GTCATCCTAGGATTGCAATA+TGG - chr3_3:77623117-77623136 Msa0474720:CDS 40.0%
ATCCTAGGATTGCAATATGG+TGG - chr3_3:77623120-77623139 Msa0474720:CDS 40.0%
CTGAGTCATACTACAAAAGC+AGG + chr3_3:77623382-77623401 None:intergenic 40.0%
TATGACTCAGCCATCTCAAA+AGG - chr3_3:77623392-77623411 Msa0474720:CDS 40.0%
ATGACTCAGCCATCTCAAAA+GGG - chr3_3:77623393-77623412 Msa0474720:CDS 40.0%
!! TCATCTTGTCCCTTTTGAGA+TGG + chr3_3:77623405-77623424 None:intergenic 40.0%
AATAACTCCAGACGATAGTC+CGG + chr3_3:77623555-77623574 None:intergenic 40.0%
!! GCATCTGCTGTAAAAGTATC+TGG - chr3_3:77623704-77623723 Msa0474720:CDS 40.0%
! AAAGAATGAGGGTGCAATCT+TGG + chr3_3:77623770-77623789 None:intergenic 40.0%
GATACTCAGGCAAAGAATGA+GGG + chr3_3:77623781-77623800 None:intergenic 40.0%
TGTGGATCCAGTTCCAATAT+TGG + chr3_3:77623861-77623880 None:intergenic 40.0%
ATTCAGGGAATGATCTCAAC+TGG - chr3_3:77623902-77623921 Msa0474720:CDS 40.0%
TTCAGGGAATGATCTCAACT+GGG - chr3_3:77623903-77623922 Msa0474720:CDS 40.0%
AACGTGCCTAAAAAGCTTCA+TGG - chr3_3:77623959-77623978 Msa0474720:CDS 40.0%
AAATGGCATCCTAGATTCCT+AGG - chr3_3:77624082-77624101 Msa0474720:intron 40.0%
ACTGTAACAGTAGAGTCCAA+AGG + chr3_3:77624117-77624136 None:intergenic 40.0%
! TCTTTGTCTTGGTTCTCATG+GGG - chr3_3:77624271-77624290 Msa0474720:intron 40.0%
AGTATAAGCTGGGTAGTAAG+AGG - chr3_3:77624315-77624334 Msa0474720:CDS 40.0%
CCAACGCCATTAACAAAAGA+TGG + chr3_3:77624529-77624548 None:intergenic 40.0%
! CCATCTTTTGTTAATGGCGT+TGG - chr3_3:77624526-77624545 Msa0474720:CDS 40.0%
TCACATATTGACCACCATGT+TGG - chr3_3:77624610-77624629 Msa0474720:CDS 40.0%
GTAAGAATGTTGTCTTTCCC+AGG + chr3_3:77624662-77624681 None:intergenic 40.0%
!! AATCTAAAACCAGGAGCATC+AGG + chr3_3:77624697-77624716 None:intergenic 40.0%
!!! TGATGCTCCTGGTTTTAGAT+TGG - chr3_3:77624696-77624715 Msa0474720:intron 40.0%
!!! GATGCTCCTGGTTTTAGATT+GGG - chr3_3:77624697-77624716 Msa0474720:intron 40.0%
! AGAGAACCCAATCTAAAACC+AGG + chr3_3:77624706-77624725 None:intergenic 40.0%
!!! GGTTTTAGATTGGGTTCTCT+AGG - chr3_3:77624706-77624725 Msa0474720:intron 40.0%
! CTAGGAAATGCAGGTTTTCA+TGG - chr3_3:77624724-77624743 Msa0474720:intron 40.0%
AACGATTTGACATCCAGTGT+TGG - chr3_3:77624811-77624830 Msa0474720:intron 40.0%
ACGATTTGACATCCAGTGTT+GGG - chr3_3:77624812-77624831 Msa0474720:intron 40.0%
GCAAAAGAGCAAGACAAGAT+TGG + chr3_3:77625180-77625199 None:intergenic 40.0%
! TCTTGTCTTGCTCTTTTGCT+TGG - chr3_3:77625181-77625200 Msa0474720:intron 40.0%
AATTTGCACGCTTTACTCCT+AGG + chr3_3:77625306-77625325 None:intergenic 40.0%
! TTTCTTGTGCAGGCTTTTCA+TGG - chr3_3:77625699-77625718 Msa0474720:five_prime_UTR 40.0%
! TTCTTGTGCAGGCTTTTCAT+GGG - chr3_3:77625700-77625719 Msa0474720:intron 40.0%
CATTCATCAGGCTTGAATTC+TGG + chr3_3:77625812-77625831 None:intergenic 40.0%
CTGTATGGAATAGAATAGGG+CGG + chr3_3:77625848-77625867 None:intergenic 40.0%
GAATGTCGGTAATAAGCAGA+TGG + chr3_3:77625941-77625960 None:intergenic 40.0%
ATATTTGCACCCAAGGGAAA+AGG + chr3_3:77626266-77626285 None:intergenic 40.0%
GCAAATATTAGAGTAAGGCC+GGG - chr3_3:77626278-77626297 Msa0474720:intron 40.0%
! CCACTACTACGTAATTTTCC+CGG + chr3_3:77626299-77626318 None:intergenic 40.0%
TTCAACTTTGGCAAATGCAG+AGG - chr3_3:77626349-77626368 Msa0474720:intron 40.0%
TCAGTGTCTCTTGAAGAACT+TGG + chr3_3:77626401-77626420 None:intergenic 40.0%
CATTGAACTGTTAGTGCTTG+AGG + chr3_3:77626434-77626453 None:intergenic 40.0%
! ATACAATGACGGAGTTGACA+TGG + chr3_3:77626464-77626483 None:intergenic 40.0%
! GGAGCCTTGAAAGTTTTTGA+AGG - chr3_3:77626568-77626587 Msa0474720:five_prime_UTR 40.0%
CACACAATGCACTATCTCAA+GGG + chr3_3:77626750-77626769 None:intergenic 40.0%
ACACACAATGCACTATCTCA+AGG + chr3_3:77626751-77626770 None:intergenic 40.0%
TTGTTTGTATCCCTGAGCAT+TGG - chr3_3:77626832-77626851 Msa0474720:five_prime_UTR 40.0%
TATAAAGACGCCAATGCTCA+GGG + chr3_3:77626845-77626864 None:intergenic 40.0%
TATGTTGGGATTGTTGAAGG+AGG - chr3_3:77626878-77626897 Msa0474720:five_prime_UTR 40.0%
TTTGTGCTGTCCTTTCCTTC+TGG - chr3_3:77619915-77619934 Msa0474720:intron 45.0%
! CTTGGACTTTTCATGTGCAG+AGG - chr3_3:77620555-77620574 Msa0474720:intron 45.0%
AGTTGATTGACCTCACCTTG+TGG + chr3_3:77620623-77620642 None:intergenic 45.0%
! AACTTTTACTGTCGTTGCCC+AGG - chr3_3:77620904-77620923 Msa0474720:CDS 45.0%
!! GTCACAGACTAGTTTATCCG+GGG - chr3_3:77621396-77621415 Msa0474720:CDS 45.0%
!! GTACATTTTGGTGCACAAGC+TGG - chr3_3:77621433-77621452 Msa0474720:CDS 45.0%
AGATGCGCTGAAGGATTCAA+AGG - chr3_3:77621462-77621481 Msa0474720:CDS 45.0%
TGCACATCAGACCATGATCT+CGG + chr3_3:77621505-77621524 None:intergenic 45.0%
GATCATGGTCTGATGTGCAT+AGG - chr3_3:77621506-77621525 Msa0474720:intron 45.0%
! ATGCATATCTTGGTGCAGTG+AGG - chr3_3:77621882-77621901 Msa0474720:intron 45.0%
TCCTAAACCATCAGTGACAC+CGG + chr3_3:77622044-77622063 None:intergenic 45.0%
ATGGTGATCCTGCTTACTCT+GGG - chr3_3:77622179-77622198 Msa0474720:CDS 45.0%
TTAAAAGCCCCAGAGTAAGC+AGG + chr3_3:77622190-77622209 None:intergenic 45.0%
!!! GCTTACTCTGGGGCTTTTAA+AGG - chr3_3:77622190-77622209 Msa0474720:CDS 45.0%
TGCAGAAGACTCTGAGCTAA+AGG - chr3_3:77622273-77622292 Msa0474720:CDS 45.0%
TGAGCTAAAGGCTCTCTTTG+AGG - chr3_3:77622285-77622304 Msa0474720:CDS 45.0%
TGGAGGCAGTATAAAGGGTT+CGG + chr3_3:77622439-77622458 None:intergenic 45.0%
GATGCTTGGAGGCAGTATAA+AGG + chr3_3:77622445-77622464 None:intergenic 45.0%
CATAACAAACCCACGATGCT+TGG + chr3_3:77622459-77622478 None:intergenic 45.0%
! TTGCATTTTGTGCTGCCCTT+AGG + chr3_3:77622496-77622515 None:intergenic 45.0%
TGGCCAATATCCTTCTCTGT+AGG + chr3_3:77622790-77622809 None:intergenic 45.0%
ACAGAGAAGGATATTGGCCA+TGG - chr3_3:77622790-77622809 Msa0474720:intron 45.0%
GCTTCTCTCCGTTCATTGAA+TGG - chr3_3:77623056-77623075 Msa0474720:CDS 45.0%
AAGCAGATCAAGCTTGAACC+TGG - chr3_3:77623095-77623114 Msa0474720:CDS 45.0%
ATTGCAATCCTAGGATGACC+AGG + chr3_3:77623116-77623135 None:intergenic 45.0%
AGCCACCATATTGCAATCCT+AGG + chr3_3:77623125-77623144 None:intergenic 45.0%
GGACAAGATGAACCTGATCT+TGG - chr3_3:77623414-77623433 Msa0474720:CDS 45.0%
! TCGTCTGGAGTTATTGCATC+TGG - chr3_3:77623560-77623579 Msa0474720:intron 45.0%
! TCTGGAGTTATTGCATCTGG+TGG - chr3_3:77623563-77623582 Msa0474720:intron 45.0%
AGTATTTCCAACACCGCAAG+AGG - chr3_3:77623680-77623699 Msa0474720:CDS 45.0%
GTATTTCCAACACCGCAAGA+GGG - chr3_3:77623681-77623700 Msa0474720:CDS 45.0%
TATTTCCAACACCGCAAGAG+GGG - chr3_3:77623682-77623701 Msa0474720:CDS 45.0%
CGATACTCAGGCAAAGAATG+AGG + chr3_3:77623782-77623801 None:intergenic 45.0%
! TCTTTGCCTGAGTATCGTGA+TGG - chr3_3:77623785-77623804 Msa0474720:CDS 45.0%
GCTAAACCATCACGATACTC+AGG + chr3_3:77623794-77623813 None:intergenic 45.0%
ATGGCTGCCAATATTGGAAC+TGG - chr3_3:77623851-77623870 Msa0474720:CDS 45.0%
ATCTGATGGCAGGCATATTC+AGG - chr3_3:77623886-77623905 Msa0474720:CDS 45.0%
TCTGATGGCAGGCATATTCA+GGG - chr3_3:77623887-77623906 Msa0474720:CDS 45.0%
CTTTCCCTGTCATAGAGACA+AGG + chr3_3:77624022-77624041 None:intergenic 45.0%
TGGGTAGTAAGAGGCTGAAA+AGG - chr3_3:77624324-77624343 Msa0474720:CDS 45.0%
!! GATAAAGCTGATGATGGGGA+AGG + chr3_3:77624441-77624460 None:intergenic 45.0%
GCAATCTCCATCAAATGCTG+TGG - chr3_3:77624489-77624508 Msa0474720:CDS 45.0%
CTCCATCAAATGCTGTGGTT+TGG - chr3_3:77624494-77624513 Msa0474720:CDS 45.0%
TGCCAAACCACAGCATTTGA+TGG + chr3_3:77624499-77624518 None:intergenic 45.0%
TGGATCAGCACCAGTTGTTA+CGG - chr3_3:77624630-77624649 Msa0474720:intron 45.0%
! TTGGGTTCTCTAGGAAATGC+AGG - chr3_3:77624715-77624734 Msa0474720:intron 45.0%
! ATGCAGGTTTTCATGGTAGC+TGG - chr3_3:77624731-77624750 Msa0474720:intron 45.0%
! ATGTTGCTTGAAAGATCCGG+AGG + chr3_3:77624766-77624785 None:intergenic 45.0%
AAGACATGTGACAACCGCTT+AGG + chr3_3:77624847-77624866 None:intergenic 45.0%
CAGCCATAGATGAGAGTTGT+CGG - chr3_3:77625411-77625430 Msa0474720:intron 45.0%
AGCCATAGATGAGAGTTGTC+GGG - chr3_3:77625412-77625431 Msa0474720:intron 45.0%
TCTCAAGTAACCTGGTGGAA+TGG + chr3_3:77625621-77625640 None:intergenic 45.0%
AGAGTTCTCAAGTAACCTGG+TGG + chr3_3:77625626-77625645 None:intergenic 45.0%
CTTGCATATGCCCGAATTCA+AGG - chr3_3:77625762-77625781 Msa0474720:intron 45.0%
CAGCATTTGGACCATCTGTA+TGG + chr3_3:77625863-77625882 None:intergenic 45.0%
CATACAGATGGTCCAAATGC+TGG - chr3_3:77625861-77625880 Msa0474720:intron 45.0%
TTTACCGGATCACCAGCATT+TGG + chr3_3:77625876-77625895 None:intergenic 45.0%
AAGCAGATGGAGATAGCAAC+AGG + chr3_3:77625928-77625947 None:intergenic 45.0%
CCGGGAAAATTACGTAGTAG+TGG - chr3_3:77626296-77626315 Msa0474720:intron 45.0%
ATTACGTAGTAGTGGCAACG+AGG - chr3_3:77626304-77626323 Msa0474720:intron 45.0%
AATGCAGAGGAGTTTGCAAG+TGG - chr3_3:77626362-77626381 Msa0474720:intron 45.0%
TGTGTGAGAGAGAGAAGAGT+TGG - chr3_3:77626501-77626520 Msa0474720:five_prime_UTR 45.0%
! GAAACGAGGGCTCACAATTT+TGG - chr3_3:77626536-77626555 Msa0474720:five_prime_UTR 45.0%
TGAAGGTCGAGGTACATAAC+TGG - chr3_3:77626585-77626604 Msa0474720:five_prime_UTR 45.0%
CTATAAAGACGCCAATGCTC+AGG + chr3_3:77626846-77626865 None:intergenic 45.0%
!! CTGAGCATTGGCGTCTTTAT+AGG - chr3_3:77626844-77626863 Msa0474720:five_prime_UTR 45.0%
!!! TATTATTTATATTGATTAAT+TGG - chr3_3:77625259-77625278 Msa0474720:intron 5.0%
AAACCAAACCAGAGAGCGAC+CGG - chr3_3:77619156-77619175 Msa0474720:three_prime_UTR 50.0%
GAAGAGTAGAGGCGAATCTC+CGG + chr3_3:77619199-77619218 None:intergenic 50.0%
AAGCAGTAGTAACACCCCTC+TGG + chr3_3:77620345-77620364 None:intergenic 50.0%
TTTACTGTCGTTGCCCAGGA+TGG - chr3_3:77620908-77620927 Msa0474720:CDS 50.0%
AGTGAAATGGCAGCTTCACC+TGG - chr3_3:77621316-77621335 Msa0474720:CDS 50.0%
GAAGTGTGCAAAATGCCTCC+AGG + chr3_3:77621337-77621356 None:intergenic 50.0%
!! TTTTGGTGCACAAGCTGGCA+TGG - chr3_3:77621438-77621457 Msa0474720:CDS 50.0%
GCACATCAGACCATGATCTC+GGG + chr3_3:77621504-77621523 None:intergenic 50.0%
! CAGCCAGCATCTAGCTCATA+TGG - chr3_3:77621529-77621548 Msa0474720:intron 50.0%
! TCTTGGTGCAGTGAGGTTCT+TGG - chr3_3:77621889-77621908 Msa0474720:intron 50.0%
! CTTGGTGCAGTGAGGTTCTT+GGG - chr3_3:77621890-77621909 Msa0474720:intron 50.0%
GCAGTGAGGTTCTTGGGAAA+TGG - chr3_3:77621896-77621915 Msa0474720:intron 50.0%
!! TACTGCTGGTTCTCTTCCTG+AGG - chr3_3:77621940-77621959 Msa0474720:intron 50.0%
ACAGATCATCTTCGTCGGGA+AGG + chr3_3:77622018-77622037 None:intergenic 50.0%
!!! CTGTTTTCCGGTGTCACTGA+TGG - chr3_3:77622034-77622053 Msa0474720:CDS 50.0%
!! TCCGGTGTCACTGATGGTTT+AGG - chr3_3:77622040-77622059 Msa0474720:CDS 50.0%
! GATTTGTTCAGCAGTGGTGG+AGG - chr3_3:77622106-77622125 Msa0474720:CDS 50.0%
GATGGTGATCCTGCTTACTC+TGG - chr3_3:77622178-77622197 Msa0474720:CDS 50.0%
TGGTGATCCTGCTTACTCTG+GGG - chr3_3:77622180-77622199 Msa0474720:CDS 50.0%
! TATACTGCCTCCAAGCATCG+TGG - chr3_3:77622446-77622465 Msa0474720:intron 50.0%
! ATACTGCCTCCAAGCATCGT+GGG - chr3_3:77622447-77622466 Msa0474720:intron 50.0%
AACAAACCCACGATGCTTGG+AGG + chr3_3:77622456-77622475 None:intergenic 50.0%
!!! TGTTGGTTTTCGCCCCCTTT+TGG - chr3_3:77622911-77622930 Msa0474720:CDS 50.0%
AGCTTGAACCTGGTCATCCT+AGG - chr3_3:77623105-77623124 Msa0474720:CDS 50.0%
TTTACAGCCGGACTATCGTC+TGG - chr3_3:77623545-77623564 Msa0474720:intron 50.0%
GGAGTTATTGCATCTGGTGG+AGG - chr3_3:77623566-77623585 Msa0474720:intron 50.0%
TATTGCATCTGGTGGAGGCT+TGG - chr3_3:77623571-77623590 Msa0474720:intron 50.0%
TCTGGTGGAGGCTTGGAAAA+TGG - chr3_3:77623578-77623597 Msa0474720:intron 50.0%
AAGGCAGCTGTGATGCAGAT+AGG + chr3_3:77623619-77623638 None:intergenic 50.0%
!! GGATCCACAGAAGCATCTGA+TGG - chr3_3:77623872-77623891 Msa0474720:CDS 50.0%
!! GTTAATGGCGTTGGTTCTCC+TGG - chr3_3:77624535-77624554 Msa0474720:CDS 50.0%
GATGCTCTCAGCATATGAGC+CGG + chr3_3:77624592-77624611 None:intergenic 50.0%
!! CAACTGGTGCTGATCCAACA+TGG + chr3_3:77624627-77624646 None:intergenic 50.0%
GGATCAGCACCAGTTGTTAC+GGG - chr3_3:77624631-77624650 Msa0474720:intron 50.0%
AGTTGTTACGGGATCACCCT+GGG - chr3_3:77624642-77624661 Msa0474720:intron 50.0%
! TTGACATCCAGTGTTGGGCA+TGG - chr3_3:77624817-77624836 Msa0474720:intron 50.0%
GGTTGTCACATGTCTTCCCT+GGG - chr3_3:77624851-77624870 Msa0474720:intron 50.0%
AAGTCATGGGAAGTCTCCCA+GGG + chr3_3:77624870-77624889 None:intergenic 50.0%
GCCATAGATGAGAGTTGTCG+GGG - chr3_3:77625413-77625432 Msa0474720:intron 50.0%
TCCCCGACAACTCTCATCTA+TGG + chr3_3:77625417-77625436 None:intergenic 50.0%
TGGTCCAAATGCTGGTGATC+CGG - chr3_3:77625869-77625888 Msa0474720:intron 50.0%
!! GGTCGCTCTCTGGTTTGGTT+TGG + chr3_3:77619157-77619176 None:intergenic 55.0%
GAAATGGCAGCTTCACCTGG+AGG - chr3_3:77621319-77621338 Msa0474720:CDS 55.0%
TGGCATGGTAGATGCGCTGA+AGG - chr3_3:77621453-77621472 Msa0474720:CDS 55.0%
GCCAGAACCCCACCAGAAAA+GGG - chr3_3:77621790-77621809 Msa0474720:intron 55.0%
!! TCCCTTTTCTGGTGGGGTTC+TGG + chr3_3:77621794-77621813 None:intergenic 55.0%
TACAGCAGATGCCCCTCTTG+CGG + chr3_3:77623696-77623715 None:intergenic 55.0%
CCTGCCATCAGATGCTTCTG+TGG + chr3_3:77623879-77623898 None:intergenic 55.0%
!! CCACAGAAGCATCTGATGGC+AGG - chr3_3:77623876-77623895 Msa0474720:CDS 55.0%
CTAGGCATCTGAGGAAGACC+AGG + chr3_3:77624556-77624575 None:intergenic 55.0%
CTGGGAAAGCTAGGCATCTG+AGG + chr3_3:77624565-77624584 None:intergenic 55.0%
! CTCAGATGCCTAGCTTTCCC+AGG - chr3_3:77624563-77624582 Msa0474720:CDS 55.0%
AGCATATGAGCCGGTGTCCT+GGG + chr3_3:77624583-77624602 None:intergenic 55.0%
!! CTGGTGCTGATCCAACATGG+TGG + chr3_3:77624624-77624643 None:intergenic 55.0%
CAGGGTGATCCCGTAACAAC+TGG + chr3_3:77624643-77624662 None:intergenic 55.0%
CAGTTGTTACGGGATCACCC+TGG - chr3_3:77624641-77624660 Msa0474720:intron 55.0%
TAGCTGGCAGTTGCATCCTC+CGG - chr3_3:77624747-77624766 Msa0474720:intron 55.0%
TTGGGCATGGCTCTCCTAAG+CGG - chr3_3:77624830-77624849 Msa0474720:intron 55.0%
CGGTTGTCACATGTCTTCCC+TGG - chr3_3:77624850-77624869 Msa0474720:intron 55.0%
GAAGTCATGGGAAGTCTCCC+AGG + chr3_3:77624871-77624890 None:intergenic 55.0%
TGTCTTCCCCACGCGATATG+CGG + chr3_3:77625002-77625021 None:intergenic 55.0%
! GTGCAGGAGCCTTTTCCCTT+GGG - chr3_3:77626254-77626273 Msa0474720:intron 55.0%
AACGAGGAGAGCCGTAGTCA+AGG - chr3_3:77626320-77626339 Msa0474720:intron 55.0%
ACGAGGAGAGCCGTAGTCAA+GGG - chr3_3:77626321-77626340 Msa0474720:intron 55.0%
GAGAGAAGAGTTGGAGCAGC+CGG - chr3_3:77626510-77626529 Msa0474720:five_prime_UTR 55.0%
TGTGAGCCCTCGTTTCCTAC+CGG + chr3_3:77626532-77626551 None:intergenic 55.0%
GGCGAGGTTGTTATGCTCGC+CGG + chr3_3:77619178-77619197 None:intergenic 60.0%
GGCGAGCATAACAACCTCGC+CGG - chr3_3:77619177-77619196 Msa0474720:three_prime_UTR 60.0%
GCTTTCACGTGCGCCTGCAT+TGG + chr3_3:77621578-77621597 None:intergenic 60.0%
CGCCAGAACCCCACCAGAAA+AGG - chr3_3:77621789-77621808 Msa0474720:intron 60.0%
! GTTCAGCAGTGGTGGAGGCA+TGG - chr3_3:77622111-77622130 Msa0474720:CDS 60.0%
! CAGTGGTGGAGGCATGGAGT+TGG - chr3_3:77622117-77622136 Msa0474720:CDS 60.0%
! GGTGGAGGCATGGAGTTGGA+AGG - chr3_3:77622121-77622140 Msa0474720:CDS 60.0%
AGATGCCCCTCTTGCGGTGT+TGG + chr3_3:77623690-77623709 None:intergenic 60.0%
! GCCTAGCTTTCCCAGGACAC+CGG - chr3_3:77624570-77624589 Msa0474720:CDS 60.0%
CAGCATATGAGCCGGTGTCC+TGG + chr3_3:77624584-77624603 None:intergenic 60.0%
GGAGAGTCTCCTGATGCTCC+TGG - chr3_3:77624685-77624704 Msa0474720:intron 60.0%
AGGAGAGCCATGCCCAACAC+TGG + chr3_3:77624827-77624846 None:intergenic 60.0%
ACCTAGGCCGCATATCGCGT+GGG - chr3_3:77624992-77625011 Msa0474720:intron 60.0%
! CGTGCAGGAGCCTTTTCCCT+TGG - chr3_3:77626253-77626272 Msa0474720:intron 60.0%
GAAGAGTTGGAGCAGCCGGT+AGG - chr3_3:77626514-77626533 Msa0474720:five_prime_UTR 60.0%
GAGCAGCCGGTAGGAAACGA+GGG - chr3_3:77626523-77626542 Msa0474720:five_prime_UTR 60.0%
TCGCCGGTCGCTCTCTGGTT+TGG + chr3_3:77619162-77619181 None:intergenic 65.0%
TATGCTCGCCGGTCGCTCTC+TGG + chr3_3:77619167-77619186 None:intergenic 65.0%
GTAGAGGCGAATCTCCGGCG+AGG + chr3_3:77619194-77619213 None:intergenic 65.0%
CGAACGTGTGTGGGGGTGGT+GGG + chr3_3:77621763-77621782 None:intergenic 65.0%
GCCGGTGTCCTGGGAAAGCT+AGG + chr3_3:77624574-77624593 None:intergenic 65.0%
GACCTAGGCCGCATATCGCG+TGG - chr3_3:77624991-77625010 Msa0474720:intron 65.0%
CCTAGGCCGCATATCGCGTG+GGG - chr3_3:77624993-77625012 Msa0474720:intron 65.0%
GGAGCAGCCGGTAGGAAACG+AGG - chr3_3:77626522-77626541 Msa0474720:five_prime_UTR 65.0%
GCGAACGTGTGTGGGGGTGG+TGG + chr3_3:77621764-77621783 None:intergenic 70.0%
CGTGCGAACGTGTGTGGGGG+TGG + chr3_3:77621767-77621786 None:intergenic 70.0%
GCGCGTGCGAACGTGTGTGG+GGG + chr3_3:77621770-77621789 None:intergenic 70.0%
CGCGCGTGCGAACGTGTGTG+GGG + chr3_3:77621771-77621790 None:intergenic 70.0%
GCGCGCGTGCGAACGTGTGT+GGG + chr3_3:77621772-77621791 None:intergenic 70.0%
CCCCACGCGATATGCGGCCT+AGG + chr3_3:77624996-77625015 None:intergenic 70.0%
GGCGCGCGTGCGAACGTGTG+TGG + chr3_3:77621773-77621792 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 77619017 77626934 77619017 ID=Msa0474720;Name=Msa0474720
chr3_3 mRNA 77619017 77626934 77619017 ID=Msa0474720-mRNA-1;Parent=Msa0474720;Name=Msa0474720-mRNA-1;_AED=0.11;_eAED=0.11;_QI=601|1|1|1|0.92|0.86|15|510|968
chr3_3 exon 77619017 77619691 77619017 ID=Msa0474720-mRNA-1:exon:20834;Parent=Msa0474720-mRNA-1
chr3_3 exon 77620061 77620240 77620061 ID=Msa0474720-mRNA-1:exon:20833;Parent=Msa0474720-mRNA-1
chr3_3 exon 77620322 77620390 77620322 ID=Msa0474720-mRNA-1:exon:20832;Parent=Msa0474720-mRNA-1
chr3_3 exon 77620479 77620563 77620479 ID=Msa0474720-mRNA-1:exon:20831;Parent=Msa0474720-mRNA-1
chr3_3 exon 77620893 77621523 77620893 ID=Msa0474720-mRNA-1:exon:20830;Parent=Msa0474720-mRNA-1
chr3_3 exon 77622001 77622399 77622001 ID=Msa0474720-mRNA-1:exon:20829;Parent=Msa0474720-mRNA-1
chr3_3 exon 77622477 77622559 77622477 ID=Msa0474720-mRNA-1:exon:20828;Parent=Msa0474720-mRNA-1
chr3_3 exon 77622813 77622961 77622813 ID=Msa0474720-mRNA-1:exon:20827;Parent=Msa0474720-mRNA-1
chr3_3 exon 77623054 77623170 77623054 ID=Msa0474720-mRNA-1:exon:20826;Parent=Msa0474720-mRNA-1
chr3_3 exon 77623371 77623529 77623371 ID=Msa0474720-mRNA-1:exon:20825;Parent=Msa0474720-mRNA-1
chr3_3 exon 77623645 77624051 77623645 ID=Msa0474720-mRNA-1:exon:20824;Parent=Msa0474720-mRNA-1
chr3_3 exon 77624311 77624640 77624311 ID=Msa0474720-mRNA-1:exon:20823;Parent=Msa0474720-mRNA-1
chr3_3 exon 77625325 77625376 77625325 ID=Msa0474720-mRNA-1:exon:20822;Parent=Msa0474720-mRNA-1
chr3_3 exon 77625549 77625718 77625549 ID=Msa0474720-mRNA-1:exon:20821;Parent=Msa0474720-mRNA-1
chr3_3 exon 77626423 77626934 77626423 ID=Msa0474720-mRNA-1:exon:20820;Parent=Msa0474720-mRNA-1
chr3_3 five_prime_UTR 77626423 77626934 77626423 ID=Msa0474720-mRNA-1:five_prime_utr;Parent=Msa0474720-mRNA-1
chr3_3 five_prime_UTR 77625630 77625718 77625630 ID=Msa0474720-mRNA-1:five_prime_utr;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77625549 77625629 77625549 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77625325 77625376 77625325 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77624311 77624640 77624311 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77623645 77624051 77623645 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77623371 77623529 77623371 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77623054 77623170 77623054 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77622813 77622961 77622813 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77622477 77622559 77622477 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77622001 77622399 77622001 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77620893 77621523 77620893 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77620479 77620563 77620479 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77620322 77620390 77620322 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77620061 77620240 77620061 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 CDS 77619527 77619691 77619527 ID=Msa0474720-mRNA-1:cds;Parent=Msa0474720-mRNA-1
chr3_3 three_prime_UTR 77619017 77619526 77619017 ID=Msa0474720-mRNA-1:three_prime_utr;Parent=Msa0474720-mRNA-1
Gene Sequence

>Msa0474720

ATGCCTTTTGAAATAATGAACCAGAGGGGTGTTACTACTGCTTCATCCCATCTTTATGATGATGTTTCCTATGCTTCTGAGAGGAATGTTGGATTAAGGAAGCCAAAATCTATTCATGATGATTATCCACAAGGGAAGAGTGAAATGGCAGCTTCACCTGGAGGCATTTTGCACACTTCATCAACCCTCGAAAGAAATGCAAAAATAGGCTTGCCAATGTCACAGACTAGTTTATCCGGGGAAGTTTTAGAAAACGTACATTTTGGTGCACAAGCTGGCATGGTAGATGCGCTGAAGGATTCAAAGGAATCTTTGAATTATCACCCGAGATCATGGTCTGATGTGCATAGGCAGCCAGCATCTAGCTCATATGGTTTAATTGGGAACAAGATTGTCACCAATGCAGGCGCACGTGAAAGCAGTCTATTCTCAAGCTCACTGTCCGATATGTTTAGCCAAAAGTTGAGGTTCTTGGGAAATGGTGTTCAGTCTGATCAGAATATTACTGCTGGTTCTCTTCCTGAGGAAGAACCATACAAATCTCTTGAAGAAATTGAGGCTGACACTATAGGGGATCTCCTTCCCGACGAAGATGATCTGTTTTCCGGTGTCACTGATGGTTTAGGAAGCAGTGCTCATGCTAGAGCAAGTGATGATTTTGAAGATTTTGATTTGTTCAGCAGTGGTGGAGGCATGGAGTTGGAAGGAGATGAACTTTCAGGAAAAAGAATCAGTGGCTTGGATGGTGATCCTGCTTACTCTGGGGCTTTTAAAGGCAAAAGTTCTTTTGGTGAACAATCTTCTAGAACACTTTTTGTTGGAAACATTACTAGCAATGCAGAAGACTCTGAGCTAAAGGCTCTCTTTGAGCAATATGGAGATATCCGAACCCTTTATACTGCCTCCAAGCATCGTGGGTTTGTTATGATTTCTTACTATGACCTAAGGGCAGCACAAAATGCAATGAAAGCACTTCAAAATAGGACATTGAGTTCTAGGAAACTGGATATACGTTATTCAATTCCAAAGGGAAATCCTACAGAGAAGGATATTGGCCATGGTACACTGATGATATCTGGTCTTGATTCATCTGTTTTGAAAGACGAACTAAAACGTATTTTTGGATTTTATGGAGAAATCAAAGAGATCTATGAATATCCAGAGATGAATCATATCAAATATATTGAATTTTATGATGTTCGAGGTGCAGAAGCTTCTCTCCGTTCATTGAATGGAATGTGCATTGCTGGAAAGCAGATCAAGCTTGAACCTGGTCATCCTAGGATTGCAATATGTATGACTCAGCCATCTCAAAAGGGACAAGATGAACCTGATCTTGGTCATAATCTCAATGACATCTTATTCTTAAGACAGAAGGCCGGACTATCGTCTGGAGTTATTGCATCTGGTGGAGGCTTGGAAAATGGATATAATCAAAGATTCCTATCTGCATCACAGCTGCCTTCGAATGCTTTCTTCGATAACACAAATTTTCACGTGAATTCTAGTATTTCCAACACCGCAAGAGGGGCATCTGCTGTAAAAGTATCTGGTGACTCCAGTAATGTTGATGCAATGAAATTTGCATCTATTCCAAGATTGCACCCTCATTCTTTGCCTGAGTATCGTGATGGTTTAGCTAATGGCAGTCCTTACAATTTGTCAAACACCATTAAAATGGCTGCCAATATTGGAACTGGATCCACAGAAGCATCTGATGGCAGGCATATTCAGGGAATGATCTCAACTGGGAACTTAGCAGATTTTAATGCAGGAGGAAATGGGAGCCTTCCCCATCATCAGCTTTATCATATGTGGAATGGCTCAAACTTGCGTCAGCAATCTCCATCAAATGCTGTGGTTTGGCAGAAAACGCCATCTTTTGTTAATGGCGTTGGTTCTCCTGGTCTTCCTCAGATGCCTAGCTTTCCCAGGACACCGGCTCATATGCTGAGAGCATCACATATTGACCACCATGTTGGATCAGCACCAGTTGTTACGGGATCACCCTGGGAAAGACAACATTCTTACTTGGGAGAGTCTCCTGATGCTCCTGGTTTTAGATTGGGTTCTCTAGGAAATGCAGGTTTTCATGGTAGCTGGCAGTTGCATCCTCCGGATCTTTCAAGCAACATGTTTTCTCATATTGGTGGGAATGGTAACGATTTGACATCCAGTGTTGGGCATGGCTCTCCTAAGCGGTTGTCACATGTCTTCCCTGGGAGACTTCCCATGACTTCAATGTCGAAATTTGATTCTACCAATGAACGAATGAGAAACTTCTATCATCGTAGAAGTGAAGCGAACAATAACAATGCTGATAAAAAACAATTTGAACTCGACCTAGGCCGCATATCGCGTGGGGAAGACAACCGAACAACGCTGATGATAAAAAATATTCCCAACAAGTATACTTCAAAGATGCTTCTTACAGCCATAGATGAGAGTTGTCGGGGAACTTATGATTTTCTGTATTTGCCAATTGATTTCAAAAACAAGTGTAATGTTGGCTATGCATTCATCAACATGATTGATCCTGGTCAAATAATTCCATTCCACCAGGCTTTTCATGGGAAAAAATGGGAGAAGTTTAACAGTGAAAAGGTAGCAGTACTTGCATATGCCCGAATTCAAGGAAAATCTGCTCTTATTGCTCATTTCCAGAATTCAAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTCTATTCCATACAGATGGTCCAAATGCTGGTGATCCGGAGCCTTTTCCCTTGGGTGCAAATATTAGAGTAAGGCCGGGAAAATTACGTAGTAGTGGCAACGAGGAGAGCCGTAGTCAAGGGAATTCTTCAACTTTGGCAAATGCAGAGGAGTTTGCAAGTGGAATAGATTCTTCACCAAGTTCTTCAAGAGACACTGACTGA
Protein sequence

>Msa0474720

MPFEIMNQRGVTTASSHLYDDVSYASERNVGLRKPKSIHDDYPQGKSEMAASPGGILHTSSTLERNAKIGLPMSQTSLSGEVLENVHFGAQAGMVDALKDSKESLNYHPRSWSDVHRQPASSSYGLIGNKIVTNAGARESSLFSSSLSDMFSQKLRFLGNGVQSDQNITAGSLPEEEPYKSLEEIEADTIGDLLPDEDDLFSGVTDGLGSSAHARASDDFEDFDLFSSGGGMELEGDELSGKRISGLDGDPAYSGAFKGKSSFGEQSSRTLFVGNITSNAEDSELKALFEQYGDIRTLYTASKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSSVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLRSLNGMCIAGKQIKLEPGHPRIAICMTQPSQKGQDEPDLGHNLNDILFLRQKAGLSSGVIASGGGLENGYNQRFLSASQLPSNAFFDNTNFHVNSSISNTARGASAVKVSGDSSNVDAMKFASIPRLHPHSLPEYRDGLANGSPYNLSNTIKMAANIGTGSTEASDGRHIQGMISTGNLADFNAGGNGSLPHHQLYHMWNGSNLRQQSPSNAVVWQKTPSFVNGVGSPGLPQMPSFPRTPAHMLRASHIDHHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHIGGNGNDLTSSVGHGSPKRLSHVFPGRLPMTSMSKFDSTNERMRNFYHRRSEANNNNADKKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYDFLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGANIRVRPGKLRSSGNEESRSQGNSSTLANAEEFASGIDSSPSSSRDTD*