Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985440 | XP_003620539.1 | 89.855 | 138 | 9 | 2 | 1 | 133 | 1 | 138 | 3.05e-82 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985440 | sp|Q9SQR3|D14_ARATH | 46.457 | 127 | 63 | 3 | 10 | 133 | 1 | 125 | 1.62e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985440 | G7KNK3 | 89.855 | 138 | 9 | 2 | 1 | 133 | 1 | 138 | 1.46e-82 | 254 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0899130 | Msa0985440 | 0.868676 | 5.470667e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985440 | MtrunA17_Chr6g0485021 | 89.855 | 138 | 9 | 2 | 1 | 133 | 1 | 138 | 2.80e-86 | 254 |
| Msa0985440 | MtrunA17_Chr3g0093821 | 58.140 | 129 | 49 | 2 | 9 | 133 | 1 | 128 | 1.29e-50 | 162 |
| Msa0985440 | MtrunA17_Chr1g0152551 | 49.194 | 124 | 57 | 3 | 20 | 140 | 10 | 130 | 1.94e-37 | 129 |
| Msa0985440 | MtrunA17_Chr5g0401521 | 45.690 | 116 | 59 | 2 | 21 | 133 | 9 | 123 | 1.05e-31 | 115 |
| Msa0985440 | MtrunA17_Chr4g0053741 | 46.269 | 67 | 36 | 0 | 67 | 133 | 6 | 72 | 8.37e-16 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0985440 | AT3G24420.1 | 54.331 | 127 | 53 | 2 | 11 | 133 | 5 | 130 | 1.04e-46 | 153 |
| Msa0985440 | AT3G03990.1 | 46.457 | 127 | 63 | 3 | 10 | 133 | 1 | 125 | 1.65e-35 | 124 |
| Msa0985440 | AT4G37470.1 | 42.241 | 116 | 63 | 2 | 21 | 133 | 9 | 123 | 1.60e-30 | 111 |
Find 187 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACCATCCTTCAACTTTA+AGG | 0.056428 | 6_4:+31968858 | Msa0985440:three_prime_UTR |
| AAAGATTAAATTATGATATT+TGG | 0.095068 | 6_4:+31971116 | Msa0985440:three_prime_UTR |
| CATTGAGGTTCTTGATCTTT+TGG | 0.196304 | 6_4:-31968420 | None:intergenic |
| TGAATTCAAAGATCAGTTTA+AGG | 0.208187 | 6_4:+31968690 | Msa0985440:three_prime_UTR |
| ATTGGAGTCTTTCATGAATT+AGG | 0.214877 | 6_4:+31969021 | Msa0985440:three_prime_UTR |
| CCATTTAGGTTGGTGTTTAA+TGG | 0.218760 | 6_4:+31968796 | Msa0985440:three_prime_UTR |
| TGTTTAGTTGAGCACGTATC+TGG | 0.220233 | 6_4:-31971053 | None:intergenic |
| AGATGACTTGATCAGTTTAT+TGG | 0.223698 | 6_4:+31965541 | Msa0985440:CDS |
| CCATTAAACACCAACCTAAA+TGG | 0.267771 | 6_4:-31968796 | None:intergenic |
| CTGTTCTGTTCAAGCAATTA+AGG | 0.271002 | 6_4:+31970474 | Msa0985440:three_prime_UTR |
| TATTCACAATGCTAAGATTA+AGG | 0.272964 | 6_4:+31969282 | Msa0985440:three_prime_UTR |
| ACATTAGGAGGATGATATTC+TGG | 0.277037 | 6_4:+31970629 | Msa0985440:intron |
| TCAAGGACCTCGGGGAATTC+AGG | 0.277487 | 6_4:-31969458 | None:intergenic |
| GGAAAATACAAATAAACTTC+TGG | 0.281173 | 6_4:+31969070 | Msa0985440:three_prime_UTR |
| ACCTCAAACATTGTTGCATT+TGG | 0.297599 | 6_4:+31971254 | Msa0985440:three_prime_UTR |
| AAGCAACTGATCATCCATTT+AGG | 0.298461 | 6_4:+31968782 | Msa0985440:three_prime_UTR |
| CCAGGATGAAGAATGCTTAA+AGG | 0.304893 | 6_4:-31967642 | None:intergenic |
| ACACAACCACACTTTCTCTT+TGG | 0.308028 | 6_4:-31967315 | None:intergenic |
| TTCAAGAGGCTTATTCTTGT+TGG | 0.312605 | 6_4:+31965653 | Msa0985440:CDS |
| CTTAAAGTTGAAGGATGGTT+TGG | 0.316006 | 6_4:-31968857 | None:intergenic |
| ATTTGGAATCATCTTAACTA+TGG | 0.318883 | 6_4:+31971271 | Msa0985440:three_prime_UTR |
| ATTACCCTTGTTTGAATTCA+AGG | 0.330078 | 6_4:-31969475 | None:intergenic |
| AGACTTTGGTCTTCAATTCC+TGG | 0.331291 | 6_4:+31969219 | Msa0985440:three_prime_UTR |
| ATGGAACAGACCAATCAATA+TGG | 0.335818 | 6_4:+31965390 | Msa0985440:CDS |
| GTGCCATTTGGCTGCGGCTT+TGG | 0.336018 | 6_4:+31967232 | Msa0985440:three_prime_UTR |
| TCTTTAATAGCACCAGAAAA+AGG | 0.340554 | 6_4:-31965470 | None:intergenic |
| TTTGTAGTACCACCCATTCT+TGG | 0.341492 | 6_4:-31969958 | None:intergenic |
| ACAAAGTTGTTCTATTTGAT+TGG | 0.344498 | 6_4:+31965447 | Msa0985440:CDS |
| AACATGTTTGGTTTGGTGTT+TGG | 0.345702 | 6_4:-31965284 | None:intergenic |
| CTTTGCAGCCCTGTTGCACT+TGG | 0.348506 | 6_4:-31969988 | None:intergenic |
| ATCTGGGCTTTCGAAATCTT+TGG | 0.349241 | 6_4:-31971036 | None:intergenic |
| CTTAAAGTTGTTAACTTTGT+TGG | 0.349814 | 6_4:+31965575 | Msa0985440:CDS |
| TTTGTTGGTCATTCCATGTC+TGG | 0.352708 | 6_4:+31965590 | Msa0985440:CDS |
| CTGAACCAGGGAGCGACATC+TGG | 0.352942 | 6_4:+31967114 | Msa0985440:CDS |
| CTGAACCAGGGAGCGACATC+TGG | 0.352942 | 6_4:+31967197 | Msa0985440:three_prime_UTR |
| GAGAGTGAATGAAGTGTGTT+TGG | 0.354966 | 6_4:-31967472 | None:intergenic |
| CAGCCAAGACCATCTGTTAT+AGG | 0.358169 | 6_4:+31970948 | Msa0985440:intron |
| AAGCAAAACGTCACTTCCTT+GGG | 0.362646 | 6_4:+31967393 | Msa0985440:three_prime_UTR |
| ATATATCCAATTTACCTATC+AGG | 0.364811 | 6_4:-31968921 | None:intergenic |
| CTTTACTCTGCAAAACTTTG+AGG | 0.367141 | 6_4:+31968735 | Msa0985440:three_prime_UTR |
| AAGCATGCACCAAGTGCAAC+AGG | 0.376208 | 6_4:+31969979 | Msa0985440:three_prime_UTR |
| TTATGCTGTTCTAACATGTT+TGG | 0.379798 | 6_4:-31965296 | None:intergenic |
| CTGCGTGAGTGTGTGCCATT+TGG | 0.386930 | 6_4:+31967137 | Msa0985440:CDS |
| CTGCGTGAGTGTGTGCCATT+TGG | 0.386930 | 6_4:+31967220 | Msa0985440:three_prime_UTR |
| TTTGGAATATCCCGTTCATC+TGG | 0.388870 | 6_4:+31970393 | Msa0985440:three_prime_UTR |
| AATTAAGGAGGATGAAGGTT+TGG | 0.389983 | 6_4:+31970489 | Msa0985440:three_prime_UTR |
| ATCAAAGTCCTTAAAGTTGA+AGG | 0.391632 | 6_4:-31968866 | None:intergenic |
| TCCCGTTCATCTGGACCAAT+TGG | 0.392737 | 6_4:+31970402 | Msa0985440:three_prime_UTR |
| TCCAATTGGTCCAGATGAAC+GGG | 0.394487 | 6_4:-31970403 | None:intergenic |
| GGCTGGTGTCACAAATCCTT+TGG | 0.397250 | 6_4:+31970375 | Msa0985440:intron |
| CATTCCATGTCTGGTATGAT+TGG | 0.407416 | 6_4:+31965599 | Msa0985440:CDS |
| CTTCACAACAAAAGCAGTTC+CGG | 0.409580 | 6_4:+31967500 | Msa0985440:three_prime_UTR |
| TCATCTATTGAAAGGTTCAT+TGG | 0.409872 | 6_4:+31969684 | Msa0985440:three_prime_UTR |
| TTAAAGTTGAAGGATGGTTT+GGG | 0.410608 | 6_4:-31968856 | None:intergenic |
| TGCTGACTCTGTGAGAATGC+TGG | 0.412575 | 6_4:-31969606 | None:intergenic |
| AAAGCAAAACGTCACTTCCT+TGG | 0.412755 | 6_4:+31967392 | Msa0985440:three_prime_UTR |
| GATCAGTTTATTGGATCAAA+TGG | 0.413857 | 6_4:+31965550 | Msa0985440:CDS |
| AGACCAATGCTATCAATCTA+AGG | 0.416378 | 6_4:+31970048 | Msa0985440:three_prime_UTR |
| TCAAAATTAACTTATAAAGA+AGG | 0.418893 | 6_4:-31971354 | None:intergenic |
| TTTACCAACAAAGCTGAGTC+TGG | 0.426621 | 6_4:+31969244 | Msa0985440:three_prime_UTR |
| ACTTTCTCTTTGGAAGGTAA+TGG | 0.428258 | 6_4:-31967305 | None:intergenic |
| CTGTTCTAACATGTTTGGTT+TGG | 0.431637 | 6_4:-31965291 | None:intergenic |
| AAGTTAAGTGGCAGCCAACT+TGG | 0.439945 | 6_4:+31970446 | Msa0985440:three_prime_UTR |
| CCTTTAAGCATTCTTCATCC+TGG | 0.440006 | 6_4:+31967642 | Msa0985440:three_prime_UTR |
| TGGTCCAGACTCAGCTTTGT+TGG | 0.441490 | 6_4:-31969248 | None:intergenic |
| AATTTGTTTGTAAAGTTAAG+TGG | 0.443383 | 6_4:+31970434 | Msa0985440:three_prime_UTR |
| TCTAAAGAAGAATACTTTGA+AGG | 0.446152 | 6_4:-31965509 | None:intergenic |
| GAACAAACAACATATTGAAA+TGG | 0.446405 | 6_4:+31968507 | Msa0985440:three_prime_UTR |
| AACTGATCTTTGAATTCAGC+TGG | 0.448268 | 6_4:-31968685 | None:intergenic |
| CTTCTGAATGCTAGAATCCT+AGG | 0.449257 | 6_4:+31965332 | Msa0985440:CDS |
| CTCAGACTCAACAAGGATCT+AGG | 0.450672 | 6_4:+31969049 | Msa0985440:three_prime_UTR |
| CAAGTGCAACAGGGCTGCAA+AGG | 0.456466 | 6_4:+31969989 | Msa0985440:three_prime_UTR |
| AATGCTAGAATCCTAGGAAC+AGG | 0.457236 | 6_4:+31965338 | Msa0985440:CDS |
| TCTTTAAGCATTCTTCATCC+TGG | 0.459756 | 6_4:+31967867 | Msa0985440:three_prime_UTR |
| TAGTTTCTGTTCCTGTTCCT+AGG | 0.461589 | 6_4:-31965349 | None:intergenic |
| CGCAGCCAGATGTCGCTCCC+TGG | 0.465580 | 6_4:-31967119 | None:intergenic |
| CGCAGCCAGATGTCGCTCCC+TGG | 0.465580 | 6_4:-31967202 | None:intergenic |
| ATTATTAAGTTGTACATTGT+GGG | 0.466054 | 6_4:+31969195 | Msa0985440:three_prime_UTR |
| CAAGTGAAACCATCCAAGAA+TGG | 0.468491 | 6_4:+31969945 | Msa0985440:three_prime_UTR |
| GAATTCAAAGATCAGTTTAA+GGG | 0.472155 | 6_4:+31968691 | Msa0985440:three_prime_UTR |
| CAAGCAATTAAGGAGGATGA+AGG | 0.472722 | 6_4:+31970484 | Msa0985440:three_prime_UTR |
| TTAAAACCCAACTGGACACT+TGG | 0.479992 | 6_4:-31967282 | None:intergenic |
| AATTTACCTATCAGGACATC+TGG | 0.480058 | 6_4:-31968913 | None:intergenic |
| CAACCAAAGCCGCAGCCAAA+TGG | 0.483619 | 6_4:-31967235 | None:intergenic |
| TGCCTGGTGTGATCGAAGAT+TGG | 0.483649 | 6_4:-31970989 | None:intergenic |
| AGATCAAGAAGGGAGGAGTA+AGG | 0.486508 | 6_4:+31968890 | Msa0985440:three_prime_UTR |
| GGTAATGGTTAAAACCCAAC+TGG | 0.488578 | 6_4:-31967290 | None:intergenic |
| TGTTTGAATTCAAGGACCTC+GGG | 0.489603 | 6_4:-31969467 | None:intergenic |
| AACAATCTTCAACTAAGATC+AGG | 0.492164 | 6_4:+31971072 | Msa0985440:three_prime_UTR |
| TTCCAATTGGTCCAGATGAA+CGG | 0.492510 | 6_4:-31970404 | None:intergenic |
| TCCAAATGCAACAATGTTTG+AGG | 0.493017 | 6_4:-31971255 | None:intergenic |
| TAAGAGAAGCCGCAGCCAAA+TGG | 0.493679 | 6_4:-31967152 | None:intergenic |
| CATTATTAAGTTGTACATTG+TGG | 0.494840 | 6_4:+31969194 | Msa0985440:three_prime_UTR |
| TGTACATTGTGGGAAGACTT+TGG | 0.499182 | 6_4:+31969205 | Msa0985440:three_prime_UTR |
| GAAGTGGAGGTCGAATATAA+TGG | 0.504803 | 6_4:+31970170 | Msa0985440:three_prime_UTR |
| AAGGGAGTGCACGCTGAACC+AGG | 0.505659 | 6_4:+31967101 | Msa0985440:intron |
| AAGGGAGTGCACGCTGAACC+AGG | 0.505659 | 6_4:+31967184 | Msa0985440:three_prime_UTR |
| GTATAGAAAAGTATGAGCTC+GGG | 0.505752 | 6_4:+31969396 | Msa0985440:intron |
| TTCTTGTTGGTGCTTCCCCA+AGG | 0.507570 | 6_4:+31965666 | Msa0985440:CDS |
| GTACCTTAGATTGATAGCAT+TGG | 0.507760 | 6_4:-31970051 | None:intergenic |
| AAGTGAAACCATCCAAGAAT+GGG | 0.511496 | 6_4:+31969946 | Msa0985440:three_prime_UTR |
| CTAAAGAAGAATACTTTGAA+GGG | 0.515212 | 6_4:-31965508 | None:intergenic |
| AACCACACTTTCTCTTTGGA+AGG | 0.516936 | 6_4:-31967311 | None:intergenic |
| TAGTACCACCCATTCTTGGA+TGG | 0.517749 | 6_4:-31969954 | None:intergenic |
| GTAAGGCCAGATGTCCTGAT+AGG | 0.519682 | 6_4:+31968907 | Msa0985440:three_prime_UTR |
| GCGTCATACTTGACGAAGAA+GGG | 0.521855 | 6_4:-31969656 | None:intergenic |
| ATGTGTTTGATAGATGTCAT+TGG | 0.523543 | 6_4:+31969003 | Msa0985440:intron |
| GCTGACTCTGTGAGAATGCT+GGG | 0.524606 | 6_4:-31969605 | None:intergenic |
| GAGTGTGTGCCATTTGGCTG+CGG | 0.525222 | 6_4:+31967143 | Msa0985440:CDS |
| GAGTGTGTGCCATTTGGCTG+CGG | 0.525222 | 6_4:+31967226 | Msa0985440:three_prime_UTR |
| CAGCTTTGTTGGTAAAGTCC+AGG | 0.525876 | 6_4:-31969237 | None:intergenic |
| TGTATAGAAAAGTATGAGCT+CGG | 0.527697 | 6_4:+31969395 | Msa0985440:intron |
| TGGAACAGACCAATCAATAT+GGG | 0.528463 | 6_4:+31965391 | Msa0985440:CDS |
| TATATGCCAAGTGTCCAGTT+GGG | 0.531498 | 6_4:+31967276 | Msa0985440:three_prime_UTR |
| GTGAATGAAGTGTGTTTGGA+AGG | 0.531722 | 6_4:-31967468 | None:intergenic |
| GGGTTGTACTTCTGCAGAGA+AGG | 0.533728 | 6_4:+31967422 | Msa0985440:three_prime_UTR |
| TTTAGGTTGGTGTTTAATGG+TGG | 0.534153 | 6_4:+31968799 | Msa0985440:three_prime_UTR |
| CGTGAGTGCAATGAATTGCT+TGG | 0.534280 | 6_4:+31970221 | Msa0985440:three_prime_UTR |
| TGACCTATAACAGATGGTCT+TGG | 0.536393 | 6_4:-31970951 | None:intergenic |
| GCTTCTCTTATAATATAAGA+AGG | 0.536718 | 6_4:+31967165 | Msa0985440:exon |
| TTGTTTGAATTCAAGGACCT+CGG | 0.536801 | 6_4:-31969468 | None:intergenic |
| CGCAATACTCATCTATTGAA+AGG | 0.537587 | 6_4:+31969676 | Msa0985440:three_prime_UTR |
| ACAGAGATTTGGAATCATTG+AGG | 0.544264 | 6_4:-31968435 | None:intergenic |
| GTGTCGTGAAGAGGGAAAGG+AGG | 0.548120 | 6_4:+31967334 | Msa0985440:three_prime_UTR |
| TGCGGCTTTGGTTGACAAGT+GGG | 0.548457 | 6_4:+31967244 | Msa0985440:three_prime_UTR |
| TTGATATGATAAATAAGCAT+AGG | 0.549013 | 6_4:-31971331 | None:intergenic |
| AGCTCGGGGTCTCTAATGCA+TGG | 0.550559 | 6_4:+31969411 | Msa0985440:three_prime_UTR |
| AACTGATCATCCATTTAGGT+TGG | 0.550785 | 6_4:+31968786 | Msa0985440:three_prime_UTR |
| GACTTTGATGAGATCAAGAA+GGG | 0.555153 | 6_4:+31968880 | Msa0985440:three_prime_UTR |
| GTTTAGTTGAGCACGTATCT+GGG | 0.556222 | 6_4:-31971052 | None:intergenic |
| AAGTCCTTAAAGTTGAAGGA+TGG | 0.558791 | 6_4:-31968862 | None:intergenic |
| ATCTAATTAATAGCTGTATG+TGG | 0.560535 | 6_4:+31971178 | Msa0985440:three_prime_UTR |
| GGACTTTGATGAGATCAAGA+AGG | 0.561370 | 6_4:+31968879 | Msa0985440:three_prime_UTR |
| TGCGTCATACTTGACGAAGA+AGG | 0.561591 | 6_4:-31969657 | None:intergenic |
| GTGTGGTTGTGTCGTGAAGA+GGG | 0.561601 | 6_4:+31967326 | Msa0985440:three_prime_UTR |
| ATGCAGGTTTAAGTTAGAAG+TGG | 0.566416 | 6_4:+31970154 | Msa0985440:intron |
| AGTTAAGTGGCAGCCAACTT+GGG | 0.566681 | 6_4:+31970447 | Msa0985440:three_prime_UTR |
| CTACTGCTGCTGAACTTCAG+AGG | 0.567427 | 6_4:+31970246 | Msa0985440:three_prime_UTR |
| AAGTGCAACAGGGCTGCAAA+GGG | 0.567909 | 6_4:+31969990 | Msa0985440:three_prime_UTR |
| TTATATGCCAAGTGTCCAGT+TGG | 0.570531 | 6_4:+31967275 | Msa0985440:three_prime_UTR |
| TGGAATCATCTTAACTATGG+TGG | 0.571879 | 6_4:+31971274 | Msa0985440:three_prime_UTR |
| CTGCGGCTTTGGTTGACAAG+TGG | 0.576977 | 6_4:+31967243 | Msa0985440:three_prime_UTR |
| TACCTTCCAAAGAGAAAGTG+TGG | 0.580105 | 6_4:+31967309 | Msa0985440:three_prime_UTR |
| CTGTTCGAGTTGTTGACATG+TGG | 0.581675 | 6_4:+31968467 | Msa0985440:three_prime_UTR |
| TGCCAATCTTCGATCACACC+AGG | 0.583430 | 6_4:+31970987 | Msa0985440:three_prime_UTR |
| TGTCGTGAAGAGGGAAAGGA+GGG | 0.585577 | 6_4:+31967335 | Msa0985440:three_prime_UTR |
| GCTAAGATTAAGGAAGCCAC+AGG | 0.587781 | 6_4:+31969292 | Msa0985440:three_prime_UTR |
| CAGGTTTAAGTTAGAAGTGG+AGG | 0.590528 | 6_4:+31970157 | Msa0985440:intron |
| GGGCTTTCGAAATCTTTGGT+AGG | 0.593351 | 6_4:-31971032 | None:intergenic |
| ACAACCAATCATACCAGACA+TGG | 0.594195 | 6_4:-31965603 | None:intergenic |
| AATAAACAGGAACAATGGCT+AGG | 0.600493 | 6_4:+31968392 | Msa0985440:intron |
| CTTCTCTTATAATATAAGAA+GGG | 0.600909 | 6_4:+31967166 | Msa0985440:exon |
| ATAAGCCTCTTGAAAAGATG+AGG | 0.601065 | 6_4:-31965644 | None:intergenic |
| TCATTGTGACCTATAACAGA+TGG | 0.602061 | 6_4:-31970957 | None:intergenic |
| TACTGCTGCTGAACTTCAGA+GGG | 0.602303 | 6_4:+31970247 | Msa0985440:three_prime_UTR |
| AGCAAAACGTCACTTCCTTG+GGG | 0.607479 | 6_4:+31967394 | Msa0985440:three_prime_UTR |
| ACAGAACAGCTGTCCCAAGT+TGG | 0.608831 | 6_4:-31970460 | None:intergenic |
| ACAATAATAAACAGGAACAA+TGG | 0.609334 | 6_4:+31968387 | Msa0985440:intron |
| GTTGTGTCGTGAAGAGGGAA+AGG | 0.614663 | 6_4:+31967331 | Msa0985440:three_prime_UTR |
| AGTGTGGTTGTGTCGTGAAG+AGG | 0.618784 | 6_4:+31967325 | Msa0985440:three_prime_UTR |
| AGGGAGTGCACGCTGAACCA+GGG | 0.619681 | 6_4:+31967102 | Msa0985440:intron |
| AGGGAGTGCACGCTGAACCA+GGG | 0.619681 | 6_4:+31967185 | Msa0985440:three_prime_UTR |
| AGATCAGGAGAAATATCAAG+AGG | 0.620362 | 6_4:+31971087 | Msa0985440:three_prime_UTR |
| CACACCAGGCAAAAGAGTTG+CGG | 0.627973 | 6_4:+31971001 | Msa0985440:three_prime_UTR |
| GAGGTCCTTGAATTCAAACA+AGG | 0.633092 | 6_4:+31969470 | Msa0985440:three_prime_UTR |
| AGTTGCATAATCTCTTTCAG+TGG | 0.633265 | 6_4:-31969723 | None:intergenic |
| GAAAGAGATTATGCAACTCA+CGG | 0.634322 | 6_4:+31969728 | Msa0985440:three_prime_UTR |
| TTCTGTTCAAGCAATTAAGG+AGG | 0.635888 | 6_4:+31970477 | Msa0985440:three_prime_UTR |
| TTGTGAATAAGAATGATAGT+TGG | 0.637160 | 6_4:-31969268 | None:intergenic |
| GAGAATGCTGGGTCATCAAG+AGG | 0.639664 | 6_4:-31969594 | None:intergenic |
| AGATGAACGGGATATTCCAA+AGG | 0.652617 | 6_4:-31970391 | None:intergenic |
| TCAATGATTCCAAATCTCTG+TGG | 0.654101 | 6_4:+31968437 | Msa0985440:three_prime_UTR |
| GGATACACTCAGACTCAACA+AGG | 0.656605 | 6_4:+31969042 | Msa0985440:three_prime_UTR |
| TGTCTGAAGTTGAGAAAGAG+TGG | 0.658247 | 6_4:-31970814 | None:intergenic |
| TATAGAAAAGTATGAGCTCG+GGG | 0.659742 | 6_4:+31969397 | Msa0985440:intron |
| AATGGTGTTGTGTGACAAAG+AGG | 0.660601 | 6_4:+31968525 | Msa0985440:three_prime_UTR |
| TGAAACCATCCAAGAATGGG+TGG | 0.661430 | 6_4:+31969949 | Msa0985440:three_prime_UTR |
| GATCAGGAGAAATATCAAGA+GGG | 0.663399 | 6_4:+31971088 | Msa0985440:three_prime_UTR |
| AGCATGCACCAAGTGCAACA+GGG | 0.675587 | 6_4:+31969980 | Msa0985440:three_prime_UTR |
| GCAAAACGTCACTTCCTTGG+GGG | 0.681125 | 6_4:+31967395 | Msa0985440:three_prime_UTR |
| TTTGATGAGATCAAGAAGGG+AGG | 0.688318 | 6_4:+31968883 | Msa0985440:three_prime_UTR |
| AGGTCCTTGAATTCAAACAA+GGG | 0.691512 | 6_4:+31969471 | Msa0985440:three_prime_UTR |
| ACTTCAGAGGGTCATGACTG+AGG | 0.692886 | 6_4:+31970259 | Msa0985440:three_prime_UTR |
| GTTTGAATTCAAGGACCTCG+GGG | 0.694669 | 6_4:-31969466 | None:intergenic |
| TTTCAATCCTGAATTCCCCG+AGG | 0.730893 | 6_4:+31969451 | Msa0985440:three_prime_UTR |
| TGAGAATGTTGAAAATGCAG+AGG | 0.731582 | 6_4:+31970656 | Msa0985440:three_prime_UTR |
| AGAGATTATGCAACTCACGG+AGG | 0.760690 | 6_4:+31969731 | Msa0985440:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTAAAAAAAAAATT+TGG | + | chr6_4:31965765-31965784 | Msa0985440:intron | 0.0% |
| !!! | TTTGACTTTATAAATTTTAT+GGG | - | chr6_4:31965868-31965887 | None:intergenic | 10.0% |
| !! | ATATATATATTAACAAGTAA+TGG | + | chr6_4:31965965-31965984 | Msa0985440:intron | 10.0% |
| !!! | CATAAAATAGTTTAAATTTT+AGG | + | chr6_4:31966352-31966371 | Msa0985440:intron | 10.0% |
| !! | TAGTAATTAATATTCTTATA+GGG | - | chr6_4:31966422-31966441 | None:intergenic | 10.0% |
| !! | ATAGTAATTAATATTCTTAT+AGG | - | chr6_4:31966423-31966442 | None:intergenic | 10.0% |
| !!! | AAAGTCATAAATTTTTTTTT+TGG | + | chr6_4:31966775-31966794 | Msa0985440:intron | 10.0% |
| !! | AAAAAAAATCTTAATAGTAA+TGG | - | chr6_4:31967832-31967851 | None:intergenic | 10.0% |
| !!! | GTTTTTAAAAGTATTATTTT+CGG | + | chr6_4:31968034-31968053 | Msa0985440:intron | 10.0% |
| !! | AAATATTAAATATGTACTTT+AGG | - | chr6_4:31969104-31969123 | None:intergenic | 10.0% |
| !! | AATTAATATTTACTATATAG+TGG | + | chr6_4:31969495-31969514 | Msa0985440:intron | 10.0% |
| !! | TATATATATATATTGCATAT+AGG | + | chr6_4:31970354-31970373 | Msa0985440:intron | 10.0% |
| !! | AAAGATTAAATTATGATATT+TGG | + | chr6_4:31971116-31971135 | Msa0985440:three_prime_UTR | 10.0% |
| !!! | TAGTTTTTTTCAGTAAAATA+AGG | - | chr6_4:31965428-31965447 | None:intergenic | 15.0% |
| !! | AGTATATAAAAATATACCTT+GGG | - | chr6_4:31965685-31965704 | None:intergenic | 15.0% |
| !!! | GTTTGACTTTATAAATTTTA+TGG | - | chr6_4:31965869-31965888 | None:intergenic | 15.0% |
| !!! | ACATTTTTAATCAAATCAAA+TGG | - | chr6_4:31966033-31966052 | None:intergenic | 15.0% |
| !!! | AATTTAGAATTGAAATGAAA+TGG | + | chr6_4:31966291-31966310 | Msa0985440:intron | 15.0% |
| !!! | TCATAAATTTTTTTTTTGGA+AGG | + | chr6_4:31966779-31966798 | Msa0985440:intron | 15.0% |
| !! | AATTTAGATCTTCAAATTAT+AGG | + | chr6_4:31966814-31966833 | Msa0985440:intron | 15.0% |
| !! | TATCTCTTATAATATAAGAA+GGG | + | chr6_4:31967083-31967102 | Msa0985440:intron | 15.0% |
| !! | AAATGTATAAAATATATACC+AGG | - | chr6_4:31967663-31967682 | None:intergenic | 15.0% |
| !!! | AACTATTTTTTCAATAAGTA+TGG | + | chr6_4:31968612-31968631 | Msa0985440:intron | 15.0% |
| !! | CTAATTACAAATCTTTATAA+TGG | - | chr6_4:31970105-31970124 | None:intergenic | 15.0% |
| !!! | CAATGATTTTATTTTACATT+AGG | + | chr6_4:31970614-31970633 | Msa0985440:intron | 15.0% |
| !! | GTATATAAAAATATACCTTG+GGG | - | chr6_4:31965684-31965703 | None:intergenic | 20.0% |
| !! | GAGTATATAAAAATATACCT+TGG | - | chr6_4:31965686-31965705 | None:intergenic | 20.0% |
| !!! | ATGTGAGTTTTTAATTAACT+GGG | - | chr6_4:31965995-31966014 | None:intergenic | 20.0% |
| !!! | TATGTGAGTTTTTAATTAAC+TGG | - | chr6_4:31965996-31966015 | None:intergenic | 20.0% |
| !! | ACAATAACTTTACATTTCAA+AGG | - | chr6_4:31966069-31966088 | None:intergenic | 20.0% |
| !!! | ATGTAAAGTTATTGTTTTCT+AGG | + | chr6_4:31966074-31966093 | Msa0985440:intron | 20.0% |
| !! | AAATGACAAATGTTAAGAAA+GGG | - | chr6_4:31966211-31966230 | None:intergenic | 20.0% |
| !! | AAAATGACAAATGTTAAGAA+AGG | - | chr6_4:31966212-31966231 | None:intergenic | 20.0% |
| !!! | AACTATTTTATGATACTACA+AGG | - | chr6_4:31966344-31966363 | None:intergenic | 20.0% |
| !!! | TAGTTTAAATTTTAGGGAAT+TGG | + | chr6_4:31966359-31966378 | Msa0985440:intron | 20.0% |
| !! | AATTAATATTCTTATAGGGA+TGG | - | chr6_4:31966418-31966437 | None:intergenic | 20.0% |
| !! | TAATTACTATATAGATGTGA+TGG | + | chr6_4:31966433-31966452 | Msa0985440:intron | 20.0% |
| !! | TGAGATAAGGATATATAAAT+CGG | + | chr6_4:31966509-31966528 | Msa0985440:intron | 20.0% |
| !! | TAGTAAAAAGGAAAATACTT+TGG | - | chr6_4:31966729-31966748 | None:intergenic | 20.0% |
| !!! | CACTGAAATATTTTTTAGAA+AGG | + | chr6_4:31966913-31966932 | Msa0985440:intron | 20.0% |
| !! | GTATCTCTTATAATATAAGA+AGG | + | chr6_4:31967082-31967101 | Msa0985440:intron | 20.0% |
| !! | CTTCTCTTATAATATAAGAA+GGG | + | chr6_4:31967166-31967185 | Msa0985440:exon | 20.0% |
| !! | CAATGTATAAAATATATACC+AGG | - | chr6_4:31967888-31967907 | None:intergenic | 20.0% |
| !!! | AAATTTCAAGTAGAAAAAGA+AGG | - | chr6_4:31967925-31967944 | None:intergenic | 20.0% |
| !! | TGTTGAAAACAATAATAAAC+AGG | + | chr6_4:31968379-31968398 | Msa0985440:intron | 20.0% |
| !!! | ATTATTAAGTTGTACATTGT+GGG | + | chr6_4:31969195-31969214 | Msa0985440:three_prime_UTR | 20.0% |
| !! | AATGTGTTAATAACCTTTAT+AGG | + | chr6_4:31969568-31969587 | Msa0985440:intron | 20.0% |
| !! | TTAATTCATAGTTAATTCAC+AGG | + | chr6_4:31969770-31969789 | Msa0985440:intron | 20.0% |
| !! | TTAAAGTTCATTGTATATAC+AGG | - | chr6_4:31969839-31969858 | None:intergenic | 20.0% |
| !!! | AATTTGTTTGTAAAGTTAAG+TGG | + | chr6_4:31970434-31970453 | Msa0985440:three_prime_UTR | 20.0% |
| !!! | GTTAACAATTTTCATGAATT+AGG | + | chr6_4:31970584-31970603 | Msa0985440:intron | 20.0% |
| !!! | TGATTTTATTTTACATTAGG+AGG | + | chr6_4:31970617-31970636 | Msa0985440:intron | 20.0% |
| !! | AAATAATCCAACATTGTATA+TGG | - | chr6_4:31970753-31970772 | None:intergenic | 20.0% |
| !! | TTGATATGATAAATAAGCAT+AGG | - | chr6_4:31971334-31971353 | None:intergenic | 20.0% |
| ! | ACAAAGTTGTTCTATTTGAT+TGG | + | chr6_4:31965447-31965466 | Msa0985440:CDS | 25.0% |
| ! | CTAAAGAAGAATACTTTGAA+GGG | - | chr6_4:31965511-31965530 | None:intergenic | 25.0% |
| ! | TCTAAAGAAGAATACTTTGA+AGG | - | chr6_4:31965512-31965531 | None:intergenic | 25.0% |
| ! | CTTAAAGTTGTTAACTTTGT+TGG | + | chr6_4:31965575-31965594 | Msa0985440:CDS | 25.0% |
| ! | GTAATAGACTATATGAGATA+AGG | + | chr6_4:31966496-31966515 | Msa0985440:intron | 25.0% |
| ! | GAGATAAGGATATATAAATC+GGG | + | chr6_4:31966510-31966529 | Msa0985440:intron | 25.0% |
| ! | TATAAATCGGGATAATACTT+TGG | + | chr6_4:31966522-31966541 | Msa0985440:intron | 25.0% |
| ! | AAAAGGAAAATACTTTGGTT+GGG | - | chr6_4:31966724-31966743 | None:intergenic | 25.0% |
| ! | AAAAAGGAAAATACTTTGGT+TGG | - | chr6_4:31966725-31966744 | None:intergenic | 25.0% |
| ! | GAACTAGAGATTTAGTAAAA+AGG | - | chr6_4:31966741-31966760 | None:intergenic | 25.0% |
| ! | AAATCTTAAGAACAGATACT+TGG | - | chr6_4:31967029-31967048 | None:intergenic | 25.0% |
| !! | ATCTGTTCTTAAGATTTTAG+TGG | + | chr6_4:31967032-31967051 | Msa0985440:intron | 25.0% |
| ! | GCTTCTCTTATAATATAAGA+AGG | + | chr6_4:31967165-31967184 | Msa0985440:exon | 25.0% |
| !!! | TCTTGATGAAGATTTTGAAA+AGG | + | chr6_4:31967361-31967380 | Msa0985440:three_prime_UTR | 25.0% |
| ! | CGAAAATGAAATGAGAAAAT+AGG | - | chr6_4:31967552-31967571 | None:intergenic | 25.0% |
| ! | GCAAAATGGAAGAAAAATAA+CGG | - | chr6_4:31967617-31967636 | None:intergenic | 25.0% |
| !!! | TTATTTTTCTTCCATTTTGC+AGG | + | chr6_4:31967617-31967636 | Msa0985440:intron | 25.0% |
| !!! | GGAAAATAACATGTTATTTC+AGG | - | chr6_4:31967811-31967830 | None:intergenic | 25.0% |
| !!! | GATTTTTTTTTTCACTTTGC+AGG | + | chr6_4:31967842-31967861 | Msa0985440:intron | 25.0% |
| !!! | GAAGTATTGTTCTCAAAAAA+AGG | - | chr6_4:31967984-31968003 | None:intergenic | 25.0% |
| !!! | GCATTTATCATTTTTAAGTG+AGG | + | chr6_4:31968101-31968120 | Msa0985440:intron | 25.0% |
| ! | GTTTATATTACACAACGATT+TGG | + | chr6_4:31968142-31968161 | Msa0985440:intron | 25.0% |
| ! | ATCTCTTAAAATGATATAGC+AGG | - | chr6_4:31968323-31968342 | None:intergenic | 25.0% |
| ! | ACAATAATAAACAGGAACAA+TGG | + | chr6_4:31968387-31968406 | Msa0985440:intron | 25.0% |
| ! | GAACAAACAACATATTGAAA+TGG | + | chr6_4:31968507-31968526 | Msa0985440:three_prime_UTR | 25.0% |
| ! | TGAATTCAAAGATCAGTTTA+AGG | + | chr6_4:31968690-31968709 | Msa0985440:three_prime_UTR | 25.0% |
| ! | GAATTCAAAGATCAGTTTAA+GGG | + | chr6_4:31968691-31968710 | Msa0985440:three_prime_UTR | 25.0% |
| ! | ATATATCCAATTTACCTATC+AGG | - | chr6_4:31968924-31968943 | None:intergenic | 25.0% |
| ! | TAAGTGTATAAAAACTGCAA+AGG | - | chr6_4:31968951-31968970 | None:intergenic | 25.0% |
| ! | GGAAAATACAAATAAACTTC+TGG | + | chr6_4:31969070-31969089 | Msa0985440:three_prime_UTR | 25.0% |
| !! | CATTATTAAGTTGTACATTG+TGG | + | chr6_4:31969194-31969213 | Msa0985440:three_prime_UTR | 25.0% |
| ! | TTGTGAATAAGAATGATAGT+TGG | - | chr6_4:31969271-31969290 | None:intergenic | 25.0% |
| ! | TATTCACAATGCTAAGATTA+AGG | + | chr6_4:31969282-31969301 | Msa0985440:three_prime_UTR | 25.0% |
| ! | ACTTCATTATTAATAACCTG+TGG | - | chr6_4:31969311-31969330 | None:intergenic | 25.0% |
| !! | TTGCAACTAAGTTTTTCTTA+TGG | + | chr6_4:31970195-31970214 | Msa0985440:three_prime_UTR | 25.0% |
| !! | TGCAACTAAGTTTTTCTTAT+GGG | + | chr6_4:31970196-31970215 | Msa0985440:three_prime_UTR | 25.0% |
| ! | CAGTATTTAATCACTCTTTA+AGG | - | chr6_4:31970305-31970324 | None:intergenic | 25.0% |
| ! | TATATATATTGCATATAGGC+TGG | + | chr6_4:31970358-31970377 | Msa0985440:intron | 25.0% |
| ! | CAATGAATGACAAAACAAAA+AGG | - | chr6_4:31970901-31970920 | None:intergenic | 25.0% |
| ! | ATCTAATTAATAGCTGTATG+TGG | + | chr6_4:31971178-31971197 | Msa0985440:three_prime_UTR | 25.0% |
| !! | ATTTGGAATCATCTTAACTA+TGG | + | chr6_4:31971271-31971290 | Msa0985440:three_prime_UTR | 25.0% |
| TTATGCTGTTCTAACATGTT+TGG | - | chr6_4:31965299-31965318 | None:intergenic | 30.0% | |
| ! | GAAACTATAGTTTTTGCTCA+TGG | + | chr6_4:31965365-31965384 | Msa0985440:CDS | 30.0% |
| ! | ATAGTTTTTGCTCATGGTTA+TGG | + | chr6_4:31965371-31965390 | Msa0985440:CDS | 30.0% |
| ! | TGATTTTGTCCCATATTGAT+TGG | - | chr6_4:31965403-31965422 | None:intergenic | 30.0% |
| TCTTTAATAGCACCAGAAAA+AGG | - | chr6_4:31965473-31965492 | None:intergenic | 30.0% | |
| AGATGACTTGATCAGTTTAT+TGG | + | chr6_4:31965541-31965560 | Msa0985440:CDS | 30.0% | |
| GATCAGTTTATTGGATCAAA+TGG | + | chr6_4:31965550-31965569 | Msa0985440:CDS | 30.0% | |
| ! | GAAAAGATGAGGTCTTTTAA+TGG | - | chr6_4:31965636-31965655 | None:intergenic | 30.0% |
| CAAACAAAGAACATAGTTAC+AGG | - | chr6_4:31965914-31965933 | None:intergenic | 30.0% | |
| GAGAACAACAAAGGAAAAAA+AGG | - | chr6_4:31966170-31966189 | None:intergenic | 30.0% | |
| CTCATATAGTCTATTACAAG+TGG | - | chr6_4:31966493-31966512 | None:intergenic | 30.0% | |
| AAAGGAAAATACTTTGGTTG+GGG | - | chr6_4:31966723-31966742 | None:intergenic | 30.0% | |
| !! | TGAAGATTTTGAAAAGGCTT+TGG | + | chr6_4:31967367-31967386 | Msa0985440:three_prime_UTR | 30.0% |
| GAACTGATGTTCTCAAAAAA+AGG | - | chr6_4:31967759-31967778 | None:intergenic | 30.0% | |
| AGAACAATACTTCCATAGAT+CGG | + | chr6_4:31967991-31968010 | Msa0985440:intron | 30.0% | |
| !! | GATTTGGTGTTATCAAAGTA+CGG | + | chr6_4:31968158-31968177 | Msa0985440:intron | 30.0% |
| CATTATGTAGCTACAAAGTT+TGG | + | chr6_4:31968264-31968283 | Msa0985440:intron | 30.0% | |
| ! | TTTTACATCACTAAGCTATG+TGG | + | chr6_4:31968552-31968571 | Msa0985440:intron | 30.0% |
| ATTCACTTCTAATGTTCATC+AGG | + | chr6_4:31968639-31968658 | Msa0985440:intron | 30.0% | |
| TTCACTTCTAATGTTCATCA+GGG | + | chr6_4:31968640-31968659 | Msa0985440:intron | 30.0% | |
| TTAAAGTTGAAGGATGGTTT+GGG | - | chr6_4:31968859-31968878 | None:intergenic | 30.0% | |
| ATCAAAGTCCTTAAAGTTGA+AGG | - | chr6_4:31968869-31968888 | None:intergenic | 30.0% | |
| ATGTGTTTGATAGATGTCAT+TGG | + | chr6_4:31969003-31969022 | Msa0985440:intron | 30.0% | |
| ATTGGAGTCTTTCATGAATT+AGG | + | chr6_4:31969021-31969040 | Msa0985440:three_prime_UTR | 30.0% | |
| ! | TGTATAGAAAAGTATGAGCT+CGG | + | chr6_4:31969395-31969414 | Msa0985440:intron | 30.0% |
| TTCAGGATTGAAAAAAAGCT+TGG | - | chr6_4:31969444-31969463 | None:intergenic | 30.0% | |
| ! | ATTACCCTTGTTTGAATTCA+AGG | - | chr6_4:31969478-31969497 | None:intergenic | 30.0% |
| AAGTACTTTGCTGAATCAAT+TGG | - | chr6_4:31969525-31969544 | None:intergenic | 30.0% | |
| TCATCTATTGAAAGGTTCAT+TGG | + | chr6_4:31969684-31969703 | Msa0985440:three_prime_UTR | 30.0% | |
| TAAGTTAGAACTGAAGTTGT+TGG | + | chr6_4:31969862-31969881 | Msa0985440:intron | 30.0% | |
| AAGTTAGAACTGAAGTTGTT+GGG | + | chr6_4:31969863-31969882 | Msa0985440:intron | 30.0% | |
| GTACAAAAGAGTAATGTAGT+AGG | + | chr6_4:31970070-31970089 | Msa0985440:intron | 30.0% | |
| ! | GTTATTGGATTTTCTTATGC+AGG | + | chr6_4:31970138-31970157 | Msa0985440:intron | 30.0% |
| !! | AATCACTCTTTAAGGTTCAA+AGG | - | chr6_4:31970297-31970316 | None:intergenic | 30.0% |
| ! | CAAATTCTCTGTTTTCCAAT+TGG | - | chr6_4:31970420-31970439 | None:intergenic | 30.0% |
| AACAATCTTCAACTAAGATC+AGG | + | chr6_4:31971072-31971091 | Msa0985440:three_prime_UTR | 30.0% | |
| !! | AACATGTTTGGTTTGGTGTT+TGG | - | chr6_4:31965287-31965306 | None:intergenic | 35.0% |
| CTGTTCTAACATGTTTGGTT+TGG | - | chr6_4:31965294-31965313 | None:intergenic | 35.0% | |
| ATGGAACAGACCAATCAATA+TGG | + | chr6_4:31965390-31965409 | Msa0985440:CDS | 35.0% | |
| TGGAACAGACCAATCAATAT+GGG | + | chr6_4:31965391-31965410 | Msa0985440:CDS | 35.0% | |
| !!! | CTATTTGATTGGCCTTTTTC+TGG | + | chr6_4:31965458-31965477 | Msa0985440:CDS | 35.0% |
| !! | AAAGACCTCATCTTTTCAAG+AGG | + | chr6_4:31965639-31965658 | Msa0985440:CDS | 35.0% |
| ATAAGCCTCTTGAAAAGATG+AGG | - | chr6_4:31965647-31965666 | None:intergenic | 35.0% | |
| TTCAAGAGGCTTATTCTTGT+TGG | + | chr6_4:31965653-31965672 | Msa0985440:CDS | 35.0% | |
| CATTTCAAAGGAGAAAGAAG+AGG | - | chr6_4:31966057-31966076 | None:intergenic | 35.0% | |
| ATGTTAGAGGAGAACAACAA+AGG | - | chr6_4:31966179-31966198 | None:intergenic | 35.0% | |
| AGGGAATATATGCATGTTAG+AGG | - | chr6_4:31966192-31966211 | None:intergenic | 35.0% | |
| TGTTACCGTGACATTAAATC+TGG | + | chr6_4:31966553-31966572 | Msa0985440:intron | 35.0% | |
| GTTACCGTGACATTAAATCT+GGG | + | chr6_4:31966554-31966573 | Msa0985440:intron | 35.0% | |
| TGTATGGGTGACATTAAATC+TGG | + | chr6_4:31966613-31966632 | Msa0985440:intron | 35.0% | |
| GTATGGGTGACATTAAATCT+GGG | + | chr6_4:31966614-31966633 | Msa0985440:intron | 35.0% | |
| GTGACTCAGATTTAATGTCA+TGG | + | chr6_4:31966658-31966677 | Msa0985440:intron | 35.0% | |
| TGGTTGGGGTATGATTTATA+GGG | - | chr6_4:31966709-31966728 | None:intergenic | 35.0% | |
| TTGGTTGGGGTATGATTTAT+AGG | - | chr6_4:31966710-31966729 | None:intergenic | 35.0% | |
| ! | ACTTTCTCTTTGGAAGGTAA+TGG | - | chr6_4:31967308-31967327 | None:intergenic | 35.0% |
| AGAACATCAGTTCCTTAGAT+CGG | + | chr6_4:31967766-31967785 | Msa0985440:intron | 35.0% | |
| ! | TTCAGGTTAGAACATTTGCA+TGG | - | chr6_4:31967794-31967813 | None:intergenic | 35.0% |
| TCTTTAAGCATTCTTCATCC+TGG | + | chr6_4:31967867-31967886 | Msa0985440:three_prime_UTR | 35.0% | |
| ! | AAAACTGATTTCATCCAAGC+AGG | - | chr6_4:31968019-31968038 | None:intergenic | 35.0% |
| AATAAACAGGAACAATGGCT+AGG | + | chr6_4:31968392-31968411 | Msa0985440:intron | 35.0% | |
| !! | AGGTTCTTGATCTTTTGGAA+AGG | - | chr6_4:31968418-31968437 | None:intergenic | 35.0% |
| ! | CATTGAGGTTCTTGATCTTT+TGG | - | chr6_4:31968423-31968442 | None:intergenic | 35.0% |
| ! | ACAGAGATTTGGAATCATTG+AGG | - | chr6_4:31968438-31968457 | None:intergenic | 35.0% |
| TCAATGATTCCAAATCTCTG+TGG | + | chr6_4:31968437-31968456 | Msa0985440:three_prime_UTR | 35.0% | |
| ! | AGCAATTTTCCACAGAGATT+TGG | - | chr6_4:31968449-31968468 | None:intergenic | 35.0% |
| AACTGATCTTTGAATTCAGC+TGG | - | chr6_4:31968688-31968707 | None:intergenic | 35.0% | |
| ! | CTCAAAGTTTTGCAGAGTAA+AGG | - | chr6_4:31968737-31968756 | None:intergenic | 35.0% |
| CTTTACTCTGCAAAACTTTG+AGG | + | chr6_4:31968735-31968754 | Msa0985440:three_prime_UTR | 35.0% | |
| AAGCAACTGATCATCCATTT+AGG | + | chr6_4:31968782-31968801 | Msa0985440:three_prime_UTR | 35.0% | |
| AACTGATCATCCATTTAGGT+TGG | + | chr6_4:31968786-31968805 | Msa0985440:three_prime_UTR | 35.0% | |
| CCATTAAACACCAACCTAAA+TGG | - | chr6_4:31968799-31968818 | None:intergenic | 35.0% | |
| !! | CCATTTAGGTTGGTGTTTAA+TGG | + | chr6_4:31968796-31968815 | Msa0985440:three_prime_UTR | 35.0% |
| !! | TTTAGGTTGGTGTTTAATGG+TGG | + | chr6_4:31968799-31968818 | Msa0985440:three_prime_UTR | 35.0% |
| CTTAAAGTTGAAGGATGGTT+TGG | - | chr6_4:31968860-31968879 | None:intergenic | 35.0% | |
| CAAACCATCCTTCAACTTTA+AGG | + | chr6_4:31968858-31968877 | Msa0985440:three_prime_UTR | 35.0% | |
| AAGTCCTTAAAGTTGAAGGA+TGG | - | chr6_4:31968865-31968884 | None:intergenic | 35.0% | |
| GACTTTGATGAGATCAAGAA+GGG | + | chr6_4:31968880-31968899 | Msa0985440:three_prime_UTR | 35.0% | |
| AATTTACCTATCAGGACATC+TGG | - | chr6_4:31968916-31968935 | None:intergenic | 35.0% | |
| AGATGTCCTGATAGGTAAAT+TGG | + | chr6_4:31968915-31968934 | Msa0985440:intron | 35.0% | |
| TCCATATTGTTACTGTGTAC+AGG | + | chr6_4:31969167-31969186 | Msa0985440:intron | 35.0% | |
| CCATATTGTTACTGTGTACA+GGG | + | chr6_4:31969168-31969187 | Msa0985440:intron | 35.0% | |
| CATATTGTTACTGTGTACAG+GGG | + | chr6_4:31969169-31969188 | Msa0985440:intron | 35.0% | |
| ! | GTATAGAAAAGTATGAGCTC+GGG | + | chr6_4:31969396-31969415 | Msa0985440:intron | 35.0% |
| ! | TATAGAAAAGTATGAGCTCG+GGG | + | chr6_4:31969397-31969416 | Msa0985440:intron | 35.0% |
| TTGTTTGAATTCAAGGACCT+CGG | - | chr6_4:31969471-31969490 | None:intergenic | 35.0% | |
| AGGTCCTTGAATTCAAACAA+GGG | + | chr6_4:31969471-31969490 | Msa0985440:three_prime_UTR | 35.0% | |
| CGCAATACTCATCTATTGAA+AGG | + | chr6_4:31969676-31969695 | Msa0985440:three_prime_UTR | 35.0% | |
| AGTTGCATAATCTCTTTCAG+TGG | - | chr6_4:31969726-31969745 | None:intergenic | 35.0% | |
| GAAAGAGATTATGCAACTCA+CGG | + | chr6_4:31969728-31969747 | Msa0985440:three_prime_UTR | 35.0% | |
| AAGTGAAACCATCCAAGAAT+GGG | + | chr6_4:31969946-31969965 | Msa0985440:three_prime_UTR | 35.0% | |
| !!! | TGTTTTTGGTCACAAAACAG+TGG | - | chr6_4:31970026-31970045 | None:intergenic | 35.0% |
| !!! | TAGCATTGGTCTCATGTTTT+TGG | - | chr6_4:31970040-31970059 | None:intergenic | 35.0% |
| AGACCAATGCTATCAATCTA+AGG | + | chr6_4:31970048-31970067 | Msa0985440:three_prime_UTR | 35.0% | |
| ! | GTACCTTAGATTGATAGCAT+TGG | - | chr6_4:31970054-31970073 | None:intergenic | 35.0% |
| AGAGCTGCATATTCAGTTAT+TGG | + | chr6_4:31970123-31970142 | Msa0985440:intron | 35.0% | |
| ! | ATGCAGGTTTAAGTTAGAAG+TGG | + | chr6_4:31970154-31970173 | Msa0985440:intron | 35.0% |
| CTGTTCTGTTCAAGCAATTA+AGG | + | chr6_4:31970474-31970493 | Msa0985440:three_prime_UTR | 35.0% | |
| TTCTGTTCAAGCAATTAAGG+AGG | + | chr6_4:31970477-31970496 | Msa0985440:three_prime_UTR | 35.0% | |
| AATTAAGGAGGATGAAGGTT+TGG | + | chr6_4:31970489-31970508 | Msa0985440:three_prime_UTR | 35.0% | |
| !!! | AGAAGAGTACCTCAGTTTTT+GGG | - | chr6_4:31970537-31970556 | None:intergenic | 35.0% |
| !!! | TAGAAGAGTACCTCAGTTTT+TGG | - | chr6_4:31970538-31970557 | None:intergenic | 35.0% |
| ACATTAGGAGGATGATATTC+TGG | + | chr6_4:31970629-31970648 | Msa0985440:intron | 35.0% | |
| TGAGAATGTTGAAAATGCAG+AGG | + | chr6_4:31970656-31970675 | Msa0985440:three_prime_UTR | 35.0% | |
| ATGTTGAAAATGCAGAGGTA+TGG | + | chr6_4:31970661-31970680 | Msa0985440:intron | 35.0% | |
| AGGGAAACCATATACAATGT+TGG | + | chr6_4:31970743-31970762 | Msa0985440:intron | 35.0% | |
| AATTATCGCAACTCACAGTT+GGG | - | chr6_4:31970851-31970870 | None:intergenic | 35.0% | |
| TCATTGTGACCTATAACAGA+TGG | - | chr6_4:31970960-31970979 | None:intergenic | 35.0% | |
| AGATCAGGAGAAATATCAAG+AGG | + | chr6_4:31971087-31971106 | Msa0985440:three_prime_UTR | 35.0% | |
| GATCAGGAGAAATATCAAGA+GGG | + | chr6_4:31971088-31971107 | Msa0985440:three_prime_UTR | 35.0% | |
| ACCTCAAACATTGTTGCATT+TGG | + | chr6_4:31971254-31971273 | Msa0985440:three_prime_UTR | 35.0% | |
| TCCAAATGCAACAATGTTTG+AGG | - | chr6_4:31971258-31971277 | None:intergenic | 35.0% | |
| TGGAATCATCTTAACTATGG+TGG | + | chr6_4:31971274-31971293 | Msa0985440:three_prime_UTR | 35.0% | |
| CTTCTGAATGCTAGAATCCT+AGG | + | chr6_4:31965332-31965351 | Msa0985440:CDS | 40.0% | |
| AATGCTAGAATCCTAGGAAC+AGG | + | chr6_4:31965338-31965357 | Msa0985440:CDS | 40.0% | |
| TAGTTTCTGTTCCTGTTCCT+AGG | - | chr6_4:31965352-31965371 | None:intergenic | 40.0% | |
| TTTGTTGGTCATTCCATGTC+TGG | + | chr6_4:31965590-31965609 | Msa0985440:CDS | 40.0% | |
| CATTCCATGTCTGGTATGAT+TGG | + | chr6_4:31965599-31965618 | Msa0985440:CDS | 40.0% | |
| ACAACCAATCATACCAGACA+TGG | - | chr6_4:31965606-31965625 | None:intergenic | 40.0% | |
| TTCTTCCCAAAATACTGCCT+AGG | + | chr6_4:31966388-31966407 | Msa0985440:intron | 40.0% | |
| ! | GAAGTCCTAGGCAGTATTTT+GGG | - | chr6_4:31966396-31966415 | None:intergenic | 40.0% |
| TACAAGTGGCCTAGTTCATT+TGG | - | chr6_4:31966479-31966498 | None:intergenic | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr6_4:31966565-31966584 | Msa0985440:intron | 40.0% | |
| TTAAATCTGGGCCACACAAA+GGG | + | chr6_4:31966566-31966585 | Msa0985440:intron | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr6_4:31966565-31966584 | Msa0985440:intron | 40.0% | |
| GGTTGGGGTATGATTTATAG+GGG | - | chr6_4:31966708-31966727 | None:intergenic | 40.0% | |
| TTATATGCCAAGTGTCCAGT+TGG | + | chr6_4:31967275-31967294 | Msa0985440:three_prime_UTR | 40.0% | |
| TATATGCCAAGTGTCCAGTT+GGG | + | chr6_4:31967276-31967295 | Msa0985440:three_prime_UTR | 40.0% | |
| TTAAAACCCAACTGGACACT+TGG | - | chr6_4:31967285-31967304 | None:intergenic | 40.0% | |
| ! | GGTAATGGTTAAAACCCAAC+TGG | - | chr6_4:31967293-31967312 | None:intergenic | 40.0% |
| TACCTTCCAAAGAGAAAGTG+TGG | + | chr6_4:31967309-31967328 | Msa0985440:three_prime_UTR | 40.0% | |
| AACCACACTTTCTCTTTGGA+AGG | - | chr6_4:31967314-31967333 | None:intergenic | 40.0% | |
| ACACAACCACACTTTCTCTT+TGG | - | chr6_4:31967318-31967337 | None:intergenic | 40.0% | |
| AAAGCAAAACGTCACTTCCT+TGG | + | chr6_4:31967392-31967411 | Msa0985440:three_prime_UTR | 40.0% | |
| AAGCAAAACGTCACTTCCTT+GGG | + | chr6_4:31967393-31967412 | Msa0985440:three_prime_UTR | 40.0% | |
| GTGAATGAAGTGTGTTTGGA+AGG | - | chr6_4:31967471-31967490 | None:intergenic | 40.0% | |
| GAGAGTGAATGAAGTGTGTT+TGG | - | chr6_4:31967475-31967494 | None:intergenic | 40.0% | |
| CTTCACAACAAAAGCAGTTC+CGG | + | chr6_4:31967500-31967519 | Msa0985440:three_prime_UTR | 40.0% | |
| GCTTAAAGGAACCTGCAAAA+TGG | - | chr6_4:31967631-31967650 | None:intergenic | 40.0% | |
| CCAGGATGAAGAATGCTTAA+AGG | - | chr6_4:31967645-31967664 | None:intergenic | 40.0% | |
| CCTTTAAGCATTCTTCATCC+TGG | + | chr6_4:31967642-31967661 | Msa0985440:three_prime_UTR | 40.0% | |
| ATTTGCATGGAACCGATCTA+AGG | - | chr6_4:31967781-31967800 | None:intergenic | 40.0% | |
| !!! | AGTACGGCAGCTTTTAAGTT+TGG | + | chr6_4:31968174-31968193 | Msa0985440:intron | 40.0% |
| !! | AATGGTGTTGTGTGACAAAG+AGG | + | chr6_4:31968525-31968544 | Msa0985440:three_prime_UTR | 40.0% |
| GGACTTTGATGAGATCAAGA+AGG | + | chr6_4:31968879-31968898 | Msa0985440:three_prime_UTR | 40.0% | |
| TTTGATGAGATCAAGAAGGG+AGG | + | chr6_4:31968883-31968902 | Msa0985440:three_prime_UTR | 40.0% | |
| CCCTGTACACAGTAACAATA+TGG | - | chr6_4:31969171-31969190 | None:intergenic | 40.0% | |
| TGTACATTGTGGGAAGACTT+TGG | + | chr6_4:31969205-31969224 | Msa0985440:three_prime_UTR | 40.0% | |
| ! | AGACTTTGGTCTTCAATTCC+TGG | + | chr6_4:31969219-31969238 | Msa0985440:three_prime_UTR | 40.0% |
| TTTACCAACAAAGCTGAGTC+TGG | + | chr6_4:31969244-31969263 | Msa0985440:three_prime_UTR | 40.0% | |
| TGTTTGAATTCAAGGACCTC+GGG | - | chr6_4:31969470-31969489 | None:intergenic | 40.0% | |
| GAGGTCCTTGAATTCAAACA+AGG | + | chr6_4:31969470-31969489 | Msa0985440:three_prime_UTR | 40.0% | |
| CATCAAGAGGCAACCTATAA+AGG | - | chr6_4:31969584-31969603 | None:intergenic | 40.0% | |
| CAAGTGAAACCATCCAAGAA+TGG | + | chr6_4:31969945-31969964 | Msa0985440:three_prime_UTR | 40.0% | |
| TTTGTAGTACCACCCATTCT+TGG | - | chr6_4:31969961-31969980 | None:intergenic | 40.0% | |
| ! | CAGGTTTAAGTTAGAAGTGG+AGG | + | chr6_4:31970157-31970176 | Msa0985440:intron | 40.0% |
| GAAGTGGAGGTCGAATATAA+TGG | + | chr6_4:31970170-31970189 | Msa0985440:three_prime_UTR | 40.0% | |
| AGATGAACGGGATATTCCAA+AGG | - | chr6_4:31970394-31970413 | None:intergenic | 40.0% | |
| ! | TTTGGAATATCCCGTTCATC+TGG | + | chr6_4:31970393-31970412 | Msa0985440:three_prime_UTR | 40.0% |
| TTCCAATTGGTCCAGATGAA+CGG | - | chr6_4:31970407-31970426 | None:intergenic | 40.0% | |
| CAAGCAATTAAGGAGGATGA+AGG | + | chr6_4:31970484-31970503 | Msa0985440:three_prime_UTR | 40.0% | |
| AGCATTGTTCCCAAAAACTG+AGG | + | chr6_4:31970525-31970544 | Msa0985440:three_prime_UTR | 40.0% | |
| GTGGCAGGCATAAATTGAAT+AGG | - | chr6_4:31970723-31970742 | None:intergenic | 40.0% | |
| ATTCAATTTATGCCTGCCAC+AGG | + | chr6_4:31970723-31970742 | Msa0985440:intron | 40.0% | |
| TTCAATTTATGCCTGCCACA+GGG | + | chr6_4:31970724-31970743 | Msa0985440:intron | 40.0% | |
| CATTGTATATGGTTTCCCTG+TGG | - | chr6_4:31970742-31970761 | None:intergenic | 40.0% | |
| ! | TGTCTGAAGTTGAGAAAGAG+TGG | - | chr6_4:31970817-31970836 | None:intergenic | 40.0% |
| CAATTATCGCAACTCACAGT+TGG | - | chr6_4:31970852-31970871 | None:intergenic | 40.0% | |
| TGACCTATAACAGATGGTCT+TGG | - | chr6_4:31970954-31970973 | None:intergenic | 40.0% | |
| ATCTGGGCTTTCGAAATCTT+TGG | - | chr6_4:31971039-31971058 | None:intergenic | 40.0% | |
| GTTTAGTTGAGCACGTATCT+GGG | - | chr6_4:31971055-31971074 | None:intergenic | 40.0% | |
| TGTTTAGTTGAGCACGTATC+TGG | - | chr6_4:31971056-31971075 | None:intergenic | 40.0% | |
| ! | GGAAGTCCTAGGCAGTATTT+TGG | - | chr6_4:31966397-31966416 | None:intergenic | 45.0% |
| CTTATAGGGATGGAAGTCCT+AGG | - | chr6_4:31966408-31966427 | None:intergenic | 45.0% | |
| CACCTCATGCCAAATGAACT+AGG | + | chr6_4:31966467-31966486 | Msa0985440:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | - | chr6_4:31966561-31966580 | None:intergenic | 45.0% | |
| ACACAACACAACCCTTTGTG+TGG | - | chr6_4:31966580-31966599 | None:intergenic | 45.0% | |
| ACACAAAGGGTTGTGTTGTG+TGG | + | chr6_4:31966579-31966598 | Msa0985440:intron | 45.0% | |
| TGTGGCACAGATGTGTTGTA+TGG | + | chr6_4:31966597-31966616 | Msa0985440:intron | 45.0% | |
| GTGGCACAGATGTGTTGTAT+GGG | + | chr6_4:31966598-31966617 | Msa0985440:intron | 45.0% | |
| ACACAACACACACCTTTGTG+TGG | - | chr6_4:31966640-31966659 | None:intergenic | 45.0% | |
| GATTTATAGGGGTGGCACTT+TGG | - | chr6_4:31966697-31966716 | None:intergenic | 45.0% | |
| TGGGGTATGATTTATAGGGG+TGG | - | chr6_4:31966705-31966724 | None:intergenic | 45.0% | |
| AGCAAAACGTCACTTCCTTG+GGG | + | chr6_4:31967394-31967413 | Msa0985440:three_prime_UTR | 45.0% | |
| !! | CTGTTCGAGTTGTTGACATG+TGG | + | chr6_4:31968467-31968486 | Msa0985440:three_prime_UTR | 45.0% |
| AGATCAAGAAGGGAGGAGTA+AGG | + | chr6_4:31968890-31968909 | Msa0985440:three_prime_UTR | 45.0% | |
| GGATACACTCAGACTCAACA+AGG | + | chr6_4:31969042-31969061 | Msa0985440:three_prime_UTR | 45.0% | |
| CTCAGACTCAACAAGGATCT+AGG | + | chr6_4:31969049-31969068 | Msa0985440:three_prime_UTR | 45.0% | |
| !! | CAGCTTTGTTGGTAAAGTCC+AGG | - | chr6_4:31969240-31969259 | None:intergenic | 45.0% |
| GCTAAGATTAAGGAAGCCAC+AGG | + | chr6_4:31969292-31969311 | Msa0985440:three_prime_UTR | 45.0% | |
| TTTCAATCCTGAATTCCCCG+AGG | + | chr6_4:31969451-31969470 | Msa0985440:three_prime_UTR | 45.0% | |
| GTTTGAATTCAAGGACCTCG+GGG | - | chr6_4:31969469-31969488 | None:intergenic | 45.0% | |
| GCGTCATACTTGACGAAGAA+GGG | - | chr6_4:31969659-31969678 | None:intergenic | 45.0% | |
| TGCGTCATACTTGACGAAGA+AGG | - | chr6_4:31969660-31969679 | None:intergenic | 45.0% | |
| AGAGATTATGCAACTCACGG+AGG | + | chr6_4:31969731-31969750 | Msa0985440:three_prime_UTR | 45.0% | |
| GTCACACACACAGTTGTCTT+TGG | - | chr6_4:31969909-31969928 | None:intergenic | 45.0% | |
| TGAAACCATCCAAGAATGGG+TGG | + | chr6_4:31969949-31969968 | Msa0985440:three_prime_UTR | 45.0% | |
| TAGTACCACCCATTCTTGGA+TGG | - | chr6_4:31969957-31969976 | None:intergenic | 45.0% | |
| CGTGAGTGCAATGAATTGCT+TGG | + | chr6_4:31970221-31970240 | Msa0985440:three_prime_UTR | 45.0% | |
| TACTGCTGCTGAACTTCAGA+GGG | + | chr6_4:31970247-31970266 | Msa0985440:three_prime_UTR | 45.0% | |
| TCCAATTGGTCCAGATGAAC+GGG | - | chr6_4:31970406-31970425 | None:intergenic | 45.0% | |
| AAGTTAAGTGGCAGCCAACT+TGG | + | chr6_4:31970446-31970465 | Msa0985440:three_prime_UTR | 45.0% | |
| AGTTAAGTGGCAGCCAACTT+GGG | + | chr6_4:31970447-31970466 | Msa0985440:three_prime_UTR | 45.0% | |
| CAGCCAAGACCATCTGTTAT+AGG | + | chr6_4:31970948-31970967 | Msa0985440:intron | 45.0% | |
| GGGCTTTCGAAATCTTTGGT+AGG | - | chr6_4:31971035-31971054 | None:intergenic | 45.0% | |
| !!! | ATAAAATAGTTTAAATTTTA+GGG | + | chr6_4:31966353-31966372 | Msa0985440:intron | 5.0% |
| !!! | TTTAAATTTTATTTAATTTC+AGG | - | chr6_4:31966859-31966878 | None:intergenic | 5.0% |
| ! | TTCTTGTTGGTGCTTCCCCA+AGG | + | chr6_4:31965666-31965685 | Msa0985440:CDS | 50.0% |
| GGCCTAGTTCATTTGGCATG+AGG | - | chr6_4:31966472-31966491 | None:intergenic | 50.0% | |
| TAAGAGAAGCCGCAGCCAAA+TGG | - | chr6_4:31967155-31967174 | None:intergenic | 50.0% | |
| ! | TGCGGCTTTGGTTGACAAGT+GGG | + | chr6_4:31967244-31967263 | Msa0985440:three_prime_UTR | 50.0% |
| AGTGTGGTTGTGTCGTGAAG+AGG | + | chr6_4:31967325-31967344 | Msa0985440:three_prime_UTR | 50.0% | |
| GTGTGGTTGTGTCGTGAAGA+GGG | + | chr6_4:31967326-31967345 | Msa0985440:three_prime_UTR | 50.0% | |
| GTTGTGTCGTGAAGAGGGAA+AGG | + | chr6_4:31967331-31967350 | Msa0985440:three_prime_UTR | 50.0% | |
| TGTCGTGAAGAGGGAAAGGA+GGG | + | chr6_4:31967335-31967354 | Msa0985440:three_prime_UTR | 50.0% | |
| GCAAAACGTCACTTCCTTGG+GGG | + | chr6_4:31967395-31967414 | Msa0985440:three_prime_UTR | 50.0% | |
| GGGTTGTACTTCTGCAGAGA+AGG | + | chr6_4:31967422-31967441 | Msa0985440:three_prime_UTR | 50.0% | |
| AGAGAGAGAGAGAGAGCTAC+CGG | - | chr6_4:31967522-31967541 | None:intergenic | 50.0% | |
| ! | TCCATAGATCGGTTCCTGCT+TGG | + | chr6_4:31968002-31968021 | Msa0985440:intron | 50.0% |
| TCCAAGCAGGAACCGATCTA+TGG | - | chr6_4:31968006-31968025 | None:intergenic | 50.0% | |
| ! | GGTGTTGTGTGACAAAGAGG+TGG | + | chr6_4:31968528-31968547 | Msa0985440:intron | 50.0% |
| GTAAGGCCAGATGTCCTGAT+AGG | + | chr6_4:31968907-31968926 | Msa0985440:three_prime_UTR | 50.0% | |
| ! | TGGTCCAGACTCAGCTTTGT+TGG | - | chr6_4:31969251-31969270 | None:intergenic | 50.0% |
| GAGAATGCTGGGTCATCAAG+AGG | - | chr6_4:31969597-31969616 | None:intergenic | 50.0% | |
| ! | GCTGACTCTGTGAGAATGCT+GGG | - | chr6_4:31969608-31969627 | None:intergenic | 50.0% |
| !! | TGCTGACTCTGTGAGAATGC+TGG | - | chr6_4:31969609-31969628 | None:intergenic | 50.0% |
| AAGCATGCACCAAGTGCAAC+AGG | + | chr6_4:31969979-31969998 | Msa0985440:three_prime_UTR | 50.0% | |
| AGCATGCACCAAGTGCAACA+GGG | + | chr6_4:31969980-31969999 | Msa0985440:three_prime_UTR | 50.0% | |
| AAGTGCAACAGGGCTGCAAA+GGG | + | chr6_4:31969990-31970009 | Msa0985440:three_prime_UTR | 50.0% | |
| CTACTGCTGCTGAACTTCAG+AGG | + | chr6_4:31970246-31970265 | Msa0985440:three_prime_UTR | 50.0% | |
| !! | GGCTGGTGTCACAAATCCTT+TGG | + | chr6_4:31970375-31970394 | Msa0985440:intron | 50.0% |
| TCCCGTTCATCTGGACCAAT+TGG | + | chr6_4:31970402-31970421 | Msa0985440:three_prime_UTR | 50.0% | |
| ACAGAACAGCTGTCCCAAGT+TGG | - | chr6_4:31970463-31970482 | None:intergenic | 50.0% | |
| GTATATGGTTTCCCTGTGGC+AGG | - | chr6_4:31970738-31970757 | None:intergenic | 50.0% | |
| TGCCAATCTTCGATCACACC+AGG | + | chr6_4:31970987-31971006 | Msa0985440:three_prime_UTR | 50.0% | |
| TGCCTGGTGTGATCGAAGAT+TGG | - | chr6_4:31970992-31971011 | None:intergenic | 50.0% | |
| CACACCAGGCAAAAGAGTTG+CGG | + | chr6_4:31971001-31971020 | Msa0985440:three_prime_UTR | 50.0% | |
| ! | TCATCCGCAACTCTTTTGCC+TGG | - | chr6_4:31971008-31971027 | None:intergenic | 50.0% |
| ! | CTGCGTGAGTGTGTGCCATT+TGG | + | chr6_4:31967137-31967156 | Msa0985440:CDS | 55.0% |
| !! | GAGTGTGTGCCATTTGGCTG+CGG | + | chr6_4:31967143-31967162 | Msa0985440:CDS | 55.0% |
| ! | CTGCGTGAGTGTGTGCCATT+TGG | + | chr6_4:31967137-31967156 | Msa0985440:CDS | 55.0% |
| !! | GAGTGTGTGCCATTTGGCTG+CGG | + | chr6_4:31967143-31967162 | Msa0985440:CDS | 55.0% |
| CAACCAAAGCCGCAGCCAAA+TGG | - | chr6_4:31967238-31967257 | None:intergenic | 55.0% | |
| ! | CTGCGGCTTTGGTTGACAAG+TGG | + | chr6_4:31967243-31967262 | Msa0985440:three_prime_UTR | 55.0% |
| GTGTCGTGAAGAGGGAAAGG+AGG | + | chr6_4:31967334-31967353 | Msa0985440:three_prime_UTR | 55.0% | |
| GTCACTTCCTTGGGGGAAGT+GGG | + | chr6_4:31967402-31967421 | Msa0985440:three_prime_UTR | 55.0% | |
| AGTACAACCCACTTCCCCCA+AGG | - | chr6_4:31967412-31967431 | None:intergenic | 55.0% | |
| AGCTCGGGGTCTCTAATGCA+TGG | + | chr6_4:31969411-31969430 | Msa0985440:three_prime_UTR | 55.0% | |
| TCAAGGACCTCGGGGAATTC+AGG | - | chr6_4:31969461-31969480 | None:intergenic | 55.0% | |
| CTTTGCAGCCCTGTTGCACT+TGG | - | chr6_4:31969991-31970010 | None:intergenic | 55.0% | |
| CAAGTGCAACAGGGCTGCAA+AGG | + | chr6_4:31969989-31970008 | Msa0985440:three_prime_UTR | 55.0% | |
| ! | AAGGGAGTGCACGCTGAACC+AGG | + | chr6_4:31967101-31967120 | Msa0985440:intron | 60.0% |
| ! | AGGGAGTGCACGCTGAACCA+GGG | + | chr6_4:31967102-31967121 | Msa0985440:intron | 60.0% |
| CTGAACCAGGGAGCGACATC+TGG | + | chr6_4:31967114-31967133 | Msa0985440:CDS | 60.0% | |
| ! | AAGGGAGTGCACGCTGAACC+AGG | + | chr6_4:31967101-31967120 | Msa0985440:intron | 60.0% |
| ! | AGGGAGTGCACGCTGAACCA+GGG | + | chr6_4:31967102-31967121 | Msa0985440:intron | 60.0% |
| CTGAACCAGGGAGCGACATC+TGG | + | chr6_4:31967114-31967133 | Msa0985440:CDS | 60.0% | |
| !! | GTGCCATTTGGCTGCGGCTT+TGG | + | chr6_4:31967149-31967168 | Msa0985440:CDS | 60.0% |
| CGTCACTTCCTTGGGGGAAG+TGG | + | chr6_4:31967401-31967420 | Msa0985440:three_prime_UTR | 60.0% | |
| CGCAGCCAGATGTCGCTCCC+TGG | - | chr6_4:31967122-31967141 | None:intergenic | 70.0% | |
| CGCAGCCAGATGTCGCTCCC+TGG | - | chr6_4:31967122-31967141 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 31965278 | 31971364 | 31965278 | ID=Msa0985440;Name=Msa0985440 |
| chr6_4 | mRNA | 31965278 | 31971364 | 31965278 | ID=Msa0985440-mRNA-1;Parent=Msa0985440;Name=Msa0985440-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.93|0.88|1|0.75|0.88|17|2233|158 |
| chr6_4 | exon | 31965278 | 31965479 | 31965278 | ID=Msa0985440-mRNA-1:exon:8501;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31965492 | 31965687 | 31965492 | ID=Msa0985440-mRNA-1:exon:8502;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31967104 | 31967521 | 31967104 | ID=Msa0985440-mRNA-1:exon:8503;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31967639 | 31967663 | 31967639 | ID=Msa0985440-mRNA-1:exon:8504;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31967864 | 31967888 | 31967864 | ID=Msa0985440-mRNA-1:exon:8505;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31968401 | 31968546 | 31968401 | ID=Msa0985440-mRNA-1:exon:8506;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31968661 | 31968928 | 31968661 | ID=Msa0985440-mRNA-1:exon:8507;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31969016 | 31969106 | 31969016 | ID=Msa0985440-mRNA-1:exon:8508;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31969189 | 31969313 | 31969189 | ID=Msa0985440-mRNA-1:exon:8509;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31969402 | 31969492 | 31969402 | ID=Msa0985440-mRNA-1:exon:8510;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31969590 | 31969752 | 31969590 | ID=Msa0985440-mRNA-1:exon:8511;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31969912 | 31970069 | 31969912 | ID=Msa0985440-mRNA-1:exon:8512;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31970160 | 31970280 | 31970160 | ID=Msa0985440-mRNA-1:exon:8513;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31970376 | 31970546 | 31970376 | ID=Msa0985440-mRNA-1:exon:8514;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31970636 | 31970677 | 31970636 | ID=Msa0985440-mRNA-1:exon:8515;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31970801 | 31970854 | 31970801 | ID=Msa0985440-mRNA-1:exon:8516;Parent=Msa0985440-mRNA-1 |
| chr6_4 | exon | 31970951 | 31971364 | 31970951 | ID=Msa0985440-mRNA-1:exon:8517;Parent=Msa0985440-mRNA-1 |
| chr6_4 | CDS | 31965278 | 31965479 | 31965278 | ID=Msa0985440-mRNA-1:cds;Parent=Msa0985440-mRNA-1 |
| chr6_4 | CDS | 31965492 | 31965687 | 31965492 | ID=Msa0985440-mRNA-1:cds;Parent=Msa0985440-mRNA-1 |
| chr6_4 | CDS | 31967104 | 31967182 | 31967104 | ID=Msa0985440-mRNA-1:cds;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31967183 | 31967521 | 31967183 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31967639 | 31967663 | 31967639 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31967864 | 31967888 | 31967864 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31968401 | 31968546 | 31968401 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31968661 | 31968928 | 31968661 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31969016 | 31969106 | 31969016 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31969189 | 31969313 | 31969189 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31969402 | 31969492 | 31969402 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31969590 | 31969752 | 31969590 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31969912 | 31970069 | 31969912 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31970160 | 31970280 | 31970160 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31970376 | 31970546 | 31970376 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31970636 | 31970677 | 31970636 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31970801 | 31970854 | 31970801 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| chr6_4 | three_prime_UTR | 31970951 | 31971364 | 31970951 | ID=Msa0985440-mRNA-1:three_prime_utr;Parent=Msa0985440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
