Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988990 | XP_013452356.1 | 89.286 | 700 | 6 | 2 | 1 | 631 | 1 | 700 | 0.0 | 1257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988990 | sp|Q93ZQ5|SPXM3_ARATH | 69.231 | 702 | 142 | 5 | 1 | 631 | 1 | 699 | 0.0 | 971 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988990 | A0A072U9A9 | 89.286 | 700 | 6 | 2 | 1 | 631 | 1 | 700 | 0.0 | 1257 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0981900 | Msa0988990 | 0.803460 | 3.448777e-49 | -8.615850e-47 |
| Msa0915350 | Msa0988990 | 0.893454 | 6.194245e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988990 | MtrunA17_Chr6g0470311 | 89.286 | 700 | 6 | 2 | 1 | 631 | 1 | 700 | 0.0 | 1257 |
| Msa0988990 | MtrunA17_Chr1g0202441 | 75.000 | 700 | 97 | 4 | 1 | 631 | 1 | 691 | 0.0 | 1030 |
| Msa0988990 | MtrunA17_Chr7g0246901 | 60.311 | 708 | 195 | 6 | 1 | 631 | 1 | 699 | 0.0 | 845 |
| Msa0988990 | MtrunA17_Chr7g0253691 | 57.692 | 130 | 53 | 2 | 188 | 315 | 1 | 130 | 2.20e-46 | 160 |
| Msa0988990 | MtrunA17_Chr7g0253831 | 50.847 | 59 | 29 | 0 | 185 | 243 | 20 | 78 | 2.24e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988990 | AT4G22990.1 | 69.231 | 702 | 142 | 5 | 1 | 631 | 1 | 699 | 0.0 | 971 |
| Msa0988990 | AT4G22990.3 | 69.275 | 703 | 141 | 6 | 1 | 631 | 1 | 700 | 0.0 | 967 |
| Msa0988990 | AT4G22990.2 | 69.275 | 703 | 141 | 6 | 1 | 631 | 1 | 700 | 0.0 | 967 |
| Msa0988990 | AT4G11810.2 | 68.794 | 705 | 141 | 5 | 1 | 631 | 1 | 700 | 0.0 | 964 |
| Msa0988990 | AT4G11810.3 | 68.794 | 705 | 141 | 5 | 1 | 631 | 1 | 700 | 0.0 | 964 |
| Msa0988990 | AT4G11810.1 | 68.503 | 708 | 145 | 5 | 1 | 631 | 1 | 707 | 0.0 | 961 |
| Msa0988990 | AT1G63010.6 | 66.904 | 701 | 160 | 4 | 1 | 631 | 1 | 699 | 0.0 | 913 |
| Msa0988990 | AT1G63010.2 | 67.143 | 700 | 158 | 4 | 1 | 631 | 1 | 697 | 0.0 | 913 |
| Msa0988990 | AT1G63010.1 | 66.904 | 701 | 160 | 4 | 1 | 631 | 1 | 699 | 0.0 | 913 |
| Msa0988990 | AT1G63010.3 | 66.904 | 701 | 160 | 4 | 1 | 631 | 1 | 699 | 0.0 | 913 |
| Msa0988990 | AT1G63010.4 | 66.904 | 701 | 160 | 4 | 1 | 631 | 1 | 699 | 0.0 | 913 |
| Msa0988990 | AT1G63010.7 | 66.904 | 701 | 160 | 4 | 1 | 631 | 1 | 699 | 0.0 | 913 |
| Msa0988990 | AT1G63010.5 | 66.056 | 710 | 160 | 5 | 1 | 631 | 1 | 708 | 0.0 | 905 |
Find 159 sgRNAs with CRISPR-Local
Find 518 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGGTTTGCGGTATTGTTAT+TGG | 0.220881 | 6_4:+44162862 | Msa0988990:CDS |
| CGGTTTGCGGTATTGTTATT+GGG | 0.230179 | 6_4:+44162863 | Msa0988990:CDS |
| CTCACGAATGTTGGATAATC+AGG | 0.234778 | 6_4:+44161361 | Msa0988990:CDS |
| GAACTAAGAGTTAAGGTATT+TGG | 0.253596 | 6_4:+44166449 | Msa0988990:three_prime_UTR |
| GGTTGTTTCAATGTGAATTT+TGG | 0.266302 | 6_4:+44166233 | Msa0988990:three_prime_UTR |
| ATATTTGCAGATTCATGTTT+TGG | 0.290884 | 6_4:+44158982 | Msa0988990:intron |
| ATACCAACATTTGACTGATT+TGG | 0.295636 | 6_4:-44164206 | None:intergenic |
| CGCCTTCCGGCCAATTCAAT+TGG | 0.315802 | 6_4:+44164544 | Msa0988990:CDS |
| CATATGATGTTCATTCAATA+TGG | 0.323974 | 6_4:+44163010 | Msa0988990:CDS |
| CAGGAAGAGATGGTTGCCTT+TGG | 0.326467 | 6_4:+44161081 | Msa0988990:intron |
| GGTTATGGCTGTTGCTTGGC+TGG | 0.326760 | 6_4:+44164118 | Msa0988990:CDS |
| TCTGTTGACATCAGAAATAA+TGG | 0.329091 | 6_4:+44165380 | Msa0988990:CDS |
| TAACCCTAACTATATCAAAA+AGG | 0.337031 | 6_4:-44166343 | None:intergenic |
| GACAATGGTGCACTAGAAAA+AGG | 0.342663 | 6_4:+44164427 | Msa0988990:CDS |
| TCATCCGAAGTAATTAATAA+TGG | 0.348554 | 6_4:-44164460 | None:intergenic |
| GTTGGAGCAACAAGGGCTTT+TGG | 0.352854 | 6_4:+44161612 | Msa0988990:CDS |
| TCTTATGGCTCACGAACATT+TGG | 0.352924 | 6_4:+44166183 | Msa0988990:three_prime_UTR |
| CTTGGCTGGTATATCTAGTA+TGG | 0.353321 | 6_4:+44164132 | Msa0988990:CDS |
| AAGGAAGCAAGGTGACATTA+AGG | 0.360449 | 6_4:-44166044 | None:intergenic |
| TTTAATCAAAATACCTTGCC+TGG | 0.361479 | 6_4:+44164092 | Msa0988990:CDS |
| AGAAATGCATAATGATTTGC+AGG | 0.361991 | 6_4:+44161657 | Msa0988990:CDS |
| TCAGCAGAAGAGACATAAAA+TGG | 0.367401 | 6_4:-44162750 | None:intergenic |
| TACCTTGCCTGGGTGGGTTA+TGG | 0.370145 | 6_4:+44164103 | Msa0988990:CDS |
| TATTTATTATATAAACTAAC+AGG | 0.372166 | 6_4:-44158608 | None:intergenic |
| CTGTTGTGTCTTTCCAGCTT+AGG | 0.373574 | 6_4:-44158691 | None:intergenic |
| CTTGTTGCTCCAACAGGAAT+AGG | 0.377584 | 6_4:-44161603 | None:intergenic |
| GTTAAGAAAGTTTGTTGAGT+TGG | 0.378222 | 6_4:-44162650 | None:intergenic |
| GAACATTTGGAAAAGTATCT+AGG | 0.383875 | 6_4:+44166196 | Msa0988990:three_prime_UTR |
| ATAGGATAGAAATCAGTATA+AGG | 0.384183 | 6_4:-44166118 | None:intergenic |
| TGTAAATCTTAAAATTAGTC+TGG | 0.390083 | 6_4:-44164061 | None:intergenic |
| GAGGTCTCATATTCAAATAC+AGG | 0.395055 | 6_4:+44166471 | Msa0988990:three_prime_UTR |
| TCTATAAGATTCTCTTAGTT+CGG | 0.399596 | 6_4:-44161704 | None:intergenic |
| ATTAATTACTTCGGATGATA+AGG | 0.399649 | 6_4:+44164465 | Msa0988990:CDS |
| ATATGCTCAACAAATTCAAC+AGG | 0.404356 | 6_4:+44161304 | Msa0988990:CDS |
| TGGTATATCTAGTATGGTTA+TGG | 0.409048 | 6_4:+44164138 | Msa0988990:CDS |
| CCTCACTATCATCATAATCT+TGG | 0.413464 | 6_4:-44164504 | None:intergenic |
| ATTTGTTTCTGCTGAAGTAC+TGG | 0.415121 | 6_4:+44165482 | Msa0988990:CDS |
| GAGCCGCAATACATCTGTTC+GGG | 0.417764 | 6_4:+44165450 | Msa0988990:CDS |
| TAGGAACAGAAAACCACTTT+CGG | 0.421275 | 6_4:-44158672 | None:intergenic |
| CTTCAGCAGAAACAAATAGA+AGG | 0.422993 | 6_4:-44165476 | None:intergenic |
| TTTCATGCTTAAATATGTAA+TGG | 0.423162 | 6_4:+44164900 | Msa0988990:CDS |
| AAGAAGTTTGATAAGCGCTT+TGG | 0.425190 | 6_4:+44161799 | Msa0988990:CDS |
| AAAGCCCTTGTTGCTCCAAC+AGG | 0.429226 | 6_4:-44161609 | None:intergenic |
| CACAATCAAATTTACTAAAG+TGG | 0.429259 | 6_4:-44166531 | None:intergenic |
| AAATCAGTATAAGGAATTGT+AGG | 0.433519 | 6_4:-44166109 | None:intergenic |
| AGATAAATGCAGCTGTTGAT+AGG | 0.434734 | 6_4:+44162623 | Msa0988990:CDS |
| GGTGGGTTATGGCTGTTGCT+TGG | 0.437757 | 6_4:+44164114 | Msa0988990:CDS |
| GATGCTACCATTACATTGGC+TGG | 0.438357 | 6_4:+44166000 | Msa0988990:CDS |
| CAAGGATTTCTCACGAATGT+TGG | 0.440041 | 6_4:+44161352 | Msa0988990:CDS |
| TATGTCTCTTCTGCTGAACT+TGG | 0.443700 | 6_4:+44162756 | Msa0988990:CDS |
| GGTGCTGCGCCAACGGTTTG+CGG | 0.445449 | 6_4:+44162850 | Msa0988990:CDS |
| GTATGCCGATCCAATTGAAT+TGG | 0.445666 | 6_4:-44164554 | None:intergenic |
| AGGAAGAGATGGTTGCCTTT+GGG | 0.447176 | 6_4:+44161082 | Msa0988990:intron |
| TTCGTAGAGATTAATGCTGT+TGG | 0.448284 | 6_4:+44161760 | Msa0988990:CDS |
| TAAGGAATTGTAGGTATAGC+AGG | 0.450373 | 6_4:-44166100 | None:intergenic |
| GCTTGAACACTTGTTGCAGC+TGG | 0.451320 | 6_4:-44161873 | None:intergenic |
| ACTTGTTGCAGCTGGGAGTA+AGG | 0.455310 | 6_4:-44161865 | None:intergenic |
| ATCTAGGTTGTTATTTATGT+AGG | 0.457284 | 6_4:+44166212 | Msa0988990:three_prime_UTR |
| GTTCTGCCAGAGCTGTTAAC+CGG | 0.460864 | 6_4:+44163928 | Msa0988990:CDS |
| TCTTTCAATCTGAGCCTCAT+AGG | 0.464290 | 6_4:-44166136 | None:intergenic |
| TTTGTTAGTGCTAGTGCTCT+CGG | 0.464523 | 6_4:+44164005 | Msa0988990:CDS |
| TCCAGAGGAATCTCGCCTTC+CGG | 0.464550 | 6_4:+44164531 | Msa0988990:CDS |
| TGAGCCGCAATACATCTGTT+CGG | 0.471213 | 6_4:+44165449 | Msa0988990:CDS |
| TACAAAGTGGTTGCTGCAGC+TGG | 0.471235 | 6_4:+44159008 | Msa0988990:five_prime_UTR |
| TCACAACATACTACTTCAAC+TGG | 0.471558 | 6_4:+44164950 | Msa0988990:CDS |
| GCCGGAAGGCGAGATTCCTC+TGG | 0.472849 | 6_4:-44164532 | None:intergenic |
| GGTCGAACAAATCATACTTT+AGG | 0.476488 | 6_4:+44162932 | Msa0988990:CDS |
| ATGTATTGCGGCTCAGAATA+CGG | 0.478924 | 6_4:-44165441 | None:intergenic |
| GAAGATTGTCCTATTCCTGT+TGG | 0.479282 | 6_4:+44161594 | Msa0988990:CDS |
| ATACTGATTTCTATCCTATG+AGG | 0.479606 | 6_4:+44166122 | Msa0988990:exon |
| ATAACGCCGGTTAACAGCTC+TGG | 0.481572 | 6_4:-44163934 | None:intergenic |
| ACAACCATTATTAATTACTT+CGG | 0.483175 | 6_4:+44164456 | Msa0988990:CDS |
| AAGCCTTGGTGCTGCGCCAA+CGG | 0.484006 | 6_4:+44162843 | Msa0988990:CDS |
| ATTTAAAACCAATCCGAAAG+TGG | 0.485542 | 6_4:+44158659 | Msa0988990:five_prime_UTR |
| ACTCCTTACACCTTCTGTAA+AGG | 0.487803 | 6_4:+44164579 | Msa0988990:CDS |
| GCATGCGGTCCTGCATTAGC+TGG | 0.489381 | 6_4:+44164032 | Msa0988990:CDS |
| CGGTATTGTTATTGGGGCAA+TGG | 0.490078 | 6_4:+44162870 | Msa0988990:CDS |
| GGTCTTCTGTCTACCGAGGC+TGG | 0.495405 | 6_4:+44165955 | Msa0988990:CDS |
| TGGGGCAATGGCTGTTGCAC+AGG | 0.495692 | 6_4:+44162882 | Msa0988990:CDS |
| AGACAGAAGACCGCCATTGT+AGG | 0.505097 | 6_4:-44165944 | None:intergenic |
| TAAATGAATTGATGCTGGGC+TGG | 0.505650 | 6_4:+44166382 | Msa0988990:three_prime_UTR |
| ACAGAAAACCACTTTCGGAT+TGG | 0.509466 | 6_4:-44158667 | None:intergenic |
| TCAGAAATAATGGTTTGCAT+TGG | 0.511193 | 6_4:+44165390 | Msa0988990:CDS |
| AGAGAATCTTATAGAACAGT+TGG | 0.512302 | 6_4:+44161712 | Msa0988990:CDS |
| TCTAGCAATTGTTCCAGCCT+CGG | 0.513035 | 6_4:-44165968 | None:intergenic |
| CTAAGAGTTAAGGTATTTGG+AGG | 0.516674 | 6_4:+44166452 | Msa0988990:three_prime_UTR |
| AAACCTTTACAGAAGGTGTA+AGG | 0.517759 | 6_4:-44164582 | None:intergenic |
| GGATGTAAATGAATTGATGC+TGG | 0.520064 | 6_4:+44166377 | Msa0988990:three_prime_UTR |
| ATCCGCATGCAAGCATCAGC+TGG | 0.522900 | 6_4:+44163981 | Msa0988990:CDS |
| CAGAATACGGAAAGATTACA+TGG | 0.525040 | 6_4:-44165428 | None:intergenic |
| CTGGTTTGAACTAAGAGTTA+AGG | 0.525046 | 6_4:+44166442 | Msa0988990:three_prime_UTR |
| ATCTTTCAACTTCTTCCCAA+AGG | 0.528111 | 6_4:-44161097 | None:intergenic |
| TCCGGCCAATTCAATTGGAT+CGG | 0.530663 | 6_4:+44164549 | Msa0988990:CDS |
| TCAAAATACCTTGCCTGGGT+GGG | 0.530997 | 6_4:+44164097 | Msa0988990:CDS |
| GCCGATCCAATTGAATTGGC+CGG | 0.537673 | 6_4:-44164550 | None:intergenic |
| CTTGAACACTTGTTGCAGCT+GGG | 0.540460 | 6_4:-44161872 | None:intergenic |
| TGGAGTATGCCAGCTAATGC+AGG | 0.540646 | 6_4:-44164041 | None:intergenic |
| GCAAGCAGGATAGCAAAGCT+TGG | 0.542754 | 6_4:+44161634 | Msa0988990:CDS |
| GTTAGGGTTAGGATGAGTTG+AGG | 0.545156 | 6_4:+44166356 | Msa0988990:three_prime_UTR |
| TTAATCAAAATACCTTGCCT+GGG | 0.548395 | 6_4:+44164093 | Msa0988990:CDS |
| ATCAAAATACCTTGCCTGGG+TGG | 0.551248 | 6_4:+44164096 | Msa0988990:CDS |
| GCATTTATCTTATCAACCAC+AGG | 0.551308 | 6_4:-44162610 | None:intergenic |
| AAGATAGACAGATTCAAGAA+TGG | 0.553228 | 6_4:+44161115 | Msa0988990:CDS |
| TCATATTCAAATACAGGCAA+AGG | 0.553355 | 6_4:+44166477 | Msa0988990:three_prime_UTR |
| GATGATTACTCTACAAGCCT+TGG | 0.554973 | 6_4:+44162829 | Msa0988990:CDS |
| GGTTTGCGGTATTGTTATTG+GGG | 0.555920 | 6_4:+44162864 | Msa0988990:CDS |
| CTATTCCTGTTGGAGCAACA+AGG | 0.557513 | 6_4:+44161604 | Msa0988990:CDS |
| GCAACAGCCATAACCCACCC+AGG | 0.557616 | 6_4:-44164110 | None:intergenic |
| TTGATGATTGCAGGAAGAGA+TGG | 0.564317 | 6_4:+44161071 | Msa0988990:intron |
| CTTTCTCGCGGAACCTACAA+TGG | 0.568099 | 6_4:+44165931 | Msa0988990:CDS |
| TTCTCTTCAGCAAAATGAGA+AGG | 0.569235 | 6_4:-44164176 | None:intergenic |
| TATGAGGCTCAGATTGAAAG+AGG | 0.571442 | 6_4:+44166138 | Msa0988990:three_prime_UTR |
| TGCTGATGCTACCATTACAT+TGG | 0.571641 | 6_4:+44165996 | Msa0988990:CDS |
| GTTTCTGCTGAAGTACTGGA+AGG | 0.572116 | 6_4:+44165486 | Msa0988990:CDS |
| TTCAACAGGGGACACTAGAT+CGG | 0.572677 | 6_4:+44161318 | Msa0988990:CDS |
| GTAGAGTAATCATCTGCTGT+AGG | 0.576453 | 6_4:-44162820 | None:intergenic |
| AATACTGAAATGACGAGTGA+AGG | 0.577088 | 6_4:-44166063 | None:intergenic |
| TCATCAACATGATCCTCAGA+AGG | 0.577671 | 6_4:-44162718 | None:intergenic |
| ATCCAATTGAATTGGCCGGA+AGG | 0.586214 | 6_4:-44164546 | None:intergenic |
| TAGTGCTAGTGCTCTCGGAA+TGG | 0.587476 | 6_4:+44164010 | Msa0988990:CDS |
| GATCCTCAGAAGGGGTAGGA+AGG | 0.587667 | 6_4:-44162708 | None:intergenic |
| CACAATCACTTATATAACGC+CGG | 0.592276 | 6_4:-44163947 | None:intergenic |
| GACAGATTCAAGAATGGCAA+GGG | 0.593850 | 6_4:+44161121 | Msa0988990:CDS |
| TCAATATGGATTCTCTTACT+CGG | 0.594024 | 6_4:+44163024 | Msa0988990:CDS |
| ACACCAAATCAGTCAAATGT+TGG | 0.596189 | 6_4:+44164203 | Msa0988990:CDS |
| CATCAACATGATCCTCAGAA+GGG | 0.599443 | 6_4:-44162717 | None:intergenic |
| AGTTCACAAACCTTTACAGA+AGG | 0.599727 | 6_4:-44164589 | None:intergenic |
| ATAACAATACCGCAAACCGT+TGG | 0.603223 | 6_4:-44162859 | None:intergenic |
| TTTCACGCGTCATGTCATCA+AGG | 0.603261 | 6_4:+44165908 | Msa0988990:CDS |
| CGACCTTCCTACCCCTTCTG+AGG | 0.604659 | 6_4:+44162705 | Msa0988990:CDS |
| AGACAGATTCAAGAATGGCA+AGG | 0.604663 | 6_4:+44161120 | Msa0988990:CDS |
| TAATCTCTACGAAATAGAGT+AGG | 0.608284 | 6_4:-44161750 | None:intergenic |
| GCCACGCTGCTGAATACAAG+AGG | 0.612304 | 6_4:-44162955 | None:intergenic |
| TATTCCTGTTGGAGCAACAA+GGG | 0.616259 | 6_4:+44161605 | Msa0988990:CDS |
| CCAAGATTATGATGATAGTG+AGG | 0.616400 | 6_4:+44164504 | Msa0988990:CDS |
| AAACCGTTGGCGCAGCACCA+AGG | 0.618514 | 6_4:-44162846 | None:intergenic |
| AGTGCTCTCGGAATGGCATG+CGG | 0.619551 | 6_4:+44164017 | Msa0988990:CDS |
| TGTCCCTGTGCAGTAGACAA+TGG | 0.622580 | 6_4:+44164397 | Msa0988990:intron |
| AACCAGCTGATGCTTGCATG+CGG | 0.629035 | 6_4:-44163983 | None:intergenic |
| TTACAGAAGGTGTAAGGAGT+CGG | 0.632745 | 6_4:-44164576 | None:intergenic |
| AGATCGGCGACATGTTCTCA+AGG | 0.632901 | 6_4:+44161334 | Msa0988990:CDS |
| GCAACAAGTGTTCAAGCATG+TGG | 0.632988 | 6_4:+44161879 | Msa0988990:CDS |
| ACATGATCCTCAGAAGGGGT+AGG | 0.632992 | 6_4:-44162712 | None:intergenic |
| GATGTAAATGAATTGATGCT+GGG | 0.634894 | 6_4:+44166378 | Msa0988990:three_prime_UTR |
| TGATAGTGAGGAAGCTCCAG+AGG | 0.635684 | 6_4:+44164516 | Msa0988990:CDS |
| GACAATGGTGCAGTAGACAA+TGG | 0.637298 | 6_4:+44164412 | Msa0988990:CDS |
| TTGTTGTCACATGCTATGCT+CGG | 0.648473 | 6_4:+44158507 | Msa0988990:intron |
| ATCAACATGATCCTCAGAAG+GGG | 0.653444 | 6_4:-44162716 | None:intergenic |
| AGCCATAACCCACCCAGGCA+AGG | 0.658541 | 6_4:-44164105 | None:intergenic |
| GCCTCTTGTATTCAGCAGCG+TGG | 0.666891 | 6_4:+44162954 | Msa0988990:CDS |
| AGACCCGAACAGATGTATTG+CGG | 0.670207 | 6_4:-44165453 | None:intergenic |
| AATGACGAGTGAAGGAAGCA+AGG | 0.674377 | 6_4:-44166055 | None:intergenic |
| TGGCGGTCTTCTGTCTACCG+AGG | 0.686571 | 6_4:+44165951 | Msa0988990:CDS |
| AATGCATAATGATTTGCAGG+AGG | 0.700598 | 6_4:+44161660 | Msa0988990:CDS |
| TATGCTCAACAAATTCAACA+GGG | 0.706724 | 6_4:+44161305 | Msa0988990:CDS |
| TCTCGCGGAACCTACAATGG+CGG | 0.707087 | 6_4:+44165934 | Msa0988990:CDS |
| GGAAAGACACAACAGAACAC+CGG | 0.709018 | 6_4:+44158699 | Msa0988990:five_prime_UTR |
| ATGTCATCAAGGCTTTCTCG+CGG | 0.709219 | 6_4:+44165919 | Msa0988990:CDS |
| ATGCTCAACAAATTCAACAG+GGG | 0.720657 | 6_4:+44161306 | Msa0988990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATTATATAAACTAAC+AGG | - | chr6_4:44158611-44158630 | None:intergenic | 10.0% |
| !!! | TATTGATTTAATTTACTTTA+AGG | + | chr6_4:44159399-44159418 | Msa0988990:intron | 10.0% |
| !!! | ATTGATTTAATTTACTTTAA+GGG | + | chr6_4:44159400-44159419 | Msa0988990:intron | 10.0% |
| !! | GTAAATTAAATCAATAAAAA+AGG | - | chr6_4:44159597-44159616 | None:intergenic | 10.0% |
| !! | AATTCATTATTACATTTAAA+AGG | - | chr6_4:44159796-44159815 | None:intergenic | 10.0% |
| !! | ATTTATATAGATATAGATTA+CGG | + | chr6_4:44159914-44159933 | Msa0988990:intron | 10.0% |
| !!! | AGAAATTTAAGATATTTAAA+AGG | - | chr6_4:44163141-44163160 | None:intergenic | 10.0% |
| !! | AAGACCAATAAAAATAAAAA+GGG | - | chr6_4:44159230-44159249 | None:intergenic | 15.0% |
| !! | TAAGACCAATAAAAATAAAA+AGG | - | chr6_4:44159231-44159250 | None:intergenic | 15.0% |
| !!! | TTGATTTAATTTACTTTAAG+GGG | + | chr6_4:44159401-44159420 | Msa0988990:intron | 15.0% |
| !!! | AAAAGTTTGATTTATTTGAA+AGG | + | chr6_4:44159846-44159865 | Msa0988990:intron | 15.0% |
| !! | AAGACCAATAAAAATAAAAA+GGG | - | chr6_4:44159230-44159249 | None:intergenic | 15.0% |
| !! | TAATATATTCAGTTCAAAAA+TGG | + | chr6_4:44161902-44161921 | Msa0988990:intron | 15.0% |
| !! | AAGAAAATATAAAACAAGAT+TGG | - | chr6_4:44162177-44162196 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAATCTGAAAA+TGG | - | chr6_4:44163486-44163505 | None:intergenic | 15.0% |
| !!! | TTTTCTCAAATTAATATCAA+AGG | - | chr6_4:44163652-44163671 | None:intergenic | 15.0% |
| !!! | TAATTAATAATGGTTGTTTT+AGG | - | chr6_4:44164453-44164472 | None:intergenic | 15.0% |
| !! | AAGAAATCTTATATAAAACA+TGG | - | chr6_4:44164755-44164774 | None:intergenic | 15.0% |
| !! | TAATTTCTCAAAAAAAGAAA+TGG | - | chr6_4:44165116-44165135 | None:intergenic | 15.0% |
| !! | AATAGAAAATAATCTCTATA+GGG | - | chr6_4:44165321-44165340 | None:intergenic | 15.0% |
| !!! | TTATGTTAAAATAGTCATTT+TGG | - | chr6_4:44165627-44165646 | None:intergenic | 15.0% |
| !!! | AAAATGACTATTTTAACATA+AGG | + | chr6_4:44165626-44165645 | Msa0988990:intron | 15.0% |
| !!! | AAATGACTATTTTAACATAA+GGG | + | chr6_4:44165627-44165646 | Msa0988990:intron | 15.0% |
| !! | ATCACAATAATGAAAAAATA+GGG | - | chr6_4:44165761-44165780 | None:intergenic | 15.0% |
| !! | AATCACAATAATGAAAAAAT+AGG | - | chr6_4:44165762-44165781 | None:intergenic | 15.0% |
| !!! | ATTTGTTTCAATTATTTTTC+TGG | + | chr6_4:44165821-44165840 | Msa0988990:intron | 15.0% |
| !!! | TGAATATCTTATTTTGAAAC+TGG | + | chr6_4:44158849-44158868 | Msa0988990:intron | 20.0% |
| !! | ATCAATAACCAATTGAAAAA+AGG | - | chr6_4:44159386-44159405 | None:intergenic | 20.0% |
| !! | AACCAATAACCAATTAAAAA+GGG | - | chr6_4:44159649-44159668 | None:intergenic | 20.0% |
| !! | AAACCAATAACCAATTAAAA+AGG | - | chr6_4:44159650-44159669 | None:intergenic | 20.0% |
| !!! | TGAATATCTTATTTTGAAAC+TGG | + | chr6_4:44158849-44158868 | Msa0988990:intron | 20.0% |
| !!! | ATATTTGCAGATTCATATTT+TGG | + | chr6_4:44160394-44160413 | Msa0988990:intron | 20.0% |
| !! | CAAGACCAATAAAAATAAAA+AGG | - | chr6_4:44160637-44160656 | None:intergenic | 20.0% |
| !! | AACCAATAACCAATTAAAAA+GGG | - | chr6_4:44159649-44159668 | None:intergenic | 20.0% |
| !! | AAACCAATAACCAATTAAAA+AGG | - | chr6_4:44159650-44159669 | None:intergenic | 20.0% |
| !! | AAATCAATAGCCAATTAAAA+AGG | - | chr6_4:44161023-44161042 | None:intergenic | 20.0% |
| !! | ATATGAGTAAATGTGATTAT+CGG | + | chr6_4:44161461-44161480 | Msa0988990:intron | 20.0% |
| !! | ATATGTATTTGAGAATTTCT+CGG | - | chr6_4:44161953-44161972 | None:intergenic | 20.0% |
| !! | TGATTATGTAAAATTGAATC+TGG | + | chr6_4:44162251-44162270 | Msa0988990:intron | 20.0% |
| !! | TAATAGATCAAGTGTATATT+TGG | - | chr6_4:44162506-44162525 | None:intergenic | 20.0% |
| !! | TAAGATATTTAAAAGGCAAA+AGG | - | chr6_4:44163134-44163153 | None:intergenic | 20.0% |
| !! | CCATTTATAAACAAAAATTC+TGG | - | chr6_4:44163508-44163527 | None:intergenic | 20.0% |
| !!! | CCAGAATTTTTGTTTATAAA+TGG | + | chr6_4:44163505-44163524 | Msa0988990:intron | 20.0% |
| !!! | TTTATATCCCATTATTTTAC+TGG | + | chr6_4:44163780-44163799 | Msa0988990:intron | 20.0% |
| !!! | GACTTTTATAATCACATTTA+AGG | + | chr6_4:44163860-44163879 | Msa0988990:intron | 20.0% |
| !! | TGTAAATCTTAAAATTAGTC+TGG | - | chr6_4:44164064-44164083 | None:intergenic | 20.0% |
| !! | ACAACCATTATTAATTACTT+CGG | + | chr6_4:44164456-44164475 | Msa0988990:CDS | 20.0% |
| !!! | ATTCTCACTTTTATGATATT+GGG | + | chr6_4:44164613-44164632 | Msa0988990:intron | 20.0% |
| !! | TTTCATGCTTAAATATGTAA+TGG | + | chr6_4:44164900-44164919 | Msa0988990:CDS | 20.0% |
| !! | TTACAGCATAAACATAATTA+TGG | - | chr6_4:44165223-44165242 | None:intergenic | 20.0% |
| !! | CAATAGAAAATAATCTCTAT+AGG | - | chr6_4:44165322-44165341 | None:intergenic | 20.0% |
| !!! | CTATAGAGATTATTTTCTAT+TGG | + | chr6_4:44165320-44165339 | Msa0988990:intron | 20.0% |
| !! | GCGTAAAATCTTAAAATATA+AGG | - | chr6_4:44165527-44165546 | None:intergenic | 20.0% |
| !!! | TTTGAAATTTCAATAGATTG+AGG | + | chr6_4:44165687-44165706 | Msa0988990:intron | 20.0% |
| !! | TTGAAATTTCAATAGATTGA+GGG | + | chr6_4:44165688-44165707 | Msa0988990:intron | 20.0% |
| !! | TTTCATTATTGTGATTGATA+TGG | + | chr6_4:44165766-44165785 | Msa0988990:intron | 20.0% |
| ! | CAAAAATAATTGAGATCGAA+TGG | - | chr6_4:44158739-44158758 | None:intergenic | 25.0% |
| !! | ATATTTGCAGATTCATGTTT+TGG | + | chr6_4:44158982-44159001 | Msa0988990:intron | 25.0% |
| !!! | GAGACCCTTTTTATTTTTAT+TGG | + | chr6_4:44159223-44159242 | Msa0988990:intron | 25.0% |
| ! | TGGTTAATAAGTTTCAGTTA+AGG | - | chr6_4:44159350-44159369 | None:intergenic | 25.0% |
| !!! | CATTTTTTTTCTTTCTGAAC+TGG | + | chr6_4:44159946-44159965 | Msa0988990:intron | 25.0% |
| !!! | TGTGTTTTGAATGATTGAAA+TGG | + | chr6_4:44160548-44160567 | Msa0988990:intron | 25.0% |
| !!! | GAGACCCTTTTTATTTTTAT+TGG | + | chr6_4:44159223-44159242 | Msa0988990:intron | 25.0% |
| !!! | TGAAAAAAGCATTTTTTGAG+AGG | + | chr6_4:44160841-44160860 | Msa0988990:intron | 25.0% |
| ! | TGAAATCATAGAACTCAAAT+TGG | + | chr6_4:44161429-44161448 | Msa0988990:intron | 25.0% |
| ! | TCTATAAGATTCTCTTAGTT+CGG | - | chr6_4:44161707-44161726 | None:intergenic | 25.0% |
| ! | TAAACACATTCATGTAAAAG+TGG | + | chr6_4:44162308-44162327 | Msa0988990:intron | 25.0% |
| ! | AAACACATTCATGTAAAAGT+GGG | + | chr6_4:44162309-44162328 | Msa0988990:intron | 25.0% |
| ! | GTTCTCAAGAAGAATTTATT+TGG | - | chr6_4:44162419-44162438 | None:intergenic | 25.0% |
| !!! | TGAATTGATTTTGACATGTT+TGG | - | chr6_4:44162444-44162463 | None:intergenic | 25.0% |
| !! | TTAATGCATGCTTTATTAAC+TGG | + | chr6_4:44162523-44162542 | Msa0988990:intron | 25.0% |
| ! | CATATGATGTTCATTCAATA+TGG | + | chr6_4:44163010-44163029 | Msa0988990:CDS | 25.0% |
| !! | TAAATGAGGTGTCTTATTAA+GGG | - | chr6_4:44163202-44163221 | None:intergenic | 25.0% |
| !! | TTAAATGAGGTGTCTTATTA+AGG | - | chr6_4:44163203-44163222 | None:intergenic | 25.0% |
| !!! | CCTTTTTCAAAATTCCAATT+GGG | - | chr6_4:44163248-44163267 | None:intergenic | 25.0% |
| !!! | TCCTTTTTCAAAATTCCAAT+TGG | - | chr6_4:44163249-44163268 | None:intergenic | 25.0% |
| ! | TTTGAAAAAGGATAAAAGAG+AGG | + | chr6_4:44163257-44163276 | Msa0988990:intron | 25.0% |
| ! | AATCTGAAAATGGCATATTA+GGG | - | chr6_4:44163476-44163495 | None:intergenic | 25.0% |
| ! | AAATCTGAAAATGGCATATT+AGG | - | chr6_4:44163477-44163496 | None:intergenic | 25.0% |
| ! | TTGTTTATAAATGGCCTATT+AGG | + | chr6_4:44163514-44163533 | Msa0988990:intron | 25.0% |
| ! | TGTTTATAAATGGCCTATTA+GGG | + | chr6_4:44163515-44163534 | Msa0988990:intron | 25.0% |
| ! | GATATAAAATCTATGTACCA+CGG | - | chr6_4:44163768-44163787 | None:intergenic | 25.0% |
| ! | TCATGTACCAGTAAAATAAT+GGG | - | chr6_4:44163790-44163809 | None:intergenic | 25.0% |
| ! | TTCATGTACCAGTAAAATAA+TGG | - | chr6_4:44163791-44163810 | None:intergenic | 25.0% |
| !! | TGTTTTCAGCAACATAAAAA+AGG | - | chr6_4:44163886-44163905 | None:intergenic | 25.0% |
| ! | AAACAATAATCAACATGTAG+AGG | - | chr6_4:44164244-44164263 | None:intergenic | 25.0% |
| ! | TAAGATGATGTAATCATACA+AGG | - | chr6_4:44164287-44164306 | None:intergenic | 25.0% |
| ! | GAATCATAGAACTCAAAAAA+AGG | - | chr6_4:44164343-44164362 | None:intergenic | 25.0% |
| ! | TCATCCGAAGTAATTAATAA+TGG | - | chr6_4:44164463-44164482 | None:intergenic | 25.0% |
| ! | ATTAATTACTTCGGATGATA+AGG | + | chr6_4:44164465-44164484 | Msa0988990:CDS | 25.0% |
| !!! | CATTCTCACTTTTATGATAT+TGG | + | chr6_4:44164612-44164631 | Msa0988990:intron | 25.0% |
| !!! | ACCATTTTTGAATTGATTAC+TGG | + | chr6_4:44164680-44164699 | Msa0988990:intron | 25.0% |
| ! | ACCAGTAATCAATTCAAAAA+TGG | - | chr6_4:44164684-44164703 | None:intergenic | 25.0% |
| !!! | GTGTGCTGATTATTTATTTT+AGG | + | chr6_4:44164711-44164730 | Msa0988990:intron | 25.0% |
| !!! | ATTATTTTCTATTGGTCTGA+GGG | + | chr6_4:44165328-44165347 | Msa0988990:intron | 25.0% |
| !! | TCATATTTTCTATCTGTTGT+AGG | + | chr6_4:44165352-44165371 | Msa0988990:intron | 25.0% |
| !!! | AGTTATTGGTTTCACTTATT+GGG | - | chr6_4:44165592-44165611 | None:intergenic | 25.0% |
| !!! | TAGTTATTGGTTTCACTTAT+TGG | - | chr6_4:44165593-44165612 | None:intergenic | 25.0% |
| ! | AAACCAATAACTATTAGTGA+TGG | + | chr6_4:44165600-44165619 | Msa0988990:intron | 25.0% |
| ! | GTTAAAATGATACTGTAGTT+AGG | + | chr6_4:44165788-44165807 | Msa0988990:intron | 25.0% |
| ! | AAATCAGTATAAGGAATTGT+AGG | - | chr6_4:44166112-44166131 | None:intergenic | 25.0% |
| ! | ATAGGATAGAAATCAGTATA+AGG | - | chr6_4:44166121-44166140 | None:intergenic | 25.0% |
| !!! | TCTTTTTCAATCAAGTCTTA+TGG | + | chr6_4:44166168-44166187 | Msa0988990:three_prime_UTR | 25.0% |
| !!! | ATCTAGGTTGTTATTTATGT+AGG | + | chr6_4:44166212-44166231 | Msa0988990:three_prime_UTR | 25.0% |
| !!! | CAATGTGAATTTTGGTAAAA+TGG | + | chr6_4:44166241-44166260 | Msa0988990:three_prime_UTR | 25.0% |
| !! | TCATCCTTTTTGATATAGTT+AGG | + | chr6_4:44166339-44166358 | Msa0988990:three_prime_UTR | 25.0% |
| !! | CATCCTTTTTGATATAGTTA+GGG | + | chr6_4:44166340-44166359 | Msa0988990:three_prime_UTR | 25.0% |
| ! | TAACCCTAACTATATCAAAA+AGG | - | chr6_4:44166346-44166365 | None:intergenic | 25.0% |
| !! | TTTTTGATATAGTTAGGGTT+AGG | + | chr6_4:44166345-44166364 | Msa0988990:three_prime_UTR | 25.0% |
| !!! | TTTTGTTTTGTTATCTCAAC+TGG | + | chr6_4:44166423-44166442 | Msa0988990:three_prime_UTR | 25.0% |
| ! | ATTTAAAACCAATCCGAAAG+TGG | + | chr6_4:44158659-44158678 | Msa0988990:five_prime_UTR | 30.0% |
| !!! | CTTATTTTGAAACTGGTATC+TGG | + | chr6_4:44158856-44158875 | Msa0988990:intron | 30.0% |
| TGTCTTTAAATTGGTCCATT+CGG | - | chr6_4:44158899-44158918 | None:intergenic | 30.0% | |
| CCAAAAAACAACACTTACAA+AGG | - | chr6_4:44159083-44159102 | None:intergenic | 30.0% | |
| !!! | CCTTTGTAAGTGTTGTTTTT+TGG | + | chr6_4:44159080-44159099 | Msa0988990:intron | 30.0% |
| !!! | TTTTATTGGTCTTAACTCTC+CGG | + | chr6_4:44159237-44159256 | Msa0988990:intron | 30.0% |
| AGAAAGGGACTATAGTAAAT+CGG | + | chr6_4:44159267-44159286 | Msa0988990:intron | 30.0% | |
| !!! | TTGAGAGTCCTTTTTTCAAT+TGG | + | chr6_4:44159375-44159394 | Msa0988990:intron | 30.0% |
| TAAAGTTGTTGTCATGTGAT+TGG | + | chr6_4:44159442-44159461 | Msa0988990:intron | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | + | chr6_4:44159492-44159511 | Msa0988990:intron | 30.0% | |
| ! | TTTGAGAGACCCTTTTTAAT+TGG | + | chr6_4:44159637-44159656 | Msa0988990:intron | 30.0% |
| !! | GACCCTTTTTAATTGGTTAT+TGG | + | chr6_4:44159644-44159663 | Msa0988990:intron | 30.0% |
| ! | ATACCACGTTTTTCTTCTTT+CGG | - | chr6_4:44160108-44160127 | None:intergenic | 30.0% |
| !!! | CTTATTTTGAAACTGGTATC+TGG | + | chr6_4:44158856-44158875 | Msa0988990:intron | 30.0% |
| !! | TTTGCAGATTCATATTTTGG+AGG | + | chr6_4:44160397-44160416 | Msa0988990:intron | 30.0% |
| CCAACAAATAACACTTACAA+AGG | - | chr6_4:44160495-44160514 | None:intergenic | 30.0% | |
| !! | CCTTTGTAAGTGTTATTTGT+TGG | + | chr6_4:44160492-44160511 | Msa0988990:intron | 30.0% |
| TTCACTTAAGATTTGAATCC+AGG | - | chr6_4:44160744-44160763 | None:intergenic | 30.0% | |
| !! | GACCCTTTTTAATTGGTTAT+TGG | + | chr6_4:44159644-44159663 | Msa0988990:intron | 30.0% |
| TGGTTAATGAGTTTCAGTTA+AGG | - | chr6_4:44160969-44160988 | None:intergenic | 30.0% | |
| ! | GTTTGAGAGACCTTTTTAAT+TGG | + | chr6_4:44161010-44161029 | Msa0988990:intron | 30.0% |
| !!! | AAGCATTTTTTGATGATTGC+AGG | + | chr6_4:44161062-44161081 | Msa0988990:intron | 30.0% |
| AAGATAGACAGATTCAAGAA+TGG | + | chr6_4:44161115-44161134 | Msa0988990:CDS | 30.0% | |
| ATATGCTCAACAAATTCAAC+AGG | + | chr6_4:44161304-44161323 | Msa0988990:CDS | 30.0% | |
| TATGCTCAACAAATTCAACA+GGG | + | chr6_4:44161305-44161324 | Msa0988990:CDS | 30.0% | |
| ! | CATCATAAAGCATTCAACAA+AGG | - | chr6_4:44161399-44161418 | None:intergenic | 30.0% |
| ! | AGAAATGCATAATGATTTGC+AGG | + | chr6_4:44161657-44161676 | Msa0988990:CDS | 30.0% |
| AGAGAATCTTATAGAACAGT+TGG | + | chr6_4:44161712-44161731 | Msa0988990:CDS | 30.0% | |
| TAATCTCTACGAAATAGAGT+AGG | - | chr6_4:44161753-44161772 | None:intergenic | 30.0% | |
| TGAAGGATATGCAATTTGTA+GGG | + | chr6_4:44162016-44162035 | Msa0988990:intron | 30.0% | |
| ATATGCAATTTGTAGGGAAT+AGG | + | chr6_4:44162022-44162041 | Msa0988990:intron | 30.0% | |
| !! | AAAACAAGATTGGTGTTTTG+AGG | - | chr6_4:44162167-44162186 | None:intergenic | 30.0% |
| ! | TGGGTTGAACAAAAAAATTG+AGG | + | chr6_4:44162328-44162347 | Msa0988990:intron | 30.0% |
| GGCTAAAAATGAATTGTAGA+AGG | + | chr6_4:44162349-44162368 | Msa0988990:intron | 30.0% | |
| CAAAATCAATTCAACACTTC+TGG | + | chr6_4:44162451-44162470 | Msa0988990:intron | 30.0% | |
| !! | AACACTTCTGGAATCAATTT+GGG | + | chr6_4:44162463-44162482 | Msa0988990:intron | 30.0% |
| ! | CATGCTTTATTAACTGGATA+AGG | + | chr6_4:44162529-44162548 | Msa0988990:intron | 30.0% |
| GATTATGCATCATCTTTACT+TGG | + | chr6_4:44162572-44162591 | Msa0988990:intron | 30.0% | |
| !!! | CTTTACTTGGTTTTATATGC+AGG | + | chr6_4:44162585-44162604 | Msa0988990:intron | 30.0% |
| !! | GTTAAGAAAGTTTGTTGAGT+TGG | - | chr6_4:44162653-44162672 | None:intergenic | 30.0% |
| TCAATATGGATTCTCTTACT+CGG | + | chr6_4:44163024-44163043 | Msa0988990:CDS | 30.0% | |
| TATGTTCATCAAGTAATGAC+AGG | - | chr6_4:44163096-44163115 | None:intergenic | 30.0% | |
| ACCTCATTTAATTAACTCCA+AGG | + | chr6_4:44163212-44163231 | Msa0988990:intron | 30.0% | |
| TCCTTGGAGTTAATTAAATG+AGG | - | chr6_4:44163216-44163235 | None:intergenic | 30.0% | |
| TTCAAAATTCCAATTGGGAT+GGG | - | chr6_4:44163243-44163262 | None:intergenic | 30.0% | |
| TTTCAAAATTCCAATTGGGA+TGG | - | chr6_4:44163244-44163263 | None:intergenic | 30.0% | |
| !! | CCCAATTGGAATTTTGAAAA+AGG | + | chr6_4:44163245-44163264 | Msa0988990:intron | 30.0% |
| TAAAAGAGAGGTTTCAAAAC+AGG | + | chr6_4:44163269-44163288 | Msa0988990:intron | 30.0% | |
| ACACGTTGATGTTGATATTA+GGG | + | chr6_4:44163343-44163362 | Msa0988990:intron | 30.0% | |
| TCCAAACCAAAAATTTCCTA+GGG | - | chr6_4:44163578-44163597 | None:intergenic | 30.0% | |
| TTCCAAACCAAAAATTTCCT+AGG | - | chr6_4:44163416-44163435 | None:intergenic | 30.0% | |
| !!! | GGAAATTTTTGGTTTGGAAT+AGG | + | chr6_4:44163417-44163436 | Msa0988990:intron | 30.0% |
| GTTTATAAATGGCCTATTAG+GGG | + | chr6_4:44163516-44163535 | Msa0988990:intron | 30.0% | |
| TTTATAAATGGCCTATTAGG+GGG | + | chr6_4:44163517-44163536 | Msa0988990:intron | 30.0% | |
| ATCCAAACCAAAAATTTCCT+AGG | + | chr6_4:44163577-44163596 | Msa0988990:intron | 30.0% | |
| TCCAAACCAAAAATTTCCTA+GGG | + | chr6_4:44163578-44163597 | Msa0988990:intron | 30.0% | |
| TTTAATCAAAATACCTTGCC+TGG | + | chr6_4:44164092-44164111 | Msa0988990:CDS | 30.0% | |
| TTAATCAAAATACCTTGCCT+GGG | + | chr6_4:44164093-44164112 | Msa0988990:CDS | 30.0% | |
| TGGTATATCTAGTATGGTTA+TGG | + | chr6_4:44164138-44164157 | Msa0988990:CDS | 30.0% | |
| ATACCAACATTTGACTGATT+TGG | - | chr6_4:44164209-44164228 | None:intergenic | 30.0% | |
| AGATGATGTTCTGTTTCATT+CGG | + | chr6_4:44164306-44164325 | Msa0988990:intron | 30.0% | |
| TAAATAATCAGCACACTGAA+GGG | - | chr6_4:44164707-44164726 | None:intergenic | 30.0% | |
| ATAAATAATCAGCACACTGA+AGG | - | chr6_4:44164708-44164727 | None:intergenic | 30.0% | |
| TAAAATTCACCATGTTCCAA+TGG | + | chr6_4:44164793-44164812 | Msa0988990:intron | 30.0% | |
| AAGATGATGATTGGATGAAA+TGG | + | chr6_4:44164816-44164835 | Msa0988990:intron | 30.0% | |
| ! | CTGCAGTTTTTACAAAACTT+CGG | - | chr6_4:44164863-44164882 | None:intergenic | 30.0% |
| TTTCCAACAACAATGTTTAC+AGG | - | chr6_4:44165027-44165046 | None:intergenic | 30.0% | |
| AAATTATAGATCGAGTAGAG+CGG | + | chr6_4:44165137-44165156 | Msa0988990:intron | 30.0% | |
| GATGACAATCAAATGAATCA+GGG | - | chr6_4:44165201-44165220 | None:intergenic | 30.0% | |
| ! | TAGGGTTTTTCTTTTTCCTT+CGG | - | chr6_4:44165303-44165322 | None:intergenic | 30.0% |
| !! | GATTATTTTCTATTGGTCTG+AGG | + | chr6_4:44165327-44165346 | Msa0988990:intron | 30.0% |
| !! | TTATTTTCTATTGGTCTGAG+GGG | + | chr6_4:44165329-44165348 | Msa0988990:intron | 30.0% |
| TCTGTTGACATCAGAAATAA+TGG | + | chr6_4:44165380-44165399 | Msa0988990:CDS | 30.0% | |
| ! | TCAGAAATAATGGTTTGCAT+TGG | + | chr6_4:44165390-44165409 | Msa0988990:CDS | 30.0% |
| TACGCCAGATTATATTGTAT+AGG | + | chr6_4:44165542-44165561 | Msa0988990:intron | 30.0% | |
| TGCACCTATACAATATAATC+TGG | - | chr6_4:44165549-44165568 | None:intergenic | 30.0% | |
| !! | GACAATATATCGTTGATTCT+AGG | + | chr6_4:44165868-44165887 | Msa0988990:intron | 30.0% |
| !! | ATTACATTGGCTGGATTTTT+GGG | + | chr6_4:44166009-44166028 | Msa0988990:CDS | 30.0% |
| !! | ATACTGATTTCTATCCTATG+AGG | + | chr6_4:44166122-44166141 | Msa0988990:exon | 30.0% |
| !! | GAACATTTGGAAAAGTATCT+AGG | + | chr6_4:44166196-44166215 | Msa0988990:three_prime_UTR | 30.0% |
| !! | GGTTGTTTCAATGTGAATTT+TGG | + | chr6_4:44166233-44166252 | Msa0988990:three_prime_UTR | 30.0% |
| GATGTAAATGAATTGATGCT+GGG | + | chr6_4:44166378-44166397 | Msa0988990:three_prime_UTR | 30.0% | |
| ! | GAACTAAGAGTTAAGGTATT+TGG | + | chr6_4:44166449-44166468 | Msa0988990:three_prime_UTR | 30.0% |
| TCATATTCAAATACAGGCAA+AGG | + | chr6_4:44166477-44166496 | Msa0988990:three_prime_UTR | 30.0% | |
| TAGGAACAGAAAACCACTTT+CGG | - | chr6_4:44158675-44158694 | None:intergenic | 35.0% | |
| AATGGAACAGTCATACATAC+CGG | - | chr6_4:44158721-44158740 | None:intergenic | 35.0% | |
| GCTTCACTCTGTCTTTAAAT+TGG | - | chr6_4:44158908-44158927 | None:intergenic | 35.0% | |
| !! | AGACAGAGTGAAGCTTTAAA+TGG | + | chr6_4:44158914-44158933 | Msa0988990:intron | 35.0% |
| !! | TTTGCAGATTCATGTTTTGG+AGG | + | chr6_4:44158985-44159004 | Msa0988990:intron | 35.0% |
| ! | TCAGACTTTATTTACATCCC+AGG | - | chr6_4:44159299-44159318 | None:intergenic | 35.0% |
| TTCAGTTAAGGTTTGAATCC+AGG | - | chr6_4:44159338-44159357 | None:intergenic | 35.0% | |
| AAAAAGGACTCTCAATCAAG+TGG | - | chr6_4:44159370-44159389 | None:intergenic | 35.0% | |
| ! | TTTACTTTAAGGGGTAACCT+TGG | + | chr6_4:44159410-44159429 | Msa0988990:intron | 35.0% |
| TCACATGACAACAACTTTAC+CGG | - | chr6_4:44159441-44159460 | None:intergenic | 35.0% | |
| CAACCTCTTGTGTAAAAAAC+AGG | + | chr6_4:44159491-44159510 | Msa0988990:intron | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr6_4:44159497-44159516 | None:intergenic | 35.0% |
| CTTGTGTAAAAAACAGGGTA+AGG | + | chr6_4:44159497-44159516 | Msa0988990:intron | 35.0% | |
| ATCAATAAAAAAGGGCAACC+TGG | - | chr6_4:44159588-44159607 | None:intergenic | 35.0% | |
| !!! | TGAGAAAAGCATTTTTTGCG+AGG | + | chr6_4:44159683-44159702 | Msa0988990:intron | 35.0% |
| AGACTGTACTTACTTTCAGA+GGG | - | chr6_4:44159738-44159757 | None:intergenic | 35.0% | |
| ! | ACGTTTTTCTTCTTTCGGAT+TGG | - | chr6_4:44160103-44160122 | None:intergenic | 35.0% |
| AATCCGAAAGAAGAAAAACG+TGG | + | chr6_4:44160102-44160121 | Msa0988990:intron | 35.0% | |
| !! | CATATTTTGGAGGATCAAAG+TGG | + | chr6_4:44160407-44160426 | Msa0988990:intron | 35.0% |
| !!! | TTTTATTGGTCTTGACTCTC+CGG | + | chr6_4:44160643-44160662 | Msa0988990:intron | 35.0% |
| TCAGACATTATTTACCTCTC+AGG | - | chr6_4:44160705-44160724 | None:intergenic | 35.0% | |
| GACTAATGATTATTCTAGCC+TGG | + | chr6_4:44160723-44160742 | Msa0988990:intron | 35.0% | |
| ! | TGTGAGAGACCCTTTTTAAT+TGG | + | chr6_4:44160795-44160814 | Msa0988990:intron | 35.0% |
| !!! | AAAAGCATTTTTTGAGAGGC+CGG | + | chr6_4:44160845-44160864 | Msa0988990:intron | 35.0% |
| ACCGATGATTATTCTAGTCA+GGG | + | chr6_4:44160917-44160936 | Msa0988990:intron | 35.0% | |
| ACCCTGACTAGAATAATCAT+CGG | - | chr6_4:44160921-44160940 | None:intergenic | 35.0% | |
| TTAAAAAGGTCTCTCAAACC+AGG | - | chr6_4:44161009-44161028 | None:intergenic | 35.0% | |
| ATCTTTCAACTTCTTCCCAA+AGG | - | chr6_4:44161100-44161119 | None:intergenic | 35.0% | |
| ATGCTCAACAAATTCAACAG+GGG | + | chr6_4:44161306-44161325 | Msa0988990:CDS | 35.0% | |
| ! | AATGCATAATGATTTGCAGG+AGG | + | chr6_4:44161660-44161679 | Msa0988990:CDS | 35.0% |
| TTCGTAGAGATTAATGCTGT+TGG | + | chr6_4:44161760-44161779 | Msa0988990:CDS | 35.0% | |
| AAGAAGTTTGATAAGCGCTT+TGG | + | chr6_4:44161799-44161818 | Msa0988990:CDS | 35.0% | |
| ! | AATGAATGAACATCGACTGA+AGG | + | chr6_4:44161999-44162018 | Msa0988990:intron | 35.0% |
| CTGAAGGATATGCAATTTGT+AGG | + | chr6_4:44162015-44162034 | Msa0988990:intron | 35.0% | |
| AGGAAATGAGAGTAAAAACC+TGG | - | chr6_4:44162141-44162160 | None:intergenic | 35.0% | |
| ! | TTTCTTTTCCACTTACTGTG+TGG | + | chr6_4:44162191-44162210 | Msa0988990:intron | 35.0% |
| ATTGAATCTGGCTAAAACTG+AGG | + | chr6_4:44162263-44162282 | Msa0988990:intron | 35.0% | |
| !! | CAACACTTCTGGAATCAATT+TGG | + | chr6_4:44162462-44162481 | Msa0988990:intron | 35.0% |
| GCATTTATCTTATCAACCAC+AGG | - | chr6_4:44162613-44162632 | None:intergenic | 35.0% | |
| AGATAAATGCAGCTGTTGAT+AGG | + | chr6_4:44162623-44162642 | Msa0988990:CDS | 35.0% | |
| TCAGCAGAAGAGACATAAAA+TGG | - | chr6_4:44162753-44162772 | None:intergenic | 35.0% | |
| !!! | CTTCTGTGTATTTTAGTGCA+TGG | + | chr6_4:44162911-44162930 | Msa0988990:CDS | 35.0% |
| GGTCGAACAAATCATACTTT+AGG | + | chr6_4:44162932-44162951 | Msa0988990:CDS | 35.0% | |
| GACACGTTGATGTTGATATT+AGG | + | chr6_4:44163342-44163361 | Msa0988990:intron | 35.0% | |
| ! | GAAATGGCATATTTTACAGG+GGG | - | chr6_4:44163383-44163402 | None:intergenic | 35.0% |
| ! | GGAAATGGCATATTTTACAG+GGG | - | chr6_4:44163384-44163403 | None:intergenic | 35.0% |
| ! | CGGAAATGGCATATTTTACA+GGG | - | chr6_4:44163385-44163404 | None:intergenic | 35.0% |
| ! | CCTGTAAAATATGCCATTTC+CGG | + | chr6_4:44163383-44163402 | Msa0988990:intron | 35.0% |
| ! | TTTACCCCCTAGGAAATTTT+TGG | + | chr6_4:44163406-44163425 | Msa0988990:intron | 35.0% |
| CAAACCAAAAATTTCCTAGG+GGG | - | chr6_4:44163580-44163599 | None:intergenic | 35.0% | |
| CCAAACCAAAAATTTCCTAG+GGG | - | chr6_4:44163579-44163598 | None:intergenic | 35.0% | |
| TTATAAATGGCCTATTAGGG+GGG | + | chr6_4:44163518-44163537 | Msa0988990:intron | 35.0% | |
| !!! | TCCCTAGGAAATTTTTGGTT+TGG | - | chr6_4:44163582-44163601 | None:intergenic | 35.0% |
| AAACCAAAAATTTCCTAGGG+AGG | + | chr6_4:44163581-44163600 | Msa0988990:intron | 35.0% | |
| ! | TTACCTCCCTAGGAAATTTT+TGG | - | chr6_4:44163587-44163606 | None:intergenic | 35.0% |
| ! | CCTGAAAAATAGGCTATTTC+CGG | - | chr6_4:44163611-44163630 | None:intergenic | 35.0% |
| !! | CGGAAATAGCCTATTTTTCA+GGG | + | chr6_4:44163609-44163628 | Msa0988990:intron | 35.0% |
| !! | GGAAATAGCCTATTTTTCAG+GGG | + | chr6_4:44163610-44163629 | Msa0988990:intron | 35.0% |
| !!! | GAAATAGCCTATTTTTCAGG+GGG | + | chr6_4:44163611-44163630 | Msa0988990:intron | 35.0% |
| !!! | AAATAGCCTATTTTTCAGGG+GGG | + | chr6_4:44163612-44163631 | Msa0988990:intron | 35.0% |
| CATACATAGATCAGTGCATT+TGG | - | chr6_4:44163841-44163860 | None:intergenic | 35.0% | |
| !! | ACTTGATTGCTTTTGCAGAT+TGG | + | chr6_4:44163905-44163924 | Msa0988990:intron | 35.0% |
| !! | CTTGATTGCTTTTGCAGATT+GGG | + | chr6_4:44163906-44163925 | Msa0988990:intron | 35.0% |
| CACAATCACTTATATAACGC+CGG | - | chr6_4:44163950-44163969 | None:intergenic | 35.0% | |
| ! | ATGGTTATGGATCTCTTTTC+AGG | + | chr6_4:44164151-44164170 | Msa0988990:CDS | 35.0% |
| TTCTCTTCAGCAAAATGAGA+AGG | - | chr6_4:44164179-44164198 | None:intergenic | 35.0% | |
| ACACCAAATCAGTCAAATGT+TGG | + | chr6_4:44164203-44164222 | Msa0988990:CDS | 35.0% | |
| CCTCACTATCATCATAATCT+TGG | - | chr6_4:44164507-44164526 | None:intergenic | 35.0% | |
| ! | CCAAGATTATGATGATAGTG+AGG | + | chr6_4:44164504-44164523 | Msa0988990:CDS | 35.0% |
| ! | AAACCTTTACAGAAGGTGTA+AGG | - | chr6_4:44164585-44164604 | None:intergenic | 35.0% |
| AGTTCACAAACCTTTACAGA+AGG | - | chr6_4:44164592-44164611 | None:intergenic | 35.0% | |
| TTCCAATGGAAGATGATGAT+TGG | + | chr6_4:44164807-44164826 | Msa0988990:intron | 35.0% | |
| ATCCAATCATCATCTTCCAT+TGG | - | chr6_4:44164812-44164831 | None:intergenic | 35.0% | |
| ! | GTTTTTACAAAACTTCGGTC+AGG | - | chr6_4:44164858-44164877 | None:intergenic | 35.0% |
| !! | CGAAGTTTTGTAAAAACTGC+AGG | + | chr6_4:44164861-44164880 | Msa0988990:intron | 35.0% |
| TCACAACATACTACTTCAAC+TGG | + | chr6_4:44164950-44164969 | Msa0988990:CDS | 35.0% | |
| CTTCCTGTAAACATTGTTGT+TGG | + | chr6_4:44165021-44165040 | Msa0988990:intron | 35.0% | |
| CTACATAAGCAACATGTTTG+AGG | + | chr6_4:44165047-44165066 | Msa0988990:intron | 35.0% | |
| GGATGACAATCAAATGAATC+AGG | - | chr6_4:44165202-44165221 | None:intergenic | 35.0% | |
| !!! | TTCGGTTTTTTAGCAAGCAT+TGG | - | chr6_4:44165285-44165304 | None:intergenic | 35.0% |
| ! | AATGCTTGCTAAAAAACCGA+AGG | + | chr6_4:44165284-44165303 | Msa0988990:intron | 35.0% |
| CAGAATACGGAAAGATTACA+TGG | - | chr6_4:44165431-44165450 | None:intergenic | 35.0% | |
| CTTCAGCAGAAACAAATAGA+AGG | - | chr6_4:44165479-44165498 | None:intergenic | 35.0% | |
| !! | ATTTGTTTCTGCTGAAGTAC+TGG | + | chr6_4:44165482-44165501 | Msa0988990:CDS | 35.0% |
| GGTCCATCACTAATAGTTAT+TGG | - | chr6_4:44165606-44165625 | None:intergenic | 35.0% | |
| AATAGATTGAGGGACTATTG+TGG | + | chr6_4:44165698-44165717 | Msa0988990:intron | 35.0% | |
| !!! | TTTTTCTGGCTTTTCTTGAG+TGG | + | chr6_4:44165835-44165854 | Msa0988990:intron | 35.0% |
| CAAAAATCCAGCCAATGTAA+TGG | - | chr6_4:44166010-44166029 | None:intergenic | 35.0% | |
| !! | CATTACATTGGCTGGATTTT+TGG | + | chr6_4:44166008-44166027 | Msa0988990:CDS | 35.0% |
| AATACTGAAATGACGAGTGA+AGG | - | chr6_4:44166066-44166085 | None:intergenic | 35.0% | |
| TAAGGAATTGTAGGTATAGC+AGG | - | chr6_4:44166103-44166122 | None:intergenic | 35.0% | |
| GGATGTAAATGAATTGATGC+TGG | + | chr6_4:44166377-44166396 | Msa0988990:three_prime_UTR | 35.0% | |
| ! | CTGGTTTGAACTAAGAGTTA+AGG | + | chr6_4:44166442-44166461 | Msa0988990:three_prime_UTR | 35.0% |
| ! | CTAAGAGTTAAGGTATTTGG+AGG | + | chr6_4:44166452-44166471 | Msa0988990:three_prime_UTR | 35.0% |
| GAGGTCTCATATTCAAATAC+AGG | + | chr6_4:44166471-44166490 | Msa0988990:three_prime_UTR | 35.0% | |
| TTGTTGTCACATGCTATGCT+CGG | + | chr6_4:44158507-44158526 | Msa0988990:intron | 40.0% | |
| ACAGAAAACCACTTTCGGAT+TGG | - | chr6_4:44158670-44158689 | None:intergenic | 40.0% | |
| !! | ATTGGTCCATTCGGATTAGT+CGG | - | chr6_4:44158890-44158909 | None:intergenic | 40.0% |
| !!! | CATGTTTTGGAGGTACAAAG+TGG | + | chr6_4:44158995-44159014 | Msa0988990:five_prime_UTR | 40.0% |
| TAGTCCCTTTCTGCATAAAC+CGG | - | chr6_4:44159259-44159278 | None:intergenic | 40.0% | |
| ATAGTAAATCGGAGTTCTCC+TGG | + | chr6_4:44159278-44159297 | Msa0988990:intron | 40.0% | |
| TAGTAAATCGGAGTTCTCCT+GGG | + | chr6_4:44159279-44159298 | Msa0988990:intron | 40.0% | |
| ! | GACTACTGATTATTCTTGCC+TGG | + | chr6_4:44159317-44159336 | Msa0988990:intron | 40.0% |
| GTTGTTGTCATGTGATTGGA+AGG | + | chr6_4:44159446-44159465 | Msa0988990:intron | 40.0% | |
| ! | TTACACAAGAGGTTGTTTCC+AGG | - | chr6_4:44159486-44159505 | None:intergenic | 40.0% |
| CGTACAATACACCAAATGGT+GGG | + | chr6_4:44159523-44159542 | Msa0988990:intron | 40.0% | |
| CAGACTGTACTTACTTTCAG+AGG | - | chr6_4:44159739-44159758 | None:intergenic | 40.0% | |
| ACTCTGAATACTCCACTCAT+TGG | - | chr6_4:44159763-44159782 | None:intergenic | 40.0% | |
| TTGTTGTCACATGCTATGCT+CGG | + | chr6_4:44158507-44158526 | Msa0988990:intron | 40.0% | |
| !! | TGGCTTTAAATTGGTCCCTT+CGG | - | chr6_4:44160311-44160330 | None:intergenic | 40.0% |
| !! | GCTTCACTCTGGCTTTAAAT+TGG | - | chr6_4:44160320-44160339 | None:intergenic | 40.0% |
| TGTTAAACTGGAGTTCTCTC+AGG | + | chr6_4:44160878-44160897 | Msa0988990:intron | 40.0% | |
| GACCGATGATTATTCTAGTC+AGG | + | chr6_4:44160916-44160935 | Msa0988990:intron | 40.0% | |
| TTCTAGTCAGGGTTCGAAAA+AGG | + | chr6_4:44160928-44160947 | Msa0988990:intron | 40.0% | |
| ! | TTGATGATTGCAGGAAGAGA+TGG | + | chr6_4:44161071-44161090 | Msa0988990:intron | 40.0% |
| AGACAGATTCAAGAATGGCA+AGG | + | chr6_4:44161120-44161139 | Msa0988990:CDS | 40.0% | |
| GACAGATTCAAGAATGGCAA+GGG | + | chr6_4:44161121-44161140 | Msa0988990:CDS | 40.0% | |
| ! | TGTTTGCTCTTGTGTTGTTG+AGG | + | chr6_4:44161153-44161172 | Msa0988990:intron | 40.0% |
| ! | GTTTGCTCTTGTGTTGTTGA+GGG | + | chr6_4:44161154-44161173 | Msa0988990:intron | 40.0% |
| CAAGGATTTCTCACGAATGT+TGG | + | chr6_4:44161352-44161371 | Msa0988990:CDS | 40.0% | |
| CTCACGAATGTTGGATAATC+AGG | + | chr6_4:44161361-44161380 | Msa0988990:CDS | 40.0% | |
| GAAGATTGTCCTATTCCTGT+TGG | + | chr6_4:44161594-44161613 | Msa0988990:CDS | 40.0% | |
| TATTCCTGTTGGAGCAACAA+GGG | + | chr6_4:44161605-44161624 | Msa0988990:CDS | 40.0% | |
| !! | TCGGCTATTTTGTGTATCTC+AGG | - | chr6_4:44161688-44161707 | None:intergenic | 40.0% |
| CTCATGAAGATTGCGAGATA+AGG | - | chr6_4:44162062-44162081 | None:intergenic | 40.0% | |
| CAGGCTGATCGTAAATTGAT+AGG | - | chr6_4:44162108-44162127 | None:intergenic | 40.0% | |
| ATGAGAGTAAAAACCTGGAG+AGG | - | chr6_4:44162136-44162155 | None:intergenic | 40.0% | |
| !!! | AGATTGGTGTTTTGAGGACA+AGG | - | chr6_4:44162161-44162180 | None:intergenic | 40.0% |
| ! | TTTTCCACTTACTGTGTGGT+TGG | + | chr6_4:44162195-44162214 | Msa0988990:intron | 40.0% |
| ACTGGATAAGGAATAGCACA+AGG | + | chr6_4:44162541-44162560 | Msa0988990:intron | 40.0% | |
| ! | GTTTTATATGCAGGATCCTG+TGG | + | chr6_4:44162594-44162613 | Msa0988990:intron | 40.0% |
| ATCAACATGATCCTCAGAAG+GGG | - | chr6_4:44162719-44162738 | None:intergenic | 40.0% | |
| CATCAACATGATCCTCAGAA+GGG | - | chr6_4:44162720-44162739 | None:intergenic | 40.0% | |
| TCATCAACATGATCCTCAGA+AGG | - | chr6_4:44162721-44162740 | None:intergenic | 40.0% | |
| TATGTCTCTTCTGCTGAACT+TGG | + | chr6_4:44162756-44162775 | Msa0988990:CDS | 40.0% | |
| GTAGAGTAATCATCTGCTGT+AGG | - | chr6_4:44162823-44162842 | None:intergenic | 40.0% | |
| GATGATTACTCTACAAGCCT+TGG | + | chr6_4:44162829-44162848 | Msa0988990:CDS | 40.0% | |
| ATAACAATACCGCAAACCGT+TGG | - | chr6_4:44162862-44162881 | None:intergenic | 40.0% | |
| ACGGTTTGCGGTATTGTTAT+TGG | + | chr6_4:44162862-44162881 | Msa0988990:CDS | 40.0% | |
| ! | CGGTTTGCGGTATTGTTATT+GGG | + | chr6_4:44162863-44162882 | Msa0988990:CDS | 40.0% |
| ! | GGTTTGCGGTATTGTTATTG+GGG | + | chr6_4:44162864-44162883 | Msa0988990:CDS | 40.0% |
| !!! | TTACTCGGTCGTCTTTTTTG+CGG | + | chr6_4:44163039-44163058 | Msa0988990:CDS | 40.0% |
| !! | TAATCTCTGAAGCACGAACA+TGG | + | chr6_4:44163297-44163316 | Msa0988990:intron | 40.0% |
| ! | CCGGAAATGGCATATTTTAC+AGG | - | chr6_4:44163386-44163405 | None:intergenic | 40.0% |
| AAATTTCCTAGGGGGTAAAC+CGG | - | chr6_4:44163405-44163424 | None:intergenic | 40.0% | |
| !!! | CCCCTAGGAAATTTTTGGTT+TGG | + | chr6_4:44163411-44163430 | Msa0988990:intron | 40.0% |
| AATTTCCTAGGGAGGTAAAC+CGG | + | chr6_4:44163589-44163608 | Msa0988990:intron | 40.0% | |
| !! | CCGGAAATAGCCTATTTTTC+AGG | + | chr6_4:44163608-44163627 | Msa0988990:intron | 40.0% |
| ! | GTTTTTCCCCCCTGAAAAAT+AGG | - | chr6_4:44163621-44163640 | None:intergenic | 40.0% |
| TTTGTTAGTGCTAGTGCTCT+CGG | + | chr6_4:44164005-44164024 | Msa0988990:CDS | 40.0% | |
| CTTGGCTGGTATATCTAGTA+TGG | + | chr6_4:44164132-44164151 | Msa0988990:CDS | 40.0% | |
| GACAATGGTGCACTAGAAAA+AGG | + | chr6_4:44164427-44164446 | Msa0988990:CDS | 40.0% | |
| GTATGCCGATCCAATTGAAT+TGG | - | chr6_4:44164557-44164576 | None:intergenic | 40.0% | |
| ! | TTACAGAAGGTGTAAGGAGT+CGG | - | chr6_4:44164579-44164598 | None:intergenic | 40.0% |
| ACTCCTTACACCTTCTGTAA+AGG | + | chr6_4:44164579-44164598 | Msa0988990:CDS | 40.0% | |
| CATCATCTTCCATTGGAACA+TGG | - | chr6_4:44164805-44164824 | None:intergenic | 40.0% | |
| TAAGCAACATGTTTGAGGAC+AGG | + | chr6_4:44165052-44165071 | Msa0988990:intron | 40.0% | |
| ATGTATTGCGGCTCAGAATA+CGG | - | chr6_4:44165444-44165463 | None:intergenic | 40.0% | |
| ACTGACATAGTGCATATTCG+AGG | + | chr6_4:44165659-44165678 | Msa0988990:intron | 40.0% | |
| TGCTGATGCTACCATTACAT+TGG | + | chr6_4:44165996-44166015 | Msa0988990:CDS | 40.0% | |
| AAGGAAGCAAGGTGACATTA+AGG | - | chr6_4:44166047-44166066 | None:intergenic | 40.0% | |
| TCTTTCAATCTGAGCCTCAT+AGG | - | chr6_4:44166139-44166158 | None:intergenic | 40.0% | |
| TATGAGGCTCAGATTGAAAG+AGG | + | chr6_4:44166138-44166157 | Msa0988990:three_prime_UTR | 40.0% | |
| TCTTATGGCTCACGAACATT+TGG | + | chr6_4:44166183-44166202 | Msa0988990:three_prime_UTR | 40.0% | |
| TAAATGAATTGATGCTGGGC+TGG | + | chr6_4:44166382-44166401 | Msa0988990:three_prime_UTR | 40.0% | |
| ! | GTGGTTTTCTGTTCCTAAGC+TGG | + | chr6_4:44158678-44158697 | Msa0988990:five_prime_UTR | 45.0% |
| CTGTTGTGTCTTTCCAGCTT+AGG | - | chr6_4:44158694-44158713 | None:intergenic | 45.0% | |
| GGAAAGACACAACAGAACAC+CGG | + | chr6_4:44158699-44158718 | Msa0988990:five_prime_UTR | 45.0% | |
| ! | TGAAACTGGTATCTGGCTCA+AGG | + | chr6_4:44158863-44158882 | Msa0988990:intron | 45.0% |
| ACTCTCCGGTTTATGCAGAA+AGG | + | chr6_4:44159251-44159270 | Msa0988990:intron | 45.0% | |
| CTCTCCGGTTTATGCAGAAA+GGG | + | chr6_4:44159252-44159271 | Msa0988990:intron | 45.0% | |
| TCATGTGATTGGAAGGTCAC+TGG | + | chr6_4:44159453-44159472 | Msa0988990:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr6_4:44159519-44159538 | Msa0988990:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr6_4:44159522-44159541 | Msa0988990:intron | 45.0% | |
| !!! | ATTTTTTGCGAGGCCAGAGA+GGG | + | chr6_4:44159693-44159712 | Msa0988990:intron | 45.0% |
| AGTACAGTCTGACCAATGAG+TGG | + | chr6_4:44159748-44159767 | Msa0988990:intron | 45.0% | |
| GAAAAGAGAGAGAGAGAGAG+AGG | - | chr6_4:44160028-44160047 | None:intergenic | 45.0% | |
| ! | TGAAACTGGTATCTGGCTCA+AGG | + | chr6_4:44158863-44158882 | Msa0988990:intron | 45.0% |
| !! | ATTGGTCCCTTCGGATTAGT+CGG | - | chr6_4:44160302-44160321 | None:intergenic | 45.0% |
| ! | AGCCAGAGTGAAGCTTTGTA+TGG | + | chr6_4:44160326-44160345 | Msa0988990:intron | 45.0% |
| GTCCATACAAAGCTTCACTC+TGG | - | chr6_4:44160331-44160350 | None:intergenic | 45.0% | |
| GGAAAGGGACTATGGTAAAC+CGG | + | chr6_4:44160673-44160692 | Msa0988990:intron | 45.0% | |
| TTTACCTCTCAGGAGAACTC+CGG | - | chr6_4:44160695-44160714 | None:intergenic | 45.0% | |
| TAAAAAGGGTCTCTCACACG+AGG | - | chr6_4:44160793-44160812 | None:intergenic | 45.0% | |
| !!! | ATTTTTTGAGAGGCCGGAGA+GGG | + | chr6_4:44160851-44160870 | Msa0988990:intron | 45.0% |
| AGTTTAACATGACCCCTCTC+CGG | - | chr6_4:44160867-44160886 | None:intergenic | 45.0% | |
| TAAACTGGAGTTCTCTCAGG+AGG | + | chr6_4:44160881-44160900 | Msa0988990:intron | 45.0% | |
| AGGTAGTTGAGCTGAACAAG+TGG | - | chr6_4:44160989-44161008 | None:intergenic | 45.0% | |
| ACTTGTTCAGCTCAACTACC+TGG | + | chr6_4:44160988-44161007 | Msa0988990:intron | 45.0% | |
| AGGAAGAGATGGTTGCCTTT+GGG | + | chr6_4:44161082-44161101 | Msa0988990:intron | 45.0% | |
| TTCAACAGGGGACACTAGAT+CGG | + | chr6_4:44161318-44161337 | Msa0988990:CDS | 45.0% | |
| CTTGTTGCTCCAACAGGAAT+AGG | - | chr6_4:44161606-44161625 | None:intergenic | 45.0% | |
| CTATTCCTGTTGGAGCAACA+AGG | + | chr6_4:44161604-44161623 | Msa0988990:CDS | 45.0% | |
| ! | CTTGAACACTTGTTGCAGCT+GGG | - | chr6_4:44161875-44161894 | None:intergenic | 45.0% |
| GCAACAAGTGTTCAAGCATG+TGG | + | chr6_4:44161879-44161898 | Msa0988990:CDS | 45.0% | |
| !! | TAGGGAATAGGTGCTGTTGT+GGG | + | chr6_4:44162034-44162053 | Msa0988990:intron | 45.0% |
| TCGCAATCTTCATGAGCTTC+AGG | + | chr6_4:44162066-44162085 | Msa0988990:intron | 45.0% | |
| ATGAGCTTCAGGATCGTCAA+GGG | + | chr6_4:44162077-44162096 | Msa0988990:intron | 45.0% | |
| ACAACCAACCACACAGTAAG+TGG | - | chr6_4:44162202-44162221 | None:intergenic | 45.0% | |
| ! | TTACTGTGTGGTTGGTTGTG+CGG | + | chr6_4:44162203-44162222 | Msa0988990:intron | 45.0% |
| GATAAGGAATAGCACAAGGC+TGG | + | chr6_4:44162545-44162564 | Msa0988990:intron | 45.0% | |
| ! | CGGTATTGTTATTGGGGCAA+TGG | + | chr6_4:44162870-44162889 | Msa0988990:CDS | 45.0% |
| !!! | TACTCGGTCGTCTTTTTTGC+GGG | + | chr6_4:44163040-44163059 | Msa0988990:CDS | 45.0% |
| !! | AATTGGGATGGGCTTTTCCT+TGG | - | chr6_4:44163232-44163251 | None:intergenic | 45.0% |
| AAGGAAAAGCCCATCCCAAT+TGG | + | chr6_4:44163231-44163250 | Msa0988990:intron | 45.0% | |
| CAACATCAACGTGTCAGTGT+CGG | - | chr6_4:44163337-44163356 | None:intergenic | 45.0% | |
| ATCCAGAATACCCCCCTAAT+AGG | - | chr6_4:44163531-44163550 | None:intergenic | 45.0% | |
| TATTTCCGGTTTACCTCCCT+AGG | - | chr6_4:44163597-44163616 | None:intergenic | 45.0% | |
| TGTCAGAGTGTGACACATGT+CGG | + | chr6_4:44163713-44163732 | Msa0988990:intron | 45.0% | |
| ATTCAGATTGAAGCCGTGTC+CGG | - | chr6_4:44163742-44163761 | None:intergenic | 45.0% | |
| ATCAAAATACCTTGCCTGGG+TGG | + | chr6_4:44164096-44164115 | Msa0988990:CDS | 45.0% | |
| TCAAAATACCTTGCCTGGGT+GGG | + | chr6_4:44164097-44164116 | Msa0988990:CDS | 45.0% | |
| GACAATGGTGCAGTAGACAA+TGG | + | chr6_4:44164412-44164431 | Msa0988990:CDS | 45.0% | |
| ATCCAATTGAATTGGCCGGA+AGG | - | chr6_4:44164549-44164568 | None:intergenic | 45.0% | |
| TCCGGCCAATTCAATTGGAT+CGG | + | chr6_4:44164549-44164568 | Msa0988990:CDS | 45.0% | |
| AAGAAAAACCGCAACTGTGC+TGG | - | chr6_4:44164980-44164999 | None:intergenic | 45.0% | |
| ATCGAGTAGAGCGGACAAAT+GGG | + | chr6_4:44165146-44165165 | Msa0988990:intron | 45.0% | |
| TGAGCCGCAATACATCTGTT+CGG | + | chr6_4:44165449-44165468 | Msa0988990:CDS | 45.0% | |
| AGACCCGAACAGATGTATTG+CGG | - | chr6_4:44165456-44165475 | None:intergenic | 45.0% | |
| !! | GTTTCTGCTGAAGTACTGGA+AGG | + | chr6_4:44165486-44165505 | Msa0988990:CDS | 45.0% |
| GGCTACTCGTTACACATTCA+AGG | + | chr6_4:44165719-44165738 | Msa0988990:intron | 45.0% | |
| TTTCACGCGTCATGTCATCA+AGG | + | chr6_4:44165908-44165927 | Msa0988990:CDS | 45.0% | |
| ATGTCATCAAGGCTTTCTCG+CGG | + | chr6_4:44165919-44165938 | Msa0988990:CDS | 45.0% | |
| TCTAGCAATTGTTCCAGCCT+CGG | - | chr6_4:44165971-44165990 | None:intergenic | 45.0% | |
| GATGCTACCATTACATTGGC+TGG | + | chr6_4:44166000-44166019 | Msa0988990:CDS | 45.0% | |
| !!! | CTGGATTTTTGGGTCAGAGT+AGG | + | chr6_4:44166019-44166038 | Msa0988990:CDS | 45.0% |
| AATGACGAGTGAAGGAAGCA+AGG | - | chr6_4:44166058-44166077 | None:intergenic | 45.0% | |
| GTTAGGGTTAGGATGAGTTG+AGG | + | chr6_4:44166356-44166375 | Msa0988990:three_prime_UTR | 45.0% | |
| !!! | ACATTTTTATTTTTTTTAAA+TGG | + | chr6_4:44158484-44158503 | Msa0988990:intron | 5.0% |
| !! | TAAATTAAATCAATAAAAAA+GGG | - | chr6_4:44159596-44159615 | None:intergenic | 5.0% |
| !! | ATCTATATAAATATAAAATA+TGG | - | chr6_4:44159906-44159925 | None:intergenic | 5.0% |
| !!! | TGATTTTTTTTTTTTTTAAA+AGG | - | chr6_4:44163444-44163463 | None:intergenic | 5.0% |
| !!! | ATTTTTTATTTGTTTTTAAA+AGG | + | chr6_4:44163549-44163568 | Msa0988990:intron | 5.0% |
| CAAGGACCGACTAATCCGAA+TGG | + | chr6_4:44158881-44158900 | Msa0988990:intron | 50.0% | |
| TACAAAGTGGTTGCTGCAGC+TGG | + | chr6_4:44159008-44159027 | Msa0988990:five_prime_UTR | 50.0% | |
| !! | AAGGTCACTGGTTCAAGTCC+TGG | + | chr6_4:44159465-44159484 | Msa0988990:intron | 50.0% |
| ACTAAAGCTCTCGCAACGCA+GGG | - | chr6_4:44159562-44159581 | None:intergenic | 50.0% | |
| !!! | CATTTTTTGCGAGGCCAGAG+AGG | + | chr6_4:44159692-44159711 | Msa0988990:intron | 50.0% |
| !!! | TTTTTTGCGAGGCCAGAGAG+GGG | + | chr6_4:44159694-44159713 | Msa0988990:intron | 50.0% |
| AGTTTACCATGACCCCTCTC+TGG | - | chr6_4:44159709-44159728 | None:intergenic | 50.0% | |
| AGAGAGGGGTCATGGTAAAC+TGG | + | chr6_4:44159708-44159727 | Msa0988990:intron | 50.0% | |
| TCAAGGACCGACTAATCCGA+AGG | + | chr6_4:44158880-44158899 | Msa0988990:intron | 50.0% | |
| CAAGGACCGACTAATCCGAA+GGG | + | chr6_4:44158881-44158900 | Msa0988990:intron | 50.0% | |
| ATCAAAGTGGTTGCTGCAGC+TGG | + | chr6_4:44160420-44160439 | Msa0988990:intron | 50.0% | |
| TCTTGACTCTCCGGTTTCTG+CGG | + | chr6_4:44160652-44160671 | Msa0988990:intron | 50.0% | |
| TAGTCCCTTTCCGCAGAAAC+CGG | - | chr6_4:44160665-44160684 | None:intergenic | 50.0% | |
| GTTTCTGCGGAAAGGGACTA+TGG | + | chr6_4:44160665-44160684 | Msa0988990:intron | 50.0% | |
| TAAACCGGAGTTCTCCTGAG+AGG | + | chr6_4:44160688-44160707 | Msa0988990:intron | 50.0% | |
| !!! | CATTTTTTGAGAGGCCGGAG+AGG | + | chr6_4:44160850-44160869 | Msa0988990:intron | 50.0% |
| !!! | TTTTTTGAGAGGCCGGAGAG+GGG | + | chr6_4:44160852-44160871 | Msa0988990:intron | 50.0% |
| GGAGAGGGGTCATGTTAAAC+TGG | + | chr6_4:44160866-44160885 | Msa0988990:intron | 50.0% | |
| CAGGAAGAGATGGTTGCCTT+TGG | + | chr6_4:44161081-44161100 | Msa0988990:intron | 50.0% | |
| AGATCGGCGACATGTTCTCA+AGG | + | chr6_4:44161334-44161353 | Msa0988990:CDS | 50.0% | |
| AAAGCCCTTGTTGCTCCAAC+AGG | - | chr6_4:44161612-44161631 | None:intergenic | 50.0% | |
| ! | GTTGGAGCAACAAGGGCTTT+TGG | + | chr6_4:44161612-44161631 | Msa0988990:CDS | 50.0% |
| ! | AACAAGGGCTTTTGGCAAGC+AGG | + | chr6_4:44161620-44161639 | Msa0988990:CDS | 50.0% |
| GCAAGCAGGATAGCAAAGCT+TGG | + | chr6_4:44161634-44161653 | Msa0988990:CDS | 50.0% | |
| ! | ACTTGTTGCAGCTGGGAGTA+AGG | - | chr6_4:44161868-44161887 | None:intergenic | 50.0% |
| ! | GCTTGAACACTTGTTGCAGC+TGG | - | chr6_4:44161876-44161895 | None:intergenic | 50.0% |
| !! | GTAGGGAATAGGTGCTGTTG+TGG | + | chr6_4:44162033-44162052 | Msa0988990:intron | 50.0% |
| CATGAGCTTCAGGATCGTCA+AGG | + | chr6_4:44162076-44162095 | Msa0988990:intron | 50.0% | |
| AAAACCTGGAGAGGAAGAGC+AGG | - | chr6_4:44162127-44162146 | None:intergenic | 50.0% | |
| ACATGATCCTCAGAAGGGGT+AGG | - | chr6_4:44162715-44162734 | None:intergenic | 50.0% | |
| ! | AGCAGCGTGGCTCTTTTTGT+TGG | + | chr6_4:44162967-44162986 | Msa0988990:CDS | 50.0% |
| GTGTGACACATGTCGGAAAC+CGG | + | chr6_4:44163720-44163739 | Msa0988990:intron | 50.0% | |
| GCTTCAATCTGAATCGTCCG+TGG | + | chr6_4:44163748-44163767 | Msa0988990:intron | 50.0% | |
| GTTCTGCCAGAGCTGTTAAC+CGG | + | chr6_4:44163928-44163947 | Msa0988990:CDS | 50.0% | |
| ! | ATAACGCCGGTTAACAGCTC+TGG | - | chr6_4:44163937-44163956 | None:intergenic | 50.0% |
| ! | GCTTGCATGCGGATTTTCAG+TGG | - | chr6_4:44163975-44163994 | None:intergenic | 50.0% |
| AACCAGCTGATGCTTGCATG+CGG | - | chr6_4:44163986-44164005 | None:intergenic | 50.0% | |
| TAGTGCTAGTGCTCTCGGAA+TGG | + | chr6_4:44164010-44164029 | Msa0988990:CDS | 50.0% | |
| TGGAGTATGCCAGCTAATGC+AGG | - | chr6_4:44164044-44164063 | None:intergenic | 50.0% | |
| TGTCCCTGTGCAGTAGACAA+TGG | + | chr6_4:44164397-44164416 | Msa0988990:intron | 50.0% | |
| GCACCATTGTCTACTGCACA+GGG | - | chr6_4:44164403-44164422 | None:intergenic | 50.0% | |
| TGCACCATTGTCTACTGCAC+AGG | - | chr6_4:44164404-44164423 | None:intergenic | 50.0% | |
| ! | TGATAGTGAGGAAGCTCCAG+AGG | + | chr6_4:44164516-44164535 | Msa0988990:CDS | 50.0% |
| GCCGATCCAATTGAATTGGC+CGG | - | chr6_4:44164553-44164572 | None:intergenic | 50.0% | |
| ! | GCGGTTTTTCTTGCTTGCCT+TGG | + | chr6_4:44164988-44165007 | Msa0988990:intron | 50.0% |
| CAGGAAGAACTGTCAAGCCA+AGG | - | chr6_4:44165008-44165027 | None:intergenic | 50.0% | |
| GATCGAGTAGAGCGGACAAA+TGG | + | chr6_4:44165145-44165164 | Msa0988990:intron | 50.0% | |
| GAGCCGCAATACATCTGTTC+GGG | + | chr6_4:44165450-44165469 | Msa0988990:CDS | 50.0% | |
| CTTTCTCGCGGAACCTACAA+TGG | + | chr6_4:44165931-44165950 | Msa0988990:CDS | 50.0% | |
| AGACAGAAGACCGCCATTGT+AGG | - | chr6_4:44165947-44165966 | None:intergenic | 50.0% | |
| ! | CAACTTTACCGGTTGCGCCA+AGG | - | chr6_4:44159430-44159449 | None:intergenic | 55.0% |
| CACTAAAGCTCTCGCAACGC+AGG | - | chr6_4:44159563-44159582 | None:intergenic | 55.0% | |
| ! | TGCGAGAGCTTTAGTGCACC+AGG | + | chr6_4:44159567-44159586 | Msa0988990:intron | 55.0% |
| ACTCTCCGGTTTCTGCGGAA+AGG | + | chr6_4:44160657-44160676 | Msa0988990:intron | 55.0% | |
| CTCTCCGGTTTCTGCGGAAA+GGG | + | chr6_4:44160658-44160677 | Msa0988990:intron | 55.0% | |
| GATCCTCAGAAGGGGTAGGA+AGG | - | chr6_4:44162711-44162730 | None:intergenic | 55.0% | |
| GCCTCTTGTATTCAGCAGCG+TGG | + | chr6_4:44162954-44162973 | Msa0988990:CDS | 55.0% | |
| GCCACGCTGCTGAATACAAG+AGG | - | chr6_4:44162958-44162977 | None:intergenic | 55.0% | |
| CCTAGGGGGTAAACCGGAAA+TGG | - | chr6_4:44163399-44163418 | None:intergenic | 55.0% | |
| CCATTTCCGGTTTACCCCCT+AGG | + | chr6_4:44163396-44163415 | Msa0988990:intron | 55.0% | |
| !! | GGCCTATTAGGGGGGTATTC+TGG | + | chr6_4:44163526-44163545 | Msa0988990:intron | 55.0% |
| CACATGTCGGAAACCGGACA+CGG | + | chr6_4:44163726-44163745 | Msa0988990:intron | 55.0% | |
| ATCCGCATGCAAGCATCAGC+TGG | + | chr6_4:44163981-44164000 | Msa0988990:CDS | 55.0% | |
| AGTGCTCTCGGAATGGCATG+CGG | + | chr6_4:44164017-44164036 | Msa0988990:CDS | 55.0% | |
| !! | TACCTTGCCTGGGTGGGTTA+TGG | + | chr6_4:44164103-44164122 | Msa0988990:CDS | 55.0% |
| !! | GGTGGGTTATGGCTGTTGCT+TGG | + | chr6_4:44164114-44164133 | Msa0988990:CDS | 55.0% |
| ! | GGTTATGGCTGTTGCTTGGC+TGG | + | chr6_4:44164118-44164137 | Msa0988990:CDS | 55.0% |
| TCCAGAGGAATCTCGCCTTC+CGG | + | chr6_4:44164531-44164550 | Msa0988990:CDS | 55.0% | |
| CGCCTTCCGGCCAATTCAAT+TGG | + | chr6_4:44164544-44164563 | Msa0988990:CDS | 55.0% | |
| CTGGTCAACCAGCACAGTTG+CGG | + | chr6_4:44164969-44164988 | Msa0988990:intron | 55.0% | |
| TCTCGCGGAACCTACAATGG+CGG | + | chr6_4:44165934-44165953 | Msa0988990:CDS | 55.0% | |
| AGGGGTAACCTTGGCGCAAC+CGG | + | chr6_4:44159419-44159438 | Msa0988990:intron | 60.0% | |
| AGCTCTCGCAACGCAGGGTT+CGG | - | chr6_4:44159557-44159576 | None:intergenic | 60.0% | |
| TCAGCCTGCTCTTCCTCTCC+AGG | + | chr6_4:44162120-44162139 | Msa0988990:intron | 60.0% | |
| CGACCTTCCTACCCCTTCTG+AGG | + | chr6_4:44162705-44162724 | Msa0988990:CDS | 60.0% | |
| !! | AAGCCTTGGTGCTGCGCCAA+CGG | + | chr6_4:44162843-44162862 | Msa0988990:CDS | 60.0% |
| AAACCGTTGGCGCAGCACCA+AGG | - | chr6_4:44162849-44162868 | None:intergenic | 60.0% | |
| TGGGGCAATGGCTGTTGCAC+AGG | + | chr6_4:44162882-44162901 | Msa0988990:CDS | 60.0% | |
| GCATGCGGTCCTGCATTAGC+TGG | + | chr6_4:44164032-44164051 | Msa0988990:CDS | 60.0% | |
| AGCCATAACCCACCCAGGCA+AGG | - | chr6_4:44164108-44164127 | None:intergenic | 60.0% | |
| GCAACAGCCATAACCCACCC+AGG | - | chr6_4:44164113-44164132 | None:intergenic | 60.0% | |
| TGGCGGTCTTCTGTCTACCG+AGG | + | chr6_4:44165951-44165970 | Msa0988990:CDS | 60.0% | |
| GGTCTTCTGTCTACCGAGGC+TGG | + | chr6_4:44165955-44165974 | Msa0988990:CDS | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr6_4:44159537-44159556 | None:intergenic | 65.0% | |
| GCAACGCAGGGTTCGGGAAG+GGG | - | chr6_4:44159550-44159569 | None:intergenic | 65.0% | |
| CGCAACGCAGGGTTCGGGAA+GGG | - | chr6_4:44159551-44159570 | None:intergenic | 65.0% | |
| TCGCAACGCAGGGTTCGGGA+AGG | - | chr6_4:44159552-44159571 | None:intergenic | 65.0% | |
| GCTCTCGCAACGCAGGGTTC+GGG | - | chr6_4:44159556-44159575 | None:intergenic | 65.0% | |
| ! | GGTGCTGCGCCAACGGTTTG+CGG | + | chr6_4:44162850-44162869 | Msa0988990:CDS | 65.0% |
| GCCGGAAGGCGAGATTCCTC+TGG | - | chr6_4:44164535-44164554 | None:intergenic | 65.0% | |
| GCGAGGCCAGAGAGGGGTCA+TGG | + | chr6_4:44159700-44159719 | Msa0988990:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 44158473 | 44166547 | 44158473 | ID=Msa0988990;Name=Msa0988990 |
| chr6_4 | mRNA | 44158473 | 44166547 | 44158473 | ID=Msa0988990-mRNA-1;Parent=Msa0988990;Name=Msa0988990-mRNA-1;_AED=0.14;_eAED=0.14;_QI=286|0.83|0.92|1|0.66|0.69|13|419|631 |
| chr6_4 | exon | 44158473 | 44158485 | 44158473 | ID=Msa0988990-mRNA-1:exon:10132;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44158510 | 44158551 | 44158510 | ID=Msa0988990-mRNA-1:exon:10133;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44158589 | 44158720 | 44158589 | ID=Msa0988990-mRNA-1:exon:10134;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44158992 | 44159084 | 44158992 | ID=Msa0988990-mRNA-1:exon:10135;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44161084 | 44161142 | 44161084 | ID=Msa0988990-mRNA-1:exon:10136;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44161262 | 44161382 | 44161262 | ID=Msa0988990-mRNA-1:exon:10137;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44161589 | 44161900 | 44161589 | ID=Msa0988990-mRNA-1:exon:10138;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44162607 | 44163061 | 44162607 | ID=Msa0988990-mRNA-1:exon:10139;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44163923 | 44164224 | 44163923 | ID=Msa0988990-mRNA-1:exon:10140;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44164410 | 44164600 | 44164410 | ID=Msa0988990-mRNA-1:exon:10141;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44164883 | 44164971 | 44164883 | ID=Msa0988990-mRNA-1:exon:10142;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44165374 | 44165507 | 44165374 | ID=Msa0988990-mRNA-1:exon:10143;Parent=Msa0988990-mRNA-1 |
| chr6_4 | exon | 44165890 | 44166547 | 44165890 | ID=Msa0988990-mRNA-1:exon:10144;Parent=Msa0988990-mRNA-1 |
| chr6_4 | five_prime_UTR | 44158473 | 44158485 | 44158473 | ID=Msa0988990-mRNA-1:five_prime_utr;Parent=Msa0988990-mRNA-1 |
| chr6_4 | five_prime_UTR | 44158510 | 44158551 | 44158510 | ID=Msa0988990-mRNA-1:five_prime_utr;Parent=Msa0988990-mRNA-1 |
| chr6_4 | five_prime_UTR | 44158589 | 44158720 | 44158589 | ID=Msa0988990-mRNA-1:five_prime_utr;Parent=Msa0988990-mRNA-1 |
| chr6_4 | five_prime_UTR | 44158992 | 44159084 | 44158992 | ID=Msa0988990-mRNA-1:five_prime_utr;Parent=Msa0988990-mRNA-1 |
| chr6_4 | five_prime_UTR | 44161084 | 44161089 | 44161084 | ID=Msa0988990-mRNA-1:five_prime_utr;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44161090 | 44161142 | 44161090 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44161262 | 44161382 | 44161262 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44161589 | 44161900 | 44161589 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44162607 | 44163061 | 44162607 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44163923 | 44164224 | 44163923 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44164410 | 44164600 | 44164410 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44164883 | 44164971 | 44164883 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44165374 | 44165507 | 44165374 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | CDS | 44165890 | 44166128 | 44165890 | ID=Msa0988990-mRNA-1:cds;Parent=Msa0988990-mRNA-1 |
| chr6_4 | three_prime_UTR | 44166129 | 44166547 | 44166129 | ID=Msa0988990-mRNA-1:three_prime_utr;Parent=Msa0988990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
