AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0990550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0990550 MtrunA17_Chr6g0467521 75.945 794 73 7 824 1571 198 919 0.0 1128
Msa0990550 MtrunA17_Chr6g0467521 69.116 735 102 10 210 857 2 698 0.0 940
Msa0990550 MtrunA17_Chr6g0463231 32.512 852 348 32 195 852 76 894 3.94e-74 267
Msa0990550 MtrunA17_Chr6g0463231 32.877 511 233 16 823 1292 463 904 1.04e-47 186
Msa0990550 MtrunA17_Chr6g0463231 35.266 207 98 6 230 416 1 191 1.62e-24 111
Msa0990550 MtrunA17_Chr1g0202211 39.943 353 197 7 1216 1558 12 359 4.06e-71 243
Msa0990550 MtrunA17_Chr6g0463241 67.901 162 51 1 1412 1573 747 907 3.78e-63 234
Msa0990550 MtrunA17_Chr6g0463241 43.114 334 110 8 1007 1310 440 723 4.06e-53 202
Msa0990550 MtrunA17_Chr6g0463241 32.133 694 317 21 217 857 108 700 3.17e-51 197
Msa0990550 MtrunA17_Chr6g0463241 28.086 324 171 10 211 525 3 273 3.54e-25 114
Msa0990550 MtrunA17_Chr3g0088091 74.603 126 18 2 1099 1218 4 121 1.90e-50 174
Msa0990550 MtrunA17_Chr3g0088091 75.610 123 18 1 684 794 1 123 3.73e-49 170
Msa0990550 MtrunA17_Chr3g0088191 74.603 126 18 2 1099 1218 4 121 1.90e-50 174
Msa0990550 MtrunA17_Chr3g0088191 75.610 123 18 1 684 794 1 123 3.73e-49 170
Msa0990550 MtrunA17_Chr3g0129851 31.056 322 187 9 1253 1555 13 318 1.42e-39 150
Msa0990550 MtrunA17_Chr5g0448201 40.816 196 95 5 1368 1558 36 215 7.36e-34 130
Msa0990550 MtrunA17_Chr5g0448201 65.625 64 22 0 1256 1319 5 68 5.82e-22 96.3
Msa0990550 MtrunA17_Chr2g0277441 51.908 131 45 1 1214 1326 1 131 2.64e-32 127
Msa0990550 MtrunA17_Chr6g0467431 33.088 408 172 14 224 620 100 417 9.99e-32 133
Msa0990550 MtrunA17_Chr6g0467431 49.180 122 52 4 1380 1501 555 666 3.82e-22 103
Msa0990550 MtrunA17_Chr6g0467431 67.143 70 23 0 1212 1281 485 554 5.89e-20 96.3
Msa0990550 MtrunA17_Chr6g0467431 33.166 199 98 6 213 410 16 180 9.48e-18 89.4
Msa0990550 MtrunA17_Chr5g0395161 39.161 143 85 2 1419 1559 779 921 4.35e-24 110
Msa0990550 MtrunA17_Chr4g0021221 34.783 138 88 2 1424 1559 789 926 5.69e-21 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0990550 AT1G43770.3 45.139 144 76 3 1418 1559 286 428 1.70e-30 127
Msa0990550 AT1G43770.3 47.761 67 29 2 1255 1320 8 69 3.45e-12 70.9
Msa0990550 AT1G43770.2 45.139 144 76 3 1418 1559 286 428 1.70e-30 127
Msa0990550 AT1G43770.2 47.761 67 29 2 1255 1320 8 69 3.45e-12 70.9
Msa0990550 AT5G16680.1 40.441 136 75 3 1424 1555 837 970 3.87e-25 114
Msa0990550 AT5G16680.2 40.441 136 75 3 1424 1555 837 970 3.87e-25 114
Msa0990550 AT3G02890.1 38.095 147 87 3 1411 1555 689 833 1.40e-24 112
Msa0990550 AT3G02890.2 38.095 147 87 3 1411 1555 630 774 5.13e-24 110
Msa0990550 AT3G02890.4 37.778 135 80 3 1411 1543 689 821 1.66e-19 95.9
Msa0990550 AT1G43770.1 47.761 67 29 2 1255 1320 8 69 3.32e-12 70.5
Msa0990550 AT1G43770.1 40.000 85 49 2 1418 1501 286 369 4.22e-11 67.0

Find 345 sgRNAs with CRISPR-Local

Find 676 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTCTTGTGCTTTAAAA+TGG 0.145815 6_4:+52427077 None:intergenic
CCAGAGAGTTTCCAGTATTT+TGG 0.176804 6_4:-52423432 Msa0990550:CDS
GTAGGTTCCAAATTGAAATT+TGG 0.193313 6_4:-52425956 Msa0990550:CDS
GAGATTACTGATTCAGAAAA+AGG 0.208458 6_4:-52423798 Msa0990550:CDS
GAGATTACTGATTCAGAAAA+AGG 0.208458 6_4:-52423894 Msa0990550:CDS
GAGATTACTGATTCAGAAAA+AGG 0.208458 6_4:-52423990 Msa0990550:CDS
AGACTATTTCCAAATTCTTC+TGG 0.228796 6_4:-52427294 Msa0990550:CDS
GGCTTCATTCCAGAAGAATT+TGG 0.231452 6_4:+52426082 None:intergenic
GGATTCATTCCAGAAGAATT+TGG 0.234605 6_4:+52427285 None:intergenic
AACATTCTTGTGCTTTAAAA+TGG 0.242125 6_4:+52425772 None:intergenic
GAAATTGGTCTCTGTGTTAC+TGG 0.245506 6_4:-52431835 Msa0990550:CDS
ATAGTGAACAATTTGATTAT+AGG 0.247388 6_4:-52431709 Msa0990550:CDS
TGGTTCCAAGCGTGATATTA+TGG 0.252107 6_4:-52425696 Msa0990550:CDS
TGGTTCCAAGCGTGAAATTA+TGG 0.252107 6_4:-52427001 Msa0990550:CDS
GATTATTCGTTCCAAAATAC+TGG 0.255999 6_4:+52423421 None:intergenic
GCGGCTGTGGTGTTTGATTC+TGG 0.259701 6_4:-52432075 Msa0990550:CDS
CTCTTATCAGAATAGGGTTT+TGG 0.267805 6_4:+52427567 None:intergenic
TTCTGGCCGGATGTTGATTA+AGG 0.268157 6_4:-52432058 Msa0990550:CDS
ACAGGTATTGGTGTCCTTCT+AGG 0.271821 6_4:+52425455 None:intergenic
AACCCATATCGTGAGGAATT+TGG 0.271846 6_4:+52427997 None:intergenic
TAGTGAACAATTTGATTATA+GGG 0.274216 6_4:-52431708 Msa0990550:intron
CTTGTGATGTTCTTTGCCTT+TGG 0.275014 6_4:+52425349 None:intergenic
TTACCAAATTCCTCACGATA+TGG 0.276285 6_4:-52428000 Msa0990550:CDS
AGAGTAGTTCCAAATTCTTC+TGG 0.288066 6_4:-52426091 Msa0990550:CDS
ATAATCCCCAAATTTCAATT+TGG 0.291866 6_4:+52425949 None:intergenic
CCCTTTAAACCGTGATCCTT+TGG 0.300078 6_4:+52425818 None:intergenic
TAGGTTCCAAATTGAAATTT+GGG 0.313943 6_4:-52425955 Msa0990550:CDS
TCCAAAGGATCACGGTTTAA+AGG 0.314604 6_4:-52425819 Msa0990550:CDS
CTTGTCTCCTCAAGAACTTT+AGG 0.315407 6_4:+52423507 None:intergenic
CGGTGGTTTGGCCGGTTTAA+CGG 0.320583 6_4:-52432097 Msa0990550:CDS
ATATGCCATTCGATGATTTC+AGG 0.323515 6_4:-52428049 Msa0990550:CDS
CTCCAGATTGGATCAGAAAT+AGG 0.331134 6_4:+52423720 None:intergenic
TTTGACTGCCGACGTTGTAC+TGG 0.333909 6_4:+52427459 None:intergenic
CTGGTTCTCAACAAAAGCTT+TGG 0.340102 6_4:-52423576 Msa0990550:CDS
AAATACATGAAGATGGATAA+TGG 0.341748 6_4:-52425659 Msa0990550:CDS
AAATACATGAAGATGGATAA+TGG 0.341748 6_4:-52426964 Msa0990550:CDS
AAGAAGAGTGGTACACGTTT+AGG 0.343130 6_4:-52430860 Msa0990550:CDS
AATACATGAAGATGGATAAT+GGG 0.343174 6_4:-52425658 Msa0990550:CDS
AATACATGAAGATGGATAAT+GGG 0.343174 6_4:-52426963 Msa0990550:CDS
TGGTGATGGAGTGGGAAGGC+AGG 0.346929 6_4:-52431568 Msa0990550:CDS
GGATAATAGGGGAAGTTTGC+TGG 0.348401 6_4:-52423595 Msa0990550:intron
CTGTGTGCTTGTTGTGGATT+GGG 0.348621 6_4:-52432167 Msa0990550:CDS
TTAGATTCTGCGACTTTCAT+AGG 0.351702 6_4:+52427252 None:intergenic
TTGTTATCGGCATAGTCTTC+CGG 0.352583 6_4:+52427609 None:intergenic
TTAGACTCTGCGACTTTCAT+AGG 0.353164 6_4:+52426049 None:intergenic
CAGAATTCACAACTTCTGTT+TGG 0.354750 6_4:+52426527 None:intergenic
CCTGTGTGCTTGTTGTGGAT+TGG 0.358691 6_4:-52432168 Msa0990550:CDS
TGAGGAAACCTAGATCTAAA+AGG 0.363047 6_4:-52432200 Msa0990550:CDS
CACTTATCGGCAAAGTCTTC+CGG 0.363135 6_4:+52427525 None:intergenic
GAAATGTGATTGACTCGTTC+CGG 0.363225 6_4:-52430838 Msa0990550:CDS
CATCCTGAGGAAAGAAATAA+AGG 0.365101 6_4:+52423388 None:intergenic
GTAGATTCTAAATTGAAATC+TGG 0.366324 6_4:-52427159 Msa0990550:CDS
CTTATATCAGCAAAGTCTTC+TGG 0.366353 6_4:+52427651 None:intergenic
TGAACCAGCATCATGTATCT+TGG 0.369166 6_4:+52422885 None:intergenic
TTATGCTGGTGCTAAGGATC+GGG 0.371127 6_4:-52425930 Msa0990550:CDS
ATTGGTTGGTGTCTTGGTTT+CGG 0.386745 6_4:-52431884 Msa0990550:CDS
TCGAAACTAGATCCTTCAAC+AGG 0.387766 6_4:+52426673 None:intergenic
CAAATTTCTTACCTCCAGAT+TGG 0.390376 6_4:+52423708 None:intergenic
ATGTCTGCATCAAGCACATT+AGG 0.393570 6_4:+52423477 None:intergenic
AGCTCTCATGGCAAGGTCAT+TGG 0.397453 6_4:+52423102 None:intergenic
ACTTCCTTGTTGCTGAATCT+AGG 0.399650 6_4:+52427189 None:intergenic
TGTTTGGAAGGACATAATAA+TGG 0.400355 6_4:-52426175 Msa0990550:CDS
GACTGAACCTGACTTATCAT+TGG 0.401027 6_4:+52425601 None:intergenic
GACTGAACCTGACTTATCAT+TGG 0.401027 6_4:+52426906 None:intergenic
TGTTTCGAAGAACATAATAA+TGG 0.401712 6_4:-52427393 Msa0990550:CDS
TGCTAAGGATCGGGGTTTCA+AGG 0.405459 6_4:-52425921 Msa0990550:CDS
CACCACAGCCGCCGTTAAAC+CGG 0.407805 6_4:+52432086 None:intergenic
AGTCTACTATCTCGTCCATT+TGG 0.409427 6_4:+52427312 None:intergenic
CAATTGGTGAATGCCTCAAC+AGG 0.410343 6_4:-52425293 Msa0990550:CDS
AGATAGAGATTGCGGTGGTT+TGG 0.410401 6_4:-52432109 Msa0990550:CDS
TTGATGCGGTGAGCACTTAT+CGG 0.411574 6_4:+52427512 None:intergenic
ACCTGACTTATCATTGGTCT+CGG 0.411914 6_4:+52425607 None:intergenic
ACCTGACTTATCATTGGTCT+CGG 0.411914 6_4:+52426912 None:intergenic
TAGATTCTAAATTGAAATCT+GGG 0.412421 6_4:-52427158 Msa0990550:CDS
CCAAAGGATCACGGTTTAAA+GGG 0.412774 6_4:-52425818 Msa0990550:CDS
TGGCCTTTATTTCTTTCCTC+AGG 0.413251 6_4:-52423391 Msa0990550:CDS
TTGTTGTGGATTGGGTGTAT+TGG 0.414472 6_4:-52432159 Msa0990550:CDS
GCAAAGTCTTCTGGCGTTTG+AGG 0.415164 6_4:+52427660 None:intergenic
TAAGATGCATCGCAACTGTT+TGG 0.418390 6_4:-52426191 Msa0990550:CDS
AAACTTGACGCTGATGCATC+TGG 0.418513 6_4:+52425179 None:intergenic
TACCAAATTCCTCACGATAT+GGG 0.422393 6_4:-52427999 Msa0990550:CDS
TAAGCGCCTCTTATCAGAAT+AGG 0.423349 6_4:+52427560 None:intergenic
GCACTGAGCAGAGTTGAAAA+TGG 0.423475 6_4:+52430975 None:intergenic
ACTCTACTATCTCGTCCATT+TGG 0.424581 6_4:+52426109 None:intergenic
AAGGTCTAAACGGAAACTTA+TGG 0.424588 6_4:-52425741 Msa0990550:CDS
AAGGTCTAAACGGAAACTTA+TGG 0.424588 6_4:-52427046 Msa0990550:CDS
AGCTCCTCGATTCAGCAATA+AGG 0.424669 6_4:-52425990 Msa0990550:CDS
AAGCGCCTCTTATCAGAATA+GGG 0.427203 6_4:+52427561 None:intergenic
ACATTCTTGTGCTTTAAAAT+GGG 0.428018 6_4:+52427078 None:intergenic
TTCAATTTGGAACCTACAGC+TGG 0.428286 6_4:+52425962 None:intergenic
CAAAACCCTATTCTGATAAG+AGG 0.428741 6_4:-52427566 Msa0990550:CDS
TTTAATCCTGGTCTTTGGAC+TGG 0.432062 6_4:+52426739 None:intergenic
GACTGAACTTGACTTAGTAT+TGG 0.434979 6_4:+52425532 None:intergenic
CTAGATCCTTCAACAGGTAT+TGG 0.436357 6_4:+52425443 None:intergenic
TGCTAAGGATCTCGATTTCA+AGG 0.436779 6_4:-52427124 Msa0990550:CDS
TTGACTGCCGACGTTGTACT+GGG 0.437538 6_4:+52427460 None:intergenic
ATGTGGTAAGCACTTGTTAT+CGG 0.438398 6_4:+52427596 None:intergenic
TTTGACTGCCGACTTTGTAC+TGG 0.438699 6_4:+52426241 None:intergenic
GGCCGGTTTAACGGCGGCTG+TGG 0.438838 6_4:-52432088 Msa0990550:CDS
TAATCGAAGTTCAAGTTCAA+TGG 0.443252 6_4:+52428020 None:intergenic
AACCTATTTCTGATCCAATC+TGG 0.445687 6_4:-52423722 Msa0990550:CDS
ACCTGACTTAGCATTGGTCT+CGG 0.446228 6_4:+52426843 None:intergenic
CAATTGGTGAATGCCTCAAC+AGG 0.447435 6_4:-52426589 Msa0990550:CDS
ATTATGCTGGTGCTAAGGAT+CGG 0.448833 6_4:-52425931 Msa0990550:CDS
TCTGGATTAAAACAACCATC+AGG 0.449339 6_4:-52425491 Msa0990550:CDS
GGTGATGGAGTGGGAAGGCA+GGG 0.449937 6_4:-52431567 Msa0990550:CDS
GGCTCCCATAATTTCACGCT+TGG 0.453316 6_4:+52426996 None:intergenic
TGTTGGTTTGAACTTGTGTT+GGG 0.455795 6_4:-52432016 Msa0990550:intron
AAACAATTATAGAAGTGGTT+GGG 0.455945 6_4:-52428093 Msa0990550:CDS
GGTGAGAGTGGTGGTGGTGA+TGG 0.456643 6_4:-52431582 Msa0990550:CDS
TCAATCAAAGTATTACTTGT+GGG 0.458599 6_4:-52422935 Msa0990550:CDS
GGAACGAATAATCTAAGCAT+TGG 0.460358 6_4:-52423411 Msa0990550:CDS
GGGCAAGGTGAGAGTGGTGG+TGG 0.461254 6_4:-52431588 Msa0990550:CDS
AAATCTCTAGTCCAAAGATC+TGG 0.461782 6_4:-52425509 Msa0990550:CDS
TTTCTTGGGAGCATTGTAGA+AGG 0.462370 6_4:+52423049 None:intergenic
GGTTCCAAGCGTGATATTAT+GGG 0.462595 6_4:-52425695 Msa0990550:CDS
GGTTCCAAGCGTGAAATTAT+GGG 0.462595 6_4:-52427000 Msa0990550:CDS
CCAAAATACTGGAAACTCTC+TGG 0.465924 6_4:+52423432 None:intergenic
CTTGACTTAGCATTGGCATC+GGG 0.465998 6_4:+52426775 None:intergenic
GGTGAATGACAGACTTGGTA+TGG 0.466241 6_4:-52431611 Msa0990550:intron
TCAAAACTAGATCCTTCAAC+AGG 0.466842 6_4:+52425437 None:intergenic
AAAACAATTATAGAAGTGGT+TGG 0.466845 6_4:-52428094 Msa0990550:CDS
CCTGACTTAGCATTGGTCTC+GGG 0.470289 6_4:+52426844 None:intergenic
AGGCAATGATCAGCTACAAT+TGG 0.471377 6_4:-52426605 Msa0990550:CDS
AAAGAATGATCAGCCACAAT+TGG 0.472789 6_4:-52425309 Msa0990550:CDS
TGTTCTTCGAAACATTTGTC+AGG 0.473833 6_4:+52427402 None:intergenic
AGTTGGCAGGCTTCTGTAAG+AGG 0.473971 6_4:-52427818 Msa0990550:CDS
AAATCTCCAGTCGAAAGATC+TGG 0.475630 6_4:-52426814 Msa0990550:CDS
TGTCTTACATGTGGCGATGT+AGG 0.476362 6_4:-52424834 Msa0990550:CDS
GGACAAGTGGCACAATAATC+CGG 0.478750 6_4:+52423542 None:intergenic
CAATCAGTTGGAATATCAAA+GGG 0.480975 6_4:-52427922 Msa0990550:CDS
TCATTTATGACTACTACATC+TGG 0.481073 6_4:+52424065 None:intergenic
GAAAGTTCTACAAGGAAACT+TGG 0.481174 6_4:-52425854 Msa0990550:CDS
AGAGATTGCGGTGGTTTGGC+CGG 0.482689 6_4:-52432105 Msa0990550:CDS
CCAGGATTAAAACAACCATC+AGG 0.483015 6_4:-52426727 Msa0990550:CDS
ATGACACCAATCCCTGTTGA+AGG 0.483460 6_4:-52426685 Msa0990550:CDS
AAATTCTTCTGGAATGAATC+CGG 0.483713 6_4:-52427283 Msa0990550:CDS
TTCAATTTAGAATCTACAGC+TGG 0.484202 6_4:+52427165 None:intergenic
TTCCGTTTAGACCTTTCAGC+TGG 0.484996 6_4:+52425749 None:intergenic
TTCCGTTTAGACCTTTCAGC+TGG 0.484996 6_4:+52427054 None:intergenic
TATGTAGACCATGTTCAGTT+AGG 0.486944 6_4:+52426428 None:intergenic
CAAGGAAGAAGAAGTATTGA+CGG 0.487134 6_4:+52430950 None:intergenic
TCTCAGATGCTTGCCGCCGC+AGG 0.487172 6_4:-52431010 Msa0990550:intron
TTTCAAAACAATTATAGAAG+TGG 0.487475 6_4:-52428098 Msa0990550:CDS
TTGAAATTTGGGGATTATGC+TGG 0.487881 6_4:-52425944 Msa0990550:CDS
CTTCATGTATTTATCTCCTA+CGG 0.488068 6_4:+52425670 None:intergenic
CTTCATGTATTTATCTCCTA+CGG 0.488068 6_4:+52426975 None:intergenic
CTAGATCCTTCAACAGGGAT+TGG 0.489717 6_4:+52426679 None:intergenic
TGCAGACGAAAGTTCTCAAT+CGG 0.490283 6_4:-52425051 Msa0990550:CDS
CGGAATGCTATGTCGATAAG+AGG 0.490702 6_4:-52427776 Msa0990550:CDS
TGCTGAATCTAGGAGCTTCA+CGG 0.492459 6_4:+52427199 None:intergenic
TGAATCTGTCGACTCACTAT+CGG 0.495129 6_4:+52424040 None:intergenic
TTCCAGCTGAAAGGTCTAAA+CGG 0.495192 6_4:-52425751 Msa0990550:CDS
TTCCAGCTGAAAGGTCTAAA+CGG 0.495192 6_4:-52427056 Msa0990550:CDS
CCTGACTTATCATTGGTCTC+GGG 0.495496 6_4:+52425608 None:intergenic
CCTGACTTATCATTGGTCTC+GGG 0.495496 6_4:+52426913 None:intergenic
TAGTGTCCCGGTATTTGATC+AGG 0.495604 6_4:+52427747 None:intergenic
AAAGTTCTACAAGGAAACTT+GGG 0.495852 6_4:-52425853 Msa0990550:CDS
GACTGAACTTGACTTAGCAT+TGG 0.496951 6_4:+52426768 None:intergenic
TTCTCAATCGGAAGTGGAGA+TGG 0.497579 6_4:-52425039 Msa0990550:CDS
TTCTCAGTCGGAAGTGGAGA+TGG 0.497579 6_4:-52426317 Msa0990550:CDS
ACACTGTCCACGCGAAGCTA+TGG 0.498011 6_4:-52430883 Msa0990550:CDS
GACTGAACCTGACTTAGCAT+TGG 0.498202 6_4:+52426837 None:intergenic
TATCTAGACCACGTTCAGAT+AGG 0.499680 6_4:+52425150 None:intergenic
CGAAAGTTCTCAATCGGAAG+TGG 0.499707 6_4:-52425045 Msa0990550:CDS
AAATCATTTCATCAACTAGC+TGG 0.500573 6_4:+52423125 None:intergenic
CTCTTATCGACATAGCATTC+CGG 0.500661 6_4:+52427777 None:intergenic
CGAAAGTTCTCAGTCGGAAG+TGG 0.502003 6_4:-52426323 Msa0990550:CDS
CTGTGGTGTTTGATTCTGGC+CGG 0.502830 6_4:-52432071 Msa0990550:CDS
AAACATGATGCTGATGCATC+AGG 0.503435 6_4:+52426457 None:intergenic
GTGTTGGTTTGAACTTGTGT+TGG 0.505221 6_4:-52432017 Msa0990550:CDS
GTGATGGAGTGGGAAGGCAG+GGG 0.505696 6_4:-52431566 Msa0990550:CDS
TTTACTCCAGATCTTTCGAC+TGG 0.506014 6_4:+52426808 None:intergenic
CGTCACCGTGTCAAAACCGC+TGG 0.507222 6_4:-52426287 Msa0990550:CDS
TTGGGCGTTTGATGCGGCAA+AGG 0.508255 6_4:+52427711 None:intergenic
AGCATCTCCTAAAGTTCTTG+AGG 0.508592 6_4:-52423514 Msa0990550:CDS
TGCTGATGTGGGATGTGATG+TGG 0.508644 6_4:+52427959 None:intergenic
CCCGAGACCAATGCTAAGTC+AGG 0.508813 6_4:-52426844 Msa0990550:CDS
CTCACTGTCTCGACATGTCT+CGG 0.514225 6_4:-52425390 Msa0990550:CDS
TTGATGTTGAAATCTTGTGT+TGG 0.517057 6_4:-52432033 Msa0990550:CDS
AGGAGATAAATACATGAAGA+TGG 0.517228 6_4:-52425666 Msa0990550:CDS
AGGAGATAAATACATGAAGA+TGG 0.517228 6_4:-52426971 Msa0990550:CDS
ACAATCAGTTGGAATATCAA+AGG 0.519007 6_4:-52427923 Msa0990550:CDS
CTTTGTACTGGAGCTATAGC+AGG 0.519983 6_4:+52426253 None:intergenic
TCACAAGTTTCAAAATATTG+TGG 0.520395 6_4:-52425333 Msa0990550:CDS
ATCTACCTGTGTGCTTGTTG+TGG 0.520470 6_4:-52432173 Msa0990550:CDS
TCAAATCCTTAATCAACATC+CGG 0.520484 6_4:+52432052 None:intergenic
AGAGACAACTAAGTTGCCTC+AGG 0.520643 6_4:-52424997 Msa0990550:intron
TTGAAAGATCGAAAGTTGGC+AGG 0.521065 6_4:-52427831 Msa0990550:CDS
GTCACCGCTATGCTGATGAT+TGG 0.521149 6_4:-52427899 Msa0990550:CDS
TCTAATATGACACACACTGC+TGG 0.521152 6_4:-52426565 Msa0990550:CDS
GGCTCCCATAATATCACGCT+TGG 0.524229 6_4:+52425691 None:intergenic
TGCTCACCGCATCAAACGCT+GGG 0.524435 6_4:-52427504 Msa0990550:CDS
TGGGGATTATGCTGGTGCTA+AGG 0.525190 6_4:-52425936 Msa0990550:CDS
AACACTGGTGCAAAGGATGA+TGG 0.525656 6_4:-52425716 Msa0990550:CDS
AACACTGGTGCAAAGGATGA+TGG 0.525656 6_4:-52427021 Msa0990550:CDS
ATTTCTTTCCTCAGGATGAA+AGG 0.525693 6_4:-52423383 Msa0990550:intron
CAAAATGGTAACGGCAGGCG+TGG 0.525891 6_4:+52431523 None:intergenic
TCTAATATGACAGACACTAC+TGG 0.527323 6_4:-52425269 Msa0990550:CDS
GGGGCTAACGCAGGAATAGT+TGG 0.528419 6_4:+52427480 None:intergenic
ATTGGATCAGAAATAGGTTG+TGG 0.529705 6_4:+52423726 None:intergenic
CTCTTGTCACTGTAGTGTCC+CGG 0.530741 6_4:+52427735 None:intergenic
GAGTGGTGGTGGTGATGGAG+TGG 0.532561 6_4:-52431577 Msa0990550:CDS
AGCTTTGGCAAAATCATCAC+CGG 0.533133 6_4:-52423561 Msa0990550:CDS
CTTTGCTGATGACAATCAGT+TGG 0.533358 6_4:-52427934 Msa0990550:CDS
GGAGCTATAGCAGGAATAGT+TGG 0.535109 6_4:+52426262 None:intergenic
GTGCTCACCGCATCAAACGC+TGG 0.537759 6_4:-52427505 Msa0990550:CDS
CCCGAGACCAATGATAAGTC+AGG 0.538183 6_4:-52425608 Msa0990550:CDS
CCCGAGACCAATGATAAGTC+AGG 0.538183 6_4:-52426913 Msa0990550:CDS
TTCAATCAAAGTATTACTTG+TGG 0.538588 6_4:-52422936 Msa0990550:CDS
GCGGTTACCTGATCAAATAC+CGG 0.539581 6_4:-52427754 Msa0990550:CDS
GTAAAGCTTGTGCACTGCAT+AGG 0.540182 6_4:-52424779 Msa0990550:intron
GTTGAGGCATTCACCAATTG+TGG 0.541328 6_4:+52425296 None:intergenic
ACGGAACGTAGTGTTCCAAA+TGG 0.541412 6_4:-52426124 Msa0990550:CDS
ACGGAACGTAGTGTTCCAAA+TGG 0.541412 6_4:-52427327 Msa0990550:CDS
TGGGGATTATGCTGGTGCTA+AGG 0.542858 6_4:-52427139 Msa0990550:CDS
ACTTTCATAGGTTGAACTAC+CGG 0.543554 6_4:+52427264 None:intergenic
CGGTTACCTGATCAAATACC+GGG 0.543953 6_4:-52427753 Msa0990550:CDS
AAATTCTTCTGGAATGAAGC+CGG 0.545311 6_4:-52426080 Msa0990550:CDS
CTCCTTACCACATCAAAAGC+CGG 0.547496 6_4:-52427628 Msa0990550:CDS
AAGGATCGGGGTTTCAAGGT+GGG 0.547674 6_4:-52425917 Msa0990550:CDS
AGTGGTGGTGGTGATGGAGT+GGG 0.549620 6_4:-52431576 Msa0990550:CDS
GCCATTCGATGATTTCAGGC+AGG 0.551632 6_4:-52428045 Msa0990550:CDS
TGCTGATGTGTGATGTGATG+AGG 0.552890 6_4:+52427875 None:intergenic
TCAAGTATCGGAGGCTGCAG+TGG 0.553422 6_4:-52426392 Msa0990550:CDS
AAACCGGTAGTACTTTCAAC+CGG 0.555673 6_4:+52430819 None:intergenic
GCTGATGTGGGATGTGATGT+GGG 0.556601 6_4:+52427960 None:intergenic
AACTTTAGGAGATGCTAAAG+TGG 0.557781 6_4:+52423521 None:intergenic
GCATTTACCACGTCAAAGGC+CGG 0.560961 6_4:-52427796 Msa0990550:CDS
GTGAATGACAGACTTGGTAT+GGG 0.561286 6_4:-52431610 Msa0990550:intron
GGTGAAGTCGATTTCAGCAA+AGG 0.562445 6_4:-52423777 Msa0990550:CDS
ATCAGCAAAGTGTGCTGATG+TGG 0.562829 6_4:+52427947 None:intergenic
AGGACACCAATACCTGTTGA+AGG 0.563666 6_4:-52425449 Msa0990550:CDS
CAACCATAGCTCTCATGGCA+AGG 0.564062 6_4:+52423095 None:intergenic
TTGAAATCTGGGGATTATGC+TGG 0.566263 6_4:-52427147 Msa0990550:CDS
GGTGTGTGGCTTCACCTAGA+AGG 0.566532 6_4:-52425469 Msa0990550:CDS
AAACCTTTGGGCGTTTGATG+CGG 0.566731 6_4:+52427705 None:intergenic
TATGGATAACACTGGTGCAA+AGG 0.568680 6_4:-52425723 Msa0990550:CDS
TATGGATAACACTGGTGCAA+AGG 0.568680 6_4:-52427028 Msa0990550:CDS
ACAAGAATGTTCCAGCTGAA+AGG 0.570140 6_4:-52425760 Msa0990550:CDS
ACAAGAATGTTCCAGCTGAA+AGG 0.570140 6_4:-52427065 Msa0990550:CDS
TCAAGTATCGGAAGCAGCAG+TGG 0.572021 6_4:-52425114 Msa0990550:CDS
ACGCTTGAAAGATCGAAAGT+TGG 0.572520 6_4:-52427835 Msa0990550:CDS
GTTTCAGTACTAACCTCTGA+AGG 0.573144 6_4:+52425080 None:intergenic
CAATCAAAGTATTACTTGTG+GGG 0.575768 6_4:-52422934 Msa0990550:CDS
TGTAGTTGAACCTCAAGTAT+CGG 0.578070 6_4:-52425126 Msa0990550:CDS
GTTCCGGTTGAAAGTACTAC+CGG 0.578602 6_4:-52430822 Msa0990550:intron
ACTGCTGCTTCCGATACTTG+AGG 0.580281 6_4:+52425116 None:intergenic
ACTTGACTTAGCATTGGCAT+CGG 0.580694 6_4:+52426774 None:intergenic
TTGCCGCATCAAACGCCCAA+AGG 0.580773 6_4:-52427708 Msa0990550:CDS
ATGCATCGCAACTGTTTGGA+AGG 0.581568 6_4:-52426187 Msa0990550:CDS
ACTTTCATAGGTTGAACCAC+CGG 0.582521 6_4:+52426061 None:intergenic
AAGTCTTCCGGTGTTTGTAG+TGG 0.582766 6_4:+52427537 None:intergenic
GCTGATGTGTGATGTGATGA+GGG 0.583001 6_4:+52427876 None:intergenic
AATACAGTCTCAACATGTCT+CGG 0.583110 6_4:-52425414 Msa0990550:CDS
TCGCCACATGTAAGACAGAC+AGG 0.584201 6_4:+52424840 None:intergenic
AGAGGCATTTACCACGTCAA+AGG 0.584305 6_4:-52427800 Msa0990550:CDS
AAGTCTTCTGGCGTTTGAGG+TGG 0.586892 6_4:+52427663 None:intergenic
GTTTCAGTACTAACCTCCGC+AGG 0.587845 6_4:+52426358 None:intergenic
CCAGCATCATGTATCTTGGA+TGG 0.588280 6_4:+52422889 None:intergenic
TGCAGACGAAAGTTCTCAGT+CGG 0.588783 6_4:-52426329 Msa0990550:CDS
TGAAGTTGAACCTCAAGTAT+CGG 0.590170 6_4:-52426404 Msa0990550:CDS
CCATCCAAGATACATGATGC+TGG 0.590774 6_4:-52422889 Msa0990550:CDS
ATACATGAAGATGGATAATG+GGG 0.590780 6_4:-52425657 Msa0990550:CDS
ATACATGAAGATGGATAATG+GGG 0.590780 6_4:-52426962 Msa0990550:CDS
TCGAATGTTATTAAAATCAA+CGG 0.593725 6_4:-52426143 Msa0990550:CDS
CGTGAAATTATGGGAGCCGT+AGG 0.593846 6_4:-52426991 Msa0990550:CDS
TGTAGGCTTTGAAGAGACAT+TGG 0.594230 6_4:-52424817 Msa0990550:CDS
TCTTCTTCCATAGCTTCGCG+TGG 0.595762 6_4:+52430876 None:intergenic
TTCTGGCTGAAAGTTCTACA+AGG 0.597944 6_4:-52425862 Msa0990550:CDS
CGGAAACTTATGGATAACAC+TGG 0.598529 6_4:-52425731 Msa0990550:CDS
CGGAAACTTATGGATAACAC+TGG 0.598529 6_4:-52427036 Msa0990550:CDS
CGTGATATTATGGGAGCCGT+AGG 0.599034 6_4:-52425686 Msa0990550:CDS
TCCTGCCTGAAATCATCGAA+TGG 0.601848 6_4:+52428044 None:intergenic
CTTGACTTAGTATTGGCCAC+GGG 0.602737 6_4:+52425539 None:intergenic
TTTGAACTCCTAACTGAACA+TGG 0.606590 6_4:-52426436 Msa0990550:CDS
GTGGTGGTGATGGAGTGGGA+AGG 0.608635 6_4:-52431572 Msa0990550:CDS
AATAAGGAAGTTCCAGCTGT+AGG 0.609530 6_4:-52425974 Msa0990550:CDS
AAAACAACCATCAGGGTGTG+TGG 0.612294 6_4:-52425483 Msa0990550:CDS
AAAACAACCATCAGGGTGTG+TGG 0.612294 6_4:-52426719 Msa0990550:CDS
GGAGATTGATGCTCCTTCAG+AGG 0.613112 6_4:-52425093 Msa0990550:CDS
CGAAACTAGATCCTTCAACA+GGG 0.613165 6_4:+52426674 None:intergenic
CTATAGCTCCAGTACAAAGT+CGG 0.614568 6_4:-52426249 Msa0990550:CDS
ACTGCAGCCTCCGATACTTG+AGG 0.616934 6_4:+52426394 None:intergenic
TAAGGATCGGGGTTTCAAGG+TGG 0.618487 6_4:-52425918 Msa0990550:CDS
AAAATGGTAACGGCAGGCGT+GGG 0.618563 6_4:+52431524 None:intergenic
GGTGAAGCCACACACCCTGA+TGG 0.621745 6_4:+52426712 None:intergenic
TATGCTGGTGCTAAGGATCG+GGG 0.622076 6_4:-52425929 Msa0990550:CDS
TAGCATTCCGGCCTTTGACG+TGG 0.622403 6_4:+52427789 None:intergenic
AGGTTCCAAATTGAAATTTG+GGG 0.622685 6_4:-52425954 Msa0990550:CDS
AGATTCTAAATTGAAATCTG+GGG 0.623391 6_4:-52427157 Msa0990550:CDS
AAATCTCTAGTCCAAAGACC+TGG 0.624726 6_4:-52426883 Msa0990550:CDS
AAATCTCCAGTCCAAAGACC+AGG 0.627329 6_4:-52426745 Msa0990550:CDS
AGCTCCTAGATTCAGCAACA+AGG 0.627680 6_4:-52427193 Msa0990550:CDS
GCGCTTACCACTACAAACAC+CGG 0.629204 6_4:-52427544 Msa0990550:CDS
GAGATGCTAAAGTGGACAAG+TGG 0.631568 6_4:+52423529 None:intergenic
GGTGAAGCCACACACCCTGA+TGG 0.633618 6_4:+52425476 None:intergenic
TGGTTTGGCCGGTTTAACGG+CGG 0.634807 6_4:-52432094 Msa0990550:CDS
AACACTAGTCCAAAGGATCA+CGG 0.635496 6_4:-52425827 Msa0990550:CDS
TGACCTTGCCATGAGAGCTA+TGG 0.636199 6_4:-52423098 Msa0990550:CDS
TGGGGATAACACTAGTCCAA+AGG 0.638001 6_4:-52425834 Msa0990550:CDS
AATGGCATATCATCATTGAA+CGG 0.639837 6_4:+52428062 None:intergenic
GTCACCGTGTCAAAACCGCT+GGG 0.640391 6_4:-52426286 Msa0990550:CDS
ACTTCCTTATTGCTGAATCG+AGG 0.641949 6_4:+52425986 None:intergenic
GAGTGAAAATGTACCTGCGG+CGG 0.642966 6_4:+52430997 None:intergenic
CTGGATTAAAACAACCATCA+GGG 0.644575 6_4:-52425490 Msa0990550:CDS
AGTGGAGATTGATGCTCCTG+CGG 0.644714 6_4:-52426374 Msa0990550:CDS
CGGGACACTACAGTGACAAG+AGG 0.646296 6_4:-52427734 Msa0990550:CDS
AAGTTCTACAAGGAAACTTG+GGG 0.652845 6_4:-52425852 Msa0990550:CDS
TCAGCAAAGTGTGCTGATGT+GGG 0.653886 6_4:+52427948 None:intergenic
TCACTGTCTCAAGAGTCTAA+AGG 0.653932 6_4:-52426625 Msa0990550:CDS
TTCTTCTGGAATGAAGCCGG+TGG 0.654020 6_4:-52426077 Msa0990550:CDS
AAACGTCACCTTTCATCCTG+AGG 0.654350 6_4:+52423375 None:intergenic
AGAACTACATGAGCAATCAA+CGG 0.655046 6_4:-52427346 Msa0990550:CDS
ATTAAAATCATCAAAACCCG+TGG 0.655278 6_4:-52425555 Msa0990550:CDS
GGAGATTGATGCTCCTGCGG+AGG 0.657246 6_4:-52426371 Msa0990550:CDS
TGAATGACAGACTTGGTATG+GGG 0.658644 6_4:-52431609 Msa0990550:intron
GTTGGTCCCAGCGTTTGATG+CGG 0.661463 6_4:+52427498 None:intergenic
ACTTGACTTAGTATTGGCCA+CGG 0.662978 6_4:+52425538 None:intergenic
ATACCTGTCTGTCTTACATG+TGG 0.664257 6_4:-52424843 Msa0990550:CDS
GAATGACAGACTTGGTATGG+GGG 0.667525 6_4:-52431608 Msa0990550:intron
CCAATCCACAACAAGCACAC+AGG 0.669918 6_4:+52432168 None:intergenic
TTTAGACTCTTGAGACAGTG+AGG 0.673930 6_4:+52426627 None:intergenic
AGTTGAACCTCAAGTATCGG+AGG 0.675691 6_4:-52426401 Msa0990550:CDS
TTTGGACTCTTGAGACAGTG+AGG 0.676668 6_4:+52425367 None:intergenic
CTATTTCTGATCCAATCTGG+AGG 0.679126 6_4:-52423719 Msa0990550:intron
CAGGATTAAAACAACCATCA+GGG 0.680238 6_4:-52426726 Msa0990550:CDS
TGACTGCCGACGTTGTACTG+GGG 0.680787 6_4:+52427461 None:intergenic
TCAGCAAAACCCATATCGTG+AGG 0.682222 6_4:+52427990 None:intergenic
GCGAAGCTATGGAAGAAGAG+TGG 0.690162 6_4:-52430872 Msa0990550:CDS
TGTCATATTAGAGCCTGTTG+AGG 0.690200 6_4:+52425280 None:intergenic
ATGGAGTGAAAATGTACCTG+CGG 0.690591 6_4:+52430994 None:intergenic
TTTGAACTCCTATCTGAACG+TGG 0.701119 6_4:-52425158 Msa0990550:CDS
TCACTGTCTCAAGAGTCCAA+AGG 0.703127 6_4:-52425365 Msa0990550:CDS
GCAGGAATAGTTGGTCCCAG+CGG 0.703426 6_4:+52426271 None:intergenic
CGTTAGCCCCAGTACAACGT+CGG 0.703865 6_4:-52427467 Msa0990550:CDS
TCAGGTGGTGCAGATGCAAG+TGG 0.704040 6_4:+52426475 None:intergenic
CGAGACATGTCGAGACAGTG+AGG 0.712854 6_4:+52425391 None:intergenic
AATGCTATGTCGATAAGAGG+CGG 0.714515 6_4:-52427773 Msa0990550:CDS
AATCAGTTGGAATATCAAAG+GGG 0.721881 6_4:-52427921 Msa0990550:CDS
TGATTCAAAGAGAAGCTGTG+TGG 0.722721 6_4:-52423455 Msa0990550:CDS
TGTCATATTAGAGCCTGTTG+AGG 0.726916 6_4:+52426576 None:intergenic
GGAAGAAGAAGTATTGACGG+AGG 0.735859 6_4:+52430953 None:intergenic
AGGGCCAATCATCAGCATAG+CGG 0.744214 6_4:+52427895 None:intergenic
CATGATGCTGATGCATCAGG+TGG 0.745454 6_4:+52426460 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATATGTATTTTTTTGA+AGG + chr6_4:52423907-52423926 None:intergenic 10.0%
!!! TATCAATTTTTTTTGTATAA+AGG - chr6_4:52426400-52426419 Msa0990550:CDS 10.0%
!!! TTTTATTATTATGTCCATAA+AGG + chr6_4:52423574-52423593 None:intergenic 15.0%
!!! ATAATCATAGTTTTAAAAAC+CGG - chr6_4:52423626-52423645 Msa0990550:intron 15.0%
!! TAAATTAAAAGAAACAAAAG+TGG - chr6_4:52423924-52423943 Msa0990550:CDS 15.0%
!! AAATTAAAAGAAACAAAAGT+GGG - chr6_4:52423925-52423944 Msa0990550:CDS 15.0%
!!! ACTTTTGTTTCTTTTATTTT+TGG + chr6_4:52423956-52423975 None:intergenic 15.0%
!! AAAAATAAAAGAAACAAAAG+TGG - chr6_4:52423955-52423974 Msa0990550:CDS 15.0%
!! AAAATAAAAGAAACAAAAGT+GGG - chr6_4:52423956-52423975 Msa0990550:CDS 15.0%
!!! TTTTTTTGTCTTAAATTAGA+TGG + chr6_4:52424646-52424665 None:intergenic 15.0%
!!! TAAGCAAAAAATAACTTTTT+AGG - chr6_4:52424711-52424730 Msa0990550:intron 15.0%
!! GTCACATATTATAAAATTTA+AGG + chr6_4:52424928-52424947 None:intergenic 15.0%
!! TAAATGGTTTATTTGTAATT+AGG + chr6_4:52424950-52424969 None:intergenic 15.0%
!! AAATAAACCATTTATATAGT+TGG - chr6_4:52424956-52424975 Msa0990550:intron 15.0%
!!! CGTATTTTTTATTACTATTT+TGG + chr6_4:52425114-52425133 None:intergenic 15.0%
!!! TGAGTTTTTGTTAAAAATAT+GGG - chr6_4:52425488-52425507 Msa0990550:CDS 15.0%
!!! TTATTGTATTTCTTTTGAAA+AGG - chr6_4:52425534-52425553 Msa0990550:CDS 15.0%
!!! TATTGTATTTCTTTTGAAAA+GGG - chr6_4:52425535-52425554 Msa0990550:CDS 15.0%
!! TGATATTAAAGGTTAAATAT+AGG - chr6_4:52425682-52425701 Msa0990550:CDS 15.0%
!! GATATTAAAGGTTAAATATA+GGG - chr6_4:52425683-52425702 Msa0990550:CDS 15.0%
!! AAATTATGAATATTCCAAAA+TGG + chr6_4:52425737-52425756 None:intergenic 15.0%
!!! TTGGAATATTCATAATTTTA+AGG - chr6_4:52425739-52425758 Msa0990550:CDS 15.0%
!!! ACTAATTTTGTTGTTATTTT+AGG - chr6_4:52425802-52425821 Msa0990550:CDS 15.0%
!!! TAAAAATGCTTATTTTGAAT+TGG - chr6_4:52425921-52425940 Msa0990550:CDS 15.0%
!!! AAAAATGCTTATTTTGAATT+GGG - chr6_4:52425922-52425941 Msa0990550:CDS 15.0%
!!! ATATTGAATTTTTTACGAAA+CGG - chr6_4:52426349-52426368 Msa0990550:CDS 15.0%
!! TAATATTCAACTAAAAAAGT+TGG + chr6_4:52426667-52426686 None:intergenic 15.0%
!!! ATCTTATTTATTAGTTAAGA+TGG - chr6_4:52430518-52430537 Msa0990550:intron 15.0%
!! ATAGTGAACAATTTGATTAT+AGG - chr6_4:52423359-52423378 Msa0990550:intron 20.0%
!! TAGTGAACAATTTGATTATA+GGG - chr6_4:52423360-52423379 Msa0990550:intron 20.0%
!! AATCTGTATAGGTATTAAAT+TGG - chr6_4:52423779-52423798 Msa0990550:CDS 20.0%
!!! ATCATCATAGTTTTAAAAAC+CGG + chr6_4:52424405-52424424 None:intergenic 20.0%
!! GAGTTAGATACATTAATTAT+TGG + chr6_4:52424742-52424761 None:intergenic 20.0%
!!! TAAGCAAAAAATGACTTTTT+AGG + chr6_4:52424800-52424819 None:intergenic 20.0%
!!! GTGAGTTTTTGTTAAAAATA+TGG - chr6_4:52425487-52425506 Msa0990550:CDS 20.0%
!!! TGTTAAAAATATGGGATTTT+TGG - chr6_4:52425496-52425515 Msa0990550:CDS 20.0%
!! TTTAACCTTTAATATCAATC+AGG + chr6_4:52425679-52425698 None:intergenic 20.0%
!!! CATAATTTTAAGGACTAATT+TGG - chr6_4:52425749-52425768 Msa0990550:CDS 20.0%
!!! TTATTTTGAATTGGGTTATT+GGG - chr6_4:52425930-52425949 Msa0990550:CDS 20.0%
!! AATTTGAATCTTTCTGAATT+AGG - chr6_4:52425963-52425982 Msa0990550:CDS 20.0%
!! ATTTGAATCTTTCTGAATTA+GGG - chr6_4:52425964-52425983 Msa0990550:CDS 20.0%
!! AACAATACATGAATGATTAA+CGG - chr6_4:52425989-52426008 Msa0990550:CDS 20.0%
!!! TATTGAATTTTTTACGAAAC+GGG - chr6_4:52426350-52426369 Msa0990550:CDS 20.0%
!! AATATGTAAATGAAGATTCT+TGG - chr6_4:52426582-52426601 Msa0990550:CDS 20.0%
!!! GAATGTTAGCATTTTTTTAT+GGG - chr6_4:52426617-52426636 Msa0990550:CDS 20.0%
!! TTTCAAAACAATTATAGAAG+TGG - chr6_4:52426970-52426989 Msa0990550:CDS 20.0%
!! TAGATTCTAAATTGAAATCT+GGG - chr6_4:52427910-52427929 Msa0990550:CDS 20.0%
!! TCGAATGTTATTAAAATCAA+CGG - chr6_4:52428925-52428944 Msa0990550:intron 20.0%
!!! ATATACCTTTTATGAATAAC+TGG - chr6_4:52430176-52430195 Msa0990550:intron 20.0%
!! TTAATCCAGTTATTCATAAA+AGG + chr6_4:52430184-52430203 None:intergenic 20.0%
!! AAATTAAAAGAAGAGAACAA+TGG + chr6_4:52430761-52430780 None:intergenic 20.0%
!! TCATCTTAAGAAAAATATGA+TGG + chr6_4:52430840-52430859 None:intergenic 20.0%
!!! TGACTTCTATTACATTATTT+TGG - chr6_4:52431392-52431411 Msa0990550:intron 20.0%
!! TTCAATCATAAAACCATATT+TGG + chr6_4:52431792-52431811 None:intergenic 20.0%
!!! TTTTGATTTAATCATTTTGC+AGG - chr6_4:52432107-52432126 Msa0990550:CDS 20.0%
!!! TTTGATTTAATCATTTTGCA+GGG - chr6_4:52432108-52432127 Msa0990550:CDS 20.0%
!!! TGTTGATGTTTTTGTGAAAT+TGG - chr6_4:52423218-52423237 Msa0990550:intron 25.0%
! TTTCACGCAAAATAAAAACA+GGG + chr6_4:52423303-52423322 None:intergenic 25.0%
! ATTTCACGCAAAATAAAAAC+AGG + chr6_4:52423304-52423323 None:intergenic 25.0%
!!! AGGAAAGAATATTTTGATAG+TGG - chr6_4:52423424-52423443 Msa0990550:CDS 25.0%
!!! AAGAATATTTTGATAGTGGA+TGG - chr6_4:52423428-52423447 Msa0990550:CDS 25.0%
! TAAAGGAATCAAAATGGTAA+CGG + chr6_4:52423557-52423576 None:intergenic 25.0%
!!! TTACCATTTTGATTCCTTTA+TGG - chr6_4:52423557-52423576 Msa0990550:CDS 25.0%
!!! TCTCTATTTTGAATCTGTAT+AGG - chr6_4:52423768-52423787 Msa0990550:CDS 25.0%
! AATTCAAGAGATTAAGTCAT+CGG + chr6_4:52423811-52423830 None:intergenic 25.0%
!!! CATGTTTTATTTCTCTGTTA+CGG + chr6_4:52423989-52424008 None:intergenic 25.0%
! GTAACAGAGAAATAAAACAT+GGG - chr6_4:52423988-52424007 Msa0990550:CDS 25.0%
! AGAGATAGTGAATAGATTTA+GGG + chr6_4:52424039-52424058 None:intergenic 25.0%
!!! ACATATTTTAAGAAGAAGCA+AGG + chr6_4:52424139-52424158 None:intergenic 25.0%
! CATTGAATAATCAATGTATC+TGG + chr6_4:52424775-52424794 None:intergenic 25.0%
!! AAAATTTAAGGCGTCAATAT+AGG + chr6_4:52424916-52424935 None:intergenic 25.0%
!!! TTATATAGAGGTGTCAAAAA+TGG + chr6_4:52425018-52425037 None:intergenic 25.0%
!! AATTAGTCTCCACTTTATAT+TGG + chr6_4:52425086-52425105 None:intergenic 25.0%
!! TTCTCATTGTTCTTCTTTTT+CGG - chr6_4:52425289-52425308 Msa0990550:CDS 25.0%
! CAACAAAAACTAAAACAAGA+AGG + chr6_4:52425386-52425405 None:intergenic 25.0%
! AAAACTCACTCAAAACAATA+AGG + chr6_4:52425476-52425495 None:intergenic 25.0%
!!! CTTTTGAAAAGGGTTTTTAA+TGG - chr6_4:52425545-52425564 Msa0990550:CDS 25.0%
! CAAAAAGTTCAATAGAGTTA+AGG - chr6_4:52425630-52425649 Msa0990550:CDS 25.0%
!!! AATTTTAAGGACTAATTTGG+TGG - chr6_4:52425752-52425771 Msa0990550:CDS 25.0%
! CAAAATTAGTAACTTTCACA+TGG + chr6_4:52425792-52425811 None:intergenic 25.0%
! ATTAGAAAAATTCCACATGT+TGG + chr6_4:52425829-52425848 None:intergenic 25.0%
!! TGTGGAATTTTTCTAATATG+AGG - chr6_4:52425832-52425851 Msa0990550:CDS 25.0%
!!! CTTATTTTGAATTGGGTTAT+TGG - chr6_4:52425929-52425948 Msa0990550:CDS 25.0%
!! TCTGTTGTTATTCAAGATTA+AGG - chr6_4:52426042-52426061 Msa0990550:CDS 25.0%
!! AGTAAAGTTAGTGTTTTATG+TGG - chr6_4:52426084-52426103 Msa0990550:CDS 25.0%
! TGTAGTGAAAATTTCTTGTT+TGG - chr6_4:52426113-52426132 Msa0990550:CDS 25.0%
! TGTAAATTGCAATCATGTAA+GGG - chr6_4:52426289-52426308 Msa0990550:CDS 25.0%
!!! AATCATCTAAGTTTTAAAGC+AGG - chr6_4:52426436-52426455 Msa0990550:CDS 25.0%
!!! GGAATGTTAGCATTTTTTTA+TGG - chr6_4:52426616-52426635 Msa0990550:CDS 25.0%
!!! TTGTGAATGTTTTTCAAAAC+TGG - chr6_4:52426687-52426706 Msa0990550:CDS 25.0%
!!! TGTGAATGTTTTTCAAAACT+GGG - chr6_4:52426688-52426707 Msa0990550:CDS 25.0%
! TTTGGAAGTTAAGTTTAATG+TGG - chr6_4:52426716-52426735 Msa0990550:CDS 25.0%
!!! TGATATAGTTTGTTTCTGAA+TGG - chr6_4:52426745-52426764 Msa0990550:CDS 25.0%
!! GAAACAATTGATTCATGAAA+TGG + chr6_4:52426862-52426881 None:intergenic 25.0%
! TTGTTAAGTCAAAGACATAA+TGG - chr6_4:52426893-52426912 Msa0990550:CDS 25.0%
! AAAACAATTATAGAAGTGGT+TGG - chr6_4:52426974-52426993 Msa0990550:CDS 25.0%
! AAACAATTATAGAAGTGGTT+GGG - chr6_4:52426975-52426994 Msa0990550:CDS 25.0%
! TGTTTCGAAGAACATAATAA+TGG - chr6_4:52427675-52427694 Msa0990550:CDS 25.0%
! GTAGATTCTAAATTGAAATC+TGG - chr6_4:52427909-52427928 Msa0990550:CDS 25.0%
! AGATTCTAAATTGAAATCTG+GGG - chr6_4:52427911-52427930 Msa0990550:CDS 25.0%
!!! ACATTCTTGTGCTTTAAAAT+GGG + chr6_4:52427993-52428012 None:intergenic 25.0%
!!! AACATTCTTGTGCTTTAAAA+TGG + chr6_4:52427994-52428013 None:intergenic 25.0%
! AAATACATGAAGATGGATAA+TGG - chr6_4:52428104-52428123 Msa0990550:CDS 25.0%
! AATACATGAAGATGGATAAT+GGG - chr6_4:52428105-52428124 Msa0990550:CDS 25.0%
! TAGGTTCCAAATTGAAATTT+GGG - chr6_4:52429113-52429132 Msa0990550:intron 25.0%
! ATAATCCCCAAATTTCAATT+TGG + chr6_4:52429122-52429141 None:intergenic 25.0%
!!! AACATTCTTGTGCTTTAAAA+TGG + chr6_4:52427994-52428013 None:intergenic 25.0%
! AAATACATGAAGATGGATAA+TGG - chr6_4:52428104-52428123 Msa0990550:CDS 25.0%
! AATACATGAAGATGGATAAT+GGG - chr6_4:52428105-52428124 Msa0990550:CDS 25.0%
!!! ATGATTTTAATCCAGGTTTT+TGG + chr6_4:52429504-52429523 None:intergenic 25.0%
! TCACAAGTTTCAAAATATTG+TGG - chr6_4:52429735-52429754 Msa0990550:intron 25.0%
!! GTATTATTTGAAACTTCCTA+GGG + chr6_4:52430117-52430136 None:intergenic 25.0%
!! AGTATTATTTGAAACTTCCT+AGG + chr6_4:52430118-52430137 None:intergenic 25.0%
!!! TACTGTTTTTTTCTTCTTCT+TGG - chr6_4:52430134-52430153 Msa0990550:intron 25.0%
! TGTATCGTTTCAATATTCTT+TGG + chr6_4:52430423-52430442 None:intergenic 25.0%
!! TTTTCGAACAAATTAAGATG+TGG + chr6_4:52430486-52430505 None:intergenic 25.0%
! TATTTATTAGTTAAGATGGC+TGG - chr6_4:52430522-52430541 Msa0990550:intron 25.0%
!! TCTATTTTCTTTTTGCCATA+TGG - chr6_4:52430584-52430603 Msa0990550:intron 25.0%
!! AATTTAAAAGCATGTCCATA+TGG + chr6_4:52430602-52430621 None:intergenic 25.0%
!! ACATGCTTTTAAATTTCTGT+TGG - chr6_4:52430607-52430626 Msa0990550:intron 25.0%
!!! TTTTCAGGTATTGTTTAGAT+GGG - chr6_4:52430932-52430951 Msa0990550:CDS 25.0%
!! AGTTGAATTTTGTGGATAAT+AGG - chr6_4:52431460-52431479 Msa0990550:intron 25.0%
!! GTTGAATTTTGTGGATAATA+GGG - chr6_4:52431461-52431480 Msa0990550:intron 25.0%
!! TTGAATTTTGTGGATAATAG+GGG - chr6_4:52431462-52431481 Msa0990550:intron 25.0%
!!! GGTTTTATGATTGAACATTA+TGG - chr6_4:52431797-52431816 Msa0990550:intron 25.0%
!! ATGTTAATGTCTTTTCGATA+GGG - chr6_4:52431904-52431923 Msa0990550:intron 25.0%
!! TTCAATCAAAGTATTACTTG+TGG - chr6_4:52432132-52432151 Msa0990550:CDS 25.0%
!! TCAATCAAAGTATTACTTGT+GGG - chr6_4:52432133-52432152 Msa0990550:CDS 25.0%
! TCGATTTTAGATAGAGATTG+CGG - chr6_4:52422951-52422970 Msa0990550:intron 30.0%
TCAAATCCTTAATCAACATC+CGG + chr6_4:52423019-52423038 None:intergenic 30.0%
TTGATGTTGAAATCTTGTGT+TGG - chr6_4:52423035-52423054 Msa0990550:intron 30.0%
TTCGCTGAAAAAAGAGAAAA+GGG - chr6_4:52423080-52423099 Msa0990550:CDS 30.0%
TATGATTTCTGTTTGATTGC+AGG - chr6_4:52423152-52423171 Msa0990550:intron 30.0%
! TTACTGGATTTTTCTTTTGC+AGG - chr6_4:52423249-52423268 Msa0990550:intron 30.0%
TGTAGAAACACATTAAAAGG+GGG + chr6_4:52423329-52423348 None:intergenic 30.0%
CTGTAGAAACACATTAAAAG+GGG + chr6_4:52423330-52423349 None:intergenic 30.0%
CCTGTAGAAACACATTAAAA+GGG + chr6_4:52423331-52423350 None:intergenic 30.0%
ACCTGTAGAAACACATTAAA+AGG + chr6_4:52423332-52423351 None:intergenic 30.0%
TGTCCATAAAGGAATCAAAA+TGG + chr6_4:52423563-52423582 None:intergenic 30.0%
ATGATGAAACCGGATTAAAT+CGG - chr6_4:52423723-52423742 Msa0990550:CDS 30.0%
CGTAACAGAGAAATAAAACA+TGG - chr6_4:52423987-52424006 Msa0990550:CDS 30.0%
! ATAGATTTAGGGTTATGCAT+TGG + chr6_4:52424028-52424047 None:intergenic 30.0%
GAGAGATAGTGAATAGATTT+AGG + chr6_4:52424040-52424059 None:intergenic 30.0%
GTTTGAATCATCAATCAGAT+CGG + chr6_4:52424332-52424351 None:intergenic 30.0%
TTGCTTATAAATGTGATCGA+AGG - chr6_4:52424813-52424832 Msa0990550:CDS 30.0%
TGCTTATAAATGTGATCGAA+GGG - chr6_4:52424814-52424833 Msa0990550:CDS 30.0%
!!! TCACTGTCACTTTTATATAG+AGG + chr6_4:52425030-52425049 None:intergenic 30.0%
AGTGACAAACCAATATAAAG+TGG - chr6_4:52425074-52425093 Msa0990550:CDS 30.0%
TTTCACTTTGACGGTTTATA+AGG + chr6_4:52425252-52425271 None:intergenic 30.0%
AGAACAATGAGAAAGTAACA+AGG + chr6_4:52425282-52425301 None:intergenic 30.0%
TACAAATTCAGAGACGAATT+CGG + chr6_4:52425580-52425599 None:intergenic 30.0%
!! GACCTTTTTGAAAGATTCTA+GGG - chr6_4:52425652-52425671 Msa0990550:CDS 30.0%
! AATGATTAACGGTTTTCGAA+AGG - chr6_4:52426000-52426019 Msa0990550:CDS 30.0%
! ATGATTAACGGTTTTCGAAA+GGG - chr6_4:52426001-52426020 Msa0990550:CDS 30.0%
TGAATCTGTAAAGTTAGCAT+TGG - chr6_4:52426194-52426213 Msa0990550:CDS 30.0%
! TATCGTTAGTTACATTGACT+TGG - chr6_4:52426240-52426259 Msa0990550:CDS 30.0%
CTTACATGATTGCAATTTAC+AGG + chr6_4:52426290-52426309 None:intergenic 30.0%
CTGTAAATTGCAATCATGTA+AGG - chr6_4:52426288-52426307 Msa0990550:CDS 30.0%
GTAAATTGCAATCATGTAAG+GGG - chr6_4:52426290-52426309 Msa0990550:CDS 30.0%
TGAGTGTATTTGATGAATGT+TGG - chr6_4:52426317-52426336 Msa0990550:CDS 30.0%
GAGTGTATTTGATGAATGTT+GGG - chr6_4:52426318-52426337 Msa0990550:CDS 30.0%
! AGATTCTTGGTAGTAATTGT+CGG - chr6_4:52426595-52426614 Msa0990550:CDS 30.0%
TTGAATGCTTATTTGCAGAT+AGG - chr6_4:52426943-52426962 Msa0990550:CDS 30.0%
AATGGCATATCATCATTGAA+CGG + chr6_4:52427009-52427028 None:intergenic 30.0%
! TAATCGAAGTTCAAGTTCAA+TGG + chr6_4:52427051-52427070 None:intergenic 30.0%
ACAATCAGTTGGAATATCAA+AGG - chr6_4:52427145-52427164 Msa0990550:CDS 30.0%
CAATCAGTTGGAATATCAAA+GGG - chr6_4:52427146-52427165 Msa0990550:CDS 30.0%
AATCAGTTGGAATATCAAAG+GGG - chr6_4:52427147-52427166 Msa0990550:CDS 30.0%
! CTTTTATCAGCAAAACCTTT+GGG + chr6_4:52427378-52427397 None:intergenic 30.0%
! TCTTTTATCAGCAAAACCTT+TGG + chr6_4:52427379-52427398 None:intergenic 30.0%
AGACTATTTCCAAATTCTTC+TGG - chr6_4:52427774-52427793 Msa0990550:CDS 30.0%
!! AAATTCTTCTGGAATGAATC+CGG - chr6_4:52427785-52427804 Msa0990550:CDS 30.0%
TCGCAGAATCTAAGAAAAAT+GGG - chr6_4:52427826-52427845 Msa0990550:CDS 30.0%
! TTCAATTTAGAATCTACAGC+TGG + chr6_4:52427906-52427925 None:intergenic 30.0%
CTTCATGTATTTATCTCCTA+CGG + chr6_4:52428096-52428115 None:intergenic 30.0%
AGGAGATAAATACATGAAGA+TGG - chr6_4:52428097-52428116 Msa0990550:CDS 30.0%
ATACATGAAGATGGATAATG+GGG - chr6_4:52428106-52428125 Msa0990550:CDS 30.0%
!! ATGATTTTAATCCAGGTCTT+TGG + chr6_4:52428199-52428218 None:intergenic 30.0%
!! GGTTTTGATGATTTTAATCC+AGG + chr6_4:52428206-52428225 None:intergenic 30.0%
TGTTTGGAAGGACATAATAA+TGG - chr6_4:52428893-52428912 Msa0990550:intron 30.0%
GTAGGTTCCAAATTGAAATT+TGG - chr6_4:52429112-52429131 Msa0990550:intron 30.0%
AGGTTCCAAATTGAAATTTG+GGG - chr6_4:52429114-52429133 Msa0990550:intron 30.0%
! ACATTTTTCTGCTTGAAACT+AGG + chr6_4:52429187-52429206 None:intergenic 30.0%
TTTCAAGCAGAAAAATGTTC+TGG - chr6_4:52429189-52429208 Msa0990550:intron 30.0%
AAAGTTCTACAAGGAAACTT+GGG - chr6_4:52429215-52429234 Msa0990550:intron 30.0%
CTTCATGTATTTATCTCCTA+CGG + chr6_4:52428096-52428115 None:intergenic 30.0%
AGGAGATAAATACATGAAGA+TGG - chr6_4:52428097-52428116 Msa0990550:CDS 30.0%
ATACATGAAGATGGATAATG+GGG - chr6_4:52428106-52428125 Msa0990550:CDS 30.0%
!! GGTTTTGATGATTTTAATCC+AGG + chr6_4:52428206-52428225 None:intergenic 30.0%
ATTAAAATCATCAAAACCCG+TGG - chr6_4:52428208-52428227 Msa0990550:intron 30.0%
!!! GTTGTTTTAATCCAGATCTT+TGG + chr6_4:52429573-52429592 None:intergenic 30.0%
ATGCAATGCAAAATAGTAGA+TGG + chr6_4:52430334-52430353 None:intergenic 30.0%
AAAATATGATGGCAAAACAC+AGG + chr6_4:52430829-52430848 None:intergenic 30.0%
!!! CACATTCTAAAATACCGTTT+TGG - chr6_4:52430907-52430926 Msa0990550:CDS 30.0%
CATCTAAACAATACCTGAAA+AGG + chr6_4:52430933-52430952 None:intergenic 30.0%
!!! CTTTTCAGGTATTGTTTAGA+TGG - chr6_4:52430931-52430950 Msa0990550:CDS 30.0%
TCATTTATGACTACTACATC+TGG + chr6_4:52431006-52431025 None:intergenic 30.0%
!! GAGATTACTGATTCAGAAAA+AGG - chr6_4:52431078-52431097 Msa0990550:intron 30.0%
!! GAGATTACTGATTCAGAAAA+AGG - chr6_4:52431078-52431097 Msa0990550:intron 30.0%
!! GAGATTACTGATTCAGAAAA+AGG - chr6_4:52431078-52431097 Msa0990550:intron 30.0%
!! TTGTCTGAAGTTGAATTTTG+TGG - chr6_4:52431452-52431471 Msa0990550:intron 30.0%
GATTATTCGTTCCAAAATAC+TGG + chr6_4:52431650-52431669 None:intergenic 30.0%
! AAGTCTTATCTCAATAAGCA+GGG + chr6_4:52431846-52431865 None:intergenic 30.0%
! AAAGTCTTATCTCAATAAGC+AGG + chr6_4:52431847-52431866 None:intergenic 30.0%
CTATCGAAAAGACATTAACA+TGG + chr6_4:52431905-52431924 None:intergenic 30.0%
! CATGTTAATGTCTTTTCGAT+AGG - chr6_4:52431903-52431922 Msa0990550:intron 30.0%
AAATCATTTCATCAACTAGC+TGG + chr6_4:52431946-52431965 None:intergenic 30.0%
! ACTCACTCTTGTATTTTCTT+GGG + chr6_4:52432036-52432055 None:intergenic 30.0%
! AACTCACTCTTGTATTTTCT+TGG + chr6_4:52432037-52432056 None:intergenic 30.0%
! CAATCAAAGTATTACTTGTG+GGG - chr6_4:52432134-52432153 Msa0990550:CDS 30.0%
TGAGGAAACCTAGATCTAAA+AGG - chr6_4:52422868-52422887 Msa0990550:CDS 35.0%
! AGATGCATCCTTTTAGATCT+AGG + chr6_4:52422879-52422898 None:intergenic 35.0%
! ATTTTAGATAGAGATTGCGG+TGG - chr6_4:52422954-52422973 Msa0990550:intron 35.0%
!! TGTTGGTTTGAACTTGTGTT+GGG - chr6_4:52423052-52423071 Msa0990550:CDS 35.0%
GTTCGCTGAAAAAAGAGAAA+AGG - chr6_4:52423079-52423098 Msa0990550:CDS 35.0%
GATTGCAGGTTGTGAAAAAT+TGG - chr6_4:52423166-52423185 Msa0990550:intron 35.0%
! TGAAAAATTGGTTGGTGTCT+TGG - chr6_4:52423178-52423197 Msa0990550:intron 35.0%
TTTGCAGGTTGTGAAAGAAT+TGG - chr6_4:52423264-52423283 Msa0990550:intron 35.0%
TTGCAGGTTGTGAAAGAATT+GGG - chr6_4:52423265-52423284 Msa0990550:intron 35.0%
!! CCCTTTTAATGTGTTTCTAC+AGG - chr6_4:52423328-52423347 Msa0990550:intron 35.0%
!! TTTGATAGTGGATGGATGAA+TGG - chr6_4:52423436-52423455 Msa0990550:CDS 35.0%
!!! CATAGTTTTAAAAACCGGAC+CGG - chr6_4:52423631-52423650 Msa0990550:intron 35.0%
TTTAATCCGGTTTCATCATG+CGG + chr6_4:52423722-52423741 None:intergenic 35.0%
!! GATGACTCGGTTAAATAACT+CGG - chr6_4:52423745-52423764 Msa0990550:CDS 35.0%
!! CAAGGAAGAAGAAGTATTGA+CGG + chr6_4:52424121-52424140 None:intergenic 35.0%
! ATTGATGATTCAAACCGCTT+AGG - chr6_4:52424337-52424356 Msa0990550:intron 35.0%
!!! CATAGTTTTAAAAACCGGAC+CGG + chr6_4:52423631-52423650 None:intergenic 35.0%
!!! TTTTTTTGACATACTCCCTC+TGG - chr6_4:52424679-52424698 Msa0990550:intron 35.0%
TGCTTATAAATGTGACCAGA+GGG + chr6_4:52424697-52424716 None:intergenic 35.0%
TTGCTTATAAATGTGACCAG+AGG + chr6_4:52424698-52424717 None:intergenic 35.0%
! AAGGCGTCAATATAGGTTAT+TGG + chr6_4:52424909-52424928 None:intergenic 35.0%
GTCATCCTAGATTTATGGTT+TGG + chr6_4:52424991-52425010 None:intergenic 35.0%
GTTTGGTCATCCTAGATTTA+TGG + chr6_4:52424996-52425015 None:intergenic 35.0%
!! TAGAGGTGTCAAAAATGGTT+TGG + chr6_4:52425013-52425032 None:intergenic 35.0%
!! CACGGAAAGATTGTTTTGTA+GGG + chr6_4:52425222-52425241 None:intergenic 35.0%
!! ACACGGAAAGATTGTTTTGT+AGG + chr6_4:52425223-52425242 None:intergenic 35.0%
GAGAAACCCTTCTAATCATT+CGG - chr6_4:52425311-52425330 Msa0990550:CDS 35.0%
CAGAGAAGAAAAACTAACCA+TGG + chr6_4:52425341-52425360 None:intergenic 35.0%
TCTCTGAATTTGTACCAACT+TGG - chr6_4:52425586-52425605 Msa0990550:CDS 35.0%
TGAATTTGTACCAACTTGGT+CGG - chr6_4:52425590-52425609 Msa0990550:CDS 35.0%
!! GGACCTTTTTGAAAGATTCT+AGG - chr6_4:52425651-52425670 Msa0990550:CDS 35.0%
GTCCCTAGAATCTTTCAAAA+AGG + chr6_4:52425657-52425676 None:intergenic 35.0%
AGGGACCTGATTGATATTAA+AGG - chr6_4:52425671-52425690 Msa0990550:CDS 35.0%
!!! GTTATTTTAGGACCAACATG+TGG - chr6_4:52425814-52425833 Msa0990550:CDS 35.0%
GAATTGGGTTATTGGGAAAA+AGG - chr6_4:52425937-52425956 Msa0990550:CDS 35.0%
TCTCTTTGTACTGTGAAGTT+CGG - chr6_4:52426466-52426485 Msa0990550:CDS 35.0%
GGTTGAAATTCTGTGAAATC+TGG - chr6_4:52426487-52426506 Msa0990550:CDS 35.0%
!! TTTCAAAACTGGGACTAGTT+TGG - chr6_4:52426698-52426717 Msa0990550:CDS 35.0%
ATATGCCATTCGATGATTTC+AGG - chr6_4:52427019-52427038 Msa0990550:CDS 35.0%
TTACCAAATTCCTCACGATA+TGG - chr6_4:52427068-52427087 Msa0990550:CDS 35.0%
TACCAAATTCCTCACGATAT+GGG - chr6_4:52427069-52427088 Msa0990550:CDS 35.0%
! ATATGGGTTTTGCTGATGAT+TGG - chr6_4:52427085-52427104 Msa0990550:CDS 35.0%
CTTATATCAGCAAAGTCTTC+TGG + chr6_4:52427420-52427439 None:intergenic 35.0%
!! ATGTGGTAAGCACTTGTTAT+CGG + chr6_4:52427475-52427494 None:intergenic 35.0%
! CTCTTATCAGAATAGGGTTT+TGG + chr6_4:52427504-52427523 None:intergenic 35.0%
CAAAACCCTATTCTGATAAG+AGG - chr6_4:52427502-52427521 Msa0990550:CDS 35.0%
TGTTCTTCGAAACATTTGTC+AGG + chr6_4:52427669-52427688 None:intergenic 35.0%
AGAACTACATGAGCAATCAA+CGG - chr6_4:52427722-52427741 Msa0990550:CDS 35.0%
GGATTCATTCCAGAAGAATT+TGG + chr6_4:52427786-52427805 None:intergenic 35.0%
! ACTTTCATAGGTTGAACTAC+CGG + chr6_4:52427807-52427826 None:intergenic 35.0%
TTAGATTCTGCGACTTTCAT+AGG + chr6_4:52427819-52427838 None:intergenic 35.0%
GTCGCAGAATCTAAGAAAAA+TGG - chr6_4:52427825-52427844 Msa0990550:CDS 35.0%
AAGGTCTAAACGGAAACTTA+TGG - chr6_4:52428022-52428041 Msa0990550:CDS 35.0%
!!! GTTGTTTTAATCCTGGTCTT+TGG + chr6_4:52428337-52428356 None:intergenic 35.0%
CAGGATTAAAACAACCATCA+GGG - chr6_4:52428342-52428361 Msa0990550:intron 35.0%
CAGAATTCACAACTTCTGTT+TGG + chr6_4:52428544-52428563 None:intergenic 35.0%
TTTGAACTCCTAACTGAACA+TGG - chr6_4:52428632-52428651 Msa0990550:intron 35.0%
TATGTAGACCATGTTCAGTT+AGG + chr6_4:52428643-52428662 None:intergenic 35.0%
TGAAGTTGAACCTCAAGTAT+CGG - chr6_4:52428664-52428683 Msa0990550:intron 35.0%
AGAGTAGTTCCAAATTCTTC+TGG - chr6_4:52428977-52428996 Msa0990550:intron 35.0%
!! AAATTCTTCTGGAATGAAGC+CGG - chr6_4:52428988-52429007 Msa0990550:intron 35.0%
TCGCAGAGTCTAAGAAAAAT+GGG - chr6_4:52429029-52429048 Msa0990550:intron 35.0%
TTGAAATTTGGGGATTATGC+TGG - chr6_4:52429124-52429143 Msa0990550:intron 35.0%
GAAAGTTCTACAAGGAAACT+TGG - chr6_4:52429214-52429233 Msa0990550:intron 35.0%
AAGTTCTACAAGGAAACTTG+GGG - chr6_4:52429216-52429235 Msa0990550:intron 35.0%
AAGGTCTAAACGGAAACTTA+TGG - chr6_4:52428022-52428041 Msa0990550:CDS 35.0%
AAATCTCTAGTCCAAAAACC+TGG - chr6_4:52429490-52429509 Msa0990550:intron 35.0%
GACTGAACTTGACTTAGTAT+TGG + chr6_4:52429539-52429558 None:intergenic 35.0%
AAATCTCTAGTCCAAAGATC+TGG - chr6_4:52429559-52429578 Msa0990550:intron 35.0%
TCTGGATTAAAACAACCATC+AGG - chr6_4:52429577-52429596 Msa0990550:intron 35.0%
CTGGATTAAAACAACCATCA+GGG - chr6_4:52429578-52429597 Msa0990550:intron 35.0%
TCAAAACTAGATCCTTCAAC+AGG + chr6_4:52429634-52429653 None:intergenic 35.0%
AATACAGTCTCAACATGTCT+CGG - chr6_4:52429654-52429673 Msa0990550:intron 35.0%
AAAGAATGATCAGCCACAAT+TGG - chr6_4:52429759-52429778 Msa0990550:intron 35.0%
TCTAATATGACAGACACTAC+TGG - chr6_4:52429799-52429818 Msa0990550:intron 35.0%
TGTAGTTGAACCTCAAGTAT+CGG - chr6_4:52429942-52429961 Msa0990550:intron 35.0%
CAGAAAATGAGAAAAACCTG+AGG + chr6_4:52430090-52430109 None:intergenic 35.0%
! ATTCTTTGGAGACACATTTC+CGG + chr6_4:52430409-52430428 None:intergenic 35.0%
TTAAGATGGCTGGTAAGTTA+TGG - chr6_4:52430532-52430551 Msa0990550:intron 35.0%
CTCTTATAGAGTAGATGCAT+TGG + chr6_4:52430720-52430739 None:intergenic 35.0%
! GATGAAGCTTTTGCCTTTTA+TGG - chr6_4:52430855-52430874 Msa0990550:CDS 35.0%
AAAGCTTCCAACTCCATAAA+AGG + chr6_4:52430871-52430890 None:intergenic 35.0%
AATACCTGAAAAGGCCAAAA+CGG + chr6_4:52430924-52430943 None:intergenic 35.0%
! TTTTTACGGATGAGGTTCTT+TGG - chr6_4:52430962-52430981 Msa0990550:CDS 35.0%
ATTGGATCAGAAATAGGTTG+TGG + chr6_4:52431345-52431364 None:intergenic 35.0%
!! AACCTATTTCTGATCCAATC+TGG - chr6_4:52431346-52431365 Msa0990550:intron 35.0%
CAAATTTCTTACCTCCAGAT+TGG + chr6_4:52431363-52431382 None:intergenic 35.0%
ACTTCAGACAATGATTTCAC+AGG + chr6_4:52431443-52431462 None:intergenic 35.0%
! AACTTTAGGAGATGCTAAAG+TGG + chr6_4:52431550-52431569 None:intergenic 35.0%
GGAACGAATAATCTAAGCAT+TGG - chr6_4:52431657-52431676 Msa0990550:intron 35.0%
CATCCTGAGGAAAGAAATAA+AGG + chr6_4:52431683-52431702 None:intergenic 35.0%
ATTTCTTTCCTCAGGATGAA+AGG - chr6_4:52431685-52431704 Msa0990550:intron 35.0%
GTTCACTACTCATCCAAATA+TGG - chr6_4:52431776-52431795 Msa0990550:intron 35.0%
!! TTTTTCAACCATAGCTCTCA+TGG + chr6_4:52431981-52432000 None:intergenic 35.0%
!! TTGTTGTGGATTGGGTGTAT+TGG - chr6_4:52422909-52422928 Msa0990550:CDS 40.0%
!!! GGGTGTATTGGTTTTGAGAT+CGG - chr6_4:52422921-52422940 Msa0990550:CDS 40.0%
!!! GTATTGGTTTTGAGATCGGT+TGG - chr6_4:52422925-52422944 Msa0990550:CDS 40.0%
!! GTGTTGGTTTGAACTTGTGT+TGG - chr6_4:52423051-52423070 Msa0990550:CDS 40.0%
GTTTGAACTTGTGTTGGGTT+TGG - chr6_4:52423057-52423076 Msa0990550:CDS 40.0%
GCAGGTTGTGAAAAATTGGT+TGG - chr6_4:52423170-52423189 Msa0990550:intron 40.0%
! ATTGGTTGGTGTCTTGGTTT+CGG - chr6_4:52423184-52423203 Msa0990550:intron 40.0%
! GAAATTGGTCTCTGTGTTAC+TGG - chr6_4:52423233-52423252 Msa0990550:intron 40.0%
AAAGTGCAGACAGAAATGCT+TGG - chr6_4:52423390-52423409 Msa0990550:CDS 40.0%
TGAATGGTGAATGACAGACT+TGG - chr6_4:52423452-52423471 Msa0990550:CDS 40.0%
! GTGAATGACAGACTTGGTAT+GGG - chr6_4:52423458-52423477 Msa0990550:CDS 40.0%
! TGAATGACAGACTTGGTATG+GGG - chr6_4:52423459-52423478 Msa0990550:CDS 40.0%
AGGGTTATGCATTGGACAAT+GGG + chr6_4:52424020-52424039 None:intergenic 40.0%
TAGGGTTATGCATTGGACAA+TGG + chr6_4:52424021-52424040 None:intergenic 40.0%
ATGGAGTGAAAATGTACCTG+CGG + chr6_4:52424077-52424096 None:intergenic 40.0%
AAGAAGAGTGGTACACGTTT+AGG - chr6_4:52424208-52424227 Msa0990550:intron 40.0%
!! GAAATGTGATTGACTCGTTC+CGG - chr6_4:52424230-52424249 Msa0990550:intron 40.0%
AAACCGGTAGTACTTTCAAC+CGG + chr6_4:52424252-52424271 None:intergenic 40.0%
AGGGAGGCCAACTATATAAA+TGG + chr6_4:52424966-52424985 None:intergenic 40.0%
! ATTTATATAGTTGGCCTCCC+TGG - chr6_4:52424965-52424984 Msa0990550:intron 40.0%
! CTAGATTTATGGTTTGGCCA+GGG + chr6_4:52424985-52425004 None:intergenic 40.0%
CACCACTCAGTCAATGATTT+CGG - chr6_4:52425189-52425208 Msa0990550:CDS 40.0%
! AACCGAAATCATTGACTGAG+TGG + chr6_4:52425194-52425213 None:intergenic 40.0%
!! GGTTTATAAGGCGTTGAACA+CGG + chr6_4:52425240-52425259 None:intergenic 40.0%
GGAGAAGAGTTTCACTTTGA+CGG + chr6_4:52425261-52425280 None:intergenic 40.0%
GGTGTTCCGAATGATTAGAA+GGG + chr6_4:52425320-52425339 None:intergenic 40.0%
TGGTGTTCCGAATGATTAGA+AGG + chr6_4:52425321-52425340 None:intergenic 40.0%
TCTAATCATTCGGAACACCA+TGG - chr6_4:52425321-52425340 Msa0990550:CDS 40.0%
AAATTCAGAGACGAATTCGG+TGG + chr6_4:52425577-52425596 None:intergenic 40.0%
CATAATCTTACCGACCAAGT+TGG + chr6_4:52425603-52425622 None:intergenic 40.0%
! GACCAATTTCGTAGTCTTAG+AGG - chr6_4:52425705-52425724 Msa0990550:CDS 40.0%
!! TGCCTCTAAGACTACGAAAT+TGG + chr6_4:52425710-52425729 None:intergenic 40.0%
! AATTTCGTAGTCTTAGAGGC+AGG - chr6_4:52425709-52425728 Msa0990550:CDS 40.0%
! ATTTCGTAGTCTTAGAGGCA+GGG - chr6_4:52425710-52425729 Msa0990550:CDS 40.0%
! ATAGATGTGTGTCACTGTCA+AGG - chr6_4:52426525-52426544 Msa0990550:CDS 40.0%
AACCCATATCGTGAGGAATT+TGG + chr6_4:52427074-52427093 None:intergenic 40.0%
CTTTGCTGATGACAATCAGT+TGG - chr6_4:52427134-52427153 Msa0990550:CDS 40.0%
ACGCTTGAAAGATCGAAAGT+TGG - chr6_4:52427233-52427252 Msa0990550:CDS 40.0%
TTGAAAGATCGAAAGTTGGC+AGG - chr6_4:52427237-52427256 Msa0990550:CDS 40.0%
CTCTTATCGACATAGCATTC+CGG + chr6_4:52427294-52427313 None:intergenic 40.0%
AATGCTATGTCGATAAGAGG+CGG - chr6_4:52427295-52427314 Msa0990550:CDS 40.0%
TTGTTATCGGCATAGTCTTC+CGG + chr6_4:52427462-52427481 None:intergenic 40.0%
AAGCGCCTCTTATCAGAATA+GGG + chr6_4:52427510-52427529 None:intergenic 40.0%
TAAGCGCCTCTTATCAGAAT+AGG + chr6_4:52427511-52427530 None:intergenic 40.0%
AGTCTACTATCTCGTCCATT+TGG + chr6_4:52427759-52427778 None:intergenic 40.0%
! CACGGTACACATTTTCTACA+GGG + chr6_4:52427854-52427873 None:intergenic 40.0%
! TCACGGTACACATTTTCTAC+AGG + chr6_4:52427855-52427874 None:intergenic 40.0%
ACTTCCTTGTTGCTGAATCT+AGG + chr6_4:52427882-52427901 None:intergenic 40.0%
TTGAAATCTGGGGATTATGC+TGG - chr6_4:52427921-52427940 Msa0990550:CDS 40.0%
TGCTAAGGATCTCGATTTCA+AGG - chr6_4:52427944-52427963 Msa0990550:CDS 40.0%
ACAAGAATGTTCCAGCTGAA+AGG - chr6_4:52428003-52428022 Msa0990550:CDS 40.0%
TTCCAGCTGAAAGGTCTAAA+CGG - chr6_4:52428012-52428031 Msa0990550:CDS 40.0%
CGGAAACTTATGGATAACAC+TGG - chr6_4:52428032-52428051 Msa0990550:CDS 40.0%
TATGGATAACACTGGTGCAA+AGG - chr6_4:52428040-52428059 Msa0990550:CDS 40.0%
TGGTTCCAAGCGTGAAATTA+TGG - chr6_4:52428067-52428086 Msa0990550:CDS 40.0%
GGTTCCAAGCGTGAAATTAT+GGG - chr6_4:52428068-52428087 Msa0990550:CDS 40.0%
!! TCGGGTTTTGATGATTTCAC+GGG + chr6_4:52428140-52428159 None:intergenic 40.0%
!! CTCGGGTTTTGATGATTTCA+CGG + chr6_4:52428141-52428160 None:intergenic 40.0%
! ACCTGACTTATCATTGGTCT+CGG + chr6_4:52428159-52428178 None:intergenic 40.0%
GACTGAACCTGACTTATCAT+TGG + chr6_4:52428165-52428184 None:intergenic 40.0%
AAATCTCTAGTCCAAAGACC+TGG - chr6_4:52428185-52428204 Msa0990550:intron 40.0%
AAATCTCCAGTCGAAAGATC+TGG - chr6_4:52428254-52428273 Msa0990550:intron 40.0%
TTTACTCCAGATCTTTCGAC+TGG + chr6_4:52428263-52428282 None:intergenic 40.0%
!! ACTTGACTTAGCATTGGCAT+CGG + chr6_4:52428297-52428316 None:intergenic 40.0%
GACTGAACTTGACTTAGCAT+TGG + chr6_4:52428303-52428322 None:intergenic 40.0%
! TTTAATCCTGGTCTTTGGAC+TGG + chr6_4:52428332-52428351 None:intergenic 40.0%
!!! CCTGATGGTTGTTTTAATCC+TGG + chr6_4:52428344-52428363 None:intergenic 40.0%
CCAGGATTAAAACAACCATC+AGG - chr6_4:52428341-52428360 Msa0990550:intron 40.0%
!!! ACAGGGATTGGTGTCATTTT+AGG + chr6_4:52428380-52428399 None:intergenic 40.0%
CGAAACTAGATCCTTCAACA+GGG + chr6_4:52428397-52428416 None:intergenic 40.0%
TCGAAACTAGATCCTTCAAC+AGG + chr6_4:52428398-52428417 None:intergenic 40.0%
TTTAGACTCTTGAGACAGTG+AGG + chr6_4:52428444-52428463 None:intergenic 40.0%
TCACTGTCTCAAGAGTCTAA+AGG - chr6_4:52428443-52428462 Msa0990550:intron 40.0%
AGGCAATGATCAGCTACAAT+TGG - chr6_4:52428463-52428482 Msa0990550:intron 40.0%
TGTCATATTAGAGCCTGTTG+AGG + chr6_4:52428495-52428514 None:intergenic 40.0%
TCTAATATGACACACACTGC+TGG - chr6_4:52428503-52428522 Msa0990550:intron 40.0%
AAACATGATGCTGATGCATC+AGG + chr6_4:52428614-52428633 None:intergenic 40.0%
CTATAGCTCCAGTACAAAGT+CGG - chr6_4:52428819-52428838 Msa0990550:intron 40.0%
TAAGATGCATCGCAACTGTT+TGG - chr6_4:52428877-52428896 Msa0990550:intron 40.0%
ACTCTACTATCTCGTCCATT+TGG + chr6_4:52428962-52428981 None:intergenic 40.0%
GGCTTCATTCCAGAAGAATT+TGG + chr6_4:52428989-52429008 None:intergenic 40.0%
! ACTTTCATAGGTTGAACCAC+CGG + chr6_4:52429010-52429029 None:intergenic 40.0%
TTAGACTCTGCGACTTTCAT+AGG + chr6_4:52429022-52429041 None:intergenic 40.0%
GTCGCAGAGTCTAAGAAAAA+TGG - chr6_4:52429028-52429047 Msa0990550:intron 40.0%
! CACGACACACATTTTCTACA+GGG + chr6_4:52429057-52429076 None:intergenic 40.0%
! TCACGACACACATTTTCTAC+AGG + chr6_4:52429058-52429077 None:intergenic 40.0%
ACTTCCTTATTGCTGAATCG+AGG + chr6_4:52429085-52429104 None:intergenic 40.0%
AATAAGGAAGTTCCAGCTGT+AGG - chr6_4:52429094-52429113 Msa0990550:intron 40.0%
! TTCAATTTGGAACCTACAGC+TGG + chr6_4:52429109-52429128 None:intergenic 40.0%
! ATTATGCTGGTGCTAAGGAT+CGG - chr6_4:52427934-52427953 Msa0990550:CDS 40.0%
GGTTTCAAGGTGGGAAAAAT+GGG - chr6_4:52429160-52429179 Msa0990550:intron 40.0%
! TTCTGGCTGAAAGTTCTACA+AGG - chr6_4:52429206-52429225 Msa0990550:intron 40.0%
AACACTAGTCCAAAGGATCA+CGG - chr6_4:52429241-52429260 Msa0990550:intron 40.0%
TCCAAAGGATCACGGTTTAA+AGG - chr6_4:52429249-52429268 Msa0990550:intron 40.0%
CCAAAGGATCACGGTTTAAA+GGG - chr6_4:52429250-52429269 Msa0990550:intron 40.0%
ACAAGAATGTTCCAGCTGAA+AGG - chr6_4:52428003-52428022 Msa0990550:CDS 40.0%
TTCCAGCTGAAAGGTCTAAA+CGG - chr6_4:52428012-52428031 Msa0990550:CDS 40.0%
CGGAAACTTATGGATAACAC+TGG - chr6_4:52428032-52428051 Msa0990550:CDS 40.0%
TATGGATAACACTGGTGCAA+AGG - chr6_4:52428040-52428059 Msa0990550:CDS 40.0%
TGGTTCCAAGCGTGATATTA+TGG - chr6_4:52429372-52429391 Msa0990550:intron 40.0%
GGTTCCAAGCGTGATATTAT+GGG - chr6_4:52429373-52429392 Msa0990550:intron 40.0%
!! TCGGGTTTTGATGATTTCAC+GGG + chr6_4:52428140-52428159 None:intergenic 40.0%
!! CTCGGGTTTTGATGATTTCA+CGG + chr6_4:52428141-52428160 None:intergenic 40.0%
! ACCTGACTTATCATTGGTCT+CGG + chr6_4:52428159-52428178 None:intergenic 40.0%
GACTGAACCTGACTTATCAT+TGG + chr6_4:52428165-52428184 None:intergenic 40.0%
!! ACTTGACTTAGTATTGGCCA+CGG + chr6_4:52429533-52429552 None:intergenic 40.0%
CTAGATCCTTCAACAGGTAT+TGG + chr6_4:52429628-52429647 None:intergenic 40.0%
CTTGTGATGTTCTTTGCCTT+TGG + chr6_4:52429722-52429741 None:intergenic 40.0%
TGTCATATTAGAGCCTGTTG+AGG + chr6_4:52428495-52428514 None:intergenic 40.0%
TTTGAACTCCTATCTGAACG+TGG - chr6_4:52429910-52429929 Msa0990550:intron 40.0%
TATCTAGACCACGTTCAGAT+AGG + chr6_4:52429921-52429940 None:intergenic 40.0%
GTTTCAGTACTAACCTCTGA+AGG + chr6_4:52429991-52430010 None:intergenic 40.0%
TGCAGACGAAAGTTCTCAAT+CGG - chr6_4:52430017-52430036 Msa0990550:intron 40.0%
! TCTCATTTTCTGACTTCCCT+AGG - chr6_4:52430098-52430117 Msa0990550:intron 40.0%
ATACCTGTCTGTCTTACATG+TGG - chr6_4:52430225-52430244 Msa0990550:intron 40.0%
!! TGTAGGCTTTGAAGAGACAT+TGG - chr6_4:52430251-52430270 Msa0990550:intron 40.0%
!! CAACCACTTCTGTTTCTATC+CGG - chr6_4:52430387-52430406 Msa0990550:intron 40.0%
TTTCCGGATAGAAACAGAAG+TGG + chr6_4:52430393-52430412 None:intergenic 40.0%
TCATTACCCTGAACCTTTCT+TGG - chr6_4:52430455-52430474 Msa0990550:intron 40.0%
AGTAGATGCATTGGAAACAC+AGG + chr6_4:52430711-52430730 None:intergenic 40.0%
! GCTTTTGCCTTTTATGGAGT+TGG - chr6_4:52430861-52430880 Msa0990550:CDS 40.0%
TAGAATGTGAAACACTGCGA+TGG + chr6_4:52430896-52430915 None:intergenic 40.0%
!! AATACCGTTTTGGCCTTTTC+AGG - chr6_4:52430917-52430936 Msa0990550:CDS 40.0%
!!! AGATGGGCCTGTCATTTTTA+CGG - chr6_4:52430948-52430967 Msa0990550:CDS 40.0%
ACCTCATCCGTAAAAATGAC+AGG + chr6_4:52430958-52430977 None:intergenic 40.0%
!!! TGAGGTTCTTTGGTTTTGTG+AGG - chr6_4:52430972-52430991 Msa0990550:CDS 40.0%
!! TGAATCTGTCGACTCACTAT+CGG + chr6_4:52431031-52431050 None:intergenic 40.0%
CTCCAGATTGGATCAGAAAT+AGG + chr6_4:52431351-52431370 None:intergenic 40.0%
!! CTATTTCTGATCCAATCTGG+AGG - chr6_4:52431349-52431368 Msa0990550:intron 40.0%
! CTGGTTCTCAACAAAAGCTT+TGG - chr6_4:52431492-52431511 Msa0990550:intron 40.0%
! AGCTTTGGCAAAATCATCAC+CGG - chr6_4:52431507-52431526 Msa0990550:intron 40.0%
AGCATCTCCTAAAGTTCTTG+AGG - chr6_4:52431554-52431573 Msa0990550:CDS 40.0%
CTTGTCTCCTCAAGAACTTT+AGG + chr6_4:52431564-52431583 None:intergenic 40.0%
ATGTCTGCATCAAGCACATT+AGG + chr6_4:52431594-52431613 None:intergenic 40.0%
TGATTCAAAGAGAAGCTGTG+TGG - chr6_4:52431613-52431632 Msa0990550:intron 40.0%
CCAAAATACTGGAAACTCTC+TGG + chr6_4:52431639-52431658 None:intergenic 40.0%
! CCAGAGAGTTTCCAGTATTT+TGG - chr6_4:52431636-52431655 Msa0990550:intron 40.0%
! TGGCCTTTATTTCTTTCCTC+AGG - chr6_4:52431677-52431696 Msa0990550:intron 40.0%
!! TTTCTTGGGAGCATTGTAGA+AGG + chr6_4:52432022-52432041 None:intergenic 40.0%
TGAACCAGCATCATGTATCT+TGG + chr6_4:52432186-52432205 None:intergenic 40.0%
! ATCTACCTGTGTGCTTGTTG+TGG - chr6_4:52422895-52422914 Msa0990550:CDS 45.0%
!! CTGTGTGCTTGTTGTGGATT+GGG - chr6_4:52422901-52422920 Msa0990550:CDS 45.0%
AGATAGAGATTGCGGTGGTT+TGG - chr6_4:52422959-52422978 Msa0990550:intron 45.0%
! TTCTGGCCGGATGTTGATTA+AGG - chr6_4:52423010-52423029 Msa0990550:intron 45.0%
TGCAGACAGAAATGCTTGGT+TGG - chr6_4:52423394-52423413 Msa0990550:CDS 45.0%
GCAGACAGAAATGCTTGGTT+GGG - chr6_4:52423395-52423414 Msa0990550:CDS 45.0%
CAGACAGAAATGCTTGGTTG+GGG - chr6_4:52423396-52423415 Msa0990550:CDS 45.0%
! GGTGAATGACAGACTTGGTA+TGG - chr6_4:52423457-52423476 Msa0990550:CDS 45.0%
! GAATGACAGACTTGGTATGG+GGG - chr6_4:52423460-52423479 Msa0990550:CDS 45.0%
!! GGAATCAAAATGGTAACGGC+AGG + chr6_4:52423553-52423572 None:intergenic 45.0%
!!! AGTTTTAAAAACCGGACCGG+TGG - chr6_4:52423634-52423653 Msa0990550:intron 45.0%
GTTGAACCGCATGATGAAAC+CGG - chr6_4:52423713-52423732 Msa0990550:intron 45.0%
CCGAGTCATCCGATTTAATC+CGG + chr6_4:52423735-52423754 None:intergenic 45.0%
CCGGATTAAATCGGATGACT+CGG - chr6_4:52423732-52423751 Msa0990550:CDS 45.0%
! ATGCATTGGACAATGGGCTT+GGG + chr6_4:52424014-52424033 None:intergenic 45.0%
! TATGCATTGGACAATGGGCT+TGG + chr6_4:52424015-52424034 None:intergenic 45.0%
GCACTGAGCAGAGTTGAAAA+TGG + chr6_4:52424096-52424115 None:intergenic 45.0%
!! GGAAGAAGAAGTATTGACGG+AGG + chr6_4:52424118-52424137 None:intergenic 45.0%
!! GTTCCGGTTGAAAGTACTAC+CGG - chr6_4:52424246-52424265 Msa0990550:intron 45.0%
!! TGAAAGTACTACCGGTTTGC+CGG - chr6_4:52424254-52424273 Msa0990550:intron 45.0%
! TTTGTTGTGAACCGGCAAAC+CGG + chr6_4:52424268-52424287 None:intergenic 45.0%
!! TTGCCGGTTCACAACAAAAC+CGG - chr6_4:52424270-52424289 Msa0990550:intron 45.0%
GATCGGTTGTGCATTTAACC+CGG + chr6_4:52424315-52424334 None:intergenic 45.0%
ATTCAAACCGCTTAGGCTAC+CGG - chr6_4:52424344-52424363 Msa0990550:intron 45.0%
!! TTTTAAAAACCGGACCGGAC+CGG + chr6_4:52424395-52424414 None:intergenic 45.0%
! CCTAGATTTATGGTTTGGCC+AGG + chr6_4:52424986-52425005 None:intergenic 45.0%
CCTGGCCAAACCATAAATCT+AGG - chr6_4:52424983-52425002 Msa0990550:intron 45.0%
! AGTGAGGTGTCTAAAGATGG+TGG + chr6_4:52425169-52425188 None:intergenic 45.0%
! GTGAGTGAGGTGTCTAAAGA+TGG + chr6_4:52425172-52425191 None:intergenic 45.0%
TGGTGCATAGATCGATATCG+CGG + chr6_4:52426842-52426861 None:intergenic 45.0%
TCCTGCCTGAAATCATCGAA+TGG + chr6_4:52427027-52427046 None:intergenic 45.0%
TCAGCAAAACCCATATCGTG+AGG + chr6_4:52427081-52427100 None:intergenic 45.0%
! TCAGCAAAGTGTGCTGATGT+GGG + chr6_4:52427123-52427142 None:intergenic 45.0%
! ATCAGCAAAGTGTGCTGATG+TGG + chr6_4:52427124-52427143 None:intergenic 45.0%
GCTGATGTGTGATGTGATGA+GGG + chr6_4:52427195-52427214 None:intergenic 45.0%
TGCTGATGTGTGATGTGATG+AGG + chr6_4:52427196-52427215 None:intergenic 45.0%
!! AGAGGCATTTACCACGTCAA+AGG - chr6_4:52427268-52427287 Msa0990550:CDS 45.0%
CGGAATGCTATGTCGATAAG+AGG - chr6_4:52427292-52427311 Msa0990550:CDS 45.0%
GCGGTTACCTGATCAAATAC+CGG - chr6_4:52427314-52427333 Msa0990550:CDS 45.0%
CGGTTACCTGATCAAATACC+GGG - chr6_4:52427315-52427334 Msa0990550:CDS 45.0%
TAGTGTCCCGGTATTTGATC+AGG + chr6_4:52427324-52427343 None:intergenic 45.0%
AAACCTTTGGGCGTTTGATG+CGG + chr6_4:52427366-52427385 None:intergenic 45.0%
CTCCTTACCACATCAAAAGC+CGG - chr6_4:52427440-52427459 Msa0990550:CDS 45.0%
! TTCCGGCTTTTGATGTGGTA+AGG + chr6_4:52427445-52427464 None:intergenic 45.0%
! TAGTCTTCCGGCTTTTGATG+TGG + chr6_4:52427450-52427469 None:intergenic 45.0%
AAGTCTTCCGGTGTTTGTAG+TGG + chr6_4:52427534-52427553 None:intergenic 45.0%
CACTTATCGGCAAAGTCTTC+CGG + chr6_4:52427546-52427565 None:intergenic 45.0%
ACGGAACGTAGTGTTCCAAA+TGG - chr6_4:52427741-52427760 Msa0990550:CDS 45.0%
TGCTGAATCTAGGAGCTTCA+CGG + chr6_4:52427872-52427891 None:intergenic 45.0%
AGCTCCTAGATTCAGCAACA+AGG - chr6_4:52427875-52427894 Msa0990550:CDS 45.0%
TTCCGTTTAGACCTTTCAGC+TGG + chr6_4:52428017-52428036 None:intergenic 45.0%
AACACTGGTGCAAAGGATGA+TGG - chr6_4:52428047-52428066 Msa0990550:CDS 45.0%
! CCTGACTTATCATTGGTCTC+GGG + chr6_4:52428158-52428177 None:intergenic 45.0%
!! ACCTGACTTAGCATTGGTCT+CGG + chr6_4:52428228-52428247 None:intergenic 45.0%
GACTGAACCTGACTTAGCAT+TGG + chr6_4:52428234-52428253 None:intergenic 45.0%
!! CTTGACTTAGCATTGGCATC+GGG + chr6_4:52428296-52428315 None:intergenic 45.0%
AAATCTCCAGTCCAAAGACC+AGG - chr6_4:52428323-52428342 Msa0990550:intron 45.0%
AAAACAACCATCAGGGTGTG+TGG - chr6_4:52428349-52428368 Msa0990550:intron 45.0%
ATGACACCAATCCCTGTTGA+AGG - chr6_4:52428383-52428402 Msa0990550:intron 45.0%
CTAGATCCTTCAACAGGGAT+TGG + chr6_4:52428392-52428411 None:intergenic 45.0%
CAATTGGTGAATGCCTCAAC+AGG - chr6_4:52428479-52428498 Msa0990550:intron 45.0%
!! AGTTGAACCTCAAGTATCGG+AGG - chr6_4:52428667-52428686 Msa0990550:intron 45.0%
TGCAGACGAAAGTTCTCAGT+CGG - chr6_4:52428739-52428758 Msa0990550:intron 45.0%
GGAGCTATAGCAGGAATAGT+TGG + chr6_4:52428809-52428828 None:intergenic 45.0%
CTTTGTACTGGAGCTATAGC+AGG + chr6_4:52428818-52428837 None:intergenic 45.0%
!! TTTGACTGCCGACTTTGTAC+TGG + chr6_4:52428830-52428849 None:intergenic 45.0%
ATGCATCGCAACTGTTTGGA+AGG - chr6_4:52428881-52428900 Msa0990550:intron 45.0%
ACGGAACGTAGTGTTCCAAA+TGG - chr6_4:52427741-52427760 Msa0990550:CDS 45.0%
AGCTCCTCGATTCAGCAATA+AGG - chr6_4:52429078-52429097 Msa0990550:intron 45.0%
! TTATGCTGGTGCTAAGGATC+GGG - chr6_4:52427935-52427954 Msa0990550:CDS 45.0%
GGGTTTCAAGGTGGGAAAAA+TGG - chr6_4:52429159-52429178 Msa0990550:intron 45.0%
TGGGGATAACACTAGTCCAA+AGG - chr6_4:52429234-52429253 Msa0990550:intron 45.0%
CCCTTTAAACCGTGATCCTT+TGG + chr6_4:52429253-52429272 None:intergenic 45.0%
TTCCGTTTAGACCTTTCAGC+TGG + chr6_4:52428017-52428036 None:intergenic 45.0%
AACACTGGTGCAAAGGATGA+TGG - chr6_4:52428047-52428066 Msa0990550:CDS 45.0%
! CCTGACTTATCATTGGTCTC+GGG + chr6_4:52428158-52428177 None:intergenic 45.0%
!! CTTGACTTAGTATTGGCCAC+GGG + chr6_4:52429532-52429551 None:intergenic 45.0%
AAAACAACCATCAGGGTGTG+TGG - chr6_4:52428349-52428368 Msa0990550:intron 45.0%
!! ACAGGTATTGGTGTCCTTCT+AGG + chr6_4:52429616-52429635 None:intergenic 45.0%
AGGACACCAATACCTGTTGA+AGG - chr6_4:52429619-52429638 Msa0990550:intron 45.0%
TTTGGACTCTTGAGACAGTG+AGG + chr6_4:52429704-52429723 None:intergenic 45.0%
TCACTGTCTCAAGAGTCCAA+AGG - chr6_4:52429703-52429722 Msa0990550:intron 45.0%
! GTTGAGGCATTCACCAATTG+TGG + chr6_4:52428479-52428498 None:intergenic 45.0%
CAATTGGTGAATGCCTCAAC+AGG - chr6_4:52428479-52428498 Msa0990550:intron 45.0%
AAACTTGACGCTGATGCATC+TGG + chr6_4:52429892-52429911 None:intergenic 45.0%
CGAAAGTTCTCAATCGGAAG+TGG - chr6_4:52430023-52430042 Msa0990550:intron 45.0%
TTCTCAATCGGAAGTGGAGA+TGG - chr6_4:52430029-52430048 Msa0990550:intron 45.0%
AGAGACAACTAAGTTGCCTC+AGG - chr6_4:52430071-52430090 Msa0990550:intron 45.0%
GACAGGTATCTGCAACAAGT+AGG + chr6_4:52430214-52430233 None:intergenic 45.0%
TGTCTTACATGTGGCGATGT+AGG - chr6_4:52430234-52430253 Msa0990550:intron 45.0%
GTAAAGCTTGTGCACTGCAT+AGG - chr6_4:52430289-52430308 Msa0990550:intron 45.0%
GTCAGTCCAAGAAAGGTTCA+GGG + chr6_4:52430464-52430483 None:intergenic 45.0%
AGATGTGGTCAGTCCAAGAA+AGG + chr6_4:52430471-52430490 None:intergenic 45.0%
ACAGGAGCAATGGAAGTTCA+TGG + chr6_4:52430811-52430830 None:intergenic 45.0%
ATGGCAAAACACAGGAGCAA+TGG + chr6_4:52430821-52430840 None:intergenic 45.0%
!!! GCCTGTCATTTTTACGGATG+AGG - chr6_4:52430954-52430973 Msa0990550:CDS 45.0%
! GGTGAAGTCGATTTCAGCAA+AGG - chr6_4:52431291-52431310 Msa0990550:intron 45.0%
GGATAATAGGGGAAGTTTGC+TGG - chr6_4:52431473-52431492 Msa0990550:intron 45.0%
GGACAAGTGGCACAATAATC+CGG + chr6_4:52431529-52431548 None:intergenic 45.0%
GAGATGCTAAAGTGGACAAG+TGG + chr6_4:52431542-52431561 None:intergenic 45.0%
AAACGTCACCTTTCATCCTG+AGG + chr6_4:52431696-52431715 None:intergenic 45.0%
AATAAGCAGGGTTCGCTACA+TGG + chr6_4:52431834-52431853 None:intergenic 45.0%
CCAGCATCATGTATCTTGGA+TGG + chr6_4:52432182-52432201 None:intergenic 45.0%
CCATCCAAGATACATGATGC+TGG - chr6_4:52432179-52432198 Msa0990550:CDS 45.0%
CCAATCCACAACAAGCACAC+AGG + chr6_4:52422903-52422922 None:intergenic 50.0%
!! CCTGTGTGCTTGTTGTGGAT+TGG - chr6_4:52422900-52422919 Msa0990550:CDS 50.0%
CTGTGGTGTTTGATTCTGGC+CGG - chr6_4:52422997-52423016 Msa0990550:intron 50.0%
ACAGAAATGCTTGGTTGGGG+TGG - chr6_4:52423399-52423418 Msa0990550:CDS 50.0%
AATGCTTGGTTGGGGTGGAA+AGG - chr6_4:52423404-52423423 Msa0990550:CDS 50.0%
!! AAAATGGTAACGGCAGGCGT+GGG + chr6_4:52423547-52423566 None:intergenic 50.0%
GTACTGGGTCACTGAGTCAT+TGG - chr6_4:52423671-52423690 Msa0990550:intron 50.0%
TGAGTCATTGGTCGAACCAC+TGG - chr6_4:52423683-52423702 Msa0990550:intron 50.0%
GAGTCATTGGTCGAACCACT+GGG - chr6_4:52423684-52423703 Msa0990550:intron 50.0%
GAGTGAAAATGTACCTGCGG+CGG + chr6_4:52424074-52424093 None:intergenic 50.0%
TCTTCTTCCATAGCTTCGCG+TGG + chr6_4:52424195-52424214 None:intergenic 50.0%
GCGAAGCTATGGAAGAAGAG+TGG - chr6_4:52424196-52424215 Msa0990550:intron 50.0%
! GATTTATGGTTTGGCCAGGG+AGG + chr6_4:52424982-52425001 None:intergenic 50.0%
! CATTGACTGAGTGGTGAGTG+AGG + chr6_4:52425185-52425204 None:intergenic 50.0%
! CTTAGAGGCAGGGACCATTT+TGG - chr6_4:52425720-52425739 Msa0990550:CDS 50.0%
ACCTTATCGCAAGAGAGTCG+AGG - chr6_4:52426797-52426816 Msa0990550:CDS 50.0%
ACCTCGACTCTCTTGCGATA+AGG + chr6_4:52426801-52426820 None:intergenic 50.0%
GCCATTCGATGATTTCAGGC+AGG - chr6_4:52427023-52427042 Msa0990550:CDS 50.0%
GCTGATGTGGGATGTGATGT+GGG + chr6_4:52427111-52427130 None:intergenic 50.0%
TGCTGATGTGGGATGTGATG+TGG + chr6_4:52427112-52427131 None:intergenic 50.0%
GTCACCGCTATGCTGATGAT+TGG - chr6_4:52427169-52427188 Msa0990550:CDS 50.0%
AGGGCCAATCATCAGCATAG+CGG + chr6_4:52427176-52427195 None:intergenic 50.0%
AGTTGGCAGGCTTCTGTAAG+AGG - chr6_4:52427250-52427269 Msa0990550:CDS 50.0%
GCATTTACCACGTCAAAGGC+CGG - chr6_4:52427272-52427291 Msa0990550:CDS 50.0%
CTCTTGTCACTGTAGTGTCC+CGG + chr6_4:52427336-52427355 None:intergenic 50.0%
AAGTCTTCTGGCGTTTGAGG+TGG + chr6_4:52427408-52427427 None:intergenic 50.0%
GCAAAGTCTTCTGGCGTTTG+AGG + chr6_4:52427411-52427430 None:intergenic 50.0%
GCGCTTACCACTACAAACAC+CGG - chr6_4:52427524-52427543 Msa0990550:CDS 50.0%
TTGACTGCCGACGTTGTACT+GGG + chr6_4:52427611-52427630 None:intergenic 50.0%
TTTGACTGCCGACGTTGTAC+TGG + chr6_4:52427612-52427631 None:intergenic 50.0%
! TGGGGATTATGCTGGTGCTA+AGG - chr6_4:52427929-52427948 Msa0990550:CDS 50.0%
GGCTCCCATAATTTCACGCT+TGG + chr6_4:52428075-52428094 None:intergenic 50.0%
CGTGAAATTATGGGAGCCGT+AGG - chr6_4:52428077-52428096 Msa0990550:CDS 50.0%
CCCGAGACCAATGATAAGTC+AGG - chr6_4:52428155-52428174 Msa0990550:intron 50.0%
!! CCTGACTTAGCATTGGTCTC+GGG + chr6_4:52428227-52428246 None:intergenic 50.0%
CATGATGCTGATGCATCAGG+TGG + chr6_4:52428611-52428630 None:intergenic 50.0%
AGTGGAGATTGATGCTCCTG+CGG - chr6_4:52428694-52428713 Msa0990550:intron 50.0%
GTTTCAGTACTAACCTCCGC+AGG + chr6_4:52428713-52428732 None:intergenic 50.0%
CGAAAGTTCTCAGTCGGAAG+TGG - chr6_4:52428745-52428764 Msa0990550:intron 50.0%
TTCTCAGTCGGAAGTGGAGA+TGG - chr6_4:52428751-52428770 Msa0990550:intron 50.0%
!! TTCTTCTGGAATGAAGCCGG+TGG - chr6_4:52428991-52429010 Msa0990550:intron 50.0%
! TGGGGATTATGCTGGTGCTA+AGG - chr6_4:52427929-52427948 Msa0990550:CDS 50.0%
! TATGCTGGTGCTAAGGATCG+GGG - chr6_4:52429139-52429158 Msa0990550:intron 50.0%
TGCTAAGGATCGGGGTTTCA+AGG - chr6_4:52429147-52429166 Msa0990550:intron 50.0%
TAAGGATCGGGGTTTCAAGG+TGG - chr6_4:52429150-52429169 Msa0990550:intron 50.0%
AAGGATCGGGGTTTCAAGGT+GGG - chr6_4:52429151-52429170 Msa0990550:intron 50.0%
GGCTCCCATAATATCACGCT+TGG + chr6_4:52429380-52429399 None:intergenic 50.0%
CGTGATATTATGGGAGCCGT+AGG - chr6_4:52429382-52429401 Msa0990550:intron 50.0%
CCCGAGACCAATGATAAGTC+AGG - chr6_4:52428155-52428174 Msa0990550:intron 50.0%
CTCACTGTCTCGACATGTCT+CGG - chr6_4:52429678-52429697 Msa0990550:intron 50.0%
! ACTGCTGCTTCCGATACTTG+AGG + chr6_4:52429955-52429974 None:intergenic 50.0%
!! TCAAGTATCGGAAGCAGCAG+TGG - chr6_4:52429954-52429973 Msa0990550:intron 50.0%
GGAGATTGATGCTCCTTCAG+AGG - chr6_4:52429975-52429994 Msa0990550:intron 50.0%
TCGCCACATGTAAGACAGAC+AGG + chr6_4:52430231-52430250 None:intergenic 50.0%
GGTCAGTCCAAGAAAGGTTC+AGG + chr6_4:52430465-52430484 None:intergenic 50.0%
AGCTCTCATGGCAAGGTCAT+TGG + chr6_4:52431969-52431988 None:intergenic 50.0%
TGACCTTGCCATGAGAGCTA+TGG - chr6_4:52431970-52431989 Msa0990550:intron 50.0%
CAACCATAGCTCTCATGGCA+AGG + chr6_4:52431976-52431995 None:intergenic 50.0%
! AGAGATTGCGGTGGTTTGGC+CGG - chr6_4:52422963-52422982 Msa0990550:intron 55.0%
! CGGTGGTTTGGCCGGTTTAA+CGG - chr6_4:52422971-52422990 Msa0990550:intron 55.0%
! TGGTTTGGCCGGTTTAACGG+CGG - chr6_4:52422974-52422993 Msa0990550:intron 55.0%
GCGGCTGTGGTGTTTGATTC+TGG - chr6_4:52422993-52423012 Msa0990550:intron 55.0%
! ACAGACTTGGTATGGGGGCA+AGG - chr6_4:52423465-52423484 Msa0990550:CDS 55.0%
!! AGTGGTGGTGGTGATGGAGT+GGG - chr6_4:52423492-52423511 Msa0990550:CDS 55.0%
!! CAAAATGGTAACGGCAGGCG+TGG + chr6_4:52423548-52423567 None:intergenic 55.0%
TGGTCGAACCACTGGGTCAT+TGG - chr6_4:52423691-52423710 Msa0990550:intron 55.0%
CGGTTCAACCAATGACCCAG+TGG + chr6_4:52423702-52423721 None:intergenic 55.0%
ACACTGTCCACGCGAAGCTA+TGG - chr6_4:52424185-52424204 Msa0990550:intron 55.0%
!!! CGGCCGGTTTTGTTGTGAAC+CGG + chr6_4:52424276-52424295 None:intergenic 55.0%
ACAAAACCGGCCGAGTCATC+CGG - chr6_4:52424283-52424302 Msa0990550:intron 55.0%
GCATTTAACCCGGCGCTAAC+CGG + chr6_4:52424305-52424324 None:intergenic 55.0%
TAGCATTCCGGCCTTTGACG+TGG + chr6_4:52427282-52427301 None:intergenic 55.0%
CGGGACACTACAGTGACAAG+AGG - chr6_4:52427334-52427353 Msa0990550:CDS 55.0%
TTGGGCGTTTGATGCGGCAA+AGG + chr6_4:52427360-52427379 None:intergenic 55.0%
TTGCCGCATCAAACGCCCAA+AGG - chr6_4:52427360-52427379 Msa0990550:CDS 55.0%
!! TAGGGTTTTGGCGCTCGATG+TGG + chr6_4:52427492-52427511 None:intergenic 55.0%
GTTGGTCCCAGCGTTTGATG+CGG + chr6_4:52427573-52427592 None:intergenic 55.0%
GGGGCTAACGCAGGAATAGT+TGG + chr6_4:52427591-52427610 None:intergenic 55.0%
CGTTAGCCCCAGTACAACGT+CGG - chr6_4:52427601-52427620 Msa0990550:CDS 55.0%
TGACTGCCGACGTTGTACTG+GGG + chr6_4:52427610-52427629 None:intergenic 55.0%
CCCGAGACCAATGCTAAGTC+AGG - chr6_4:52428224-52428243 Msa0990550:intron 55.0%
TCAGGTGGTGCAGATGCAAG+TGG + chr6_4:52428596-52428615 None:intergenic 55.0%
ACTGCAGCCTCCGATACTTG+AGG + chr6_4:52428677-52428696 None:intergenic 55.0%
!! TCAAGTATCGGAGGCTGCAG+TGG - chr6_4:52428676-52428695 Msa0990550:intron 55.0%
GTCACCGTGTCAAAACCGCT+GGG - chr6_4:52428782-52428801 Msa0990550:intron 55.0%
!! TGGTCCCAGCGGTTTTGACA+CGG + chr6_4:52428789-52428808 None:intergenic 55.0%
GCAGGAATAGTTGGTCCCAG+CGG + chr6_4:52427582-52427601 None:intergenic 55.0%
GGTGTGTGGCTTCACCTAGA+AGG - chr6_4:52429599-52429618 Msa0990550:intron 55.0%
CGAGACATGTCGAGACAGTG+AGG + chr6_4:52429680-52429699 None:intergenic 55.0%
CACCACAGCCGCCGTTAAAC+CGG + chr6_4:52422985-52423004 None:intergenic 60.0%
GTATGGGGGCAAGGTGAGAG+TGG - chr6_4:52423474-52423493 Msa0990550:CDS 60.0%
!! GGTGAGAGTGGTGGTGGTGA+TGG - chr6_4:52423486-52423505 Msa0990550:CDS 60.0%
!! GAGTGGTGGTGGTGATGGAG+TGG - chr6_4:52423491-52423510 Msa0990550:CDS 60.0%
!! GTGGTGGTGATGGAGTGGGA+AGG - chr6_4:52423496-52423515 Msa0990550:CDS 60.0%
!! TGGTGATGGAGTGGGAAGGC+AGG - chr6_4:52423500-52423519 Msa0990550:CDS 60.0%
!! GGTGATGGAGTGGGAAGGCA+GGG - chr6_4:52423501-52423520 Msa0990550:CDS 60.0%
! GTGATGGAGTGGGAAGGCAG+GGG - chr6_4:52423502-52423521 Msa0990550:CDS 60.0%
!! GTCGACTCGGCAAGGGTACT+GGG - chr6_4:52423656-52423675 Msa0990550:intron 60.0%
CCGTGAACCGGTAGCCTAAG+CGG + chr6_4:52424354-52424373 None:intergenic 60.0%
!! CCGCTTAGGCTACCGGTTCA+CGG - chr6_4:52424351-52424370 Msa0990550:intron 60.0%
CGTTGTACTGGGGCTAACGC+AGG + chr6_4:52427600-52427619 None:intergenic 60.0%
GGTGAAGCCACACACCCTGA+TGG + chr6_4:52428359-52428378 None:intergenic 60.0%
GGAGATTGATGCTCCTGCGG+AGG - chr6_4:52428697-52428716 Msa0990550:intron 60.0%
CGTCACCGTGTCAAAACCGC+TGG - chr6_4:52428781-52428800 Msa0990550:intron 60.0%
GGTGAAGCCACACACCCTGA+TGG + chr6_4:52428359-52428378 None:intergenic 60.0%
TGGGGGCAAGGTGAGAGTGG+TGG - chr6_4:52423477-52423496 Msa0990550:CDS 65.0%
GGGCAAGGTGAGAGTGGTGG+TGG - chr6_4:52423480-52423499 Msa0990550:CDS 65.0%
AACCGGACCGGTGGTCGACT+CGG - chr6_4:52423643-52423662 Msa0990550:intron 65.0%
!! ACCGGTGGTCGACTCGGCAA+GGG - chr6_4:52423649-52423668 Msa0990550:intron 65.0%
ACCCTTGCCGAGTCGACCAC+CGG + chr6_4:52423653-52423672 None:intergenic 65.0%
!! GGTCGACTCGGCAAGGGTAC+TGG - chr6_4:52423655-52423674 Msa0990550:intron 65.0%
TCTCAGATGCTTGCCGCCGC+AGG - chr6_4:52424058-52424077 Msa0990550:CDS 65.0%
! CGCTAACCGGATGACTCGGC+CGG + chr6_4:52424292-52424311 None:intergenic 65.0%
CCGGCGCTAACCGGATGACT+CGG + chr6_4:52424296-52424315 None:intergenic 65.0%
CCGAGTCATCCGGTTAGCGC+CGG - chr6_4:52424293-52424312 Msa0990550:intron 65.0%
CGAGTCATCCGGTTAGCGCC+GGG - chr6_4:52424294-52424313 Msa0990550:intron 65.0%
!! CTACCGGTTCACGGTCCGAC+CGG - chr6_4:52424360-52424379 Msa0990550:intron 65.0%
GAACCGGTCGGACCGTGAAC+CGG + chr6_4:52424366-52424385 None:intergenic 65.0%
AAAAACCGGACCGGACCGGC+CGG + chr6_4:52424391-52424410 None:intergenic 65.0%
! GGCCGGTTTAACGGCGGCTG+TGG - chr6_4:52422980-52422999 Msa0990550:intron 70.0%
TGCCGAGTCGACCACCGGTC+CGG + chr6_4:52423648-52423667 None:intergenic 70.0%
!! GACCGGTGGTCGACTCGGCA+AGG - chr6_4:52423648-52423667 Msa0990550:intron 70.0%
!! CACGGTCCGACCGGTTCGAC+CGG - chr6_4:52424369-52424388 Msa0990550:intron 70.0%
!! GTCCGACCGGTTCGACCGGC+CGG - chr6_4:52424373-52424392 Msa0990550:intron 75.0%
GACCGGCCGGTCGAACCGGT+CGG + chr6_4:52424378-52424397 None:intergenic 75.0%
!! ACCGGTTCGACCGGCCGGTC+CGG - chr6_4:52424378-52424397 Msa0990550:intron 75.0%
ACCGGACCGGCCGGTCGAAC+CGG + chr6_4:52424382-52424401 None:intergenic 75.0%
TTCGACCGGCCGGTCCGGTC+CGG - chr6_4:52424383-52424402 Msa0990550:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 52422867 52432223 52422867 ID=Msa0990550;Name=Msa0990550
chr6_4 mRNA 52422867 52432223 52422867 ID=Msa0990550-mRNA-1;Parent=Msa0990550;Name=Msa0990550-mRNA-1;_AED=0.53;_eAED=0.53;_QI=0|0|0|0.09|1|1|11|0|1573
chr6_4 exon 52432017 52432223 52432017 ID=Msa0990550-mRNA-1:exon:10999;Parent=Msa0990550-mRNA-1
chr6_4 exon 52431820 52431916 52431820 ID=Msa0990550-mRNA-1:exon:10998;Parent=Msa0990550-mRNA-1
chr6_4 exon 52431709 52431740 52431709 ID=Msa0990550-mRNA-1:exon:10997;Parent=Msa0990550-mRNA-1
chr6_4 exon 52431535 52431621 52431535 ID=Msa0990550-mRNA-1:exon:10996;Parent=Msa0990550-mRNA-1
chr6_4 exon 52430823 52431026 52430823 ID=Msa0990550-mRNA-1:exon:10995;Parent=Msa0990550-mRNA-1
chr6_4 exon 52424998 52428129 52424998 ID=Msa0990550-mRNA-1:exon:10994;Parent=Msa0990550-mRNA-1
chr6_4 exon 52424780 52424865 52424780 ID=Msa0990550-mRNA-1:exon:10993;Parent=Msa0990550-mRNA-1
chr6_4 exon 52423720 52424151 52423720 ID=Msa0990550-mRNA-1:exon:10992;Parent=Msa0990550-mRNA-1
chr6_4 exon 52423384 52423608 52423384 ID=Msa0990550-mRNA-1:exon:10991;Parent=Msa0990550-mRNA-1
chr6_4 exon 52423041 52423165 52423041 ID=Msa0990550-mRNA-1:exon:10990;Parent=Msa0990550-mRNA-1
chr6_4 exon 52422867 52422961 52422867 ID=Msa0990550-mRNA-1:exon:10989;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52432017 52432223 52432017 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52431820 52431916 52431820 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52431709 52431740 52431709 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52431535 52431621 52431535 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52430823 52431026 52430823 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52424998 52428129 52424998 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52424780 52424865 52424780 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52423720 52424151 52423720 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52423384 52423608 52423384 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52423041 52423165 52423041 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
chr6_4 CDS 52422867 52422961 52422867 ID=Msa0990550-mRNA-1:cds;Parent=Msa0990550-mRNA-1
Gene Sequence

>Msa0990550

ATGAGGAAACCTAGATCTAAAAGGATGCATCTACCTGTGTGCTTGTTGTGGATTGGGTGTATTGGTTTTGAGATCGGTTGGAGTTCGATTTTAGATAGAGATTGCGGTGGTTTGGCCGGTTTAACGGCGGCTGTGGTGTTTGATTCTGGCCGGATGTTGATTAAGGATTTGATGTTGAAATCTTGTGTTGGTTTGAACTTGTGTTGGGTTGTGAAAAATTGGTTGGTGTCTTGGTTTCGGCTGTGTAGTGTTGTTGATGTTTTTGTGAAATTGGTCTCTGTGTTACTGGATTTTTCTTTTGCAGGTTGTATTTATAGTGAACAATTTGATTATAGGACTTGGTATGGGGGCAAGGTGAGAGTGGTGGTGGTGATGGAGTGGGAAGGCAGGGGAAATGCTTGTCAGACAGTGCCCACGCCTGCCATGCTTGCCGCCGCAGGTACATTTTCACTCCATTTTCAACTCTGCTCAGTGCCTCCGTCAATACTTCTTCTTCCTTGCTTCTTCTTAAAATATGTCTTTCTTCTTCGTTTCTTCTTCTCACACACTGTCCACGCGAAGCTATGGAAGAAGAGTGGTACACGTTTAGGAAATGTGATTGACTCGTTCCGGTTGAAAGTACTACCGATAGGAGATTTTCAAAACAATTATAGAAGTGGTTGGGATGTTATACCGTTCAATGATGATATGCCATTCGATGATTTCAGGCAGGAACCATTGAACTTGAACTTCGATTACCAAATTCCTCACGATATGGGTTTTGCTGATGATTGGCCCACATCACATCCCACATCAGCACACTTTGCTGATGACAATCAGTTGGAATATCAAAGGGGTCACCGCTATGCTGATGATTGGCCCTCATCACATCACACATCAGCACACTATGCTGATAAGAAACGCTTGAAAGATCGAAAGTTGGCAGGCTTCTGTAAGAGGCATTTACCACGTCAAAGGCCGGAATGCTATGTCGATAAGAGGCGGTTACCTGATCAAATACCGGGACACTACAGTGACAAGAGGCCTTTGCCGCATCAAACGCCCAAAGGTTTTGCTGATAAAAGAAACTTACCACCTCAAACGCCAGAAGACTTTGCTGATATAAGCTCCTTACCACATCAAAAGCCGGAAGACTATGCCGATAACAAGTGCTTACCACATCGAGCGCCAAAACCCTATTCTGATAAGAGGCGCTTACCACTACAAACACCGGAAGACTTTGCCGATAAGTGCTCACCGCATCAAACGCTGGGACCAACTATTCCTGCGTTAGCCCCAGTACAACGTCGGCAGTCAAATATAGTATGCTGTAAAATTTGTAATGTTACGATGCCTGACAAATGTTTCGAAGAACATAATAATGGAAAGAAACATCGAAAGAAATTAGAAGAACTACATGAGCAATCAACGGAACGTAGTGTTCCAAATGGACGAGATAGTAGACTATTTCCAAATTCTTCTGGAATGAATCCGGTAGTTCAACCTATGAAAGTCGCAGAATCTAAGAAAAATGGGCACCCTGTAGAAAATGTGTACCGTGAAGCTCCTAGATTCAGCAACAAGGAAGTTCCAGCTGTAGATTCTAAATTGAAATCTGGGGATTATGCTGGTGCTAAGGATCTCGATTTCAAGGTTGAAAATGTGAAAAATGAAGCTCCCATTTTAAAGCACAAGAATGTTCCAGCTGAAAGGTCTAAACGGAAACTTATGGATAACACTGGTGCAAAGGATGATGGTTCCAAGCGTGAAATTATGGGAGCCGTAGGAGATAAATACATGAAGATGGATAATGGGGTAAGAAGACCCGTGAAATCATCAAAACCCGAGACCAATGATAAGTCAGGTTCAGTCAAATCTCTAGTCCAAAGACCTGGATTAAAATCATCAAAACCCGAGACCAATGCTAAGTCAGGTTCAGTCAAATCTCCAGTCGAAAGATCTGGAGTAAAATCATCAAAACCCGATGCCAATGCTAAGTCAAGTTCAGTCAAATCTCCAGTCCAAAGACCAGGATTAAAACAACCATCAGGGTGTGTGGCTTCACCTAAAATGACACCAATCCCTGTTGAAGGATCTAGTTTCGAAATACAGTCTCGACATGTCTCAGCCTCACTGTCTCAAGAGTCTAAAGGCAATGATCAGCTACAATTGGTGAATGCCTCAACAGGCTCTAATATGACACACACTGCTGGTTCTATGACTAACAACCAAACAGAAGTTGTGAATTCTGATTTTGCAGCAATCAAAGTTGTTACAGAACCACTTGCATCTGCACCACCTGATGCATCAGCATCATGTTTTGAACTCCTAACTGAACATGGTCTACATACTGAAGTTGAACCTCAAGTATCGGAGGCTGCAGTGGAGATTGATGCTCCTGCGGAGGTTAGTACTGAAACTGAAGCTGCAGACGAAAGTTCTCAGTCGGAAGTGGAGATGGATGTTCTCGTCACCGTGTCAAAACCGCTGGGACCAACTATTCCTGCTATAGCTCCAGTACAAAGTCGGCAGTCAAATATAATATGCTGTAAAATTTGTAATGTTAAGATGCATCGCAACTGTTTGGAAGGACATAATAATGGAAAGAAACATCGAATGTTATTAAAATCAACGGAACGTAGTGTTCCAAATGGACGAGATAGTAGAGTAGTTCCAAATTCTTCTGGAATGAAGCCGGTGGTTCAACCTATGAAAGTCGCAGAGTCTAAGAAAAATGGGCACCCTGTAGAAAATGTGTGTCGTGAAGCTCCTCGATTCAGCAATAAGGAAGTTCCAGCTGTAGGTTCCAAATTGAAATTTGGGGATTATGCTGGTGCTAAGGATCGGGGTTTCAAGGTGGGAAAAATGGGTCCTAGTTTCAAGCAGAAAAATGTTCTGGCTGAAAGTTCTACAAGGAAACTTGGGGATAACACTAGTCCAAAGGATCACGGTTTAAAGGGAGAAAATTTGAAAAATGAAGCTACCATTTTAAAGCACAAGAATGTTCCAGCTGAAAGGTCTAAACGGAAACTTATGGATAACACTGGTGCAAAGGATGATGGTTCCAAGCGTGATATTATGGGAGCCGTAGGAGATAAATACATGAAGATGGATAATGGGGTAAGAAGACCCGTGAAATCATCAAAACCCGAGACCAATGATAAGTCAGGTTCAGTCAAATCTCTAGTCCAAAAACCTGGATTAAAATCATCAAAACCCGTGGCCAATACTAAGTCAAGTTCAGTCAAATCTCTAGTCCAAAGATCTGGATTAAAACAACCATCAGGGTGTGTGGCTTCACCTAGAAGGACACCAATACCTGTTGAAGGATCTAGTTTTGAAATACAGTCTCAACATGTCTCGGCCTCACTGTCTCGACATGTCTCGGCCTCACTGTCTCAAGAGTCCAAAGGCAAAGAACATCACAAGTTTCAAAATATTGTGGAAAAGAATGATCAGCCACAATTGGTGAATGCCTCAACAGGCTCTAATATGACAGACACTACTGGTTCTATGACTAACAAGCAAACAGAAGTTGTGAATTCTGATTATGCAGCAGTCAAAGTTGTTACAGAACCAGATGCATCAGCGTCAAGTTTTGAACTCCTATCTGAACGTGGTCTAGATACTGTAGTTGAACCTCAAGTATCGGAAGCAGCAGTGGAGATTGATGCTCCTTCAGAGGTTAGTACTGAAACTGAAGCTGCAGACGAAAGTTCTCAATCGGAAGTGGAGATGGATGTTCTCGTCACTGTGTCAGAGACAACTAAGTTGCCTCAGATACCTGTCTGTCTTACATGTGGCGATGTAGGCTTTGAAGAGACATTGGTGTCTTGCAACAAATGTAAAGCTTGTGCACTGCATAGGTATTGTTTAGATGGGCCTGTCATTTTTACGGATGAGGTTCTTTGGTTTTGTGAGGACTGCGAGCCAGATGTAGTAGTCATAAATGACTCCGATAGTGAGTCGACAGATTCAGACGACGAGACTACAAATTCAGATATTGAGATTACTGATTCAGAAAAAGGTGAAGTAGTAGTCATAAATGACTCTGATAGTGAGTCGACAGATTCAGACGACGAGACTACAGATTCAGATATTGAGATTACTGATTCAGAAAAAGGTGAAGTAGTAGTCATAAATGACTCTGATAGTGAGTCGACAGATTCAGACGACGAGACTACAGATTCAGATATTGAGATTACTGATTCAGAAAAAGGTGAAGTCGATTTCAGCAAAGGATGTGCAACTGCTGTTACTATTGCTGATCCACAACCTATTTCTGATCCAATCTGGAGGGGAAGTTTGCTGGTTCTCAACAAAAGCTTTGGCAAAATCATCACCGGATTATTGTGCCACTTGTCCACTTTAGCATCTCCTAAAGTTCTTGAGGAGACAAGACATCTACCTAATGTGCTTGATGCAGACATGATTCAAAGAGAAGCTGTGTGGCCAGAGAGTTTCCAGTATTTTGGAACGAATAATCTAAGCATTGGCCTTTATTTCTTTCCTCAGGATGAAAGGGATGAGAGATATTTTGACCAGCTAGTTGATGAAATGATTTCCAATGACCTTGCCATGAGAGCTATGGTTGAAAAAGCTGAGCTTTTAATATTTCCTTCTACAATGCTCCCAAGAAAATACAAGAGGTTTCAATCAAAGTATTACTTGTGGGGAGTTTATAGAAGAAGTCAAGTACCATCCAAGATACATGATGCTGGTTCAAGAAATGAAGAGTCTTAA
Protein sequence

>Msa0990550

MRKPRSKRMHLPVCLLWIGCIGFEIGWSSILDRDCGGLAGLTAAVVFDSGRMLIKDLMLKSCVGLNLCWVVKNWLVSWFRLCSVVDVFVKLVSVLLDFSFAGCIYSEQFDYRTWYGGKVRVVVVMEWEGRGNACQTVPTPAMLAAAGTFSLHFQLCSVPPSILLLPCFFLKYVFLLRFFFSHTVHAKLWKKSGTRLGNVIDSFRLKVLPIGDFQNNYRSGWDVIPFNDDMPFDDFRQEPLNLNFDYQIPHDMGFADDWPTSHPTSAHFADDNQLEYQRGHRYADDWPSSHHTSAHYADKKRLKDRKLAGFCKRHLPRQRPECYVDKRRLPDQIPGHYSDKRPLPHQTPKGFADKRNLPPQTPEDFADISSLPHQKPEDYADNKCLPHRAPKPYSDKRRLPLQTPEDFADKCSPHQTLGPTIPALAPVQRRQSNIVCCKICNVTMPDKCFEEHNNGKKHRKKLEELHEQSTERSVPNGRDSRLFPNSSGMNPVVQPMKVAESKKNGHPVENVYREAPRFSNKEVPAVDSKLKSGDYAGAKDLDFKVENVKNEAPILKHKNVPAERSKRKLMDNTGAKDDGSKREIMGAVGDKYMKMDNGVRRPVKSSKPETNDKSGSVKSLVQRPGLKSSKPETNAKSGSVKSPVERSGVKSSKPDANAKSSSVKSPVQRPGLKQPSGCVASPKMTPIPVEGSSFEIQSRHVSASLSQESKGNDQLQLVNASTGSNMTHTAGSMTNNQTEVVNSDFAAIKVVTEPLASAPPDASASCFELLTEHGLHTEVEPQVSEAAVEIDAPAEVSTETEAADESSQSEVEMDVLVTVSKPLGPTIPAIAPVQSRQSNIICCKICNVKMHRNCLEGHNNGKKHRMLLKSTERSVPNGRDSRVVPNSSGMKPVVQPMKVAESKKNGHPVENVCREAPRFSNKEVPAVGSKLKFGDYAGAKDRGFKVGKMGPSFKQKNVLAESSTRKLGDNTSPKDHGLKGENLKNEATILKHKNVPAERSKRKLMDNTGAKDDGSKRDIMGAVGDKYMKMDNGVRRPVKSSKPETNDKSGSVKSLVQKPGLKSSKPVANTKSSSVKSLVQRSGLKQPSGCVASPRRTPIPVEGSSFEIQSQHVSASLSRHVSASLSQESKGKEHHKFQNIVEKNDQPQLVNASTGSNMTDTTGSMTNKQTEVVNSDYAAVKVVTEPDASASSFELLSERGLDTVVEPQVSEAAVEIDAPSEVSTETEAADESSQSEVEMDVLVTVSETTKLPQIPVCLTCGDVGFEETLVSCNKCKACALHRYCLDGPVIFTDEVLWFCEDCEPDVVVINDSDSESTDSDDETTNSDIEITDSEKGEVVVINDSDSESTDSDDETTDSDIEITDSEKGEVVVINDSDSESTDSDDETTDSDIEITDSEKGEVDFSKGCATAVTIADPQPISDPIWRGSLLVLNKSFGKIITGLLCHLSTLASPKVLEETRHLPNVLDADMIQREAVWPESFQYFGTNNLSIGLYFFPQDERDERYFDQLVDEMISNDLAMRAMVEKAELLIFPSTMLPRKYKRFQSKYYLWGVYRRSQVPSKIHDAGSRNEES*