Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992480 | XP_003588865.1 | 82.550 | 149 | 8 | 2 | 1 | 131 | 1 | 149 | 7.09e-75 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992480 | G7I884 | 82.550 | 149 | 8 | 2 | 1 | 131 | 1 | 149 | 3.39e-75 | 231 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006000 | Msa0992480 | 0.808270 | 3.362890e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992480 | MtrunA17_Chr1g0150121 | 82.550 | 149 | 8 | 2 | 1 | 131 | 1 | 149 | 6.52e-79 | 231 |
| Msa0992480 | MtrunA17_Chr3g0136861 | 33.529 | 170 | 61 | 4 | 1 | 119 | 1 | 169 | 1.66e-16 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 50 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCTATTGTTGTTGATTC+TGG | 0.208831 | 6_4:+61311626 | None:intergenic |
| TTCTCACCATTTGGGTTCTT+AGG | 0.223638 | 6_4:-61307304 | Msa0992480:three_prime_UTR |
| CTGTCTGCGTTTGAGTTTCA+TGG | 0.247458 | 6_4:-61307340 | Msa0992480:three_prime_UTR |
| TGAAATACGAACATTCAAAA+AGG | 0.266282 | 6_4:+61311459 | None:intergenic |
| TTCAGCGTCCTTGTTGCTTT+GGG | 0.275461 | 6_4:-61307649 | Msa0992480:CDS |
| AGATGAATGCTTATTGCTTA+TGG | 0.285315 | 6_4:-61307508 | Msa0992480:three_prime_UTR |
| GTGATGCGTCAATAATTAAA+TGG | 0.297952 | 6_4:-61307608 | Msa0992480:exon |
| AATTTAATGTTCTCACCATT+TGG | 0.301117 | 6_4:-61307313 | Msa0992480:three_prime_UTR |
| GGAATTCAGGTAATTGAGTT+TGG | 0.301722 | 6_4:+61311570 | None:intergenic |
| TATTGCTTATGGCTTGCGAC+TGG | 0.317936 | 6_4:-61307497 | Msa0992480:three_prime_UTR |
| GAAGTCGTTCCAGTCTCTTT+TGG | 0.333344 | 6_4:+61310985 | None:intergenic |
| GTCAATAATTAAATGGCAAC+TGG | 0.334356 | 6_4:-61307601 | Msa0992480:three_prime_UTR |
| ATTTAATGTTCTCACCATTT+GGG | 0.340283 | 6_4:-61307312 | Msa0992480:three_prime_UTR |
| TCTGATAGAGCAAGGAATTC+AGG | 0.352555 | 6_4:+61311557 | None:intergenic |
| CACCATTTGGGTTCTTAGGT+TGG | 0.364969 | 6_4:-61307300 | Msa0992480:three_prime_UTR |
| AATATACCTTCACTCAAATC+TGG | 0.367127 | 6_4:+61310963 | None:intergenic |
| GTCACGTTCTCTGTTTCATT+TGG | 0.368600 | 6_4:+61311656 | None:intergenic |
| CTTTCTCTCTTCACTAGAAT+AGG | 0.378897 | 6_4:+61311697 | None:intergenic |
| AGAGAGAAAGAGAAAGAATA+TGG | 0.380703 | 6_4:-61311684 | Msa0992480:exon |
| GGGAGTGTCGCAAGATGATC+AGG | 0.382472 | 6_4:+61311533 | None:intergenic |
| GTTCAGCGTCCTTGTTGCTT+TGG | 0.391508 | 6_4:-61307650 | Msa0992480:CDS |
| ATTGCTTATGGCTTGCGACT+GGG | 0.406029 | 6_4:-61307496 | Msa0992480:three_prime_UTR |
| CAAAAGTCATTATCTAACTT+TGG | 0.413615 | 6_4:+61307402 | None:intergenic |
| AGAGAGAATGAGCACGTTGA+AGG | 0.421510 | 6_4:+61311507 | None:intergenic |
| TCGAATTGTTCTTCGGAAGA+TGG | 0.432800 | 6_4:+61309699 | None:intergenic |
| TACAAACAGCAGCTCATAGC+TGG | 0.435981 | 6_4:+61307533 | None:intergenic |
| TCAACTACGTATATATTGTA+TGG | 0.445908 | 6_4:-61307427 | Msa0992480:three_prime_UTR |
| AGCAGAACAGTGGCAAGATA+TGG | 0.460848 | 6_4:-61309769 | Msa0992480:intron |
| AATTTGATCGAATTGTTCTT+CGG | 0.466862 | 6_4:+61309692 | None:intergenic |
| AAGTGTGTGCCAAAAGAGAC+TGG | 0.467228 | 6_4:-61310994 | Msa0992480:CDS |
| TACAATATATACGTAGTTGA+AGG | 0.499424 | 6_4:+61307430 | None:intergenic |
| ATTCGATCAAATTGATTCCA+AGG | 0.503194 | 6_4:-61309682 | Msa0992480:CDS |
| TCAGCGTCCTTGTTGCTTTG+GGG | 0.510939 | 6_4:-61307648 | Msa0992480:CDS |
| GAATGAGCACGTTGAAGGAG+TGG | 0.521754 | 6_4:+61311512 | None:intergenic |
| GGCCAACCTAAGAACCCAAA+TGG | 0.527569 | 6_4:+61307298 | None:intergenic |
| TGCAGTATATGTGAACTACA+TGG | 0.528259 | 6_4:-61307691 | Msa0992480:intron |
| GGTAGAGGTGAGTTTGGCGA+GGG | 0.533143 | 6_4:+61311481 | None:intergenic |
| TTGCTTATGGCTTGCGACTG+GGG | 0.534371 | 6_4:-61307495 | Msa0992480:three_prime_UTR |
| AGGAGCAGACTGGTCAAAAG+AGG | 0.536792 | 6_4:-61309728 | Msa0992480:CDS |
| CATGAAACTCAAACGCAGAC+AGG | 0.542569 | 6_4:+61307341 | None:intergenic |
| AATGAGCACGTTGAAGGAGT+GGG | 0.547922 | 6_4:+61311513 | None:intergenic |
| GGGTAGAGGTGAGTTTGGCG+AGG | 0.549628 | 6_4:+61311480 | None:intergenic |
| TGGGGCGACTCATCAAAGCT+TGG | 0.551107 | 6_4:-61307630 | Msa0992480:CDS |
| CGACTTCCAGATTTGAGTGA+AGG | 0.560270 | 6_4:-61310969 | Msa0992480:intron |
| AGAACAGTGGCAAGATATGG+TGG | 0.633543 | 6_4:-61309766 | Msa0992480:CDS |
| GGTTATTTCAAGCAGAACAG+TGG | 0.634126 | 6_4:-61309779 | Msa0992480:intron |
| GATCAGGGTCTGATAGAGCA+AGG | 0.637548 | 6_4:+61311549 | None:intergenic |
| TCAATAATTAAATGGCAACT+GGG | 0.658227 | 6_4:-61307600 | Msa0992480:three_prime_UTR |
| GGAGTGTCGCAAGATGATCA+GGG | 0.666656 | 6_4:+61311534 | None:intergenic |
| TGAGTCGCCCCAAAGCAACA+AGG | 0.677678 | 6_4:+61307641 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTTTTTTTTTTTTTC+TGG | - | chr6_4:61307682-61307701 | Msa0992480:CDS | 10.0% |
| !!! | ATCTTAGTTTTTTTTTTTTA+GGG | + | chr6_4:61308981-61309000 | None:intergenic | 10.0% |
| !!! | TATCTTAGTTTTTTTTTTTT+AGG | + | chr6_4:61308982-61309001 | None:intergenic | 10.0% |
| !!! | AATAAAGTTACAATTTTTGA+AGG | + | chr6_4:61307612-61307631 | None:intergenic | 15.0% |
| !! | TAATAAATATATCTCAAAGA+TGG | + | chr6_4:61309780-61309799 | None:intergenic | 15.0% |
| !!! | TTTTGAAGGAAAACATTAAT+GGG | + | chr6_4:61307598-61307617 | None:intergenic | 20.0% |
| !!! | TTTTTGAAGGAAAACATTAA+TGG | + | chr6_4:61307599-61307618 | None:intergenic | 20.0% |
| !! | ATGCAACAAAATTAAAAACA+TGG | + | chr6_4:61307796-61307815 | None:intergenic | 20.0% |
| !! | TGTTGCATACAAATAAAAAA+GGG | - | chr6_4:61308736-61308755 | Msa0992480:intron | 20.0% |
| !! | ATGTTAAGAATTTGATTGAA+TGG | - | chr6_4:61309132-61309151 | Msa0992480:intron | 20.0% |
| !! | TGTTAAGAATTTGATTGAAT+GGG | - | chr6_4:61309133-61309152 | Msa0992480:intron | 20.0% |
| !! | TCATGTGTTTGAAAAAAAAA+TGG | - | chr6_4:61309225-61309244 | Msa0992480:intron | 20.0% |
| !! | CTACCAAAATACATAAAATA+TGG | + | chr6_4:61309557-61309576 | None:intergenic | 20.0% |
| !! | TTATGATCTCTATCTAATTT+AGG | - | chr6_4:61309587-61309606 | Msa0992480:intron | 20.0% |
| !! | TATGATCTCTATCTAATTTA+GGG | - | chr6_4:61309588-61309607 | Msa0992480:intron | 20.0% |
| !! | ACATAATTAGTTAATTCGTT+TGG | - | chr6_4:61310089-61310108 | Msa0992480:intron | 20.0% |
| !!! | AAAGGTAAAATTTGAGTTAT+TGG | - | chr6_4:61310288-61310307 | Msa0992480:intron | 20.0% |
| !! | ATAAATTTCCATTGTAGTTA+TGG | - | chr6_4:61310369-61310388 | Msa0992480:intron | 20.0% |
| !!! | AAGTATAGTTATTTCAGTTA+TGG | - | chr6_4:61310722-61310741 | Msa0992480:intron | 20.0% |
| !! | GTAAACAAAGCAATTATATA+TGG | + | chr6_4:61311248-61311267 | None:intergenic | 20.0% |
| !!! | TATATAATTGCTTTGTTTAC+TGG | - | chr6_4:61311248-61311267 | Msa0992480:intron | 20.0% |
| !!! | CCTATAAATATTCTAGATTT+TGG | + | chr6_4:61311280-61311299 | None:intergenic | 20.0% |
| !!! | CCAAAATCTAGAATATTTAT+AGG | - | chr6_4:61311277-61311296 | Msa0992480:intron | 20.0% |
| ! | GAAATACGAACATTCAAAAA+GGG | + | chr6_4:61307568-61307587 | None:intergenic | 25.0% |
| ! | TGAAATACGAACATTCAAAA+AGG | + | chr6_4:61307569-61307588 | None:intergenic | 25.0% |
| ! | ACAACAACAAAAACGAAAAT+GGG | + | chr6_4:61307660-61307679 | None:intergenic | 25.0% |
| ! | AACAACAACAAAAACGAAAA+TGG | + | chr6_4:61307661-61307680 | None:intergenic | 25.0% |
| ! | TGAATGTAATCATATGTGTA+CGG | + | chr6_4:61307872-61307891 | None:intergenic | 25.0% |
| !!! | TTGTTCAAGTTTTGACATTT+GGG | - | chr6_4:61307953-61307972 | Msa0992480:intron | 25.0% |
| !! | CAAACTATTTTCATATAAGC+TGG | - | chr6_4:61308158-61308177 | Msa0992480:intron | 25.0% |
| !! | TTATCATAAGTCCTTTTCAT+TGG | - | chr6_4:61308364-61308383 | Msa0992480:intron | 25.0% |
| ! | ACACTTAGAATGAAATATCA+TGG | + | chr6_4:61308415-61308434 | None:intergenic | 25.0% |
| ! | GTGTTGCATACAAATAAAAA+AGG | - | chr6_4:61308735-61308754 | Msa0992480:intron | 25.0% |
| ! | CATACAAATAAAAAAGGGAA+TGG | - | chr6_4:61308741-61308760 | Msa0992480:intron | 25.0% |
| !!! | TTTTTTTTTTAGGGCAATAG+CGG | + | chr6_4:61308972-61308991 | None:intergenic | 25.0% |
| ! | AATTTGATCGAATTGTTCTT+CGG | + | chr6_4:61309336-61309355 | None:intergenic | 25.0% |
| ! | AATAACAGAAAACAGAGTTT+GGG | + | chr6_4:61309503-61309522 | None:intergenic | 25.0% |
| ! | CCAAAATACATAAAATATGG+AGG | + | chr6_4:61309554-61309573 | None:intergenic | 25.0% |
| !! | CCTCCATATTTTATGTATTT+TGG | - | chr6_4:61309551-61309570 | Msa0992480:intron | 25.0% |
| !!! | ATTGAGTTTTAGCAAAAGTT+CGG | - | chr6_4:61309810-61309829 | Msa0992480:intron | 25.0% |
| ! | TAATGAGAAAATGAAAGCTA+AGG | + | chr6_4:61310148-61310167 | None:intergenic | 25.0% |
| !!! | TTTTGTTTAAAGCAGTTTAG+TGG | + | chr6_4:61310180-61310199 | None:intergenic | 25.0% |
| !! | ATTGTTGGTTGAATTATTCA+AGG | - | chr6_4:61310263-61310282 | Msa0992480:intron | 25.0% |
| !! | TTGTTGGTTGAATTATTCAA+GGG | - | chr6_4:61310264-61310283 | Msa0992480:intron | 25.0% |
| ! | AAATGTAATGATAAAGCTTG+TGG | - | chr6_4:61310557-61310576 | Msa0992480:intron | 25.0% |
| ! | AATGTAATGATAAAGCTTGT+GGG | - | chr6_4:61310558-61310577 | Msa0992480:intron | 25.0% |
| ! | CTACTCATTATTAATTGAGT+TGG | + | chr6_4:61310650-61310669 | None:intergenic | 25.0% |
| ! | CAACTCAATTAATAATGAGT+AGG | - | chr6_4:61310648-61310667 | Msa0992480:intron | 25.0% |
| !! | ATAGTTATTTCAGTTATGGA+CGG | - | chr6_4:61310726-61310745 | Msa0992480:intron | 25.0% |
| ! | TCAATAATTAAATGGCAACT+GGG | - | chr6_4:61311425-61311444 | Msa0992480:intron | 25.0% |
| ! | TACAATATATACGTAGTTGA+AGG | + | chr6_4:61311598-61311617 | None:intergenic | 25.0% |
| ! | TCAACTACGTATATATTGTA+TGG | - | chr6_4:61311598-61311617 | Msa0992480:CDS | 25.0% |
| ! | CAAAAGTCATTATCTAACTT+TGG | + | chr6_4:61311626-61311645 | None:intergenic | 25.0% |
| ! | AATTTAATGTTCTCACCATT+TGG | - | chr6_4:61311712-61311731 | Msa0992480:five_prime_UTR | 25.0% |
| ! | ATTTAATGTTCTCACCATTT+GGG | - | chr6_4:61311713-61311732 | Msa0992480:five_prime_UTR | 25.0% |
| AGAGAGAAAGAGAAAGAATA+TGG | - | chr6_4:61307341-61307360 | Msa0992480:three_prime_UTR | 30.0% | |
| !! | GATTCTATTGTTGTTGATTC+TGG | + | chr6_4:61307402-61307421 | None:intergenic | 30.0% |
| ! | ATTTAAAGGCATGGTCATTT+GGG | + | chr6_4:61307738-61307757 | None:intergenic | 30.0% |
| !! | GTTGTTCAAGTTTTGACATT+TGG | - | chr6_4:61307952-61307971 | Msa0992480:intron | 30.0% |
| !! | TGTTCAAGTTTTGACATTTG+GGG | - | chr6_4:61307954-61307973 | Msa0992480:intron | 30.0% |
| ! | GATTTTGTGTTCAACAGAAT+AGG | - | chr6_4:61308006-61308025 | Msa0992480:intron | 30.0% |
| AATATACCTTCACTCAAATC+TGG | + | chr6_4:61308065-61308084 | None:intergenic | 30.0% | |
| GTTACTTATCCAAACAAACA+GGG | + | chr6_4:61308110-61308129 | None:intergenic | 30.0% | |
| AGTTACTTATCCAAACAAAC+AGG | + | chr6_4:61308111-61308130 | None:intergenic | 30.0% | |
| AAAAGGACTTATGATAAGCA+TGG | + | chr6_4:61308361-61308380 | None:intergenic | 30.0% | |
| TAATAGCTCAACCAATGAAA+AGG | + | chr6_4:61308378-61308397 | None:intergenic | 30.0% | |
| CATAAAAGAAAGACAGAACT+TGG | + | chr6_4:61308553-61308572 | None:intergenic | 30.0% | |
| ATAATATCAGTAGTAAGCTG+TGG | - | chr6_4:61308604-61308623 | Msa0992480:intron | 30.0% | |
| TGAGTCAACGGTATATAAAA+AGG | - | chr6_4:61308711-61308730 | Msa0992480:intron | 30.0% | |
| ACAAATAAAAAAGGGAATGG+AGG | - | chr6_4:61308744-61308763 | Msa0992480:intron | 30.0% | |
| !! | AGATTTTGAGGGAAAAAACT+GGG | + | chr6_4:61309022-61309041 | None:intergenic | 30.0% |
| ! | TATAGCATAGCAGATTTTGA+GGG | + | chr6_4:61309033-61309052 | None:intergenic | 30.0% |
| AAGAATTTGATTGAATGGGT+TGG | - | chr6_4:61309137-61309156 | Msa0992480:intron | 30.0% | |
| !! | CTTTTTGTTTAACACTCTGT+TGG | - | chr6_4:61309171-61309190 | Msa0992480:intron | 30.0% |
| TCAAAATGTAAGACACGTAT+GGG | + | chr6_4:61309202-61309221 | None:intergenic | 30.0% | |
| TTCAAAATGTAAGACACGTA+TGG | + | chr6_4:61309203-61309222 | None:intergenic | 30.0% | |
| ! | ATTCGATCAAATTGATTCCA+AGG | - | chr6_4:61309343-61309362 | Msa0992480:intron | 30.0% |
| AAACAGAGTTTGGGTAATAA+GGG | + | chr6_4:61309494-61309513 | None:intergenic | 30.0% | |
| AAAACAGAGTTTGGGTAATA+AGG | + | chr6_4:61309495-61309514 | None:intergenic | 30.0% | |
| CAATAACAGAAAACAGAGTT+TGG | + | chr6_4:61309504-61309523 | None:intergenic | 30.0% | |
| GCAACGAAGTTAAAAATCAT+AGG | - | chr6_4:61309717-61309736 | Msa0992480:CDS | 30.0% | |
| GGTTATATGAGATTTGAATG+TGG | - | chr6_4:61309738-61309757 | Msa0992480:CDS | 30.0% | |
| TATATGAGATTTGAATGTGG+AGG | - | chr6_4:61309741-61309760 | Msa0992480:CDS | 30.0% | |
| TAATACGATTATACGACTGA+AGG | - | chr6_4:61309890-61309909 | Msa0992480:intron | 30.0% | |
| AATACGATTATACGACTGAA+GGG | - | chr6_4:61309891-61309910 | Msa0992480:intron | 30.0% | |
| !! | TAGCGAGTTTTGATGTTTAT+CGG | - | chr6_4:61309956-61309975 | Msa0992480:intron | 30.0% |
| TTCATTTAGCAAGTGATCTT+AGG | - | chr6_4:61310122-61310141 | Msa0992480:intron | 30.0% | |
| GTTGAATTATTCAAGGGAAA+AGG | - | chr6_4:61310270-61310289 | Msa0992480:intron | 30.0% | |
| TACTAGTTAGATTTCCTGAA+TGG | - | chr6_4:61310316-61310335 | Msa0992480:intron | 30.0% | |
| TCAAGATCCTTACACTAATA+AGG | + | chr6_4:61310350-61310369 | None:intergenic | 30.0% | |
| GTGTATAAGTAGAACAAAAG+AGG | - | chr6_4:61310456-61310475 | Msa0992480:intron | 30.0% | |
| ! | AACAAAAGAGGCATGAAATA+AGG | - | chr6_4:61310468-61310487 | Msa0992480:intron | 30.0% |
| GTGTTTGATTATTTGATGAG+TGG | - | chr6_4:61310521-61310540 | Msa0992480:intron | 30.0% | |
| ATTATTTGATGAGTGGTTCT+GGG | - | chr6_4:61310528-61310547 | Msa0992480:intron | 30.0% | |
| ! | TGAACTCTTAATTTAGCCTT+TGG | - | chr6_4:61310677-61310696 | Msa0992480:intron | 30.0% |
| ! | AATTTAGCCTTTGGTTATAG+AGG | - | chr6_4:61310686-61310705 | Msa0992480:intron | 30.0% |
| AATTGATCCTCTATAACCAA+AGG | + | chr6_4:61310696-61310715 | None:intergenic | 30.0% | |
| AATCTAGAAGACAAAGGATA+TGG | - | chr6_4:61311033-61311052 | Msa0992480:intron | 30.0% | |
| ATCTTTAGATCTAAACCTGA+AGG | - | chr6_4:61311056-61311075 | Msa0992480:intron | 30.0% | |
| !!! | CTTTTAAAACAAAAGCCTTC+AGG | + | chr6_4:61311074-61311093 | None:intergenic | 30.0% |
| !!! | GCTTTTGTTTTAAAAGCCAA+AGG | - | chr6_4:61311078-61311097 | Msa0992480:intron | 30.0% |
| TTAGCCTGAAAATCATACTT+GGG | - | chr6_4:61311164-61311183 | Msa0992480:intron | 30.0% | |
| GTGATGCGTCAATAATTAAA+TGG | - | chr6_4:61311417-61311436 | Msa0992480:intron | 30.0% | |
| GTCAATAATTAAATGGCAAC+TGG | - | chr6_4:61311424-61311443 | Msa0992480:intron | 30.0% | |
| AGATGAATGCTTATTGCTTA+TGG | - | chr6_4:61311517-61311536 | Msa0992480:CDS | 30.0% | |
| !! | GGTTAACTATGCTTTTTAAC+TGG | - | chr6_4:61311551-61311570 | Msa0992480:CDS | 30.0% |
| !!! | GAATAGGTTTTGAGTCAACA+CGG | + | chr6_4:61307315-61307334 | None:intergenic | 35.0% |
| CTTTCTCTCTTCACTAGAAT+AGG | + | chr6_4:61307331-61307350 | None:intergenic | 35.0% | |
| GGAATTCAGGTAATTGAGTT+TGG | + | chr6_4:61307458-61307477 | None:intergenic | 35.0% | |
| ! | GATTTAAAGGCATGGTCATT+TGG | + | chr6_4:61307739-61307758 | None:intergenic | 35.0% |
| GCTTACAAGCTCAGATTTAA+AGG | + | chr6_4:61307752-61307771 | None:intergenic | 35.0% | |
| AATCTGAGCTTGTAAGCTAA+AGG | - | chr6_4:61307755-61307774 | Msa0992480:intron | 35.0% | |
| ATCTGAGCTTGTAAGCTAAA+GGG | - | chr6_4:61307756-61307775 | Msa0992480:intron | 35.0% | |
| ! | GCTAAAGGGTTCTTTTCTTT+TGG | - | chr6_4:61307770-61307789 | Msa0992480:intron | 35.0% |
| TTTCTTAGACCCTGTTTGTT+TGG | - | chr6_4:61308098-61308117 | Msa0992480:intron | 35.0% | |
| AATAAGCGGAAACCAAGTTA+TGG | - | chr6_4:61308220-61308239 | Msa0992480:intron | 35.0% | |
| CTTATGACACATCCATAACT+TGG | + | chr6_4:61308235-61308254 | None:intergenic | 35.0% | |
| !!! | TTTTAGAGTCCTACAGATGT+AGG | + | chr6_4:61308529-61308548 | None:intergenic | 35.0% |
| TAGTAAGCTGTGGTAAATAG+TGG | - | chr6_4:61308614-61308633 | Msa0992480:intron | 35.0% | |
| !! | CTATCTGCTATTTCACATAG+CGG | + | chr6_4:61308652-61308671 | None:intergenic | 35.0% |
| ATAAATGGTACACATAGTGC+AGG | - | chr6_4:61308863-61308882 | Msa0992480:intron | 35.0% | |
| CAGTAGCAGGAAAAAAAATC+GGG | + | chr6_4:61308915-61308934 | None:intergenic | 35.0% | |
| GCAGTAGCAGGAAAAAAAAT+CGG | + | chr6_4:61308916-61308935 | None:intergenic | 35.0% | |
| !! | CAGATTTTGAGGGAAAAAAC+TGG | + | chr6_4:61309023-61309042 | None:intergenic | 35.0% |
| ! | GTATAGCATAGCAGATTTTG+AGG | + | chr6_4:61309034-61309053 | None:intergenic | 35.0% |
| CAAATAACAGTGTGCTATAG+CGG | + | chr6_4:61309056-61309075 | None:intergenic | 35.0% | |
| ! | CACACTGTTATTTGACTACA+CGG | - | chr6_4:61309062-61309081 | Msa0992480:intron | 35.0% |
| ! | ACACTGTTATTTGACTACAC+GGG | - | chr6_4:61309063-61309082 | Msa0992480:intron | 35.0% |
| CAAAATGTAAGACACGTATG+GGG | + | chr6_4:61309201-61309220 | None:intergenic | 35.0% | |
| TTTATTCTCACAAAACCCTC+AGG | + | chr6_4:61309673-61309692 | None:intergenic | 35.0% | |
| !! | AGTTTTAGCAAAAGTTCGGA+AGG | - | chr6_4:61309814-61309833 | Msa0992480:intron | 35.0% |
| !! | TTCGGAAGGTATTTACCATA+GGG | - | chr6_4:61309828-61309847 | Msa0992480:intron | 35.0% |
| !! | AGCGAGTTTTGATGTTTATC+GGG | - | chr6_4:61309957-61309976 | Msa0992480:intron | 35.0% |
| ATCAACAGTACACTAACAGA+AGG | + | chr6_4:61310011-61310030 | None:intergenic | 35.0% | |
| AGGTTCACCTTATTAGTGTA+AGG | - | chr6_4:61310340-61310359 | Msa0992480:intron | 35.0% | |
| TGTGCATTCCATAACTACAA+TGG | + | chr6_4:61310380-61310399 | None:intergenic | 35.0% | |
| AATGCACACCTAATGTCTAT+GGG | - | chr6_4:61310392-61310411 | Msa0992480:intron | 35.0% | |
| GATTATTTGATGAGTGGTTC+TGG | - | chr6_4:61310527-61310546 | Msa0992480:intron | 35.0% | |
| GGCAATCGTTACATTCTTAA+CGG | - | chr6_4:61310840-61310859 | Msa0992480:intron | 35.0% | |
| TGTAAATCGTGAAAATGACG+TGG | - | chr6_4:61310918-61310937 | Msa0992480:intron | 35.0% | |
| ! | GAACCATTAGGTCATCTTTT+GGG | + | chr6_4:61310991-61311010 | None:intergenic | 35.0% |
| ! | AGAACCATTAGGTCATCTTT+TGG | + | chr6_4:61310992-61311011 | None:intergenic | 35.0% |
| !! | CAAGTATGATTTTCAGGCTA+AGG | + | chr6_4:61311165-61311184 | None:intergenic | 35.0% |
| CTTAGCCTGAAAATCATACT+TGG | - | chr6_4:61311163-61311182 | Msa0992480:intron | 35.0% | |
| TAGCCTGAAAATCATACTTG+GGG | - | chr6_4:61311165-61311184 | Msa0992480:intron | 35.0% | |
| TGCAGTATATGTGAACTACA+TGG | - | chr6_4:61311334-61311353 | Msa0992480:intron | 35.0% | |
| !! | GTTTTGAGTCAACACGGATT+TGG | + | chr6_4:61307309-61307328 | None:intergenic | 40.0% |
| GTCACGTTCTCTGTTTCATT+TGG | + | chr6_4:61307372-61307391 | None:intergenic | 40.0% | |
| TCTGATAGAGCAAGGAATTC+AGG | + | chr6_4:61307471-61307490 | None:intergenic | 40.0% | |
| AAAAAGGGTAGAGGTGAGTT+TGG | + | chr6_4:61307553-61307572 | None:intergenic | 40.0% | |
| CGAACATTCAAAAAGGGTAG+AGG | + | chr6_4:61307562-61307581 | None:intergenic | 40.0% | |
| ATAGTGAAGTTGAAGTGCAG+AGG | - | chr6_4:61307706-61307725 | Msa0992480:intron | 40.0% | |
| TAGTGAAGTTGAAGTGCAGA+GGG | - | chr6_4:61307707-61307726 | Msa0992480:intron | 40.0% | |
| CAAGCTCAGATTTAAAGGCA+TGG | + | chr6_4:61307747-61307766 | None:intergenic | 40.0% | |
| GTCTGATCGAATGACATGTT+CGG | - | chr6_4:61307826-61307845 | Msa0992480:intron | 40.0% | |
| !! | AGATGTTCTGAAAGCTATCC+TGG | - | chr6_4:61308182-61308201 | Msa0992480:intron | 40.0% |
| GCAGAGCTTATGGAAATAAG+CGG | - | chr6_4:61308206-61308225 | Msa0992480:intron | 40.0% | |
| !! | AAGAGCACGGGTCTATTTTA+TGG | + | chr6_4:61308332-61308351 | None:intergenic | 40.0% |
| AAGTCCTATCCTACATCTGT+AGG | - | chr6_4:61308517-61308536 | Msa0992480:intron | 40.0% | |
| !! | GTTTCTGGTAGAGGATATAG+TGG | + | chr6_4:61308938-61308957 | None:intergenic | 40.0% |
| ! | GGTTATTTCAAGCAGAACAG+TGG | - | chr6_4:61309246-61309265 | Msa0992480:intron | 40.0% |
| !! | GGTGGAGCAAAAGTTTTATG+AGG | - | chr6_4:61309277-61309296 | Msa0992480:intron | 40.0% |
| !! | AAGTTTTATGAGGAGCAGAC+TGG | - | chr6_4:61309287-61309306 | Msa0992480:intron | 40.0% |
| TCGAATTGTTCTTCGGAAGA+TGG | + | chr6_4:61309329-61309348 | None:intergenic | 40.0% | |
| ! | AATTGATTCCAAGGAGTACG+TGG | - | chr6_4:61309352-61309371 | Msa0992480:intron | 40.0% |
| ! | TAGTAGTGGAAGCAGTATCA+AGG | - | chr6_4:61309409-61309428 | Msa0992480:intron | 40.0% |
| ! | TGATGACGATGATGATGATG+AGG | - | chr6_4:61309460-61309479 | Msa0992480:intron | 40.0% |
| !! | GTTCGGAAGGTATTTACCAT+AGG | - | chr6_4:61309827-61309846 | Msa0992480:intron | 40.0% |
| GACTCTTCACATATAACGCA+AGG | + | chr6_4:61309926-61309945 | None:intergenic | 40.0% | |
| CAAAACTCGCTAAAAGAGTG+AGG | + | chr6_4:61309948-61309967 | None:intergenic | 40.0% | |
| CAGTACACTAACAGAAGGTA+GGG | + | chr6_4:61310006-61310025 | None:intergenic | 40.0% | |
| ACAGTACACTAACAGAAGGT+AGG | + | chr6_4:61310007-61310026 | None:intergenic | 40.0% | |
| CCAACAATCATGAAAGAGAC+TGG | + | chr6_4:61310251-61310270 | None:intergenic | 40.0% | |
| CCAGTCTCTTTCATGATTGT+TGG | - | chr6_4:61310248-61310267 | Msa0992480:intron | 40.0% | |
| AGTTAGATTTCCTGAATGGC+AGG | - | chr6_4:61310320-61310339 | Msa0992480:intron | 40.0% | |
| GAATGCACACCTAATGTCTA+TGG | - | chr6_4:61310391-61310410 | Msa0992480:intron | 40.0% | |
| GGCCTTAAGCTTGAATAACT+GGG | - | chr6_4:61310413-61310432 | Msa0992480:intron | 40.0% | |
| CACCCAGTTATTCAAGCTTA+AGG | + | chr6_4:61310418-61310437 | None:intergenic | 40.0% | |
| AGGCATGAAATAAGGCAACA+AGG | - | chr6_4:61310476-61310495 | Msa0992480:intron | 40.0% | |
| AAATAAGGCAACAAGGTCAC+TGG | - | chr6_4:61310483-61310502 | Msa0992480:intron | 40.0% | |
| GCTCATTAGTACAGTGATGA+TGG | + | chr6_4:61310609-61310628 | None:intergenic | 40.0% | |
| ! | TGGACACTTGATGACTGTTT+AGG | - | chr6_4:61310778-61310797 | Msa0992480:intron | 40.0% |
| GATGACTGTTTAGGTCGTAA+AGG | - | chr6_4:61310787-61310806 | Msa0992480:intron | 40.0% | |
| AATGTAACGATTGCCATTGC+GGG | + | chr6_4:61310835-61310854 | None:intergenic | 40.0% | |
| GAATGTAACGATTGCCATTG+CGG | + | chr6_4:61310836-61310855 | None:intergenic | 40.0% | |
| GTTACATTCTTAACGGCCTT+GGG | - | chr6_4:61310847-61310866 | Msa0992480:intron | 40.0% | |
| !! | ATGTGGAATAGAGGTGTTAG+GGG | + | chr6_4:61310886-61310905 | None:intergenic | 40.0% |
| !! | CATGTGGAATAGAGGTGTTA+GGG | + | chr6_4:61310887-61310906 | None:intergenic | 40.0% |
| TCTATTCCACATGCTCTGTA+CGG | - | chr6_4:61310894-61310913 | Msa0992480:intron | 40.0% | |
| GCTGGTTAATCATGAGATGA+AGG | - | chr6_4:61310953-61310972 | Msa0992480:intron | 40.0% | |
| GATCCCAAAAGATGACCTAA+TGG | - | chr6_4:61310985-61311004 | Msa0992480:CDS | 40.0% | |
| TTCTGCAATGCAGAACCATT+AGG | + | chr6_4:61311003-61311022 | None:intergenic | 40.0% | |
| GTTCTGCATTGCAGAAAGAA+GGG | - | chr6_4:61311007-61311026 | Msa0992480:intron | 40.0% | |
| TTCTGCATTGCAGAAAGAAG+GGG | - | chr6_4:61311008-61311027 | Msa0992480:intron | 40.0% | |
| GGGGAAAATCTAGAAGACAA+AGG | - | chr6_4:61311027-61311046 | Msa0992480:intron | 40.0% | |
| CAGGATAGAGATATAATCCC+AGG | + | chr6_4:61311191-61311210 | None:intergenic | 40.0% | |
| CTGGGATTATATCTCTATCC+TGG | - | chr6_4:61311189-61311208 | Msa0992480:intron | 40.0% | |
| ! | TTCTCACCATTTGGGTTCTT+AGG | - | chr6_4:61311721-61311740 | Msa0992480:five_prime_UTR | 40.0% |
| AATGAGCACGTTGAAGGAGT+GGG | + | chr6_4:61307515-61307534 | None:intergenic | 45.0% | |
| AGAGAGAATGAGCACGTTGA+AGG | + | chr6_4:61307521-61307540 | None:intergenic | 45.0% | |
| TGTCATTCGATCAGACGTGT+CGG | + | chr6_4:61307822-61307841 | None:intergenic | 45.0% | |
| ! | TTGTGTTGACGTGTCAGTGT+CGG | - | chr6_4:61307904-61307923 | Msa0992480:intron | 45.0% |
| AAGTGTGTGCCAAAAGAGAC+TGG | - | chr6_4:61308031-61308050 | Msa0992480:intron | 45.0% | |
| ! | GAAGTCGTTCCAGTCTCTTT+TGG | + | chr6_4:61308043-61308062 | None:intergenic | 45.0% |
| CGACTTCCAGATTTGAGTGA+AGG | - | chr6_4:61308056-61308075 | Msa0992480:intron | 45.0% | |
| ATTTCCATAAGCTCTGCACC+AGG | + | chr6_4:61308203-61308222 | None:intergenic | 45.0% | |
| ! | GCACGGGTCTATTTTATGGT+TGG | + | chr6_4:61308328-61308347 | None:intergenic | 45.0% |
| ACATTCCTCGTCTTTACTGC+TGG | - | chr6_4:61308453-61308472 | Msa0992480:intron | 45.0% | |
| CAAAACCAGCAGTAAAGACG+AGG | + | chr6_4:61308461-61308480 | None:intergenic | 45.0% | |
| GAGTCCTACAGATGTAGGAT+AGG | + | chr6_4:61308524-61308543 | None:intergenic | 45.0% | |
| CAAATAGAGCAAGCCGCATA+GGG | - | chr6_4:61308681-61308700 | Msa0992480:intron | 45.0% | |
| AAATAGAGCAAGCCGCATAG+GGG | - | chr6_4:61308682-61308701 | Msa0992480:intron | 45.0% | |
| TAGGGGTTGGAATGAGTCAA+CGG | - | chr6_4:61308699-61308718 | Msa0992480:intron | 45.0% | |
| TCTACCAGAAACTCGAACAG+CGG | - | chr6_4:61308946-61308965 | Msa0992480:intron | 45.0% | |
| GGTTTCAGTTTACATTGCCG+AGG | - | chr6_4:61309084-61309103 | Msa0992480:intron | 45.0% | |
| CAAAACGAAGACAACAGCCT+CGG | + | chr6_4:61309104-61309123 | None:intergenic | 45.0% | |
| AGCAGAACAGTGGCAAGATA+TGG | - | chr6_4:61309256-61309275 | Msa0992480:intron | 45.0% | |
| AGAACAGTGGCAAGATATGG+TGG | - | chr6_4:61309259-61309278 | Msa0992480:intron | 45.0% | |
| CAATTTCTCCACGTACTCCT+TGG | + | chr6_4:61309363-61309382 | None:intergenic | 45.0% | |
| AGTACGTGGAGAAATTGCCA+GGG | - | chr6_4:61309366-61309385 | Msa0992480:intron | 45.0% | |
| !! | GTTGTTGGTGGTAGTAGTAG+TGG | - | chr6_4:61309395-61309414 | Msa0992480:intron | 45.0% |
| ! | AGTTCTGATATGTGAGCCTG+AGG | - | chr6_4:61309654-61309673 | Msa0992480:intron | 45.0% |
| GTTCTGATATGTGAGCCTGA+GGG | - | chr6_4:61309655-61309674 | Msa0992480:intron | 45.0% | |
| ! | CATTCTAGTTGCAAGCCCTA+TGG | + | chr6_4:61309846-61309865 | None:intergenic | 45.0% |
| ATAAGGTGAACCTGCCATTC+AGG | + | chr6_4:61310333-61310352 | None:intergenic | 45.0% | |
| GCTTAAGGCCCATAGACATT+AGG | + | chr6_4:61310403-61310422 | None:intergenic | 45.0% | |
| GGGCCTTAAGCTTGAATAAC+TGG | - | chr6_4:61310412-61310431 | Msa0992480:intron | 45.0% | |
| !! | AACAAGGTCACTGGTTCTAG+TGG | - | chr6_4:61310492-61310511 | Msa0992480:intron | 45.0% |
| !! | ATTTGATGAGTGGTTCTGGG+AGG | - | chr6_4:61310531-61310550 | Msa0992480:intron | 45.0% |
| TTTCAGTTATGGACGGAGAG+TGG | - | chr6_4:61310733-61310752 | Msa0992480:intron | 45.0% | |
| ATGTAACGATTGCCATTGCG+GGG | + | chr6_4:61310834-61310853 | None:intergenic | 45.0% | |
| CGTTACATTCTTAACGGCCT+TGG | - | chr6_4:61310846-61310865 | Msa0992480:intron | 45.0% | |
| !! | GCATGTGGAATAGAGGTGTT+AGG | + | chr6_4:61310888-61310907 | None:intergenic | 45.0% |
| GTACAGAGCATGTGGAATAG+AGG | + | chr6_4:61310895-61310914 | None:intergenic | 45.0% | |
| TTACATCCGTACAGAGCATG+TGG | + | chr6_4:61310903-61310922 | None:intergenic | 45.0% | |
| CTCATGATTAACCAGCGTGT+AGG | + | chr6_4:61310949-61310968 | None:intergenic | 45.0% | |
| GGTTCTGCATTGCAGAAAGA+AGG | - | chr6_4:61311006-61311025 | Msa0992480:intron | 45.0% | |
| ! | AGGCCCCAAGTATGATTTTC+AGG | + | chr6_4:61311171-61311190 | None:intergenic | 45.0% |
| TGAAAATCATACTTGGGGCC+TGG | - | chr6_4:61311170-61311189 | Msa0992480:intron | 45.0% | |
| GAAAATCATACTTGGGGCCT+GGG | - | chr6_4:61311171-61311190 | Msa0992480:intron | 45.0% | |
| GACTACACAAGTTCTGTTCC+AGG | + | chr6_4:61311210-61311229 | None:intergenic | 45.0% | |
| !! | TTCAGCGTCCTTGTTGCTTT+GGG | - | chr6_4:61311376-61311395 | Msa0992480:intron | 45.0% |
| TACAAACAGCAGCTCATAGC+TGG | + | chr6_4:61311495-61311514 | None:intergenic | 45.0% | |
| ! | TATTGCTTATGGCTTGCGAC+TGG | - | chr6_4:61311528-61311547 | Msa0992480:CDS | 45.0% |
| ! | ATTGCTTATGGCTTGCGACT+GGG | - | chr6_4:61311529-61311548 | Msa0992480:CDS | 45.0% |
| CATGAAACTCAAACGCAGAC+AGG | + | chr6_4:61311687-61311706 | None:intergenic | 45.0% | |
| ! | CTGTCTGCGTTTGAGTTTCA+TGG | - | chr6_4:61311685-61311704 | Msa0992480:exon | 45.0% |
| ! | CACCATTTGGGTTCTTAGGT+TGG | - | chr6_4:61311725-61311744 | Msa0992480:five_prime_UTR | 45.0% |
| !!! | TTTTAAAAATTTGTTATAAA+TGG | - | chr6_4:61308848-61308867 | Msa0992480:intron | 5.0% |
| GATCAGGGTCTGATAGAGCA+AGG | + | chr6_4:61307479-61307498 | None:intergenic | 50.0% | |
| !! | GGAGTGTCGCAAGATGATCA+GGG | + | chr6_4:61307494-61307513 | None:intergenic | 50.0% |
| GAATGAGCACGTTGAAGGAG+TGG | + | chr6_4:61307516-61307535 | None:intergenic | 50.0% | |
| !! | ACATGTTCGGTGTCCGACAT+TGG | - | chr6_4:61307839-61307858 | Msa0992480:intron | 50.0% |
| CTATCCTGGTGCAGAGCTTA+TGG | - | chr6_4:61308196-61308215 | Msa0992480:intron | 50.0% | |
| AGCATGGTCGAGAAAGAGCA+CGG | + | chr6_4:61308345-61308364 | None:intergenic | 50.0% | |
| ! | ATGCGGCTTGCTCTATTTGC+AGG | + | chr6_4:61308680-61308699 | None:intergenic | 50.0% |
| GCAAATAGAGCAAGCCGCAT+AGG | - | chr6_4:61308680-61308699 | Msa0992480:intron | 50.0% | |
| GACTCATTCCAACCCCTATG+CGG | + | chr6_4:61308697-61308716 | None:intergenic | 50.0% | |
| GAGGATATAGTGGCAGTAGC+AGG | + | chr6_4:61308928-61308947 | None:intergenic | 50.0% | |
| !! | GCTGTTCGAGTTTCTGGTAG+AGG | + | chr6_4:61308947-61308966 | None:intergenic | 50.0% |
| ! | AGGAGCAGACTGGTCAAAAG+AGG | - | chr6_4:61309297-61309316 | Msa0992480:intron | 50.0% |
| GAGTACGTGGAGAAATTGCC+AGG | - | chr6_4:61309365-61309384 | Msa0992480:intron | 50.0% | |
| GTACGTGGAGAAATTGCCAG+GGG | - | chr6_4:61309367-61309386 | Msa0992480:intron | 50.0% | |
| ! | ACGACCTTTCAGGTCGAAGT+TGG | - | chr6_4:61310758-61310777 | Msa0992480:intron | 50.0% |
| GTGTCCAACTTCGACCTGAA+AGG | + | chr6_4:61310765-61310784 | None:intergenic | 50.0% | |
| GGATAGGAGTTGCAGTAGGT+TGG | + | chr6_4:61310813-61310832 | None:intergenic | 50.0% | |
| ! | GTTCAGCGTCCTTGTTGCTT+TGG | - | chr6_4:61311375-61311394 | Msa0992480:intron | 50.0% |
| !! | TCAGCGTCCTTGTTGCTTTG+GGG | - | chr6_4:61311377-61311396 | Msa0992480:intron | 50.0% |
| ! | TTGCTTATGGCTTGCGACTG+GGG | - | chr6_4:61311530-61311549 | Msa0992480:CDS | 50.0% |
| !! | GGGAGTGTCGCAAGATGATC+AGG | + | chr6_4:61307495-61307514 | None:intergenic | 55.0% |
| GGTAGAGGTGAGTTTGGCGA+GGG | + | chr6_4:61307547-61307566 | None:intergenic | 55.0% | |
| !! | GTACGGTGTCGTGCCAATGT+CGG | + | chr6_4:61307855-61307874 | None:intergenic | 55.0% |
| ! | GCATGGTCGAGAAAGAGCAC+GGG | + | chr6_4:61308344-61308363 | None:intergenic | 55.0% |
| TTGCCAGGGGAGGATGTTGT+TGG | - | chr6_4:61309380-61309399 | Msa0992480:intron | 55.0% | |
| GAGAGTGGAGACGACCTTTC+AGG | - | chr6_4:61310748-61310767 | Msa0992480:intron | 55.0% | |
| TGCAACTCCTATCCCCGCAA+TGG | - | chr6_4:61310819-61310838 | Msa0992480:intron | 55.0% | |
| ACGATTGCCATTGCGGGGAT+AGG | + | chr6_4:61310829-61310848 | None:intergenic | 55.0% | |
| ! | GAGGTGTTAGGGGCCACATA+AGG | + | chr6_4:61310876-61310895 | None:intergenic | 55.0% |
| ACGTGGCTTATCCTACACGC+TGG | - | chr6_4:61310935-61310954 | Msa0992480:intron | 55.0% | |
| ACACGAGACGCGTTCTCCTT+TGG | + | chr6_4:61311097-61311116 | None:intergenic | 55.0% | |
| TGAGTCGCCCCAAAGCAACA+AGG | + | chr6_4:61311387-61311406 | None:intergenic | 55.0% | |
| TGGGGCGACTCATCAAAGCT+TGG | - | chr6_4:61311395-61311414 | Msa0992480:intron | 55.0% | |
| GGGTAGAGGTGAGTTTGGCG+AGG | + | chr6_4:61307548-61307567 | None:intergenic | 60.0% | |
| AGAGCAAGCCGCATAGGGGT+TGG | - | chr6_4:61308686-61308705 | Msa0992480:intron | 60.0% | |
| CGTGGAGAAATTGCCAGGGG+AGG | - | chr6_4:61309370-61309389 | Msa0992480:intron | 60.0% | |
| CCACCAACAACATCCTCCCC+TGG | + | chr6_4:61309386-61309405 | None:intergenic | 60.0% | |
| CCAGGGGAGGATGTTGTTGG+TGG | - | chr6_4:61309383-61309402 | Msa0992480:intron | 60.0% | |
| GCGGGGATAGGAGTTGCAGT+AGG | + | chr6_4:61310817-61310836 | None:intergenic | 60.0% | |
| CGGCCTTGGGACTCCTTATG+TGG | - | chr6_4:61310860-61310879 | Msa0992480:intron | 60.0% | |
| GGGCCACATAAGGAGTCCCA+AGG | + | chr6_4:61310866-61310885 | None:intergenic | 60.0% | |
| ! | GCGGCCGCTGTTCGAGTTTC+TGG | + | chr6_4:61308953-61308972 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 61307299 | 61311748 | 61307299 | ID=Msa0992480;Name=Msa0992480 |
| chr6_4 | mRNA | 61307299 | 61311748 | 61307299 | ID=Msa0992480-mRNA-1;Parent=Msa0992480;Name=Msa0992480-mRNA-1;_AED=0.12;_eAED=0.12;_QI=61|0.5|0.4|1|0.75|0.6|5|328|154 |
| chr6_4 | exon | 61307299 | 61307708 | 61307299 | ID=Msa0992480-mRNA-1:exon:11873;Parent=Msa0992480-mRNA-1 |
| chr6_4 | exon | 61309681 | 61309786 | 61309681 | ID=Msa0992480-mRNA-1:exon:11872;Parent=Msa0992480-mRNA-1 |
| chr6_4 | exon | 61310970 | 61311019 | 61310970 | ID=Msa0992480-mRNA-1:exon:11871;Parent=Msa0992480-mRNA-1 |
| chr6_4 | exon | 61311328 | 61311337 | 61311328 | ID=Msa0992480-mRNA-1:exon:11870;Parent=Msa0992480-mRNA-1 |
| chr6_4 | exon | 61311471 | 61311748 | 61311471 | ID=Msa0992480-mRNA-1:exon:11869;Parent=Msa0992480-mRNA-1 |
| chr6_4 | five_prime_UTR | 61311688 | 61311748 | 61311688 | ID=Msa0992480-mRNA-1:five_prime_utr;Parent=Msa0992480-mRNA-1 |
| chr6_4 | CDS | 61311471 | 61311687 | 61311471 | ID=Msa0992480-mRNA-1:cds;Parent=Msa0992480-mRNA-1 |
| chr6_4 | CDS | 61311328 | 61311337 | 61311328 | ID=Msa0992480-mRNA-1:cds;Parent=Msa0992480-mRNA-1 |
| chr6_4 | CDS | 61310970 | 61311019 | 61310970 | ID=Msa0992480-mRNA-1:cds;Parent=Msa0992480-mRNA-1 |
| chr6_4 | CDS | 61309681 | 61309786 | 61309681 | ID=Msa0992480-mRNA-1:cds;Parent=Msa0992480-mRNA-1 |
| chr6_4 | CDS | 61307627 | 61307708 | 61307627 | ID=Msa0992480-mRNA-1:cds;Parent=Msa0992480-mRNA-1 |
| chr6_4 | three_prime_UTR | 61307299 | 61307626 | 61307299 | ID=Msa0992480-mRNA-1:three_prime_utr;Parent=Msa0992480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
