Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993690 | XP_003626737.1 | 93.617 | 141 | 9 | 0 | 1 | 141 | 144 | 284 | 2.28e-90 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993690 | sp|D7SSD8|MJE1_VITVI | 45.390 | 141 | 73 | 3 | 1 | 141 | 124 | 260 | 4.14e-32 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993690 | G7LBP1 | 93.617 | 141 | 9 | 0 | 1 | 141 | 144 | 284 | 1.09e-90 | 274 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0993690 | Msa1309400 | 0.893663 | 5.094658e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993690 | MtrunA17_Chr8g0336401 | 93.617 | 141 | 9 | 0 | 1 | 141 | 144 | 284 | 2.09e-94 | 274 |
| Msa0993690 | MtrunA17_Chr8g0336411 | 86.525 | 141 | 16 | 1 | 1 | 141 | 144 | 281 | 4.19e-85 | 250 |
| Msa0993690 | MtrunA17_Chr8g0336441 | 73.529 | 136 | 36 | 0 | 6 | 141 | 143 | 278 | 4.49e-68 | 207 |
| Msa0993690 | MtrunA17_Chr3g0104871 | 74.074 | 135 | 35 | 0 | 7 | 141 | 136 | 270 | 8.08e-68 | 206 |
| Msa0993690 | MtrunA17_Chr8g0336391 | 61.151 | 139 | 52 | 1 | 3 | 141 | 145 | 281 | 3.94e-54 | 171 |
| Msa0993690 | MtrunA17_Chr8g0336381 | 51.938 | 129 | 61 | 1 | 14 | 141 | 134 | 262 | 7.63e-39 | 132 |
| Msa0993690 | MtrunA17_Chr5g0402871 | 46.099 | 141 | 72 | 3 | 2 | 141 | 122 | 259 | 4.20e-33 | 117 |
| Msa0993690 | MtrunA17_Chr5g0402851 | 45.070 | 142 | 74 | 3 | 1 | 141 | 124 | 262 | 1.66e-32 | 115 |
| Msa0993690 | MtrunA17_Chr5g0402841 | 46.923 | 130 | 66 | 3 | 13 | 141 | 134 | 261 | 1.16e-31 | 113 |
| Msa0993690 | MtrunA17_Chr8g0374141 | 37.069 | 116 | 70 | 2 | 26 | 141 | 190 | 302 | 6.22e-18 | 77.8 |
| Msa0993690 | MtrunA17_Chr5g0402901 | 38.261 | 115 | 66 | 3 | 28 | 141 | 151 | 261 | 8.55e-16 | 71.6 |
| Msa0993690 | MtrunA17_Chr5g0402881 | 35.897 | 117 | 70 | 3 | 26 | 141 | 166 | 278 | 3.72e-14 | 67.4 |
| Msa0993690 | MtrunA17_Chr5g0428471 | 33.333 | 132 | 81 | 3 | 11 | 141 | 155 | 280 | 9.49e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0993690 | AT2G23570.1 | 44.262 | 122 | 63 | 3 | 21 | 141 | 61 | 178 | 3.89e-24 | 92.0 |
| Msa0993690 | AT2G23580.1 | 41.667 | 120 | 65 | 3 | 23 | 141 | 147 | 262 | 1.24e-21 | 87.4 |
| Msa0993690 | AT2G23610.1 | 36.691 | 139 | 85 | 2 | 3 | 141 | 127 | 262 | 3.43e-21 | 86.3 |
| Msa0993690 | AT3G50440.1 | 35.200 | 125 | 78 | 2 | 17 | 141 | 153 | 274 | 3.62e-20 | 84.0 |
| Msa0993690 | AT2G23620.1 | 37.705 | 122 | 73 | 2 | 20 | 141 | 144 | 262 | 5.87e-19 | 80.5 |
| Msa0993690 | AT2G23550.2 | 36.066 | 122 | 73 | 3 | 21 | 141 | 116 | 233 | 2.09e-17 | 75.9 |
| Msa0993690 | AT2G23550.1 | 36.066 | 122 | 73 | 3 | 21 | 141 | 145 | 262 | 3.24e-17 | 75.9 |
| Msa0993690 | AT2G23550.4 | 36.066 | 122 | 73 | 3 | 21 | 141 | 152 | 269 | 3.39e-17 | 75.9 |
| Msa0993690 | AT4G37150.1 | 43.269 | 104 | 56 | 2 | 38 | 141 | 155 | 255 | 4.68e-17 | 75.5 |
| Msa0993690 | AT2G23600.1 | 35.246 | 122 | 76 | 2 | 20 | 141 | 144 | 262 | 5.93e-17 | 75.1 |
| Msa0993690 | AT2G23600.2 | 35.246 | 122 | 76 | 2 | 20 | 141 | 159 | 277 | 7.69e-17 | 75.1 |
| Msa0993690 | AT2G23560.1 | 35.537 | 121 | 75 | 2 | 21 | 141 | 142 | 259 | 8.87e-16 | 72.0 |
| Msa0993690 | AT2G23590.1 | 31.579 | 114 | 75 | 2 | 28 | 141 | 161 | 271 | 3.61e-12 | 62.4 |
| Msa0993690 | AT2G23610.2 | 37.755 | 98 | 56 | 3 | 45 | 141 | 124 | 217 | 1.22e-11 | 60.1 |
| Msa0993690 | AT4G16690.1 | 31.159 | 138 | 81 | 6 | 5 | 137 | 128 | 256 | 5.30e-11 | 58.9 |
Find 34 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCAACTGCCTTGTTGTT+TGG | 0.223716 | 6_4:+66720931 | Msa0993690:CDS |
| TTAGAGAGGATCTGCAATTA+TGG | 0.262915 | 6_4:+66721616 | Msa0993690:CDS |
| CCACAGTTATTCTTCATTGA+TGG | 0.283394 | 6_4:+66720898 | Msa0993690:CDS |
| ATCACTTTCACTTCAACATA+TGG | 0.320896 | 6_4:-66721657 | None:intergenic |
| TTGGAAATAATGAAGACTTT+TGG | 0.329148 | 6_4:-66721579 | None:intergenic |
| TCTAATGAAAATGTCTCCTT+TGG | 0.376102 | 6_4:-66721598 | None:intergenic |
| TACCCTTCCATTCCTCTGCT+TGG | 0.389684 | 6_4:-66721556 | None:intergenic |
| AAGGCAGTTGGAGGACTGTT+TGG | 0.392141 | 6_4:-66720922 | None:intergenic |
| TGTTGAAGTGAAAGTGATAA+AGG | 0.400092 | 6_4:+66721662 | Msa0993690:CDS |
| AAGATTAAATTCCAGTCAAC+AGG | 0.402609 | 6_4:+66720870 | Msa0993690:CDS |
| TTTGACACTTGGGTCATCAT+TGG | 0.414427 | 6_4:+66721476 | Msa0993690:CDS |
| GTTGTTTGGATCTAAACTCT+TGG | 0.419417 | 6_4:+66720945 | Msa0993690:CDS |
| CATGCGCAGGATTTGACACT+TGG | 0.438141 | 6_4:+66721465 | Msa0993690:intron |
| AGCAGTCTTTAGAATGTAAG+AGG | 0.485742 | 6_4:-66721727 | None:intergenic |
| GTATCAATTATCGCCTAATG+AGG | 0.511231 | 6_4:+66720978 | Msa0993690:CDS |
| AATTGGTGTTGAAAGAAGCA+AGG | 0.519211 | 6_4:+66721529 | Msa0993690:CDS |
| AAAGTCTTCATTATTTCCAA+AGG | 0.521901 | 6_4:+66721582 | Msa0993690:CDS |
| TCGTCATTAAAGATAGGATG+TGG | 0.526108 | 6_4:-66721504 | None:intergenic |
| TTATGGATAATTGAGAGAAC+GGG | 0.528041 | 6_4:+66721633 | Msa0993690:CDS |
| AGGGTTACCAAGCAGAGGAA+TGG | 0.528556 | 6_4:+66721549 | Msa0993690:CDS |
| GATCCAAACAACAAGGCAGT+TGG | 0.532373 | 6_4:-66720934 | None:intergenic |
| ATTATGGATAATTGAGAGAA+CGG | 0.544632 | 6_4:+66721632 | Msa0993690:CDS |
| CTGTGGTGGATCCTGTTGAC+TGG | 0.559384 | 6_4:-66720881 | None:intergenic |
| ATTGGTGTTGAAAGAAGCAA+GGG | 0.568194 | 6_4:+66721530 | Msa0993690:CDS |
| CCAAACAACAAGGCAGTTGG+AGG | 0.578597 | 6_4:-66720931 | None:intergenic |
| TTACCAAGCAGAGGAATGGA+AGG | 0.593361 | 6_4:+66721553 | Msa0993690:CDS |
| CACTTGGGTCATCATTGGTG+AGG | 0.603881 | 6_4:+66721481 | Msa0993690:CDS |
| AAGCAAGGGTTACCAAGCAG+AGG | 0.608021 | 6_4:+66721544 | Msa0993690:CDS |
| TCAATGAAGAATAACTGTGG+TGG | 0.619467 | 6_4:-66720895 | None:intergenic |
| ATGCGCAGGATTTGACACTT+GGG | 0.634134 | 6_4:+66721466 | Msa0993690:intron |
| GATAAAGGATTCAGATCACA+TGG | 0.658047 | 6_4:+66721677 | Msa0993690:CDS |
| TACCAAGCAGAGGAATGGAA+GGG | 0.694878 | 6_4:+66721554 | Msa0993690:CDS |
| GAGTTTAGATCCAAACAACA+AGG | 0.704963 | 6_4:-66720941 | None:intergenic |
| CCATCAATGAAGAATAACTG+TGG | 0.765316 | 6_4:-66720898 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTGAAAATTTGAAATAA+AGG | + | chr6_4:66721016-66721035 | Msa0993690:intron | 10.0% |
| !!! | TAATTGAAAATTTGAAATAA+AGG | + | chr6_4:66721016-66721035 | Msa0993690:intron | 10.0% |
| !! | CTGTTAAAAATAATTTATCT+AGG | + | chr6_4:66721215-66721234 | Msa0993690:intron | 15.0% |
| !! | TAATATAATATGGTATGTTA+AGG | - | chr6_4:66721396-66721415 | None:intergenic | 15.0% |
| !! | CTGTTAAAAATAATTTATCT+AGG | + | chr6_4:66721215-66721234 | Msa0993690:intron | 15.0% |
| !! | TAATATAATATGGTATGTTA+AGG | - | chr6_4:66721396-66721415 | None:intergenic | 15.0% |
| !! | AACAAAAAAATTACCTCATT+AGG | - | chr6_4:66720994-66721013 | None:intergenic | 20.0% |
| !!! | AATTTTTCGTCATTAAAGAT+AGG | - | chr6_4:66721513-66721532 | None:intergenic | 20.0% |
| !! | TATCTTTAATGACGAAAAAT+TGG | + | chr6_4:66721512-66721531 | Msa0993690:CDS | 20.0% |
| !! | AACAAAAAAATTACCTCATT+AGG | - | chr6_4:66720994-66721013 | None:intergenic | 20.0% |
| !!! | AATTTTTCGTCATTAAAGAT+AGG | - | chr6_4:66721513-66721532 | None:intergenic | 20.0% |
| !! | TATCTTTAATGACGAAAAAT+TGG | + | chr6_4:66721512-66721531 | Msa0993690:CDS | 20.0% |
| ! | CGATTAAACTTCAAATCATT+AGG | + | chr6_4:66721296-66721315 | Msa0993690:intron | 25.0% |
| ! | TTAAACTTCAAATCATTAGG+AGG | + | chr6_4:66721299-66721318 | Msa0993690:intron | 25.0% |
| !! | TTGGAAATAATGAAGACTTT+TGG | - | chr6_4:66721582-66721601 | None:intergenic | 25.0% |
| ! | AAAGTCTTCATTATTTCCAA+AGG | + | chr6_4:66721582-66721601 | Msa0993690:CDS | 25.0% |
| ! | ATTATGGATAATTGAGAGAA+CGG | + | chr6_4:66721632-66721651 | Msa0993690:CDS | 25.0% |
| ! | CGATTAAACTTCAAATCATT+AGG | + | chr6_4:66721296-66721315 | Msa0993690:intron | 25.0% |
| ! | TTAAACTTCAAATCATTAGG+AGG | + | chr6_4:66721299-66721318 | Msa0993690:intron | 25.0% |
| !! | TTGGAAATAATGAAGACTTT+TGG | - | chr6_4:66721582-66721601 | None:intergenic | 25.0% |
| ! | AAAGTCTTCATTATTTCCAA+AGG | + | chr6_4:66721582-66721601 | Msa0993690:CDS | 25.0% |
| ! | ATTATGGATAATTGAGAGAA+CGG | + | chr6_4:66721632-66721651 | Msa0993690:CDS | 25.0% |
| AAGATTAAATTCCAGTCAAC+AGG | + | chr6_4:66720870-66720889 | Msa0993690:CDS | 30.0% | |
| TCTAATGAAAATGTCTCCTT+TGG | - | chr6_4:66721601-66721620 | None:intergenic | 30.0% | |
| TTATGGATAATTGAGAGAAC+GGG | + | chr6_4:66721633-66721652 | Msa0993690:CDS | 30.0% | |
| ATCACTTTCACTTCAACATA+TGG | - | chr6_4:66721660-66721679 | None:intergenic | 30.0% | |
| TGTTGAAGTGAAAGTGATAA+AGG | + | chr6_4:66721662-66721681 | Msa0993690:CDS | 30.0% | |
| ! | ATGTAAGAGGTAAGCTTTTT+AGG | - | chr6_4:66721717-66721736 | None:intergenic | 30.0% |
| AAGATTAAATTCCAGTCAAC+AGG | + | chr6_4:66720870-66720889 | Msa0993690:CDS | 30.0% | |
| TCTAATGAAAATGTCTCCTT+TGG | - | chr6_4:66721601-66721620 | None:intergenic | 30.0% | |
| TTATGGATAATTGAGAGAAC+GGG | + | chr6_4:66721633-66721652 | Msa0993690:CDS | 30.0% | |
| ATCACTTTCACTTCAACATA+TGG | - | chr6_4:66721660-66721679 | None:intergenic | 30.0% | |
| TGTTGAAGTGAAAGTGATAA+AGG | + | chr6_4:66721662-66721681 | Msa0993690:CDS | 30.0% | |
| ! | ATGTAAGAGGTAAGCTTTTT+AGG | - | chr6_4:66721717-66721736 | None:intergenic | 30.0% |
| TCAATGAAGAATAACTGTGG+TGG | - | chr6_4:66720898-66720917 | None:intergenic | 35.0% | |
| CCATCAATGAAGAATAACTG+TGG | - | chr6_4:66720901-66720920 | None:intergenic | 35.0% | |
| CCACAGTTATTCTTCATTGA+TGG | + | chr6_4:66720898-66720917 | Msa0993690:CDS | 35.0% | |
| GAGTTTAGATCCAAACAACA+AGG | - | chr6_4:66720944-66720963 | None:intergenic | 35.0% | |
| GTTGTTTGGATCTAAACTCT+TGG | + | chr6_4:66720945-66720964 | Msa0993690:CDS | 35.0% | |
| GTATCAATTATCGCCTAATG+AGG | + | chr6_4:66720978-66720997 | Msa0993690:CDS | 35.0% | |
| ACATTGAAGCCAATCATTGA+TGG | + | chr6_4:66721439-66721458 | Msa0993690:intron | 35.0% | |
| TCGTCATTAAAGATAGGATG+TGG | - | chr6_4:66721507-66721526 | None:intergenic | 35.0% | |
| !! | AATTGGTGTTGAAAGAAGCA+AGG | + | chr6_4:66721529-66721548 | Msa0993690:CDS | 35.0% |
| !! | ATTGGTGTTGAAAGAAGCAA+GGG | + | chr6_4:66721530-66721549 | Msa0993690:CDS | 35.0% |
| ! | AGGAGACATTTTCATTAGAG+AGG | + | chr6_4:66721602-66721621 | Msa0993690:CDS | 35.0% |
| TTAGAGAGGATCTGCAATTA+TGG | + | chr6_4:66721616-66721635 | Msa0993690:CDS | 35.0% | |
| GATAAAGGATTCAGATCACA+TGG | + | chr6_4:66721677-66721696 | Msa0993690:CDS | 35.0% | |
| !!! | AGAGGTAAGCTTTTTAGGTT+TGG | - | chr6_4:66721712-66721731 | None:intergenic | 35.0% |
| !! | AGCAGTCTTTAGAATGTAAG+AGG | - | chr6_4:66721730-66721749 | None:intergenic | 35.0% |
| TCAATGAAGAATAACTGTGG+TGG | - | chr6_4:66720898-66720917 | None:intergenic | 35.0% | |
| CCATCAATGAAGAATAACTG+TGG | - | chr6_4:66720901-66720920 | None:intergenic | 35.0% | |
| CCACAGTTATTCTTCATTGA+TGG | + | chr6_4:66720898-66720917 | Msa0993690:CDS | 35.0% | |
| GAGTTTAGATCCAAACAACA+AGG | - | chr6_4:66720944-66720963 | None:intergenic | 35.0% | |
| GTTGTTTGGATCTAAACTCT+TGG | + | chr6_4:66720945-66720964 | Msa0993690:CDS | 35.0% | |
| GTATCAATTATCGCCTAATG+AGG | + | chr6_4:66720978-66720997 | Msa0993690:CDS | 35.0% | |
| ACATTGAAGCCAATCATTGA+TGG | + | chr6_4:66721439-66721458 | Msa0993690:intron | 35.0% | |
| TCGTCATTAAAGATAGGATG+TGG | - | chr6_4:66721507-66721526 | None:intergenic | 35.0% | |
| !! | AATTGGTGTTGAAAGAAGCA+AGG | + | chr6_4:66721529-66721548 | Msa0993690:CDS | 35.0% |
| !! | ATTGGTGTTGAAAGAAGCAA+GGG | + | chr6_4:66721530-66721549 | Msa0993690:CDS | 35.0% |
| ! | AGGAGACATTTTCATTAGAG+AGG | + | chr6_4:66721602-66721621 | Msa0993690:CDS | 35.0% |
| TTAGAGAGGATCTGCAATTA+TGG | + | chr6_4:66721616-66721635 | Msa0993690:CDS | 35.0% | |
| GATAAAGGATTCAGATCACA+TGG | + | chr6_4:66721677-66721696 | Msa0993690:CDS | 35.0% | |
| !!! | AGAGGTAAGCTTTTTAGGTT+TGG | - | chr6_4:66721712-66721731 | None:intergenic | 35.0% |
| !! | AGCAGTCTTTAGAATGTAAG+AGG | - | chr6_4:66721730-66721749 | None:intergenic | 35.0% |
| CGCATGTAACCATCAATGAT+TGG | - | chr6_4:66721451-66721470 | None:intergenic | 40.0% | |
| TTTGACACTTGGGTCATCAT+TGG | + | chr6_4:66721476-66721495 | Msa0993690:CDS | 40.0% | |
| CGCATGTAACCATCAATGAT+TGG | - | chr6_4:66721451-66721470 | None:intergenic | 40.0% | |
| TTTGACACTTGGGTCATCAT+TGG | + | chr6_4:66721476-66721495 | Msa0993690:CDS | 40.0% | |
| GATCCAAACAACAAGGCAGT+TGG | - | chr6_4:66720937-66720956 | None:intergenic | 45.0% | |
| ! | TCATTGATGGTTACATGCGC+AGG | + | chr6_4:66721452-66721471 | Msa0993690:intron | 45.0% |
| ATGCGCAGGATTTGACACTT+GGG | + | chr6_4:66721466-66721485 | Msa0993690:intron | 45.0% | |
| TTACCAAGCAGAGGAATGGA+AGG | + | chr6_4:66721553-66721572 | Msa0993690:CDS | 45.0% | |
| TACCAAGCAGAGGAATGGAA+GGG | + | chr6_4:66721554-66721573 | Msa0993690:CDS | 45.0% | |
| GATCCAAACAACAAGGCAGT+TGG | - | chr6_4:66720937-66720956 | None:intergenic | 45.0% | |
| ! | TCATTGATGGTTACATGCGC+AGG | + | chr6_4:66721452-66721471 | Msa0993690:intron | 45.0% |
| ATGCGCAGGATTTGACACTT+GGG | + | chr6_4:66721466-66721485 | Msa0993690:intron | 45.0% | |
| TTACCAAGCAGAGGAATGGA+AGG | + | chr6_4:66721553-66721572 | Msa0993690:CDS | 45.0% | |
| TACCAAGCAGAGGAATGGAA+GGG | + | chr6_4:66721554-66721573 | Msa0993690:CDS | 45.0% | |
| !! | ATGTATAATATAATATAATA+TGG | - | chr6_4:66721406-66721425 | None:intergenic | 5.0% |
| !! | ATGTATAATATAATATAATA+TGG | - | chr6_4:66721406-66721425 | None:intergenic | 5.0% |
| AAGGCAGTTGGAGGACTGTT+TGG | - | chr6_4:66720925-66720944 | None:intergenic | 50.0% | |
| CCAAACAACAAGGCAGTTGG+AGG | - | chr6_4:66720934-66720953 | None:intergenic | 50.0% | |
| !! | CCTCCAACTGCCTTGTTGTT+TGG | + | chr6_4:66720931-66720950 | Msa0993690:CDS | 50.0% |
| CATGCGCAGGATTTGACACT+TGG | + | chr6_4:66721465-66721484 | Msa0993690:intron | 50.0% | |
| CACTTGGGTCATCATTGGTG+AGG | + | chr6_4:66721481-66721500 | Msa0993690:CDS | 50.0% | |
| AAGCAAGGGTTACCAAGCAG+AGG | + | chr6_4:66721544-66721563 | Msa0993690:CDS | 50.0% | |
| AGGGTTACCAAGCAGAGGAA+TGG | + | chr6_4:66721549-66721568 | Msa0993690:CDS | 50.0% | |
| TACCCTTCCATTCCTCTGCT+TGG | - | chr6_4:66721559-66721578 | None:intergenic | 50.0% | |
| AAGGCAGTTGGAGGACTGTT+TGG | - | chr6_4:66720925-66720944 | None:intergenic | 50.0% | |
| CCAAACAACAAGGCAGTTGG+AGG | - | chr6_4:66720934-66720953 | None:intergenic | 50.0% | |
| !! | CCTCCAACTGCCTTGTTGTT+TGG | + | chr6_4:66720931-66720950 | Msa0993690:CDS | 50.0% |
| CATGCGCAGGATTTGACACT+TGG | + | chr6_4:66721465-66721484 | Msa0993690:intron | 50.0% | |
| CACTTGGGTCATCATTGGTG+AGG | + | chr6_4:66721481-66721500 | Msa0993690:CDS | 50.0% | |
| AAGCAAGGGTTACCAAGCAG+AGG | + | chr6_4:66721544-66721563 | Msa0993690:CDS | 50.0% | |
| AGGGTTACCAAGCAGAGGAA+TGG | + | chr6_4:66721549-66721568 | Msa0993690:CDS | 50.0% | |
| TACCCTTCCATTCCTCTGCT+TGG | - | chr6_4:66721559-66721578 | None:intergenic | 50.0% | |
| !! | CTGTGGTGGATCCTGTTGAC+TGG | - | chr6_4:66720884-66720903 | None:intergenic | 55.0% |
| !! | CTGTGGTGGATCCTGTTGAC+TGG | - | chr6_4:66720884-66720903 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 66720862 | 66721761 | 66720862 | ID=Msa0993690;Name=Msa0993690 |
| chr6_4 | mRNA | 66720862 | 66721761 | 66720862 | ID=Msa0993690-mRNA-1;Parent=Msa0993690;Name=Msa0993690-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|2|0|141 |
| chr6_4 | exon | 66720862 | 66720999 | 66720862 | ID=Msa0993690-mRNA-1:exon:12448;Parent=Msa0993690-mRNA-1 |
| chr6_4 | exon | 66721474 | 66721761 | 66721474 | ID=Msa0993690-mRNA-1:exon:12449;Parent=Msa0993690-mRNA-1 |
| chr6_4 | CDS | 66720862 | 66720999 | 66720862 | ID=Msa0993690-mRNA-1:cds;Parent=Msa0993690-mRNA-1 |
| chr6_4 | CDS | 66721474 | 66721761 | 66721474 | ID=Msa0993690-mRNA-1:cds;Parent=Msa0993690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
