AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0996060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996060 MtrunA17_Chr6g0480581 98.755 241 2 1 1 240 1 241 0.0 495
Msa0996060 MtrunA17_Chr3g0125801 60.112 178 64 5 2 177 14 186 1.16e-61 195
Msa0996060 MtrunA17_Chr5g0417621 66.917 133 43 1 2 134 132 263 3.83e-59 192
Msa0996060 MtrunA17_Chr4g0042501 52.874 174 74 2 1 167 102 274 4.03e-59 192
Msa0996060 MtrunA17_Chr7g0254261 73.214 112 30 0 1 112 86 197 1.50e-56 184
Msa0996060 MtrunA17_Chr6g0460671 70.192 104 31 0 4 107 99 202 1.12e-50 168
Msa0996060 MtrunA17_Chr6g0460661 57.143 112 48 0 3 114 15 126 1.40e-44 147
Msa0996060 MtrunA17_Chr4g0008551 57.000 100 43 0 4 103 38 137 9.73e-39 137
Msa0996060 MtrunA17_Chr6g0454921 54.082 98 45 0 4 101 15 112 1.28e-35 125
Msa0996060 MtrunA17_Chr5g0401731 54.000 100 46 0 4 103 15 114 3.86e-35 127
Msa0996060 MtrunA17_Chr3g0133601 54.000 100 46 0 4 103 37 136 8.48e-34 121
Msa0996060 MtrunA17_Chr4g0053431 53.000 100 47 0 4 103 5 104 9.31e-34 122
Msa0996060 MtrunA17_Chr5g0437321 52.041 98 47 0 4 101 19 116 3.01e-33 121
Msa0996060 MtrunA17_Chr7g0238631 53.000 100 47 0 4 103 113 212 7.55e-32 122
Msa0996060 MtrunA17_Chr3g0139671 47.368 114 57 1 4 117 85 195 4.40e-31 120
Msa0996060 MtrunA17_Chr1g0157731 46.491 114 58 1 4 117 91 201 2.10e-30 119
Msa0996060 MtrunA17_Chr5g0429661 49.515 103 52 0 1 103 119 221 5.46e-29 112
Msa0996060 MtrunA17_Chr2g0309911 46.667 120 54 4 4 121 13 124 1.79e-27 107
Msa0996060 MtrunA17_Chr4g0022901 50.495 101 49 1 4 103 15 115 3.84e-27 105
Msa0996060 MtrunA17_Chr5g0435101 38.037 163 81 6 3 161 12 158 4.96e-27 103
Msa0996060 MtrunA17_Chr3g0117511 44.800 125 67 1 4 126 183 307 6.93e-27 107
Msa0996060 MtrunA17_Chr4g0058991 42.748 131 73 1 1 129 206 336 1.18e-26 107
Msa0996060 MtrunA17_Chr7g0228891 44.628 121 60 3 4 122 14 129 1.25e-26 103
Msa0996060 MtrunA17_Chr1g0203441 46.078 102 52 2 4 103 15 115 1.75e-26 103
Msa0996060 MtrunA17_Chr4g0022931 49.505 101 50 1 4 103 15 115 1.88e-26 103
Msa0996060 MtrunA17_Chr2g0323351 48.039 102 50 2 4 103 14 114 1.97e-26 102
Msa0996060 MtrunA17_Chr8g0342521 44.094 127 61 4 4 128 14 132 2.11e-26 104
Msa0996060 MtrunA17_Chr4g0055981 44.554 101 55 1 4 103 57 157 2.39e-26 102
Msa0996060 MtrunA17_Chr1g0187761 50.000 102 48 2 4 103 14 114 2.75e-26 102
Msa0996060 MtrunA17_Chr5g0397841 52.174 92 44 0 7 98 113 204 2.80e-26 105
Msa0996060 MtrunA17_Chr2g0311221 50.515 97 47 1 4 99 16 112 3.14e-26 103
Msa0996060 MtrunA17_Chr5g0397231 52.632 95 44 1 4 97 14 108 3.62e-26 103
Msa0996060 MtrunA17_Chr3g0115821 41.429 140 63 5 4 141 14 136 4.30e-26 103
Msa0996060 MtrunA17_Chr8g0342541 48.039 102 50 2 4 103 14 114 5.37e-26 103
Msa0996060 MtrunA17_Chr2g0330041 52.083 96 43 2 4 97 14 108 8.38e-26 103
Msa0996060 MtrunA17_Chr1g0203411 46.667 105 54 2 4 106 14 118 9.41e-26 102
Msa0996060 MtrunA17_Chr4g0022911 48.515 101 51 1 4 103 15 115 9.53e-26 102
Msa0996060 MtrunA17_Chr3g0103281 45.545 101 54 1 4 103 14 114 1.01e-25 102
Msa0996060 MtrunA17_Chr7g0274581 31.414 191 114 4 4 185 14 196 1.06e-25 99.8
Msa0996060 MtrunA17_Chr8g0360111 46.154 104 47 2 4 102 27 126 1.09e-25 101
Msa0996060 MtrunA17_Chr8g0387421 46.667 105 55 1 4 107 14 118 1.16e-25 102
Msa0996060 MtrunA17_Chr7g0228531 44.167 120 63 2 4 123 220 335 3.24e-25 102
Msa0996060 MtrunA17_Chr5g0410961 44.954 109 56 2 4 111 14 119 3.25e-25 101
Msa0996060 MtrunA17_Chr6g0452271 42.500 120 64 3 4 122 14 129 3.71e-25 101
Msa0996060 MtrunA17_Chr8g0342481 48.544 103 49 3 4 103 14 115 5.24e-25 101
Msa0996060 MtrunA17_Chr7g0270891 43.396 106 59 1 4 108 14 119 5.69e-25 101
Msa0996060 MtrunA17_Chr1g0167691 47.525 101 52 1 4 103 14 114 6.03e-25 99.0
Msa0996060 MtrunA17_Chr3g0131121 41.085 129 66 4 4 130 14 134 9.11e-25 99.4
Msa0996060 MtrunA17_Chr4g0058631 43.564 101 56 1 4 103 14 114 9.82e-25 100
Msa0996060 MtrunA17_Chr4g0048511 42.975 121 64 2 4 123 15 131 1.16e-24 100
Msa0996060 MtrunA17_Chr2g0281071 42.735 117 62 2 4 119 15 127 1.27e-24 100
Msa0996060 MtrunA17_Chr6g0470971 42.157 102 56 2 4 103 16 116 1.59e-24 98.6
Msa0996060 MtrunA17_Chr5g0395281 46.078 102 52 2 4 103 14 114 1.64e-24 99.0
Msa0996060 MtrunA17_Chr8g0349261 44.355 124 61 4 4 124 15 133 1.69e-24 99.0
Msa0996060 MtrunA17_Chr1g0193801 41.379 116 66 2 4 117 14 129 1.81e-24 100
Msa0996060 MtrunA17_Chr1g0211161 44.118 102 54 2 4 103 15 115 1.93e-24 97.1
Msa0996060 MtrunA17_Chr3g0117091 45.098 102 53 2 4 103 14 114 2.29e-24 99.4
Msa0996060 MtrunA17_Chr7g0261281 46.535 101 53 1 4 103 14 114 2.42e-24 97.8
Msa0996060 MtrunA17_Chr3g0099131 41.441 111 64 1 4 113 43 153 2.82e-24 100
Msa0996060 MtrunA17_Chr4g0039971 46.078 102 52 2 4 103 15 115 3.07e-24 99.0
Msa0996060 MtrunA17_Chr8g0334881 47.619 105 53 2 4 106 12 116 3.83e-24 98.2
Msa0996060 MtrunA17_Chr1g0193371 43.396 106 57 2 4 107 14 118 4.89e-24 98.6
Msa0996060 MtrunA17_Chr3g0088461 47.525 101 52 1 4 103 24 124 5.52e-24 98.2
Msa0996060 MtrunA17_Chr1g0194951 41.441 111 58 2 4 113 14 118 6.56e-24 98.2
Msa0996060 MtrunA17_Chr6g0453211 46.392 97 51 1 4 99 14 110 7.36e-24 97.4
Msa0996060 MtrunA17_Chr8g0354661 41.593 113 65 1 1 112 36 148 8.04e-24 99.4
Msa0996060 MtrunA17_Chr7g0271241 47.423 97 48 2 4 98 14 109 8.50e-24 98.2
Msa0996060 MtrunA17_Chr2g0323411 42.857 119 65 3 4 119 14 132 9.62e-24 97.4
Msa0996060 MtrunA17_Chr7g0217221 44.554 101 55 1 4 103 14 114 9.91e-24 96.3
Msa0996060 MtrunA17_Chr4g0032401 45.545 101 54 1 4 103 19 119 1.06e-23 97.4
Msa0996060 MtrunA17_Chr3g0080861 43.636 110 61 1 4 112 39 148 1.12e-23 99.0
Msa0996060 MtrunA17_Chr8g0343831 41.748 103 59 1 2 103 8 110 1.27e-23 95.5
Msa0996060 MtrunA17_Chr4g0022881 40.385 104 61 1 4 106 14 117 1.27e-23 95.1
Msa0996060 MtrunA17_Chr1g0192411 37.121 132 75 3 4 134 14 138 1.28e-23 98.2
Msa0996060 MtrunA17_Chr2g0328771 40.336 119 70 1 4 121 22 140 1.39e-23 96.7
Msa0996060 MtrunA17_Chr8g0385321 40.650 123 62 4 4 122 14 129 1.52e-23 96.7
Msa0996060 MtrunA17_Chr5g0434571 38.095 147 82 4 4 146 50 191 1.86e-23 97.1
Msa0996060 MtrunA17_Chr4g0037141 44.118 102 54 2 4 103 14 114 1.97e-23 95.5
Msa0996060 MtrunA17_Chr1g0167661 44.554 101 55 1 4 103 14 114 2.49e-23 94.7
Msa0996060 MtrunA17_Chr5g0434911 36.719 128 75 2 4 125 23 150 2.58e-23 95.1
Msa0996060 MtrunA17_Chr1g0154031 43.636 110 61 1 4 112 78 187 2.65e-23 97.1
Msa0996060 MtrunA17_Chr4g0068061 42.056 107 58 2 4 109 14 117 3.92e-23 95.9
Msa0996060 MtrunA17_Chr1g0180391 44.118 102 54 2 4 103 21 121 4.05e-23 93.6
Msa0996060 MtrunA17_Chr8g0346561 40.952 105 60 2 4 106 14 118 4.32e-23 95.1
Msa0996060 MtrunA17_Chr4g0044421 40.458 131 62 4 3 131 13 129 4.40e-23 92.8
Msa0996060 MtrunA17_Chr5g0417821 44.330 97 53 1 4 99 9 105 4.80e-23 94.7
Msa0996060 MtrunA17_Chr6g0453471 36.691 139 79 3 4 137 14 148 4.82e-23 95.9
Msa0996060 MtrunA17_Chr3g0135311 42.157 102 57 2 4 103 14 115 5.25e-23 95.5
Msa0996060 MtrunA17_Chr5g0400821 40.179 112 60 3 4 108 14 125 5.95e-23 94.7
Msa0996060 MtrunA17_Chr5g0440781 39.048 105 62 2 4 106 14 118 7.38e-23 92.0
Msa0996060 MtrunA17_Chr1g0151941 44.118 102 55 2 4 103 14 115 7.52e-23 93.6
Msa0996060 MtrunA17_Chr2g0327351 45.455 99 50 3 4 99 14 111 8.28e-23 94.7
Msa0996060 MtrunA17_Chr4g0060721 43.564 101 56 1 4 103 15 115 9.67e-23 94.7
Msa0996060 MtrunA17_Chr4g0022891 40.187 107 61 2 4 108 14 119 1.01e-22 92.8
Msa0996060 MtrunA17_Chr6g0450101 33.155 187 92 5 4 173 16 186 1.10e-22 92.0
Msa0996060 MtrunA17_Chr7g0275911 41.584 101 58 1 4 103 14 114 1.20e-22 92.8
Msa0996060 MtrunA17_Chr4g0070641 41.748 103 57 2 3 103 13 114 1.26e-22 90.9
Msa0996060 MtrunA17_Chr7g0228401 48.810 84 43 0 15 98 290 373 1.29e-22 95.9
Msa0996060 MtrunA17_Chr1g0168661 43.590 117 55 3 4 118 23 130 1.70e-22 92.8
Msa0996060 MtrunA17_Chr7g0220341 41.905 105 54 2 4 103 27 129 1.77e-22 92.8
Msa0996060 MtrunA17_Chr4g0070611 42.157 102 56 2 4 103 14 114 1.84e-22 93.6
Msa0996060 MtrunA17_Chr7g0228481 46.875 96 50 1 4 99 220 314 2.02e-22 94.7
Msa0996060 MtrunA17_Chr5g0441131 40.816 98 56 2 4 99 11 108 2.69e-22 90.5
Msa0996060 MtrunA17_Chr5g0434931 42.268 97 55 1 4 99 37 133 2.73e-22 92.4
Msa0996060 MtrunA17_Chr5g0440761 39.048 105 62 2 4 106 14 118 2.93e-22 92.0
Msa0996060 MtrunA17_Chr5g0441141 39.048 105 62 2 4 106 14 118 2.96e-22 92.4
Msa0996060 MtrunA17_Chr5g0434831 42.268 97 55 1 4 99 9 105 2.97e-22 90.5
Msa0996060 MtrunA17_Chr4g0042671 43.119 109 60 2 4 111 14 121 3.18e-22 94.0
Msa0996060 MtrunA17_Chr1g0152011 41.176 102 58 2 4 103 14 115 3.41e-22 93.2
Msa0996060 MtrunA17_Chr3g0110351 39.535 129 71 3 4 130 14 137 3.44e-22 92.8
Msa0996060 MtrunA17_Chr1g0186061 44.898 98 51 2 4 99 22 118 3.63e-22 91.7
Msa0996060 MtrunA17_Chr4g0030881 42.017 119 59 2 1 110 6 123 5.17e-22 91.3
Msa0996060 MtrunA17_Chr1g0209661 41.905 105 60 1 4 107 29 133 5.25e-22 92.4
Msa0996060 MtrunA17_Chr7g0228231 42.574 101 57 1 4 103 16 116 5.92e-22 90.1
Msa0996060 MtrunA17_Chr3g0121241 41.584 101 58 1 4 103 44 144 6.31e-22 92.0
Msa0996060 MtrunA17_Chr4g0072751 43.878 98 53 2 4 99 14 111 7.29e-22 92.4
Msa0996060 MtrunA17_Chr4g0013361 44.762 105 56 2 4 106 12 116 8.36e-22 91.7
Msa0996060 MtrunA17_Chr7g0228991 42.268 97 55 1 4 99 31 127 8.81e-22 90.9
Msa0996060 MtrunA17_Chr4g0054391 43.299 97 53 2 4 98 14 110 8.95e-22 91.3
Msa0996060 MtrunA17_Chr7g0247131 48.454 97 44 2 30 124 5 97 9.90e-22 90.9
Msa0996060 MtrunA17_Chr3g0092401 40.708 113 63 2 4 115 15 124 1.00e-21 91.7
Msa0996060 MtrunA17_Chr7g0254411 42.574 101 57 1 4 103 14 114 1.01e-21 92.0
Msa0996060 MtrunA17_Chr4g0057031 41.322 121 64 4 4 122 14 129 1.51e-21 90.5
Msa0996060 MtrunA17_Chr4g0028311 41.748 103 56 3 4 103 14 115 1.52e-21 91.3
Msa0996060 MtrunA17_Chr7g0240821 43.434 99 53 2 7 103 6 103 1.97e-21 89.4
Msa0996060 MtrunA17_Chr5g0434841 40.594 101 59 1 4 103 22 122 2.03e-21 90.9
Msa0996060 MtrunA17_Chr7g0264641 41.176 102 58 2 4 103 14 115 2.18e-21 90.1
Msa0996060 MtrunA17_Chr2g0322521 45.946 111 57 2 4 112 31 140 2.70e-21 91.3
Msa0996060 MtrunA17_Chr7g0217741 36.090 133 77 3 4 132 14 142 4.58e-21 89.7
Msa0996060 MtrunA17_Chr1g0194291 43.137 102 55 2 4 103 23 123 6.41e-21 88.6
Msa0996060 MtrunA17_Chr1g0194301 40.566 106 60 2 4 107 35 139 6.98e-21 88.6
Msa0996060 MtrunA17_Chr2g0327821 44.444 99 54 1 4 101 8 106 1.52e-20 87.0
Msa0996060 MtrunA17_Chr7g0233061 37.398 123 71 3 4 122 180 300 1.84e-20 88.6
Msa0996060 MtrunA17_Chr7g0238651 35.714 154 87 5 1 151 4 148 3.44e-20 87.8
Msa0996060 MtrunA17_Chr4g0068921 40.000 105 62 1 4 107 26 130 3.48e-20 85.1
Msa0996060 MtrunA17_Chr1g0177901 45.238 84 46 0 15 98 5 88 3.83e-20 85.5
Msa0996060 MtrunA17_Chr2g0293911 44.211 95 52 1 4 97 26 120 1.70e-18 82.8
Msa0996060 MtrunA17_Chr7g0269831 43.564 101 56 1 4 103 14 114 4.62e-18 82.0
Msa0996060 MtrunA17_Chr5g0416341 35.185 108 68 1 7 114 29 134 1.00e-17 81.6
Msa0996060 MtrunA17_Chr6g0487491 40.179 112 53 4 4 103 14 123 1.36e-17 79.3
Msa0996060 MtrunA17_Chr5g0425591 41.975 81 45 2 4 82 11 91 1.38e-17 75.5
Msa0996060 MtrunA17_Chr5g0434901 53.226 62 29 0 37 98 9 70 2.01e-17 75.5
Msa0996060 MtrunA17_Chr8g0362231 37.234 94 59 0 7 100 25 118 7.39e-17 79.0
Msa0996060 MtrunA17_Chr7g0229101 50.794 63 31 0 37 99 8 70 4.97e-16 74.3
Msa0996060 MtrunA17_Chr3g0093811 37.755 98 55 1 37 128 18 115 7.01e-16 74.7
Msa0996060 MtrunA17_Chr3g0099141 42.500 80 45 1 4 82 42 121 1.21e-15 71.6
Msa0996060 MtrunA17_Chr8g0342531 44.156 77 40 2 4 78 14 89 1.58e-15 72.0
Msa0996060 MtrunA17_Chr7g0229131 47.619 63 33 0 37 99 8 70 9.00e-15 70.1
Msa0996060 MtrunA17_Chr8g0342461 45.455 77 40 1 4 78 14 90 9.24e-15 69.3
Msa0996060 MtrunA17_Chr8g0342511 44.000 75 39 2 4 76 14 87 2.47e-14 67.0
Msa0996060 MtrunA17_Chr8g0342471 44.156 77 41 1 4 78 14 90 3.22e-14 67.8
Msa0996060 MtrunA17_Chr4g0042611 42.667 75 42 1 4 77 14 88 7.14e-14 65.5
Msa0996060 MtrunA17_Chr5g0395221 42.667 75 42 1 4 77 14 88 1.25e-13 64.7
Msa0996060 MtrunA17_Chr2g0323321 43.750 80 42 2 4 81 13 91 2.77e-13 64.3
Msa0996060 MtrunA17_Chr6g0483051 32.609 92 61 1 6 97 71 161 3.12e-13 68.6
Msa0996060 MtrunA17_Chr6g0483051 34.021 97 63 1 4 100 120 215 8.59e-11 61.6
Msa0996060 MtrunA17_Chr6g0453751 37.079 89 46 3 4 82 22 110 6.23e-13 63.9
Msa0996060 MtrunA17_Chr7g0274481 36.585 82 52 0 1 82 4 85 1.43e-11 63.9
Msa0996060 MtrunA17_Chr3g0104501 52.941 51 24 0 4 54 133 183 7.98e-11 59.7
Msa0996060 MtrunA17_Chr7g0233151 46.000 50 27 0 54 103 1 50 8.28e-11 59.3
Msa0996060 MtrunA17_Chr3g0104491 50.000 50 25 0 54 103 17 66 9.83e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996060 AT1G17950.1 55.144 243 96 6 1 232 2 242 4.35e-80 241
Msa0996060 AT1G73410.1 50.000 252 90 5 1 231 3 239 3.70e-70 215
Msa0996060 AT1G73410.2 82.727 110 19 0 1 110 3 112 1.07e-61 192
Msa0996060 AT4G33450.1 46.186 236 116 5 2 231 17 247 7.62e-61 192
Msa0996060 AT1G69560.1 65.468 139 45 2 2 137 105 243 1.05e-58 189
Msa0996060 AT1G69560.2 65.942 138 44 2 3 137 122 259 1.59e-58 189
Msa0996060 AT1G26780.1 68.254 126 34 1 1 120 95 220 4.85e-57 183
Msa0996060 AT1G26780.2 68.254 126 34 1 1 120 95 220 2.39e-56 184
Msa0996060 AT5G17800.1 72.897 107 29 0 1 107 90 196 3.75e-55 179
Msa0996060 AT3G29020.1 65.789 114 39 0 1 114 62 175 1.99e-53 172
Msa0996060 AT3G29020.2 65.789 114 39 0 1 114 64 177 7.77e-53 173
Msa0996060 AT5G39700.1 56.731 104 45 0 5 108 57 160 2.01e-38 132
Msa0996060 AT2G39880.1 52.778 108 51 0 4 111 50 157 2.53e-37 134
Msa0996060 AT3G50060.1 56.000 100 44 0 4 103 6 105 1.56e-36 130
Msa0996060 AT3G09230.1 53.448 116 52 1 4 117 55 170 3.88e-36 132
Msa0996060 AT3G55730.1 44.697 132 70 1 4 135 56 184 4.86e-36 132
Msa0996060 AT5G67300.1 56.000 100 44 0 4 103 6 105 1.56e-35 128
Msa0996060 AT3G09370.2 51.327 113 54 1 4 116 135 246 4.57e-33 125
Msa0996060 AT3G09370.3 51.327 113 54 1 4 116 143 254 4.71e-33 125
Msa0996060 AT3G09370.1 51.327 113 54 1 4 116 130 241 5.18e-33 125
Msa0996060 AT2G23290.1 52.000 100 48 0 4 103 13 112 6.18e-33 121
Msa0996060 AT4G37260.1 51.000 100 49 0 4 103 13 112 2.98e-32 120
Msa0996060 AT5G11510.5 39.716 141 80 2 4 142 81 218 8.61e-32 123
Msa0996060 AT5G11510.2 39.716 141 80 2 4 142 81 218 8.75e-32 123
Msa0996060 AT5G11510.3 39.716 141 80 2 4 142 81 218 9.78e-32 123
Msa0996060 AT5G11510.1 39.716 141 80 2 4 142 81 218 9.78e-32 123
Msa0996060 AT5G11510.4 39.716 141 80 2 4 142 81 218 9.78e-32 123
Msa0996060 AT5G02320.3 52.000 100 48 0 4 103 67 166 1.69e-31 120
Msa0996060 AT5G02320.1 52.000 100 48 0 4 103 127 226 1.87e-31 121
Msa0996060 AT5G02320.2 52.000 100 48 0 4 103 127 226 1.87e-31 121
Msa0996060 AT4G32730.1 45.690 116 60 1 4 119 87 199 2.51e-31 121
Msa0996060 AT4G32730.5 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0996060 AT4G32730.4 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0996060 AT4G32730.3 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0996060 AT4G32730.2 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0996060 AT5G40360.1 46.364 110 59 0 1 110 155 264 7.52e-30 114
Msa0996060 AT1G18570.1 41.007 139 72 4 4 138 15 147 3.79e-28 110
Msa0996060 AT3G12720.1 53.608 97 42 2 4 98 24 119 5.18e-28 108
Msa0996060 AT5G54230.1 49.485 97 48 1 4 99 14 110 6.01e-28 108
Msa0996060 AT3G27785.1 48.598 107 55 0 4 110 189 295 6.89e-28 110
Msa0996060 AT5G14750.1 46.535 101 53 1 4 103 18 118 1.17e-27 105
Msa0996060 AT3G23250.1 48.148 108 54 2 4 110 14 120 1.45e-27 107
Msa0996060 AT5G40330.1 46.535 101 53 1 4 103 14 114 1.48e-27 105
Msa0996060 AT4G26930.1 36.364 165 83 4 4 164 21 167 2.01e-27 108
Msa0996060 AT2G26960.1 44.144 111 61 1 3 112 21 131 1.16e-26 107
Msa0996060 AT1G74080.1 36.646 161 87 5 4 157 14 166 1.17e-26 105
Msa0996060 AT2G25230.1 42.308 104 58 2 6 108 28 130 1.46e-26 103
Msa0996060 AT4G25560.1 48.039 102 50 2 4 103 12 112 1.80e-26 103
Msa0996060 AT3G27920.1 45.545 101 54 1 4 103 16 116 2.63e-26 102
Msa0996060 AT3G13890.2 51.579 95 45 1 4 97 14 108 6.13e-26 103
Msa0996060 AT5G58850.1 46.667 105 56 0 4 108 105 209 6.19e-26 105
Msa0996060 AT1G63910.1 45.536 112 60 1 4 114 14 125 7.31e-26 103
Msa0996060 AT4G28110.1 48.454 97 49 1 4 99 14 110 1.11e-25 102
Msa0996060 AT3G11440.2 41.818 110 63 1 4 112 43 152 1.15e-25 104
Msa0996060 AT5G55020.1 42.478 113 64 1 1 112 25 137 1.52e-25 104
Msa0996060 AT5G65230.1 46.078 102 52 2 4 103 14 114 1.78e-25 102
Msa0996060 AT1G79180.1 46.535 101 53 1 4 103 16 116 1.99e-25 101
Msa0996060 AT3G48920.1 47.917 96 49 1 4 98 20 115 2.11e-25 100
Msa0996060 AT3G11440.3 41.818 110 63 1 4 112 43 152 2.18e-25 104
Msa0996060 AT3G11440.4 41.818 110 63 1 4 112 43 152 2.18e-25 104
Msa0996060 AT3G11440.1 41.818 110 63 1 4 112 43 152 2.18e-25 104
Msa0996060 AT5G06100.1 42.727 110 62 1 4 112 34 143 2.27e-25 103
Msa0996060 AT4G05100.1 44.444 117 60 3 4 119 15 127 2.31e-25 102
Msa0996060 AT4G18770.1 48.000 100 52 0 4 103 217 316 2.79e-25 103
Msa0996060 AT5G06100.5 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0996060 AT5G06100.2 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0996060 AT5G06100.3 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0996060 AT5G06100.4 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0996060 AT5G62470.1 39.552 134 77 2 4 136 14 144 4.40e-25 101
Msa0996060 AT2G32460.2 45.045 111 58 2 4 112 8 117 5.37e-25 102
Msa0996060 AT2G32460.1 45.045 111 58 2 4 112 20 129 5.56e-25 102
Msa0996060 AT3G53200.1 46.939 98 49 2 4 99 11 107 5.83e-25 99.0
Msa0996060 AT2G26950.1 38.261 115 62 2 3 112 17 127 6.29e-25 101
Msa0996060 AT2G31180.1 47.525 101 52 1 4 103 14 114 6.59e-25 99.4
Msa0996060 AT5G52600.1 47.959 98 48 2 4 99 14 110 6.59e-25 98.2
Msa0996060 AT5G11050.1 44.762 105 58 0 4 108 105 209 7.04e-25 102
Msa0996060 AT3G13890.1 48.077 104 44 2 4 97 14 117 7.77e-25 101
Msa0996060 AT4G01680.3 43.396 106 59 1 4 108 14 119 8.59e-25 98.6
Msa0996060 AT3G01140.2 45.545 101 54 1 4 103 14 114 1.41e-24 100
Msa0996060 AT3G30210.1 46.392 97 51 1 2 97 27 123 1.75e-24 98.6
Msa0996060 AT3G02940.2 47.423 97 50 1 4 99 14 110 2.01e-24 99.4
Msa0996060 AT3G61250.1 50.000 98 46 2 4 99 14 110 2.11e-24 99.0
Msa0996060 AT1G57560.1 37.908 153 75 6 4 143 14 159 2.14e-24 99.4
Msa0996060 AT5G10280.1 45.098 102 53 2 4 103 14 114 2.17e-24 99.4
Msa0996060 AT3G01140.1 45.545 101 54 1 4 103 57 157 2.19e-24 100
Msa0996060 AT5G23000.1 46.602 103 51 3 4 103 14 115 2.20e-24 99.4
Msa0996060 AT4G00540.2 45.631 103 53 1 4 103 103 205 2.41e-24 100
Msa0996060 AT4G38620.1 34.463 177 88 7 4 159 14 183 2.42e-24 98.6
Msa0996060 AT3G13540.1 35.252 139 88 2 4 140 25 163 2.46e-24 97.8
Msa0996060 AT4G01680.1 43.396 106 59 1 4 108 14 119 2.63e-24 99.4
Msa0996060 AT2G16720.1 38.000 150 79 5 4 146 14 156 2.87e-24 97.8
Msa0996060 AT1G57560.2 36.620 142 79 4 4 141 14 148 3.10e-24 98.2
Msa0996060 AT3G02940.1 47.423 97 50 1 4 99 14 110 3.37e-24 99.0
Msa0996060 AT3G02940.3 47.423 97 50 1 4 99 14 110 3.37e-24 99.0
Msa0996060 AT5G61420.2 35.714 154 92 3 4 154 14 163 3.38e-24 99.4
Msa0996060 AT1G74430.1 44.554 101 55 1 4 103 14 114 3.62e-24 97.8
Msa0996060 AT5G60890.1 40.152 132 70 4 4 133 14 138 4.56e-24 97.8
Msa0996060 AT5G56110.1 45.545 101 54 1 4 103 14 114 4.70e-24 98.2
Msa0996060 AT4G00540.1 45.631 103 53 1 4 103 101 203 4.87e-24 99.8
Msa0996060 AT5G15310.4 44.554 101 55 1 4 103 14 114 4.91e-24 96.7
Msa0996060 AT2G47460.1 30.144 209 135 4 4 201 14 222 5.41e-24 99.0
Msa0996060 AT5G07690.1 44.118 102 56 1 4 104 14 115 5.49e-24 98.6
Msa0996060 AT5G62470.2 40.441 136 74 4 4 136 14 145 5.80e-24 98.6
Msa0996060 AT5G07700.1 41.935 124 67 2 4 126 14 133 5.93e-24 98.6
Msa0996060 AT5G07700.2 41.935 124 67 2 4 126 14 133 5.93e-24 98.6
Msa0996060 AT1G35515.1 36.800 125 70 3 4 125 14 132 5.95e-24 95.9
Msa0996060 AT1G22640.1 37.143 140 73 4 4 135 14 146 6.34e-24 96.7
Msa0996060 AT5G12870.1 45.545 101 54 1 4 103 20 120 6.38e-24 97.4
Msa0996060 AT4G17785.2 46.000 100 51 2 4 101 15 113 7.89e-24 98.2
Msa0996060 AT5G15310.1 44.554 101 55 1 4 103 14 114 8.38e-24 97.8
Msa0996060 AT3G12820.1 46.078 102 52 2 4 103 16 116 9.33e-24 95.9
Msa0996060 AT4G17785.1 46.000 100 51 2 4 101 15 113 9.49e-24 98.2
Msa0996060 AT5G15310.2 44.554 101 55 1 4 103 14 114 1.01e-23 97.4
Msa0996060 AT5G14340.1 47.059 102 51 2 4 103 26 126 1.12e-23 96.7
Msa0996060 AT5G16770.4 41.026 117 64 2 4 119 14 126 1.13e-23 97.4
Msa0996060 AT5G16770.3 41.026 117 64 2 4 119 14 126 1.13e-23 97.4
Msa0996060 AT3G49690.1 41.071 112 62 3 4 111 14 125 1.62e-23 96.7
Msa0996060 AT5G57620.1 41.284 109 62 2 4 110 14 122 1.69e-23 97.1
Msa0996060 AT5G16770.1 41.026 117 64 2 4 119 14 126 1.74e-23 97.1
Msa0996060 AT5G16770.2 41.026 117 64 2 4 119 14 126 1.74e-23 97.1
Msa0996060 AT4G21440.1 46.392 97 51 1 4 99 14 110 2.30e-23 97.1
Msa0996060 AT5G35550.1 43.478 115 59 3 4 116 16 126 2.42e-23 95.1
Msa0996060 AT5G26660.1 41.880 117 64 3 4 117 14 129 2.71e-23 96.7
Msa0996060 AT5G49330.1 42.342 111 57 2 4 113 14 118 3.03e-23 96.7
Msa0996060 AT1G09540.1 42.991 107 58 2 4 108 14 119 3.52e-23 96.7
Msa0996060 AT1G18710.1 38.843 121 69 2 4 123 14 130 3.63e-23 95.1
Msa0996060 AT3G28470.1 47.423 97 50 1 4 99 14 110 3.75e-23 95.9
Msa0996060 AT5G52260.1 47.059 102 51 2 4 103 14 114 3.81e-23 95.1
Msa0996060 AT1G06180.1 46.078 102 52 2 4 103 14 114 3.87e-23 94.4
Msa0996060 AT3G28910.1 44.554 101 55 1 4 103 14 114 5.54e-23 95.5
Msa0996060 AT4G01680.2 40.678 118 57 2 4 108 14 131 6.43e-23 95.9
Msa0996060 AT1G74650.1 43.564 101 56 1 4 103 14 114 7.54e-23 95.1
Msa0996060 AT3G60460.1 45.714 105 55 2 4 106 13 117 7.56e-23 94.7
Msa0996060 AT4G34990.1 39.344 122 65 3 4 122 14 129 9.09e-23 94.0
Msa0996060 AT1G34670.1 43.564 101 56 1 4 103 14 114 1.13e-22 95.1
Msa0996060 AT1G56160.1 43.137 102 55 2 4 103 16 116 1.88e-22 93.6
Msa0996060 AT3G08500.1 45.545 101 54 1 4 103 32 132 1.92e-22 94.4
Msa0996060 AT5G16600.1 40.496 121 65 3 4 122 14 129 2.20e-22 94.0
Msa0996060 AT3G01530.1 45.098 102 53 2 4 103 27 127 2.37e-22 91.3
Msa0996060 AT2G36890.1 41.935 124 65 4 4 124 14 133 2.41e-22 93.2
Msa0996060 AT5G65790.1 43.689 103 54 3 4 103 14 115 2.51e-22 94.4
Msa0996060 AT4G09460.1 39.604 101 60 1 4 103 14 114 3.01e-22 92.0
Msa0996060 AT5G14750.3 42.342 111 58 4 35 142 16 123 3.37e-22 90.1
Msa0996060 AT3G47600.1 44.118 102 54 2 4 103 14 114 3.49e-22 93.6
Msa0996060 AT2G36890.2 41.935 124 65 4 4 124 55 174 4.03e-22 93.6
Msa0996060 AT1G16490.1 43.564 101 56 1 4 103 16 116 1.01e-21 91.3
Msa0996060 AT4G12350.1 42.857 105 57 2 1 103 11 114 1.09e-21 91.3
Msa0996060 AT1G66230.1 39.669 121 66 3 4 122 14 129 1.72e-21 90.9
Msa0996060 AT5G40350.1 41.284 109 58 2 4 111 19 122 2.43e-21 89.0
Msa0996060 AT5G40430.1 31.944 144 92 3 2 140 52 194 2.71e-21 89.7
Msa0996060 AT3G62610.1 41.584 101 58 1 4 103 14 114 3.62e-21 90.9
Msa0996060 AT3G27810.1 42.056 107 56 2 4 109 22 123 4.06e-21 88.6
Msa0996060 AT3G24310.1 46.875 96 48 2 4 97 20 114 4.33e-21 89.4
Msa0996060 AT1G08810.1 42.574 101 57 1 4 103 14 114 5.77e-21 89.4
Msa0996060 AT5G59780.3 41.509 106 61 1 4 108 10 115 5.88e-21 88.6
Msa0996060 AT3G46130.1 42.453 106 60 1 4 108 11 116 6.20e-21 89.0
Msa0996060 AT4G13480.1 46.875 96 48 2 4 97 8 102 6.27e-21 89.0
Msa0996060 AT1G79180.2 36.296 135 50 2 4 103 16 149 7.10e-21 89.7
Msa0996060 AT1G48000.1 44.211 95 52 1 4 97 34 128 8.66e-21 88.2
Msa0996060 AT2G47190.1 43.137 102 55 2 4 103 22 122 1.46e-20 88.2
Msa0996060 AT1G66370.1 39.815 108 60 2 4 108 10 115 2.46e-20 87.0
Msa0996060 AT1G25340.2 39.423 104 59 1 4 107 20 119 3.03e-20 87.4
Msa0996060 AT1G68320.1 41.509 106 59 2 4 107 21 125 3.66e-20 87.4
Msa0996060 AT1G25340.1 39.048 105 63 1 4 107 20 124 3.69e-20 87.0
Msa0996060 AT1G25340.3 39.423 104 59 1 4 107 20 119 4.20e-20 87.4
Msa0996060 AT4G37780.1 38.235 102 61 2 4 103 14 115 4.90e-20 87.0
Msa0996060 AT1G66380.1 41.748 103 55 2 4 103 10 110 1.82e-19 82.0
Msa0996060 AT4G22680.1 38.843 121 67 4 4 122 14 129 2.00e-19 84.7
Msa0996060 AT3G53200.2 53.968 63 29 0 37 99 12 74 2.73e-19 83.2
Msa0996060 AT5G49620.1 45.263 95 51 1 4 97 28 122 4.63e-19 84.7
Msa0996060 AT3G12820.2 52.239 67 32 0 37 103 2 68 1.06e-18 81.3
Msa0996060 AT3G06490.1 42.157 102 56 2 4 103 21 121 1.67e-18 83.2
Msa0996060 AT5G35550.2 48.750 80 38 1 37 116 53 129 1.80e-18 82.0
Msa0996060 AT2G02820.3 37.037 108 66 1 7 114 33 138 2.32e-18 82.8
Msa0996060 AT2G02820.1 37.037 108 66 1 7 114 33 138 3.76e-18 83.2
Msa0996060 AT1G56650.1 39.286 112 67 1 4 114 10 121 4.39e-18 80.9
Msa0996060 AT2G02820.2 37.037 108 66 1 7 114 33 138 5.47e-18 82.8
Msa0996060 AT5G62320.1 42.202 109 53 3 4 103 15 122 8.12e-18 80.1
Msa0996060 AT5G40350.2 48.000 75 34 1 37 111 8 77 1.35e-17 77.8
Msa0996060 AT1G66390.1 40.777 103 56 2 4 103 10 110 1.61e-17 79.3
Msa0996060 AT5G59780.2 48.611 72 37 0 37 108 23 94 2.06e-17 78.6
Msa0996060 AT3G27810.2 49.315 73 32 1 37 109 7 74 2.36e-17 77.4
Msa0996060 AT5G26660.2 45.122 82 44 1 37 117 17 98 2.58e-17 80.1
Msa0996060 AT3G46130.3 48.611 72 37 0 37 108 13 84 2.69e-17 78.2
Msa0996060 AT3G18100.3 38.298 94 58 0 4 97 498 591 3.55e-17 80.9
Msa0996060 AT3G46130.4 48.611 72 37 0 37 108 23 94 3.66e-17 78.2
Msa0996060 AT3G18100.1 38.298 94 58 0 4 97 546 639 3.71e-17 80.9
Msa0996060 AT3G18100.4 38.298 94 58 0 4 97 385 478 4.27e-17 80.5
Msa0996060 AT3G18100.2 37.113 97 61 0 4 100 333 429 4.79e-17 80.5
Msa0996060 AT1G14350.2 39.362 94 57 0 7 100 28 121 5.47e-17 79.7
Msa0996060 AT1G14350.1 39.362 94 57 0 7 100 28 121 5.47e-17 79.7
Msa0996060 AT2G37630.1 33.333 147 85 4 1 144 1 137 3.91e-16 77.0
Msa0996060 AT5G49620.2 39.450 109 51 2 4 97 28 136 1.24e-15 75.1
Msa0996060 AT3G47600.2 49.254 67 34 0 37 103 42 108 1.49e-15 75.1
Msa0996060 AT3G23250.2 50.000 64 31 1 47 110 1 63 1.66e-14 70.9
Msa0996060 AT1G66380.3 47.761 67 35 0 37 103 11 77 1.99e-14 67.8
Msa0996060 AT5G14750.4 47.368 57 30 0 47 103 1 57 2.74e-14 68.2
Msa0996060 AT5G14750.2 47.368 57 30 0 47 103 1 57 2.74e-14 68.2
Msa0996060 AT1G22640.3 35.789 95 49 2 47 135 1 89 5.71e-13 65.9
Msa0996060 AT1G71030.2 40.625 64 38 0 40 103 5 68 6.77e-12 62.8
Msa0996060 AT1G71030.1 40.625 64 38 0 40 103 19 82 8.59e-12 62.8
Msa0996060 AT1G09770.1 36.585 82 52 0 1 82 4 85 1.98e-11 63.9

Find 77 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTCCTATTCTTGAATT+AGG 0.083132 6_4:-73675851 Msa0996060:five_prime_UTR
GAAAGTGAAACTTGGGAAAT+TGG 0.209450 6_4:+73674353 None:intergenic
ACACACATATAATGTATTTA+AGG 0.220182 6_4:-73671844 Msa0996060:three_prime_UTR
AGCATTGTGGAACAAGAATT+TGG 0.234542 6_4:+73674325 None:intergenic
TTTCCCAAGTTTCACTTTCA+TGG 0.262907 6_4:-73674349 Msa0996060:CDS
AAAGGATTTCTGTTTATTCT+TGG 0.284404 6_4:+73674673 None:intergenic
TAATTCCTATTCTTGAATTA+GGG 0.290578 6_4:-73675850 Msa0996060:five_prime_UTR
ATAACTTCTCATCGAATTCA+TGG 0.315936 6_4:-73674625 Msa0996060:CDS
ATCGAATTCATGGTAATAGA+TGG 0.326916 6_4:-73674615 Msa0996060:CDS
AAGAGGGAGAGGACTATAGT+TGG 0.349879 6_4:-73675894 Msa0996060:five_prime_UTR
AATCATAGAACTCAATTGAT+TGG 0.354461 6_4:+73672126 None:intergenic
AAAGCTATGGACCTCATAAT+TGG 0.364887 6_4:-73675696 Msa0996060:CDS
GTTGAGATGGTTCAATCAAT+TGG 0.365948 6_4:-73674698 Msa0996060:CDS
GACTATAGTTGGAGAGGATA+GGG 0.366368 6_4:-73675883 Msa0996060:five_prime_UTR
AGACATGGGAAGAGAATATA+TGG 0.367108 6_4:+73676055 None:intergenic
GCAGCTATGTTGGCAACTTC+CGG 0.382606 6_4:+73671974 None:intergenic
AAGAAAAGTTGAAGATGAAA+AGG 0.389215 6_4:+73675971 None:intergenic
GGAAGTCAATCAAGATGTTA+TGG 0.394645 6_4:-73672045 Msa0996060:CDS
AAGTTTGTTTGATGATCATT+TGG 0.397165 6_4:+73674454 None:intergenic
TCAAGTTCAATTCTTACAAA+TGG 0.401857 6_4:+73671931 None:intergenic
TCTTGTTCCACAATGCTTCA+AGG 0.407745 6_4:-73674319 Msa0996060:intron
CATCTGAGGATGAGAAGCTT+AGG 0.415499 6_4:-73675729 Msa0996060:CDS
AGAAACCCTAATTCAAGAAT+AGG 0.419756 6_4:+73675845 None:intergenic
TTAGAACAATATCTCGATCT+AGG 0.424727 6_4:-73671904 Msa0996060:three_prime_UTR
TACAGCATTATCAGTCCGTC+CGG 0.437863 6_4:+73674570 None:intergenic
GGACTATAGTTGGAGAGGAT+AGG 0.439631 6_4:-73675884 Msa0996060:five_prime_UTR
GTTCAATTCTTACAAATGGT+TGG 0.440324 6_4:+73671935 None:intergenic
ATAATGCTGTAAAGAATCAT+TGG 0.449918 6_4:-73674558 Msa0996060:CDS
TGAGAAGCTTAGGGAGTTGG+TGG 0.459888 6_4:-73675719 Msa0996060:CDS
TGGACCATGAAAGTGAAACT+TGG 0.467936 6_4:+73674345 None:intergenic
GAAAATCTCCGAGGAAGATC+AGG 0.471533 6_4:-73675661 Msa0996060:intron
AGAAAAGTTGAAGATGAAAA+GGG 0.475477 6_4:+73675972 None:intergenic
GGAAAAGTTGTAGGTTGAGA+TGG 0.483490 6_4:-73674711 Msa0996060:CDS
GGATGAGAAGCTTAGGGAGT+TGG 0.485907 6_4:-73675722 Msa0996060:CDS
TCTTCTTCTTCCTCCGTGAA+AGG 0.488479 6_4:+73674655 None:intergenic
ACAAAATTGAAGACAAGAAG+TGG 0.496122 6_4:+73676028 None:intergenic
GCTATGGCGTTCCAATTATG+AGG 0.499293 6_4:+73675685 None:intergenic
GGAGAGGACTATAGTTGGAG+AGG 0.502248 6_4:-73675889 Msa0996060:five_prime_UTR
CCATTATATTGCGAAAATTG+TGG 0.510330 6_4:-73671778 Msa0996060:three_prime_UTR
AAAGGGATATATATAAGAAA+AGG 0.512562 6_4:+73675989 None:intergenic
TGGCGAGGATTCGTCGAGAA+AGG 0.513383 6_4:-73674525 Msa0996060:CDS
AATAAACAGAAATCCTTTCA+CGG 0.521436 6_4:-73674668 Msa0996060:CDS
AGGGAGTTGGTGGAAAGCTA+TGG 0.521525 6_4:-73675709 Msa0996060:CDS
AGGTATAAGATCTATGCAAA+AGG 0.527507 6_4:-73674505 Msa0996060:CDS
ATCTGAGGATGAGAAGCTTA+GGG 0.530955 6_4:-73675728 Msa0996060:CDS
TAGATCAAAGAAAGAGGGAG+AGG 0.532065 6_4:-73675905 Msa0996060:five_prime_UTR
ATCATATAGATCAAAGAAAG+AGG 0.533415 6_4:-73675911 Msa0996060:five_prime_UTR
CTAAGCTTCTCATCCTCAGA+TGG 0.534492 6_4:+73675730 None:intergenic
ACAGCATTATCAGTCCGTCC+GGG 0.534922 6_4:+73674571 None:intergenic
GGACCATGAAAGTGAAACTT+GGG 0.536416 6_4:+73674346 None:intergenic
AAAATTGTGTGATGATCAAG+AGG 0.537064 6_4:+73674481 None:intergenic
CATCCTCAGATGGTCTCCAA+TGG 0.553569 6_4:+73675740 None:intergenic
GAATCATTGGCATGTGATGA+TGG 0.556027 6_4:-73674545 Msa0996060:CDS
TATATTAATATGTGTAGTAG+AGG 0.574832 6_4:-73675763 Msa0996060:exon
TCGAATTCATGGTAATAGAT+GGG 0.576280 6_4:-73674614 Msa0996060:CDS
ATATGTGTAGTAGAGGCCAT+TGG 0.582916 6_4:-73675756 Msa0996060:CDS
AGATGTACCTTGAAGCATTG+TGG 0.585558 6_4:+73674312 None:intergenic
GGGAAGAGAATATATGGTGG+GGG 0.588730 6_4:+73676061 None:intergenic
ATGGGAAGAGAATATATGGT+GGG 0.590124 6_4:+73676059 None:intergenic
GTCATTGCAAGACACTTCCC+CGG 0.595561 6_4:-73674589 Msa0996060:CDS
GATACTTCTCAACAAAAGAG+TGG 0.604960 6_4:+73674416 None:intergenic
ACAAGAAGTGGAAAGAGACA+TGG 0.608601 6_4:+73676040 None:intergenic
CAAGAAGTGGAAAGAGACAT+GGG 0.611099 6_4:+73676041 None:intergenic
TTGCAAGACACTTCCCCGGA+CGG 0.616706 6_4:-73674585 Msa0996060:CDS
CAGCATTATCAGTCCGTCCG+GGG 0.621205 6_4:+73674572 None:intergenic
TCATATAGATCAAAGAAAGA+GGG 0.626177 6_4:-73675910 Msa0996060:five_prime_UTR
AGGCCATTGGAGACCATCTG+AGG 0.626741 6_4:-73675743 Msa0996060:CDS
TAATGCTAGAAGAGATGATG+AGG 0.631566 6_4:-73672066 Msa0996060:CDS
TGGGAAGAGAATATATGGTG+GGG 0.636808 6_4:+73676060 None:intergenic
AAGAGCTATGTGAGACACGA+GGG 0.644268 6_4:+73674377 None:intergenic
TGTTATGGAACTGAAGAACA+AGG 0.658552 6_4:-73672030 Msa0996060:CDS
CATGGGAAGAGAATATATGG+TGG 0.663893 6_4:+73676058 None:intergenic
ATTGGCATGTGATGATGGCG+AGG 0.687951 6_4:-73674540 Msa0996060:CDS
AATTCATGGTAATAGATGGG+CGG 0.709335 6_4:-73674611 Msa0996060:CDS
AAAGAGCTATGTGAGACACG+AGG 0.711201 6_4:+73674376 None:intergenic
GCCATAGCTGAAAATCTCCG+AGG 0.757333 6_4:-73675670 Msa0996060:CDS
AAACAGAAATCCTTTCACGG+AGG 0.765736 6_4:-73674665 Msa0996060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr6_4:73674257-73674276 Msa0996060:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr6_4:73674258-73674277 Msa0996060:intron 0.0%
!! TATATATATATATATATATA+GGG + chr6_4:73674257-73674276 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr6_4:73674258-73674277 None:intergenic 0.0%
!!! AAAATATAAATACGTTTTAT+TGG - chr6_4:73672362-73672381 Msa0996060:intron 10.0%
!! ACTAATTAATTGATTAAATT+CGG - chr6_4:73672546-73672565 Msa0996060:intron 10.0%
!! AAATGTAAAAAAAAATTGTA+GGG - chr6_4:73672645-73672664 Msa0996060:intron 10.0%
!! AAATTAAACTTATAAAATCA+AGG + chr6_4:73673070-73673089 None:intergenic 10.0%
!!! TTTTTTTACTAATAATCTTA+GGG + chr6_4:73673867-73673886 None:intergenic 10.0%
!!! TTTTTTTTACTAATAATCTT+AGG + chr6_4:73673868-73673887 None:intergenic 10.0%
!!! AATAGAATAATTTTTTAAGA+GGG + chr6_4:73673959-73673978 None:intergenic 10.0%
!!! AAATAGAATAATTTTTTAAG+AGG + chr6_4:73673960-73673979 None:intergenic 10.0%
!!! ATTTTATTTTGGTTTTTTAA+CGG + chr6_4:73674807-73674826 None:intergenic 10.0%
!! AAAACCAAAATAAAATATTA+TGG - chr6_4:73674811-73674830 Msa0996060:intron 10.0%
!!! TCATATTAGAAAATTTTTGT+TGG - chr6_4:73672400-73672419 Msa0996060:intron 15.0%
!!! AAGTGATTAAATATTTTTCT+AGG - chr6_4:73672578-73672597 Msa0996060:intron 15.0%
!!! AGTGATTAAATATTTTTCTA+GGG - chr6_4:73672579-73672598 Msa0996060:intron 15.0%
!! CAAATGTAAAAAAAAATTGT+AGG - chr6_4:73672644-73672663 Msa0996060:intron 15.0%
!! ATGTGTTAAAAAATATAGAA+GGG + chr6_4:73672763-73672782 None:intergenic 15.0%
!!! ATTTTGTCTTGAATTTTATT+AGG - chr6_4:73673116-73673135 Msa0996060:intron 15.0%
!!! TTTTGTCTTGAATTTTATTA+GGG - chr6_4:73673117-73673136 Msa0996060:intron 15.0%
!!! TGATGTTATAGTATTAATTT+TGG + chr6_4:73673668-73673687 None:intergenic 15.0%
!! AAATTAATACTATAACATCA+AGG - chr6_4:73673668-73673687 Msa0996060:intron 15.0%
!! TAAATTAAAGAAAGTTCAAT+AGG - chr6_4:73673729-73673748 Msa0996060:intron 15.0%
!! TCAACAAAAATTAATGTATT+TGG + chr6_4:73674719-73674738 None:intergenic 15.0%
!!! TCAATTTTTACTTACATTTT+AGG - chr6_4:73674739-73674758 Msa0996060:intron 15.0%
!!! ACAACCATAATATTTTATTT+TGG + chr6_4:73674818-73674837 None:intergenic 15.0%
!! AGTATATGAAGAAAAAAAAA+GGG + chr6_4:73675316-73675335 None:intergenic 15.0%
!! AAGTATATGAAGAAAAAAAA+AGG + chr6_4:73675317-73675336 None:intergenic 15.0%
!!! TATATATACCAATTTTCTAA+TGG - chr6_4:73675649-73675668 Msa0996060:intron 15.0%
!! AAAGGGATATATATAAGAAA+AGG + chr6_4:73671863-73671882 None:intergenic 20.0%
!! ATAATTCCTATTCTTGAATT+AGG - chr6_4:73671998-73672017 Msa0996060:CDS 20.0%
!! TAATTCCTATTCTTGAATTA+GGG - chr6_4:73671999-73672018 Msa0996060:CDS 20.0%
!!! TTATCGTAATTTTTTTAGCT+AGG - chr6_4:73672059-73672078 Msa0996060:CDS 20.0%
!! TATATTAATATGTGTAGTAG+AGG - chr6_4:73672086-73672105 Msa0996060:CDS 20.0%
!! GATGTGTTAAAAAATATAGA+AGG + chr6_4:73672764-73672783 None:intergenic 20.0%
!! AAGTAAATGATTTATTGAGA+CGG - chr6_4:73672784-73672803 Msa0996060:intron 20.0%
!!! ATTTTCTTGTGTGTATATAA+GGG - chr6_4:73672853-73672872 Msa0996060:intron 20.0%
!! TCATTTAATCCAACATTATA+AGG - chr6_4:73672910-73672929 Msa0996060:intron 20.0%
!! TTATATTGAAGTCATCTATA+GGG + chr6_4:73673574-73673593 None:intergenic 20.0%
!! TTTATATTGAAGTCATCTAT+AGG + chr6_4:73673575-73673594 None:intergenic 20.0%
!! AACTCATTAAATCAATTACA+TGG - chr6_4:73673758-73673777 Msa0996060:intron 20.0%
!!! GTTAATTGTTTTTAGTCTTA+GGG + chr6_4:73673898-73673917 None:intergenic 20.0%
!!! AGTTAATTGTTTTTAGTCTT+AGG + chr6_4:73673899-73673918 None:intergenic 20.0%
!!! TTAGAAAGTTAGATAAGTTT+TGG + chr6_4:73674016-73674035 None:intergenic 20.0%
!!! CATTTTGACTAAAACAAATA+CGG - chr6_4:73674192-73674211 Msa0996060:intron 20.0%
!!! CATTTTTCAGAGAATATAAT+CGG + chr6_4:73674631-73674650 None:intergenic 20.0%
!!! TTTTTACTTACATTTTAGGA+CGG - chr6_4:73674743-73674762 Msa0996060:intron 20.0%
!!! TTTTTAACGGTACAAATAAT+TGG + chr6_4:73674794-73674813 None:intergenic 20.0%
!!! ACGGTTTAATTTCTTTTTTT+TGG - chr6_4:73675145-73675164 Msa0996060:intron 20.0%
!! AAAAAAAAAGGGAAATAATC+TGG + chr6_4:73675305-73675324 None:intergenic 20.0%
!! ACACACATATAATGTATTTA+AGG - chr6_4:73676005-73676024 Msa0996060:five_prime_UTR 20.0%
! AGAAAAGTTGAAGATGAAAA+GGG + chr6_4:73671880-73671899 None:intergenic 25.0%
! AAGAAAAGTTGAAGATGAAA+AGG + chr6_4:73671881-73671900 None:intergenic 25.0%
! ATCATATAGATCAAAGAAAG+AGG - chr6_4:73671938-73671957 Msa0996060:three_prime_UTR 25.0%
! TCATATAGATCAAAGAAAGA+GGG - chr6_4:73671939-73671958 Msa0996060:three_prime_UTR 25.0%
! GATCATAATTTGAGGAAATT+AGG - chr6_4:73672439-73672458 Msa0996060:intron 25.0%
!!! ATTTTTTTTCCACATGCTTT+TGG - chr6_4:73672696-73672715 Msa0996060:intron 25.0%
!! GATTTTCTTGTGTGTATATA+AGG - chr6_4:73672852-73672871 Msa0996060:intron 25.0%
! AAAAGACAACCTTATAATGT+TGG + chr6_4:73672922-73672941 None:intergenic 25.0%
! TTAGTATGAATTTCATGTCT+AGG - chr6_4:73672964-73672983 Msa0996060:intron 25.0%
! ATATGAGAATGATAATTTGG+TGG + chr6_4:73673046-73673065 None:intergenic 25.0%
! GGAATATGAGAATGATAATT+TGG + chr6_4:73673049-73673068 None:intergenic 25.0%
!! TTTTATTAGGGAAAAGTTGT+AGG - chr6_4:73673129-73673148 Msa0996060:intron 25.0%
! AAAGGATTTCTGTTTATTCT+TGG + chr6_4:73673179-73673198 None:intergenic 25.0%
! AATAAACAGAAATCCTTTCA+CGG - chr6_4:73673181-73673200 Msa0996060:intron 25.0%
! ATAATGCTGTAAAGAATCAT+TGG - chr6_4:73673291-73673310 Msa0996060:intron 25.0%
!! AAGTTTGTTTGATGATCATT+TGG + chr6_4:73673398-73673417 None:intergenic 25.0%
! TGATTATAGAATTACCATCA+TGG - chr6_4:73673599-73673618 Msa0996060:intron 25.0%
!! TTTGAAATTGTGATACATCA+TGG - chr6_4:73673622-73673641 Msa0996060:intron 25.0%
!!! TAATTTTTTAAGAGGGTATG+AGG + chr6_4:73673952-73673971 None:intergenic 25.0%
!! CAGGTTTTACTTTAGTTAAA+AGG + chr6_4:73674047-73674066 None:intergenic 25.0%
! TTCATTCTCTAATAAATGTG+TGG + chr6_4:73674144-73674163 None:intergenic 25.0%
! ATTTATTAGAGAATGAACGT+GGG - chr6_4:73674147-73674166 Msa0996060:intron 25.0%
!! GTTGACTAATTTTTGCTTAA+CGG + chr6_4:73674665-73674684 None:intergenic 25.0%
! CTAAAAAGTTCATGAATTGT+CGG - chr6_4:73675120-73675139 Msa0996060:intron 25.0%
! CTTTAAACAGTATAGCAAAA+TGG + chr6_4:73675454-73675473 None:intergenic 25.0%
!! TATACTGTTTAAAGTGTCAA+AGG - chr6_4:73675460-73675479 Msa0996060:intron 25.0%
! ATATAACCTCTAAATATGTG+CGG + chr6_4:73675565-73675584 None:intergenic 25.0%
! ATCAATGACCATTAGAAAAT+TGG + chr6_4:73675660-73675679 None:intergenic 25.0%
! AATCATAGAACTCAATTGAT+TGG + chr6_4:73675726-73675745 None:intergenic 25.0%
!!! ATCAGTTACTTCACTTTTAT+TGG + chr6_4:73675764-73675783 None:intergenic 25.0%
!!! TTCATTGATTTTTTGTCTAC+CGG - chr6_4:73675856-73675875 Msa0996060:five_prime_UTR 25.0%
! TCAAGTTCAATTCTTACAAA+TGG + chr6_4:73675921-73675940 None:intergenic 25.0%
ACAAAATTGAAGACAAGAAG+TGG + chr6_4:73671824-73671843 None:intergenic 30.0%
AGAAACCCTAATTCAAGAAT+AGG + chr6_4:73672007-73672026 None:intergenic 30.0%
!!! CGTAATTTTTTTAGCTAGGA+AGG - chr6_4:73672063-73672082 Msa0996060:CDS 30.0%
! TAATTTTACCTGATCTTCCT+CGG + chr6_4:73672199-73672218 None:intergenic 30.0%
TTTCTTGTATACATACTCGA+TGG + chr6_4:73672296-73672315 None:intergenic 30.0%
TGATAGCATACTTAACTCTT+AGG - chr6_4:73672317-73672336 Msa0996060:intron 30.0%
!!! TAAAGTAGCCATATTTTAGC+TGG - chr6_4:73672507-73672526 Msa0996060:intron 30.0%
!!! AAAGTAGCCATATTTTAGCT+GGG - chr6_4:73672508-73672527 Msa0996060:intron 30.0%
TATTGAGACGGAACTATAAT+TGG - chr6_4:73672796-73672815 Msa0996060:intron 30.0%
ATTGAGACGGAACTATAATT+GGG - chr6_4:73672797-73672816 Msa0996060:intron 30.0%
! TTGTGTGTATATAAGGGTTT+TGG - chr6_4:73672859-73672878 Msa0996060:intron 30.0%
TATGAATTTCATGTCTAGGA+TGG - chr6_4:73672968-73672987 Msa0996060:intron 30.0%
! ATGAATTTCATGTCTAGGAT+GGG - chr6_4:73672969-73672988 Msa0996060:intron 30.0%
TAAAGACTGTAGTGATAAGA+AGG + chr6_4:73673008-73673027 None:intergenic 30.0%
ATAACTTCTCATCGAATTCA+TGG - chr6_4:73673224-73673243 Msa0996060:intron 30.0%
ATCGAATTCATGGTAATAGA+TGG - chr6_4:73673234-73673253 Msa0996060:intron 30.0%
TCGAATTCATGGTAATAGAT+GGG - chr6_4:73673235-73673254 Msa0996060:intron 30.0%
AGGTATAAGATCTATGCAAA+AGG - chr6_4:73673344-73673363 Msa0996060:intron 30.0%
AAAATTGTGTGATGATCAAG+AGG + chr6_4:73673371-73673390 None:intergenic 30.0%
ATCACAATTTCAAACCATGA+TGG + chr6_4:73673616-73673635 None:intergenic 30.0%
AGTTGTTAATTAAGTAGGGA+GGG + chr6_4:73673842-73673861 None:intergenic 30.0%
TAGTTGTTAATTAAGTAGGG+AGG + chr6_4:73673843-73673862 None:intergenic 30.0%
! GGCTAGTTGTTAATTAAGTA+GGG + chr6_4:73673846-73673865 None:intergenic 30.0%
GATGAAATGTATCATAGTAG+TGG + chr6_4:73674094-73674113 None:intergenic 30.0%
! TGAATAGTTTAGAGTTGGTT+GGG + chr6_4:73674121-73674140 None:intergenic 30.0%
CATTTATTAGAGAATGAACG+TGG - chr6_4:73674146-73674165 Msa0996060:intron 30.0%
TTTGACTAAAACAAATACGG+AGG - chr6_4:73674195-73674214 Msa0996060:intron 30.0%
ATAAAAGACACCTTCACAAA+AGG + chr6_4:73674363-73674382 None:intergenic 30.0%
!! AAAGACACCAACTTACTTTT+AGG - chr6_4:73674408-73674427 Msa0996060:CDS 30.0%
AAAGTGAAAATCACACCTTA+AGG - chr6_4:73674460-73674479 Msa0996060:CDS 30.0%
! TTTTATCAAGTCACACCTTA+AGG + chr6_4:73674478-73674497 None:intergenic 30.0%
! ACTAATTTTTGCTTAACGGA+GGG + chr6_4:73674661-73674680 None:intergenic 30.0%
!! GAAGCTTTTTCCTTTCTTTT+CGG + chr6_4:73674877-73674896 None:intergenic 30.0%
! GCAATTTGAGATATATCCTA+CGG + chr6_4:73674945-73674964 None:intergenic 30.0%
!!! CTTTTTTTTGGTTCTGTCTT+TGG - chr6_4:73675157-73675176 Msa0996060:intron 30.0%
ATAAGTCGCTAACATATCAT+AGG - chr6_4:73675361-73675380 Msa0996060:intron 30.0%
ACAGTATAGCAAAATGGTTT+GGG + chr6_4:73675448-73675467 None:intergenic 30.0%
AACAGTATAGCAAAATGGTT+TGG + chr6_4:73675449-73675468 None:intergenic 30.0%
AGGATCTAGACATTTGATAT+TGG + chr6_4:73675530-73675549 None:intergenic 30.0%
AAATATGTGCGGTAAAATCA+GGG + chr6_4:73675554-73675573 None:intergenic 30.0%
TAAATATGTGCGGTAAAATC+AGG + chr6_4:73675555-73675574 None:intergenic 30.0%
! ATTTTACCGCACATATTTAG+AGG - chr6_4:73675556-73675575 Msa0996060:intron 30.0%
! ACTTAATTTTGCAGCTATGT+TGG + chr6_4:73675888-73675907 None:intergenic 30.0%
GTTCAATTCTTACAAATGGT+TGG + chr6_4:73675917-73675936 None:intergenic 30.0%
TTAGAACAATATCTCGATCT+AGG - chr6_4:73675945-73675964 Msa0996060:five_prime_UTR 30.0%
! CCACAATTTTCGCAATATAA+TGG + chr6_4:73676074-73676093 None:intergenic 30.0%
CCATTATATTGCGAAAATTG+TGG - chr6_4:73676071-73676090 Msa0996060:five_prime_UTR 30.0%
ATGGGAAGAGAATATATGGT+GGG + chr6_4:73671793-73671812 None:intergenic 35.0%
AGACATGGGAAGAGAATATA+TGG + chr6_4:73671797-73671816 None:intergenic 35.0%
AAAGCTATGGACCTCATAAT+TGG - chr6_4:73672153-73672172 Msa0996060:intron 35.0%
CAAATTATGATCTAGCTGTG+TGG + chr6_4:73672431-73672450 None:intergenic 35.0%
CACAGCTAGATCATAATTTG+AGG - chr6_4:73672431-73672450 Msa0996060:intron 35.0%
ACCAATACCCAGCTAAAATA+TGG + chr6_4:73672518-73672537 None:intergenic 35.0%
GAAAATCTCTTTCACTATGC+TGG + chr6_4:73672839-73672858 None:intergenic 35.0%
!! AGAATGATAATTTGGTGGTG+GGG + chr6_4:73673041-73673060 None:intergenic 35.0%
! GAGAATGATAATTTGGTGGT+GGG + chr6_4:73673042-73673061 None:intergenic 35.0%
! TGAGAATGATAATTTGGTGG+TGG + chr6_4:73673043-73673062 None:intergenic 35.0%
GTTGAGATGGTTCAATCAAT+TGG - chr6_4:73673151-73673170 Msa0996060:intron 35.0%
AATTCATGGTAATAGATGGG+CGG - chr6_4:73673238-73673257 Msa0996060:intron 35.0%
GATACTTCTCAACAAAAGAG+TGG + chr6_4:73673436-73673455 None:intergenic 35.0%
GAAAGTGAAACTTGGGAAAT+TGG + chr6_4:73673499-73673518 None:intergenic 35.0%
TTTCCCAAGTTTCACTTTCA+TGG - chr6_4:73673500-73673519 Msa0996060:intron 35.0%
AGCATTGTGGAACAAGAATT+TGG + chr6_4:73673527-73673546 None:intergenic 35.0%
ATGGACCAAAGTTATTCACA+GGG - chr6_4:73673777-73673796 Msa0996060:intron 35.0%
!! GGGCTAGTTGTTAATTAAGT+AGG + chr6_4:73673847-73673866 None:intergenic 35.0%
! GTGAATAGTTTAGAGTTGGT+TGG + chr6_4:73674122-73674141 None:intergenic 35.0%
! TGTGGTGAATAGTTTAGAGT+TGG + chr6_4:73674126-73674145 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG - chr6_4:73674350-73674369 Msa0996060:CDS 35.0%
!! ACACCAACTTACTTTTAGGA+AGG - chr6_4:73674412-73674431 Msa0996060:CDS 35.0%
ACACCTTCCTAAAAGTAAGT+TGG + chr6_4:73674418-73674437 None:intergenic 35.0%
TTGATAAAAGACACCACCAA+AGG - chr6_4:73674489-73674508 Msa0996060:CDS 35.0%
TGATAAAAGACACCACCAAA+GGG - chr6_4:73674490-73674509 Msa0996060:CDS 35.0%
! CGGTTCAAAAAAGTACAACT+CGG + chr6_4:73674611-73674630 None:intergenic 35.0%
! GACTAATTTTTGCTTAACGG+AGG + chr6_4:73674662-73674681 None:intergenic 35.0%
!!! TACTTACATTTTAGGACGGA+AGG - chr6_4:73674747-73674766 Msa0996060:intron 35.0%
! TTTTTCCTTTCTTTTCGGTG+TGG + chr6_4:73674872-73674891 None:intergenic 35.0%
TGTATACGCACGAAAAACAA+CGG - chr6_4:73674908-73674927 Msa0996060:intron 35.0%
AACGGATGATATTTAACCGT+AGG - chr6_4:73674926-73674945 Msa0996060:intron 35.0%
! TCACAGTTCATTTCTTTTCG+AGG + chr6_4:73675065-73675084 None:intergenic 35.0%
CGAAAAGAAATGAACTGTGA+CGG - chr6_4:73675065-73675084 Msa0996060:intron 35.0%
! TTTTTCTAAACAGCCCTAAG+TGG - chr6_4:73675180-73675199 Msa0996060:intron 35.0%
AAAAGGGAAATAATCTGGTG+TGG + chr6_4:73675300-73675319 None:intergenic 35.0%
CATATCATAGGTTTCTCTCT+TGG - chr6_4:73675373-73675392 Msa0996060:intron 35.0%
CTAGACATTTGATATTGGTG+TGG + chr6_4:73675525-73675544 None:intergenic 35.0%
AATATGTGCGGTAAAATCAG+GGG + chr6_4:73675553-73675572 None:intergenic 35.0%
TAATGCTAGAAGAGATGATG+AGG - chr6_4:73675783-73675802 Msa0996060:five_prime_UTR 35.0%
GGAAGTCAATCAAGATGTTA+TGG - chr6_4:73675804-73675823 Msa0996060:five_prime_UTR 35.0%
TGTTATGGAACTGAAGAACA+AGG - chr6_4:73675819-73675838 Msa0996060:five_prime_UTR 35.0%
! AATATATGGTGGGGGAAGAT+GGG + chr6_4:73671783-73671802 None:intergenic 40.0%
TGGGAAGAGAATATATGGTG+GGG + chr6_4:73671792-73671811 None:intergenic 40.0%
CATGGGAAGAGAATATATGG+TGG + chr6_4:73671794-73671813 None:intergenic 40.0%
CAAGAAGTGGAAAGAGACAT+GGG + chr6_4:73671811-73671830 None:intergenic 40.0%
ACAAGAAGTGGAAAGAGACA+TGG + chr6_4:73671812-73671831 None:intergenic 40.0%
TAGATCAAAGAAAGAGGGAG+AGG - chr6_4:73671944-73671963 Msa0996060:exon 40.0%
GACTATAGTTGGAGAGGATA+GGG - chr6_4:73671966-73671985 Msa0996060:CDS 40.0%
ATATGTGTAGTAGAGGCCAT+TGG - chr6_4:73672093-73672112 Msa0996060:CDS 40.0%
ATCTGAGGATGAGAAGCTTA+GGG - chr6_4:73672121-73672140 Msa0996060:CDS 40.0%
!!! GCCATATTTTAGCTGGGTAT+TGG - chr6_4:73672514-73672533 Msa0996060:intron 40.0%
! TAAGTGCAACCAAAAGCATG+TGG + chr6_4:73672708-73672727 None:intergenic 40.0%
AAATTGTGTGCATGAGTGGA+GGG + chr6_4:73672732-73672751 None:intergenic 40.0%
ACTCAAATTGTGTGCATGAG+TGG + chr6_4:73672736-73672755 None:intergenic 40.0%
ACTGTAGTGATAAGAAGGTC+AGG + chr6_4:73673003-73673022 None:intergenic 40.0%
! GGAAAAGTTGTAGGTTGAGA+TGG - chr6_4:73673138-73673157 Msa0996060:intron 40.0%
AAACAGAAATCCTTTCACGG+AGG - chr6_4:73673184-73673203 Msa0996060:intron 40.0%
GAATCATTGGCATGTGATGA+TGG - chr6_4:73673304-73673323 Msa0996060:intron 40.0%
GGACCATGAAAGTGAAACTT+GGG + chr6_4:73673506-73673525 None:intergenic 40.0%
TGGACCATGAAAGTGAAACT+TGG + chr6_4:73673507-73673526 None:intergenic 40.0%
TCTTGTTCCACAATGCTTCA+AGG - chr6_4:73673530-73673549 Msa0996060:intron 40.0%
!! AGATGTACCTTGAAGCATTG+TGG + chr6_4:73673540-73673559 None:intergenic 40.0%
CATGGACCAAAGTTATTCAC+AGG - chr6_4:73673776-73673795 Msa0996060:intron 40.0%
!! GATCATTTTTCGCAACATGC+AGG + chr6_4:73674066-73674085 None:intergenic 40.0%
TTATGTTACAAGCCACCCTT+TGG + chr6_4:73674508-73674527 None:intergenic 40.0%
AGTTCATGAATTGTCGGTCA+CGG - chr6_4:73675126-73675145 Msa0996060:intron 40.0%
CTTGGATACTCATTCATGAG+AGG + chr6_4:73675213-73675232 None:intergenic 40.0%
CCAAGCTAACACAAAGACTT+CGG - chr6_4:73675228-73675247 Msa0996060:intron 40.0%
GACACTAAGTAGGTATGAGT+TGG + chr6_4:73675615-73675634 None:intergenic 40.0%
! GAATATATGGTGGGGGAAGA+TGG + chr6_4:73671784-73671803 None:intergenic 45.0%
GGGAAGAGAATATATGGTGG+GGG + chr6_4:73671791-73671810 None:intergenic 45.0%
AAGAGGGAGAGGACTATAGT+TGG - chr6_4:73671955-73671974 Msa0996060:exon 45.0%
GGACTATAGTTGGAGAGGAT+AGG - chr6_4:73671965-73671984 Msa0996060:CDS 45.0%
CTAAGCTTCTCATCCTCAGA+TGG + chr6_4:73672122-73672141 None:intergenic 45.0%
CATCTGAGGATGAGAAGCTT+AGG - chr6_4:73672120-73672139 Msa0996060:CDS 45.0%
GCTATGGCGTTCCAATTATG+AGG + chr6_4:73672167-73672186 None:intergenic 45.0%
! TCCTCGGAGATTTTCAGCTA+TGG + chr6_4:73672183-73672202 None:intergenic 45.0%
GAAAATCTCCGAGGAAGATC+AGG - chr6_4:73672188-73672207 Msa0996060:intron 45.0%
AATTGTGTGCATGAGTGGAG+GGG + chr6_4:73672731-73672750 None:intergenic 45.0%
CAAATTGTGTGCATGAGTGG+AGG + chr6_4:73672733-73672752 None:intergenic 45.0%
!! TGATAATTTGGTGGTGGGGA+TGG + chr6_4:73673037-73673056 None:intergenic 45.0%
TCTTCTTCTTCCTCCGTGAA+AGG + chr6_4:73673197-73673216 None:intergenic 45.0%
TACAGCATTATCAGTCCGTC+CGG + chr6_4:73673282-73673301 None:intergenic 45.0%
AAGAGCTATGTGAGACACGA+GGG + chr6_4:73673475-73673494 None:intergenic 45.0%
AAAGAGCTATGTGAGACACG+AGG + chr6_4:73673476-73673495 None:intergenic 45.0%
GCTGACCCTGTGAATAACTT+TGG + chr6_4:73673785-73673804 None:intergenic 45.0%
!! TTGGCTTGTTGTAGCTAGCT+TGG + chr6_4:73673997-73674016 None:intergenic 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr6_4:73674493-73674512 Msa0996060:CDS 45.0%
!!! ATTTTAGGACGGAAGGACTG+AGG - chr6_4:73674754-73674773 Msa0996060:intron 45.0%
!!! TTTTAGGACGGAAGGACTGA+GGG - chr6_4:73674755-73674774 Msa0996060:intron 45.0%
TCAAGCCACACCGAAAAGAA+AGG - chr6_4:73674864-73674883 Msa0996060:intron 45.0%
CGAAGGAATTGACGCAAGAA+TGG + chr6_4:73675028-73675047 None:intergenic 45.0%
AGGAATGCTATAGAGTGCGA+AGG + chr6_4:73675045-73675064 None:intergenic 45.0%
TTCTAAACAGCCCTAAGTGG+TGG - chr6_4:73675183-73675202 Msa0996060:intron 45.0%
CCGAAGTCTTTGTGTTAGCT+TGG + chr6_4:73675231-73675250 None:intergenic 45.0%
AAGACTTCGGATTGTACCCA+TGG - chr6_4:73675241-73675260 Msa0996060:intron 45.0%
AGACTTCGGATTGTACCCAT+GGG - chr6_4:73675242-73675261 Msa0996060:intron 45.0%
TCCATCAAGCATAAACCGCT+AGG + chr6_4:73675399-73675418 None:intergenic 45.0%
GAGAGAGAGAGACACTAAGT+AGG + chr6_4:73675625-73675644 None:intergenic 45.0%
GGAGAGGACTATAGTTGGAG+AGG - chr6_4:73671960-73671979 Msa0996060:exon 50.0%
CATCCTCAGATGGTCTCCAA+TGG + chr6_4:73672112-73672131 None:intergenic 50.0%
GGATGAGAAGCTTAGGGAGT+TGG - chr6_4:73672127-73672146 Msa0996060:CDS 50.0%
TGAGAAGCTTAGGGAGTTGG+TGG - chr6_4:73672130-73672149 Msa0996060:CDS 50.0%
!! AGGGAGTTGGTGGAAAGCTA+TGG - chr6_4:73672140-73672159 Msa0996060:intron 50.0%
GCCATAGCTGAAAATCTCCG+AGG - chr6_4:73672179-73672198 Msa0996060:intron 50.0%
!! TAATTTGGTGGTGGGGATGG+AGG + chr6_4:73673034-73673053 None:intergenic 50.0%
GTCATTGCAAGACACTTCCC+CGG - chr6_4:73673260-73673279 Msa0996060:intron 50.0%
ACAGCATTATCAGTCCGTCC+GGG + chr6_4:73673281-73673300 None:intergenic 50.0%
!! ATTGGCATGTGATGATGGCG+AGG - chr6_4:73673309-73673328 Msa0996060:intron 50.0%
! TGTTGTAGCTAGCTTGGTCG+TGG + chr6_4:73673991-73674010 None:intergenic 50.0%
TGTTACAAGCCACCCTTTGG+TGG + chr6_4:73674505-73674524 None:intergenic 50.0%
GAATGGCACACGATACATGC+TGG + chr6_4:73675011-73675030 None:intergenic 50.0%
! GAGAGGTTAGCCACCACTTA+GGG + chr6_4:73675196-73675215 None:intergenic 50.0%
! TGAGAGGTTAGCCACCACTT+AGG + chr6_4:73675197-73675216 None:intergenic 50.0%
CTAACAGTGGATCCACCCAT+GGG + chr6_4:73675260-73675279 None:intergenic 50.0%
ATCCACTGTTAGGCATGGTG+TGG - chr6_4:73675268-73675287 Msa0996060:intron 50.0%
AGGTTTCTCTCTTGGCCTAG+CGG - chr6_4:73675381-73675400 Msa0996060:intron 50.0%
GCCTAGCGGTTTATGCTTGA+TGG - chr6_4:73675395-73675414 Msa0996060:intron 50.0%
ATGTGCGGTAAAATCAGGGG+AGG + chr6_4:73675550-73675569 None:intergenic 50.0%
GCAGCTATGTTGGCAACTTC+CGG + chr6_4:73675878-73675897 None:intergenic 50.0%
AGGCCATTGGAGACCATCTG+AGG - chr6_4:73672106-73672125 Msa0996060:CDS 55.0%
TTGCAAGACACTTCCCCGGA+CGG - chr6_4:73673264-73673283 Msa0996060:intron 55.0%
CAGCATTATCAGTCCGTCCG+GGG + chr6_4:73673280-73673299 None:intergenic 55.0%
TGGCGAGGATTCGTCGAGAA+AGG - chr6_4:73673324-73673343 Msa0996060:intron 55.0%
CTTCGGATTGTACCCATGGG+TGG - chr6_4:73675245-73675264 Msa0996060:intron 55.0%
CCTAACAGTGGATCCACCCA+TGG + chr6_4:73675261-73675280 None:intergenic 55.0%
CCATGGGTGGATCCACTGTT+AGG - chr6_4:73675258-73675277 Msa0996060:intron 55.0%
GGTGGATCCACTGTTAGGCA+TGG - chr6_4:73675263-73675282 Msa0996060:intron 55.0%
TGCCACACCATGCCTAACAG+TGG + chr6_4:73675273-73675292 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 73671771 73676100 73671771 ID=Msa0996060;Name=Msa0996060
chr6_4 mRNA 73671771 73676100 73671771 ID=Msa0996060-mRNA-1;Parent=Msa0996060;Name=Msa0996060-mRNA-1;_AED=0.02;_eAED=0.02;_QI=324|1|1|1|1|1|3|191|240
chr6_4 exon 73671771 73672155 73671771 ID=Msa0996060-mRNA-1:exon:13700;Parent=Msa0996060-mRNA-1
chr6_4 exon 73674320 73674733 73674320 ID=Msa0996060-mRNA-1:exon:13699;Parent=Msa0996060-mRNA-1
chr6_4 exon 73675662 73676100 73675662 ID=Msa0996060-mRNA-1:exon:13698;Parent=Msa0996060-mRNA-1
chr6_4 five_prime_UTR 73675777 73676100 73675777 ID=Msa0996060-mRNA-1:five_prime_utr;Parent=Msa0996060-mRNA-1
chr6_4 CDS 73675662 73675776 73675662 ID=Msa0996060-mRNA-1:cds;Parent=Msa0996060-mRNA-1
chr6_4 CDS 73674320 73674733 73674320 ID=Msa0996060-mRNA-1:cds;Parent=Msa0996060-mRNA-1
chr6_4 CDS 73671962 73672155 73671962 ID=Msa0996060-mRNA-1:cds;Parent=Msa0996060-mRNA-1
chr6_4 three_prime_UTR 73671771 73671961 73671771 ID=Msa0996060-mRNA-1:three_prime_utr;Parent=Msa0996060-mRNA-1
Gene Sequence

>Msa0996060

ATGTGTAGTAGAGGCCATTGGAGACCATCTGAGGATGAGAAGCTTAGGGAGTTGGTGGAAAGCTATGGACCTCATAATTGGAACGCCATAGCTGAAAATCTCCGAGGAAGATCAGGGAAAAGTTGTAGGTTGAGATGGTTCAATCAATTGGATCCAAGAATAAACAGAAATCCTTTCACGGAGGAAGAAGAAGAGCGTCTTATAACTTCTCATCGAATTCATGGTAATAGATGGGCGGTCATTGCAAGACACTTCCCCGGACGGACTGATAATGCTGTAAAGAATCATTGGCATGTGATGATGGCGAGGATTCGTCGAGAAAGGTATAAGATCTATGCAAAAGGTCCTCTTGATCATCACACAATTTTCTCTCCAAATGATCATCAAACAAACTTTGAGAGAACAAATCTCCACTCTTTTGTTGAGAAGTATCATGAAAAGCATAATCACCCTCGTGTCTCACATAGCTCTTTCCAATTTCCCAAGTTTCACTTTCATGGTCCAAATTCTTGTTCCACAATGCTTCAAGATAAAAGCCAATCAATTGAGTTCTATGATTTTCTTCAAGTAGATTCCAATAAAAGTGAAGTAACTGATAATGCTAGAAGAGATGATGAGGAAGTCAATCAAGATGTTATGGAACTGAAGAACAAGGAAAACAATGTTCAATTCATTGATTTTTTGTCTACCGGAAGTTGCCAACATAGCTGCAAAATTAAGTGA
Protein sequence

>Msa0996060

MCSRGHWRPSEDEKLRELVESYGPHNWNAIAENLRGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLITSHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERYKIYAKGPLDHHTIFSPNDHQTNFERTNLHSFVEKYHEKHNHPRVSHSSFQFPKFHFHGPNSCSTMLQDKSQSIEFYDFLQVDSNKSEVTDNARRDDEEVNQDVMELKNKENNVQFIDFLSTGSCQHSCKIK*