Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001610 | XP_003620948.4 | 91.441 | 479 | 21 | 4 | 9 | 469 | 14 | 490 | 0.0 | 812 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001610 | sp|Q8GWJ4|OSB3_ARATH | 37.947 | 419 | 184 | 9 | 62 | 458 | 71 | 435 | 2.32e-77 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001610 | G7KJW1 | 91.441 | 479 | 21 | 4 | 9 | 469 | 14 | 490 | 0.0 | 812 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0901730 | Msa1001610 | 0.830636 | 2.627124e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001610 | MtrunA17_Chr6g0488631 | 91.441 | 479 | 21 | 4 | 9 | 469 | 14 | 490 | 0.0 | 812 |
| Msa1001610 | MtrunA17_Chr1g0184811 | 52.459 | 61 | 27 | 1 | 401 | 459 | 248 | 308 | 2.13e-13 | 71.2 |
| Msa1001610 | MtrunA17_Chr1g0184811 | 44.118 | 68 | 36 | 1 | 330 | 395 | 248 | 315 | 3.84e-12 | 67.4 |
| Msa1001610 | MtrunA17_Chr1g0184811 | 25.126 | 199 | 143 | 2 | 42 | 234 | 84 | 282 | 5.96e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1001610 | AT5G44785.1 | 37.947 | 419 | 184 | 9 | 62 | 458 | 71 | 435 | 2.36e-78 | 251 |
| Msa1001610 | AT5G44785.2 | 38.095 | 420 | 184 | 9 | 62 | 458 | 71 | 437 | 3.62e-78 | 251 |
| Msa1001610 | AT1G31010.1 | 37.209 | 344 | 142 | 8 | 55 | 379 | 55 | 343 | 3.53e-64 | 212 |
| Msa1001610 | AT1G31010.1 | 50.000 | 134 | 58 | 3 | 328 | 456 | 220 | 349 | 2.30e-29 | 118 |
| Msa1001610 | AT4G20010.1 | 54.745 | 137 | 58 | 1 | 327 | 459 | 232 | 368 | 2.13e-44 | 160 |
| Msa1001610 | AT4G20010.1 | 52.941 | 136 | 64 | 0 | 254 | 389 | 234 | 369 | 7.85e-43 | 155 |
| Msa1001610 | AT4G20010.1 | 29.430 | 316 | 159 | 9 | 48 | 322 | 74 | 366 | 1.68e-26 | 110 |
| Msa1001610 | AT4G20010.2 | 54.745 | 137 | 58 | 1 | 327 | 459 | 232 | 368 | 2.39e-44 | 159 |
| Msa1001610 | AT4G20010.2 | 52.941 | 136 | 64 | 0 | 254 | 389 | 234 | 369 | 8.27e-43 | 155 |
| Msa1001610 | AT4G20010.2 | 29.114 | 316 | 160 | 8 | 48 | 322 | 74 | 366 | 3.03e-26 | 110 |
| Msa1001610 | AT1G47720.1 | 55.932 | 59 | 23 | 2 | 395 | 450 | 179 | 237 | 2.76e-12 | 67.4 |
Find 154 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTCCTCTTGTCTTTCA+TGG | 0.185249 | 6_4:+85461977 | Msa1001610:CDS |
| GGCTTCAACGGTGGCAATTT+TGG | 0.189995 | 6_4:-85467286 | None:intergenic |
| TTTACTGTCCTTTGCTTGTT+TGG | 0.220800 | 6_4:-85466666 | None:intergenic |
| ACCTCAACAATATCAGTTTC+AGG | 0.229878 | 6_4:+85462102 | Msa1001610:CDS |
| CTGTTCATTAAGCTGATATT+TGG | 0.232892 | 6_4:-85467339 | None:intergenic |
| TATATCCGTAATATTCATTT+TGG | 0.238714 | 6_4:-85461639 | None:intergenic |
| CGAAAATCCCACCACTTCTT+TGG | 0.245451 | 6_4:-85465802 | None:intergenic |
| AAGCACAAAGATACTGGTTT+AGG | 0.261216 | 6_4:+85466566 | Msa1001610:CDS |
| GTTGACGGAGTTGGCGAGTT+TGG | 0.264543 | 6_4:-85461849 | None:intergenic |
| TTTGTTTGTTTGGGTTTAAC+AGG | 0.266339 | 6_4:-85466044 | None:intergenic |
| TGCTTGAAATCGGGTCCTTT+TGG | 0.268732 | 6_4:-85467211 | None:intergenic |
| CTTGTTGATTGTTTCAGTTC+AGG | 0.270251 | 6_4:-85465643 | None:intergenic |
| ACTTGCATTTGGGAGGGTTT+TGG | 0.271602 | 6_4:+85461667 | Msa1001610:CDS |
| GAAGGCTGCATTAACTTCTA+AGG | 0.272106 | 6_4:+85462712 | Msa1001610:intron |
| TCTTGTCTTTCATGGTGATT+TGG | 0.281239 | 6_4:+85461985 | Msa1001610:CDS |
| CGCCTATTTGTCAAGTCCTT+GGG | 0.286704 | 6_4:+85465762 | Msa1001610:CDS |
| TTTATTAATGACATCCTTCC+AGG | 0.301493 | 6_4:-85465418 | None:intergenic |
| GTTTCTGCACTTTGTTGTTT+CGG | 0.308351 | 6_4:-85467307 | None:intergenic |
| GCCAACTCCGTCAACCTAAT+TGG | 0.309335 | 6_4:+85461857 | Msa1001610:CDS |
| GTTTGTTAACAGTACCAATT+AGG | 0.314891 | 6_4:-85461871 | None:intergenic |
| GGTGTCTTTGTGCTTGAAAT+CGG | 0.321172 | 6_4:-85467221 | None:intergenic |
| GATATAAAACTACTTGCATT+TGG | 0.334198 | 6_4:+85461656 | Msa1001610:CDS |
| TGCTGCAAAACCCAGCTAAA+TGG | 0.338848 | 6_4:+85466390 | Msa1001610:CDS |
| CCATCCTTGCGCTTGAAGTC+AGG | 0.339558 | 6_4:-85465945 | None:intergenic |
| TGCTGCAAAATCCAGCTAAA+TGG | 0.344950 | 6_4:+85467056 | Msa1001610:CDS |
| GGAGTAAAACTCGCCGTATT+GGG | 0.348045 | 6_4:-85461721 | None:intergenic |
| GGTTGCCGTCGGTGGAAGTT+TGG | 0.353746 | 6_4:-85461904 | None:intergenic |
| TTTGGGTTGGAATGGGATTT+CGG | 0.354684 | 6_4:-85461831 | None:intergenic |
| TTGACGGAGTTGGCGAGTTT+GGG | 0.356940 | 6_4:-85461848 | None:intergenic |
| AGCACAAAGATACTGGTTTA+GGG | 0.362526 | 6_4:+85466567 | Msa1001610:CDS |
| GATTTCAAGCACAAAGATAC+TGG | 0.362858 | 6_4:+85466560 | Msa1001610:CDS |
| AGGAGTAAAACTCGCCGTAT+TGG | 0.378745 | 6_4:-85461722 | None:intergenic |
| TTGGCGAGTTTGGGTTGGAA+TGG | 0.388117 | 6_4:-85461839 | None:intergenic |
| CGCTTGAAGTCAGGGTACTT+TGG | 0.389659 | 6_4:-85465936 | None:intergenic |
| GTGGAAGTTTGGAAGTGAAT+AGG | 0.391890 | 6_4:-85461893 | None:intergenic |
| CCGCCTATTTGTCAAGTCCT+TGG | 0.392562 | 6_4:+85465761 | Msa1001610:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.399109 | 6_4:-85466401 | None:intergenic |
| TGGCGAGTTTGGGTTGGAAT+GGG | 0.399849 | 6_4:-85461838 | None:intergenic |
| AGTCTAGATAAAACCGACTT+TGG | 0.401993 | 6_4:-85465996 | None:intergenic |
| GGTGAAGGGCTATGGCTTAG+AGG | 0.405231 | 6_4:+85467244 | Msa1001610:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.407094 | 6_4:-85467067 | None:intergenic |
| GTGTCTTTGTGCTTGAAATC+GGG | 0.407865 | 6_4:-85467220 | None:intergenic |
| TGTGGCGGCGGTGGAGTAGT+TGG | 0.408360 | 6_4:-85461765 | None:intergenic |
| ATATAAAACTACTTGCATTT+GGG | 0.409113 | 6_4:+85461657 | Msa1001610:CDS |
| GGCTTAGAGGTTCACCAAGT+TGG | 0.411869 | 6_4:+85467257 | Msa1001610:CDS |
| GCTCAGAGATTCACCAAGTT+GGG | 0.411950 | 6_4:+85466595 | Msa1001610:CDS |
| CTTTGTTGTTTCGGCTTCAA+CGG | 0.413639 | 6_4:-85467298 | None:intergenic |
| TGAGCATTATTATACTTATG+AGG | 0.415484 | 6_4:+85467568 | Msa1001610:three_prime_UTR |
| CTGAAGTCGTTTACCAAGTT+CGG | 0.421690 | 6_4:+85467384 | Msa1001610:three_prime_UTR |
| CAAATATCAGCTTAATGAAC+AGG | 0.424404 | 6_4:+85467340 | Msa1001610:exon |
| GCTTAGAGGTTCACCAAGTT+GGG | 0.431791 | 6_4:+85467258 | Msa1001610:CDS |
| GCGAATGGTGGTTGTGGCGG+CGG | 0.434263 | 6_4:-85461777 | None:intergenic |
| GTATCTTTGTGCTTGAAATC+CGG | 0.434859 | 6_4:-85466557 | None:intergenic |
| TGAACTAAGCAGTTCACTAA+AGG | 0.436586 | 6_4:-85467649 | None:intergenic |
| AATGGTGGTTGTGGCGGCGG+TGG | 0.439552 | 6_4:-85461774 | None:intergenic |
| GGCGGTGTATTTCTTTGCAC+TGG | 0.440205 | 6_4:-85465743 | None:intergenic |
| GAACTAAGCAGTTCACTAAA+GGG | 0.441462 | 6_4:-85467648 | None:intergenic |
| GGTTGGAATGGGATTTCGGT+TGG | 0.444856 | 6_4:-85461827 | None:intergenic |
| AGGGACCAAAATGAATATTA+CGG | 0.447882 | 6_4:+85461634 | Msa1001610:exon |
| TTGGTTTAGGTGATGAATCC+TGG | 0.456627 | 6_4:+85467026 | Msa1001610:intron |
| ATGTACAGCCTTCCATTGAC+TGG | 0.456827 | 6_4:-85465442 | None:intergenic |
| GCCCCAAGGACTTGACAAAT+AGG | 0.462544 | 6_4:-85465764 | None:intergenic |
| TTGGTTTAGGTGATGAGTCC+TGG | 0.466548 | 6_4:+85466360 | Msa1001610:intron |
| GGTGGAGTAGTTGGTGGTGG+TGG | 0.467507 | 6_4:-85461756 | None:intergenic |
| ACCAATTAGGTTGACGGAGT+TGG | 0.470487 | 6_4:-85461858 | None:intergenic |
| AATGATGTTGTTCATGTTGA+GGG | 0.471075 | 6_4:+85462037 | Msa1001610:CDS |
| GAAGGCATTAATTAATTACA+TGG | 0.472070 | 6_4:-85467440 | None:intergenic |
| ACTTCTTTGGATCATCTAGA+AGG | 0.476515 | 6_4:-85465789 | None:intergenic |
| CGGAGTTGGCGAGTTTGGGT+TGG | 0.478361 | 6_4:-85461844 | None:intergenic |
| ATACTTATGAGGCTAATCAT+TGG | 0.480718 | 6_4:+85467579 | Msa1001610:three_prime_UTR |
| AACAAAGTGCAGAAACTAGC+TGG | 0.482118 | 6_4:+85467314 | Msa1001610:CDS |
| TTCATCTAGACTGAAAGAAC+TGG | 0.486016 | 6_4:+85466619 | Msa1001610:CDS |
| CATCCTTGCGCTTGAAGTCA+GGG | 0.493504 | 6_4:-85465944 | None:intergenic |
| AGGATGGAAATGTTTCCATC+TGG | 0.494468 | 6_4:+85465961 | Msa1001610:CDS |
| AACATGACACAAGGAAATCC+TGG | 0.500540 | 6_4:+85465400 | Msa1001610:CDS |
| GTAAGAAGATACACCGAACT+TGG | 0.502403 | 6_4:-85467397 | None:intergenic |
| GGCTCAGAGATTCACCAAGT+TGG | 0.503361 | 6_4:+85466594 | Msa1001610:CDS |
| AACAGTACCAATTAGGTTGA+CGG | 0.510399 | 6_4:-85461864 | None:intergenic |
| AAGATACTGGTTTAGGGCTG+TGG | 0.512113 | 6_4:+85466573 | Msa1001610:CDS |
| TACACATCAGAACTTTAAGA+AGG | 0.514718 | 6_4:-85467458 | None:intergenic |
| CCTGACTTCAAGCGCAAGGA+TGG | 0.515099 | 6_4:+85465945 | Msa1001610:CDS |
| GCCACTGTCATCACTCGCCT+TGG | 0.518557 | 6_4:+85461935 | Msa1001610:CDS |
| TCATTAATAAACCCAGTCAA+TGG | 0.522364 | 6_4:+85465430 | Msa1001610:CDS |
| TATTATCCCACCATTTAGCT+GGG | 0.523442 | 6_4:-85466400 | None:intergenic |
| GCGAGTGATGACAGTGGCGG+CGG | 0.524621 | 6_4:-85461930 | None:intergenic |
| AGTAGTTGGTGGTGGTGGAT+CGG | 0.527098 | 6_4:-85461751 | None:intergenic |
| TGGTGGTGGTGGATCGGAGA+CGG | 0.528862 | 6_4:-85461745 | None:intergenic |
| ACCTGAAACTGATATTGTTG+AGG | 0.530813 | 6_4:-85462103 | None:intergenic |
| AAGACACCGGTGAAGGGCTA+TGG | 0.531033 | 6_4:+85467236 | Msa1001610:CDS |
| GGAGGTGAAACAGAGAGAAC+TGG | 0.532010 | 6_4:-85467419 | None:intergenic |
| GTGATGACAGTGGCGGCGGA+AGG | 0.533443 | 6_4:-85461926 | None:intergenic |
| AGTCTAGATGAAACCCAACT+TGG | 0.537097 | 6_4:-85466608 | None:intergenic |
| TAAGGAGAAATCAGATATTG+AGG | 0.539728 | 6_4:+85462730 | Msa1001610:CDS |
| GGCGGTGGAGTAGTTGGTGG+TGG | 0.543559 | 6_4:-85461759 | None:intergenic |
| TGCAAAATCCAGCTAAATGG+TGG | 0.546781 | 6_4:+85467059 | Msa1001610:CDS |
| TGGAGCCTTGTCAAGCCAGA+TGG | 0.551248 | 6_4:-85465976 | None:intergenic |
| TGATGACAGTGGCGGCGGAA+GGG | 0.554487 | 6_4:-85461925 | None:intergenic |
| TGATTTGCGAATGGTGGTTG+TGG | 0.557057 | 6_4:-85461783 | None:intergenic |
| GAGAAATCAGATATTGAGGA+TGG | 0.557205 | 6_4:+85462734 | Msa1001610:CDS |
| TTTATCTAGACTGAAAGCAC+TGG | 0.557738 | 6_4:+85466007 | Msa1001610:CDS |
| TAAAACTACTTGCATTTGGG+AGG | 0.559322 | 6_4:+85461660 | Msa1001610:CDS |
| TGATAGCAAACGCAATGGAT+CGG | 0.561402 | 6_4:+85465825 | Msa1001610:CDS |
| TGTTGTTTCGGCTTCAACGG+TGG | 0.561621 | 6_4:-85467295 | None:intergenic |
| TGTACAGCCTTCCATTGACT+GGG | 0.562189 | 6_4:-85465441 | None:intergenic |
| AAACAAGCAAAGGACAGTAA+AGG | 0.563525 | 6_4:+85466668 | Msa1001610:CDS |
| TGAAATAAAGTCATCAGAGA+AGG | 0.567180 | 6_4:+85465353 | Msa1001610:CDS |
| TCAGAAATATGCAAGAGCTC+CGG | 0.567388 | 6_4:+85466538 | Msa1001610:intron |
| AGAGGAATCAAGAACTGAGA+AGG | 0.569300 | 6_4:-85461965 | None:intergenic |
| CACTTCCAAACTTCCACCGA+CGG | 0.569665 | 6_4:+85461899 | Msa1001610:CDS |
| TCATATCAGAAGAATCCAAA+AGG | 0.570337 | 6_4:+85467196 | Msa1001610:intron |
| AAAACTACTTGCATTTGGGA+GGG | 0.571218 | 6_4:+85461661 | Msa1001610:CDS |
| TGTTTCCATCTGGCTTGACA+AGG | 0.572374 | 6_4:+85465971 | Msa1001610:CDS |
| AAACAAACAAAAGATAGTAA+AGG | 0.572668 | 6_4:+85466056 | Msa1001610:CDS |
| TAATGATGTTGTTCATGTTG+AGG | 0.572908 | 6_4:+85462036 | Msa1001610:CDS |
| GGCGGCGGTGGAGTAGTTGG+TGG | 0.575603 | 6_4:-85461762 | None:intergenic |
| TAATAAACCCAGTCAATGGA+AGG | 0.578339 | 6_4:+85465434 | Msa1001610:CDS |
| TGCAAAACCCAGCTAAATGG+TGG | 0.578339 | 6_4:+85466393 | Msa1001610:CDS |
| GCTTGACAAGGCTCCAAAGT+CGG | 0.581634 | 6_4:+85465983 | Msa1001610:CDS |
| TAGATGATCCAAAGAAGTGG+TGG | 0.582459 | 6_4:+85465794 | Msa1001610:CDS |
| GGCGGCGGAAGGGTTGCCGT+CGG | 0.585509 | 6_4:-85461915 | None:intergenic |
| ATCTAGACTGAAAGAACTGG+AGG | 0.593122 | 6_4:+85466622 | Msa1001610:CDS |
| TGTTAAATCCAAACAAGCAA+AGG | 0.594758 | 6_4:+85466658 | Msa1001610:CDS |
| AAGCACAAAGACACCGGTGA+AGG | 0.595007 | 6_4:+85467229 | Msa1001610:CDS |
| AGCACAAAGACACCGGTGAA+GGG | 0.601351 | 6_4:+85467230 | Msa1001610:CDS |
| TCTAAGCCATAGCCCTTCAC+CGG | 0.602685 | 6_4:-85467242 | None:intergenic |
| TTTCGATGATTTGCGAATGG+TGG | 0.602822 | 6_4:-85461789 | None:intergenic |
| GGATTTCGATGATTTGCGAA+TGG | 0.603384 | 6_4:-85461792 | None:intergenic |
| TTCTAGATGATCCAAAGAAG+TGG | 0.615615 | 6_4:+85465791 | Msa1001610:CDS |
| GTTTGTTTGGGTTTAACAGG+CGG | 0.616497 | 6_4:-85466041 | None:intergenic |
| TTTCGTGATAGCAAACGCAA+TGG | 0.619076 | 6_4:+85465820 | Msa1001610:CDS |
| GCCTATTTGTCAAGTCCTTG+GGG | 0.619487 | 6_4:+85465763 | Msa1001610:CDS |
| TTTGCGAATGGTGGTTGTGG+CGG | 0.623603 | 6_4:-85461780 | None:intergenic |
| AAATCACCATGAAAGACAAG+AGG | 0.625790 | 6_4:-85461983 | None:intergenic |
| GTACCCTGACTTCAAGCGCA+AGG | 0.626123 | 6_4:+85465941 | Msa1001610:CDS |
| GCAAAATCCAGCTAAATGGT+GGG | 0.631610 | 6_4:+85467060 | Msa1001610:CDS |
| GAAGGCTGTACATTCAACAA+AGG | 0.632731 | 6_4:+85465452 | Msa1001610:CDS |
| TGGTGGTGGATCGGAGACGG+AGG | 0.633192 | 6_4:-85461742 | None:intergenic |
| GCAAAACCCAGCTAAATGGT+GGG | 0.633906 | 6_4:+85466394 | Msa1001610:CDS |
| GTGGGATAATAGAGTAGACA+AGG | 0.638003 | 6_4:+85466412 | Msa1001610:CDS |
| AGATGATCCAAAGAAGTGGT+GGG | 0.639731 | 6_4:+85465795 | Msa1001610:CDS |
| TCATCTAGAAGGTCGCCCCA+AGG | 0.647999 | 6_4:-85465778 | None:intergenic |
| TGAGGGTCAACTTTCTACTG+AGG | 0.657254 | 6_4:+85462054 | Msa1001610:CDS |
| GATTTCAAGCACAAAGACAC+CGG | 0.657516 | 6_4:+85467223 | Msa1001610:CDS |
| TGACACAAGGAAATCCTGGA+AGG | 0.668375 | 6_4:+85465404 | Msa1001610:CDS |
| AAACTGAGGAACATGACACA+AGG | 0.672639 | 6_4:+85465391 | Msa1001610:CDS |
| GGCATTAATTAATTACATGG+AGG | 0.675599 | 6_4:-85467437 | None:intergenic |
| TGTGTATAATCATAGCAACT+CGG | 0.677536 | 6_4:+85467475 | Msa1001610:three_prime_UTR |
| ACTGAGAAGGATCATGACCA+AGG | 0.689270 | 6_4:-85461952 | None:intergenic |
| GTGGGATAATAGATTAGACA+AGG | 0.691465 | 6_4:+85467078 | Msa1001610:CDS |
| TATCCATTCCGAGAAAACTG+AGG | 0.698752 | 6_4:+85465377 | Msa1001610:CDS |
| AAGGCGAGTGATGACAGTGG+CGG | 0.703637 | 6_4:-85461933 | None:intergenic |
| CCAAGGACTTGACAAATAGG+CGG | 0.713655 | 6_4:-85465761 | None:intergenic |
| ACCAAGGCGAGTGATGACAG+TGG | 0.758874 | 6_4:-85461936 | None:intergenic |
| AAGTTTAAGATGAAACTGCG+CGG | 0.760301 | 6_4:-85462014 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTATTATTTTTTGAAA+TGG | + | chr6_4:85462810-85462829 | Msa1001610:intron | 10.0% |
| !!! | GATTTATTATTTTTTGAAAT+GGG | + | chr6_4:85462811-85462830 | Msa1001610:intron | 10.0% |
| !! | TATTCTAATAAAATTTCTTT+GGG | - | chr6_4:85464640-85464659 | None:intergenic | 10.0% |
| !!! | ATTTAGTAATATTTTTGTTT+TGG | - | chr6_4:85464870-85464889 | None:intergenic | 10.0% |
| !!! | TTTTTTTTACTTTTATAGTT+TGG | + | chr6_4:85466203-85466222 | Msa1001610:intron | 10.0% |
| !! | TATTAAAGTAAATATATCTT+TGG | - | chr6_4:85466790-85466809 | None:intergenic | 10.0% |
| !!! | ACTTTTGATAATTTGAAAAT+TGG | + | chr6_4:85462331-85462350 | Msa1001610:intron | 15.0% |
| !! | TGGTTTATGATATAATATTA+TGG | + | chr6_4:85462935-85462954 | Msa1001610:intron | 15.0% |
| !!! | CTATCTTTTATTATAGAAAT+AGG | - | chr6_4:85463119-85463138 | None:intergenic | 15.0% |
| !! | AATAAGCTTAAAACAATTTA+TGG | + | chr6_4:85463426-85463445 | Msa1001610:intron | 15.0% |
| !! | AATTTATGAATTCAATGTAT+TGG | - | chr6_4:85464556-85464575 | None:intergenic | 15.0% |
| !! | CTATTCTAATAAAATTTCTT+TGG | - | chr6_4:85464641-85464660 | None:intergenic | 15.0% |
| !!! | AGAAATTTTATTAGAATAGA+AGG | + | chr6_4:85464642-85464661 | Msa1001610:intron | 15.0% |
| !!! | ATGTTTTAATATTTTAGACT+TGG | - | chr6_4:85464947-85464966 | None:intergenic | 15.0% |
| !!! | TCTCTTTGATTATTATATTT+TGG | + | chr6_4:85465875-85465894 | Msa1001610:intron | 15.0% |
| !!! | CTCTTTGATTATTATATTTT+GGG | + | chr6_4:85465876-85465895 | Msa1001610:intron | 15.0% |
| !!! | TCTTTGATTATTATATTTTG+GGG | + | chr6_4:85465877-85465896 | Msa1001610:intron | 15.0% |
| !!! | TATTTCTGATATGATAAAAT+CGG | - | chr6_4:85466527-85466546 | None:intergenic | 15.0% |
| !! | AAATAGAAAAAGAAAAGAAA+TGG | - | chr6_4:85466899-85466918 | None:intergenic | 15.0% |
| !!! | TATATCCGTAATATTCATTT+TGG | - | chr6_4:85461642-85461661 | None:intergenic | 20.0% |
| !! | ATATAAAACTACTTGCATTT+GGG | + | chr6_4:85461657-85461676 | Msa1001610:CDS | 20.0% |
| !!! | GTATCTTTTATCATAGAAAA+AGG | - | chr6_4:85463361-85463380 | None:intergenic | 20.0% |
| !!! | TTATCTTTTATCACAGAAAT+AGG | - | chr6_4:85463668-85463687 | None:intergenic | 20.0% |
| !! | ACATATATCATAAGTTGTTT+CGG | + | chr6_4:85463744-85463763 | Msa1001610:intron | 20.0% |
| !! | GTTACTAGATAAGTTATAAT+AGG | + | chr6_4:85463800-85463819 | Msa1001610:intron | 20.0% |
| !! | TATAATAGGTAAATCTAAAC+AGG | + | chr6_4:85463814-85463833 | Msa1001610:intron | 20.0% |
| !!! | ACATTTTAAAAATGTACTCT+AGG | + | chr6_4:85463908-85463927 | Msa1001610:intron | 20.0% |
| !! | AATTGAGTATTATTGATCAA+GGG | - | chr6_4:85464044-85464063 | None:intergenic | 20.0% |
| !! | AAATTGAGTATTATTGATCA+AGG | - | chr6_4:85464045-85464064 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGAAGTACATATT+TGG | + | chr6_4:85464179-85464198 | Msa1001610:intron | 20.0% |
| !!! | TTTTGTAGAAGTACATATTT+GGG | + | chr6_4:85464180-85464199 | Msa1001610:intron | 20.0% |
| !!! | GATTTGGTTAAAATTAAGTT+TGG | - | chr6_4:85464327-85464346 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTGATATTGATT+TGG | - | chr6_4:85464343-85464362 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCTAAAAGAAAT+TGG | + | chr6_4:85464496-85464515 | Msa1001610:intron | 20.0% |
| !! | TTTAGATGCTAAAAGAAATT+GGG | + | chr6_4:85464497-85464516 | Msa1001610:intron | 20.0% |
| !!! | TCACAAAAATTTACTTTTCA+AGG | + | chr6_4:85464577-85464596 | Msa1001610:intron | 20.0% |
| !!! | AATTTTATTAGAATAGAAGG+AGG | + | chr6_4:85464645-85464664 | Msa1001610:intron | 20.0% |
| !!! | TTCTACTCAATTAATTTTGT+AGG | + | chr6_4:85464784-85464803 | Msa1001610:intron | 20.0% |
| !!! | AGTAATATTTTTGTTTTGGT+AGG | - | chr6_4:85464866-85464885 | None:intergenic | 20.0% |
| !! | AATCTTAAACAAAAAAGACT+CGG | + | chr6_4:85464983-85465002 | Msa1001610:intron | 20.0% |
| !! | GATAACAATGATAATAAAGA+TGG | + | chr6_4:85465219-85465238 | Msa1001610:intron | 20.0% |
| !! | AAAGGATACAAATCAAAAAA+TGG | - | chr6_4:85465492-85465511 | None:intergenic | 20.0% |
| !! | ATTTCAGAAAACAAATATGA+AGG | - | chr6_4:85465553-85465572 | None:intergenic | 20.0% |
| !!! | AATTTTGTGTATCTAAATGT+AGG | + | chr6_4:85465570-85465589 | Msa1001610:intron | 20.0% |
| !!! | CTTTCAAAATCTTCATTTTT+TGG | - | chr6_4:85465601-85465620 | None:intergenic | 20.0% |
| !! | TAAATCAAATGGAATTACTT+TGG | - | chr6_4:85465715-85465734 | None:intergenic | 20.0% |
| !!! | CTTTGATTATTATATTTTGG+GGG | + | chr6_4:85465878-85465897 | Msa1001610:intron | 20.0% |
| !! | TATATTTGTATCTACTTAGT+AGG | + | chr6_4:85465908-85465927 | Msa1001610:intron | 20.0% |
| !!! | TTACTATCTTTTGTTTGTTT+GGG | - | chr6_4:85466056-85466075 | None:intergenic | 20.0% |
| !!! | TTTACTATCTTTTGTTTGTT+TGG | - | chr6_4:85466057-85466076 | None:intergenic | 20.0% |
| !! | AAACAAACAAAAGATAGTAA+AGG | + | chr6_4:85466056-85466075 | Msa1001610:CDS | 20.0% |
| !! | ACATTGATCAAACATAAAAA+TGG | - | chr6_4:85466238-85466257 | None:intergenic | 20.0% |
| !! | AAGCATGAAATAAATTTGTA+GGG | - | chr6_4:85466475-85466494 | None:intergenic | 20.0% |
| !! | TAAGCATGAAATAAATTTGT+AGG | - | chr6_4:85466476-85466495 | None:intergenic | 20.0% |
| !! | AAAAGAAAAGAAATGGAAAA+AGG | - | chr6_4:85466892-85466911 | None:intergenic | 20.0% |
| !! | AATTGAACTTGAACTTAATA+TGG | - | chr6_4:85466997-85467016 | None:intergenic | 20.0% |
| ! | GATATAAAACTACTTGCATT+TGG | + | chr6_4:85461656-85461675 | Msa1001610:CDS | 25.0% |
| ! | TAGAAAAAATGAACCCAATA+CGG | + | chr6_4:85461708-85461727 | Msa1001610:CDS | 25.0% |
| ! | AACAAAGTTGTAACATTGTA+TGG | - | chr6_4:85462147-85462166 | None:intergenic | 25.0% |
| ! | CTTCTAATAAAATTCGTGTT+TGG | - | chr6_4:85462250-85462269 | None:intergenic | 25.0% |
| !!! | ACGAATTTTATTAGAAGTGT+CGG | + | chr6_4:85462253-85462272 | Msa1001610:intron | 25.0% |
| !! | CACTGGTTATAATTTGAAAA+TGG | + | chr6_4:85462466-85462485 | Msa1001610:intron | 25.0% |
| !!! | TGTTGTTTAACATGTTTTTG+TGG | + | chr6_4:85462609-85462628 | Msa1001610:intron | 25.0% |
| !! | CAAAGTCTTAATTTTGTTGA+AGG | + | chr6_4:85462674-85462693 | Msa1001610:intron | 25.0% |
| !! | TTCTTTAACTTTCCAAACAA+AGG | - | chr6_4:85462879-85462898 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | + | chr6_4:85463184-85463203 | Msa1001610:intron | 25.0% |
| ! | ACAATATATGTGCTTATGTA+TGG | + | chr6_4:85463335-85463354 | Msa1001610:intron | 25.0% |
| !! | AACTTAATCGTTTTCCATAT+AGG | + | chr6_4:85463629-85463648 | Msa1001610:intron | 25.0% |
| !! | ATATGTTTTTCGTAAGCTTA+TGG | + | chr6_4:85463698-85463717 | Msa1001610:intron | 25.0% |
| ! | AACTTATGATATATGTCCAT+AGG | - | chr6_4:85463740-85463759 | None:intergenic | 25.0% |
| !!! | TTTTAAAAATGTACTCTAGG+AGG | + | chr6_4:85463911-85463930 | Msa1001610:intron | 25.0% |
| !! | ATGTAAAATTAGAAGCATGA+GGG | + | chr6_4:85463941-85463960 | Msa1001610:intron | 25.0% |
| !! | TCTATTTTCTTGTAACCATT+CGG | + | chr6_4:85463985-85464004 | Msa1001610:intron | 25.0% |
| ! | AACATGCACTATATTTATGT+GGG | - | chr6_4:85464142-85464161 | None:intergenic | 25.0% |
| ! | AAACATGCACTATATTTATG+TGG | - | chr6_4:85464143-85464162 | None:intergenic | 25.0% |
| ! | ACATAAATATAGTGCATGTT+TGG | + | chr6_4:85464142-85464161 | Msa1001610:intron | 25.0% |
| ! | ATGCAATAGATACTAATTTC+AGG | - | chr6_4:85464231-85464250 | None:intergenic | 25.0% |
| ! | GCATTCTTCTCTAATAAATT+GGG | + | chr6_4:85464401-85464420 | Msa1001610:intron | 25.0% |
| ! | TCTAATAAATTGGGACAAAA+GGG | + | chr6_4:85464410-85464429 | Msa1001610:intron | 25.0% |
| ! | TACTGATACTCTATTAAACA+AGG | + | chr6_4:85464679-85464698 | Msa1001610:intron | 25.0% |
| !! | ATTAATTTTGTAGGATCGAA+AGG | + | chr6_4:85464793-85464812 | Msa1001610:intron | 25.0% |
| !! | TTAATTTTGTAGGATCGAAA+GGG | + | chr6_4:85464794-85464813 | Msa1001610:intron | 25.0% |
| ! | TCATTATTGGCAAATGAAAA+AGG | - | chr6_4:85465525-85465544 | None:intergenic | 25.0% |
| ! | TGGCTGTAAAATAAATCAAA+TGG | - | chr6_4:85465726-85465745 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTGTGATATAGT+TGG | + | chr6_4:85466124-85466143 | Msa1001610:intron | 25.0% |
| ! | AAAAAGGATATGAGAATCTT+GGG | - | chr6_4:85466876-85466895 | None:intergenic | 25.0% |
| ! | ATAGAAAAAGACACGAAAAA+AGG | - | chr6_4:85466961-85466980 | None:intergenic | 25.0% |
| !!! | GAAGGCATTAATTAATTACA+TGG | - | chr6_4:85467443-85467462 | None:intergenic | 25.0% |
| ! | TGAGCATTATTATACTTATG+AGG | + | chr6_4:85467568-85467587 | Msa1001610:three_prime_UTR | 25.0% |
| AGGGACCAAAATGAATATTA+CGG | + | chr6_4:85461634-85461653 | Msa1001610:exon | 30.0% | |
| ! | GTTTGTTAACAGTACCAATT+AGG | - | chr6_4:85461874-85461893 | None:intergenic | 30.0% |
| TAATGATGTTGTTCATGTTG+AGG | + | chr6_4:85462036-85462055 | Msa1001610:CDS | 30.0% | |
| AATGATGTTGTTCATGTTGA+GGG | + | chr6_4:85462037-85462056 | Msa1001610:CDS | 30.0% | |
| TGTAACATTGTATGGTATGA+AGG | - | chr6_4:85462139-85462158 | None:intergenic | 30.0% | |
| CACTAGTAATAAATGTGTGT+TGG | + | chr6_4:85462213-85462232 | Msa1001610:intron | 30.0% | |
| ACTTCTAATAAAGCCATGTT+CGG | - | chr6_4:85462388-85462407 | None:intergenic | 30.0% | |
| ! | CAGGACTCTAATTTTATTAG+AGG | + | chr6_4:85462559-85462578 | Msa1001610:intron | 30.0% |
| !! | GGTTTTTAATTGTGTGTTGT+TGG | + | chr6_4:85462630-85462649 | Msa1001610:intron | 30.0% |
| TAAGGAGAAATCAGATATTG+AGG | + | chr6_4:85462730-85462749 | Msa1001610:CDS | 30.0% | |
| !!! | TTTTTGAAATGGGAAAGTTG+AGG | + | chr6_4:85462821-85462840 | Msa1001610:intron | 30.0% |
| AAAGTTGAGGCAATAGAAAT+TGG | + | chr6_4:85462834-85462853 | Msa1001610:intron | 30.0% | |
| TGACATCACATATTGATCTA+AGG | + | chr6_4:85463022-85463041 | Msa1001610:intron | 30.0% | |
| !! | ATTAACTTGTGTATCCAAAC+AGG | - | chr6_4:85463049-85463068 | None:intergenic | 30.0% |
| AAATTGTTTGAGAGAGCTTA+TGG | - | chr6_4:85463238-85463257 | None:intergenic | 30.0% | |
| AATCAGAGTCAGATTCTATT+TGG | - | chr6_4:85463302-85463321 | None:intergenic | 30.0% | |
| CTTATTTCCAAAAATTCTCC+AGG | - | chr6_4:85463412-85463431 | None:intergenic | 30.0% | |
| ! | AAACACTTGTGAAACTGTTT+TGG | - | chr6_4:85463481-85463500 | None:intergenic | 30.0% |
| TGAAATACGTCAATCTAAAC+AGG | + | chr6_4:85463517-85463536 | Msa1001610:intron | 30.0% | |
| ! | GGAAAACGATTAAGTTGTAA+GGG | - | chr6_4:85463625-85463644 | None:intergenic | 30.0% |
| ! | TGGAAAACGATTAAGTTGTA+AGG | - | chr6_4:85463626-85463645 | None:intergenic | 30.0% |
| GCTATACATAAACACCTATA+TGG | - | chr6_4:85463646-85463665 | None:intergenic | 30.0% | |
| AAATAAGCTGAAACAACCTA+TGG | + | chr6_4:85463721-85463740 | Msa1001610:intron | 30.0% | |
| AACCACTTGTGAAACTATTT+GGG | - | chr6_4:85463778-85463797 | None:intergenic | 30.0% | |
| TAACCACTTGTGAAACTATT+TGG | - | chr6_4:85463779-85463798 | None:intergenic | 30.0% | |
| CTTTGAATATGCATAGTGTT+AGG | + | chr6_4:85463872-85463891 | Msa1001610:intron | 30.0% | |
| ! | GCTTCTAATTTTACATGCTT+AGG | - | chr6_4:85463937-85463956 | None:intergenic | 30.0% |
| ! | CATGTAAAATTAGAAGCATG+AGG | + | chr6_4:85463940-85463959 | Msa1001610:intron | 30.0% |
| ! | TGTAAAATTAGAAGCATGAG+GGG | + | chr6_4:85463942-85463961 | Msa1001610:intron | 30.0% |
| GGCATTCTTCTCTAATAAAT+TGG | + | chr6_4:85464400-85464419 | Msa1001610:intron | 30.0% | |
| CTCTAATAAATTGGGACAAA+AGG | + | chr6_4:85464409-85464428 | Msa1001610:intron | 30.0% | |
| ! | GAGTAGAATCCTTCAATTTT+GGG | - | chr6_4:85464772-85464791 | None:intergenic | 30.0% |
| ! | TGAGTAGAATCCTTCAATTT+TGG | - | chr6_4:85464773-85464792 | None:intergenic | 30.0% |
| ! | TAATTTTGTAGGATCGAAAG+GGG | + | chr6_4:85464795-85464814 | Msa1001610:intron | 30.0% |
| ! | TATGTTTAAGCTTTGTGACT+AGG | - | chr6_4:85465033-85465052 | None:intergenic | 30.0% |
| ! | TGGATTTTCATGATTCTGAT+CGG | + | chr6_4:85465190-85465209 | Msa1001610:intron | 30.0% |
| TGAAATAAAGTCATCAGAGA+AGG | + | chr6_4:85465353-85465372 | Msa1001610:CDS | 30.0% | |
| TTTATTAATGACATCCTTCC+AGG | - | chr6_4:85465421-85465440 | None:intergenic | 30.0% | |
| TCATTAATAAACCCAGTCAA+TGG | + | chr6_4:85465430-85465449 | Msa1001610:CDS | 30.0% | |
| TATTGGCAAATGAAAAAGGA+GGG | - | chr6_4:85465521-85465540 | None:intergenic | 30.0% | |
| TTATTGGCAAATGAAAAAGG+AGG | - | chr6_4:85465522-85465541 | None:intergenic | 30.0% | |
| ! | TATGAAGGATGTGTCATTAT+TGG | - | chr6_4:85465538-85465557 | None:intergenic | 30.0% |
| !! | TGAAGATTTTGAAAGCAAGA+CGG | + | chr6_4:85465606-85465625 | Msa1001610:CDS | 30.0% |
| AAGTATATTTGCATTAGCTC+TGG | + | chr6_4:85465667-85465686 | Msa1001610:intron | 30.0% | |
| ! | TTTGTTTGTTTGGGTTTAAC+AGG | - | chr6_4:85466047-85466066 | None:intergenic | 30.0% |
| AAGAGAAAAGAAACGGAAAA+CGG | - | chr6_4:85466303-85466322 | None:intergenic | 30.0% | |
| AGATAGGAAGAGAAAAGAAA+CGG | - | chr6_4:85466310-85466329 | None:intergenic | 30.0% | |
| TATGGTGATAAAACAGAGAT+AGG | - | chr6_4:85466326-85466345 | None:intergenic | 30.0% | |
| ! | TAAGCATCTCAAATTGGTTT+AGG | + | chr6_4:85466347-85466366 | Msa1001610:intron | 30.0% |
| TGTTAAATCCAAACAAGCAA+AGG | + | chr6_4:85466658-85466677 | Msa1001610:CDS | 30.0% | |
| ! | AACTCTATCACAATTTGCTT+AGG | - | chr6_4:85466730-85466749 | None:intergenic | 30.0% |
| TAAGCAAATTGTGATAGAGT+TGG | + | chr6_4:85466729-85466748 | Msa1001610:intron | 30.0% | |
| !! | TATCTTTGGTTTGACTTTGA+TGG | - | chr6_4:85466776-85466795 | None:intergenic | 30.0% |
| GAAAAAGGATATGAGAATCT+TGG | - | chr6_4:85466877-85466896 | None:intergenic | 30.0% | |
| ! | AAGTTCAATTTTTCCCAACT+TGG | + | chr6_4:85467007-85467026 | Msa1001610:intron | 30.0% |
| ! | AATTTTTCCCAACTTGGTTT+AGG | + | chr6_4:85467013-85467032 | Msa1001610:intron | 30.0% |
| TAGCGTGAATTAAACTTGTA+GGG | - | chr6_4:85467138-85467157 | None:intergenic | 30.0% | |
| ATAGCGTGAATTAAACTTGT+AGG | - | chr6_4:85467139-85467158 | None:intergenic | 30.0% | |
| TCATATCAGAAGAATCCAAA+AGG | + | chr6_4:85467196-85467215 | Msa1001610:intron | 30.0% | |
| CTGTTCATTAAGCTGATATT+TGG | - | chr6_4:85467342-85467361 | None:intergenic | 30.0% | |
| CAAATATCAGCTTAATGAAC+AGG | + | chr6_4:85467340-85467359 | Msa1001610:exon | 30.0% | |
| GGCATTAATTAATTACATGG+AGG | - | chr6_4:85467440-85467459 | None:intergenic | 30.0% | |
| ! | TACACATCAGAACTTTAAGA+AGG | - | chr6_4:85467461-85467480 | None:intergenic | 30.0% |
| TGTGTATAATCATAGCAACT+CGG | + | chr6_4:85467475-85467494 | Msa1001610:three_prime_UTR | 30.0% | |
| ATTCAGATAAAAACGTACGT+GGG | - | chr6_4:85467546-85467565 | None:intergenic | 30.0% | |
| AATTCAGATAAAAACGTACG+TGG | - | chr6_4:85467547-85467566 | None:intergenic | 30.0% | |
| ATACTTATGAGGCTAATCAT+TGG | + | chr6_4:85467579-85467598 | Msa1001610:three_prime_UTR | 30.0% | |
| TAAAACTACTTGCATTTGGG+AGG | + | chr6_4:85461660-85461679 | Msa1001610:CDS | 35.0% | |
| AAAACTACTTGCATTTGGGA+GGG | + | chr6_4:85461661-85461680 | Msa1001610:CDS | 35.0% | |
| !!! | GTTTTGGAAACTCATCGAAA+GGG | + | chr6_4:85461683-85461702 | Msa1001610:CDS | 35.0% |
| !!! | TTCGGTTGGTTTTTGGAATT+TGG | - | chr6_4:85461816-85461835 | None:intergenic | 35.0% |
| !! | AACAGTACCAATTAGGTTGA+CGG | - | chr6_4:85461867-85461886 | None:intergenic | 35.0% |
| TTGATTCCTCTTGTCTTTCA+TGG | + | chr6_4:85461977-85461996 | Msa1001610:CDS | 35.0% | |
| AAATCACCATGAAAGACAAG+AGG | - | chr6_4:85461986-85462005 | None:intergenic | 35.0% | |
| TCTTGTCTTTCATGGTGATT+TGG | + | chr6_4:85461985-85462004 | Msa1001610:CDS | 35.0% | |
| ! | AAGTTTAAGATGAAACTGCG+CGG | - | chr6_4:85462017-85462036 | None:intergenic | 35.0% |
| ACCTCAACAATATCAGTTTC+AGG | + | chr6_4:85462102-85462121 | Msa1001610:CDS | 35.0% | |
| ACCTGAAACTGATATTGTTG+AGG | - | chr6_4:85462106-85462125 | None:intergenic | 35.0% | |
| TGTTATGACATGACATGTGT+TGG | + | chr6_4:85462499-85462518 | Msa1001610:intron | 35.0% | |
| GAGAAATCAGATATTGAGGA+TGG | + | chr6_4:85462734-85462753 | Msa1001610:CDS | 35.0% | |
| AACAAAGGCTTAACATCACT+TGG | - | chr6_4:85462864-85462883 | None:intergenic | 35.0% | |
| AGTGATGTTAAGCCTTTGTT+TGG | + | chr6_4:85462864-85462883 | Msa1001610:intron | 35.0% | |
| ATTGTCACTACATAGTGAGT+TGG | + | chr6_4:85462903-85462922 | Msa1001610:intron | 35.0% | |
| ! | TAGTGAGTTGGATCGAAATA+TGG | + | chr6_4:85462915-85462934 | Msa1001610:intron | 35.0% |
| ! | TATTGATCTAAGGTCCTGTT+TGG | + | chr6_4:85463032-85463051 | Msa1001610:intron | 35.0% |
| TTTCATAAGCTATCCTGAAG+AGG | + | chr6_4:85463154-85463173 | Msa1001610:intron | 35.0% | |
| CTTATTTCCATAACCTCTTC+AGG | - | chr6_4:85463170-85463189 | None:intergenic | 35.0% | |
| GAGTCAGATTCTATTTGGAT+TGG | - | chr6_4:85463297-85463316 | None:intergenic | 35.0% | |
| ! | AAGCTATCCTGGAGAATTTT+TGG | + | chr6_4:85463402-85463421 | Msa1001610:intron | 35.0% |
| AGTTGGAAATCATAGAGTCA+GGG | - | chr6_4:85463543-85463562 | None:intergenic | 35.0% | |
| AAGTTGGAAATCATAGAGTC+AGG | - | chr6_4:85463544-85463563 | None:intergenic | 35.0% | |
| ! | CTATGAGGCTTTATAGAAGT+TGG | - | chr6_4:85463560-85463579 | None:intergenic | 35.0% |
| ATGCATAGTGTTAGGAATGT+AGG | + | chr6_4:85463880-85463899 | Msa1001610:intron | 35.0% | |
| CAGTAGAAAGATTGAGAAGA+AGG | - | chr6_4:85464079-85464098 | None:intergenic | 35.0% | |
| ! | ATAGTGCATGTTTGGTTTCA+AGG | + | chr6_4:85464150-85464169 | Msa1001610:intron | 35.0% |
| ! | ACTAATTTCAGGTCAAAACG+AGG | - | chr6_4:85464220-85464239 | None:intergenic | 35.0% |
| GTTCACCACACTTCAATAAT+TGG | + | chr6_4:85464375-85464394 | Msa1001610:intron | 35.0% | |
| ATCGCATGAAAACGTGAAAT+CGG | - | chr6_4:85465095-85465114 | None:intergenic | 35.0% | |
| TGAGTGAAATCGCAAAATTG+TGG | + | chr6_4:85465170-85465189 | Msa1001610:intron | 35.0% | |
| ! | GGATTTTCATGATTCTGATC+GGG | + | chr6_4:85465191-85465210 | Msa1001610:intron | 35.0% |
| !! | GAATTTTGTTTGTGTGATGC+TGG | + | chr6_4:85465261-85465280 | Msa1001610:intron | 35.0% |
| !! | TATGAGCTCTGATAAGCTTT+TGG | + | chr6_4:85465290-85465309 | Msa1001610:intron | 35.0% |
| TAATAAACCCAGTCAATGGA+AGG | + | chr6_4:85465434-85465453 | Msa1001610:CDS | 35.0% | |
| GAAAAAGGAGGGCAAAATAA+AGG | - | chr6_4:85465510-85465529 | None:intergenic | 35.0% | |
| ! | CTTGTTGATTGTTTCAGTTC+AGG | - | chr6_4:85465646-85465665 | None:intergenic | 35.0% |
| ACTTCTTTGGATCATCTAGA+AGG | - | chr6_4:85465792-85465811 | None:intergenic | 35.0% | |
| TTCTAGATGATCCAAAGAAG+TGG | + | chr6_4:85465791-85465810 | Msa1001610:CDS | 35.0% | |
| ! | ATCGGTAATGATTGATGACT+TGG | + | chr6_4:85465843-85465862 | Msa1001610:intron | 35.0% |
| ! | TCGGTAATGATTGATGACTT+GGG | + | chr6_4:85465844-85465863 | Msa1001610:intron | 35.0% |
| ! | AGTCTAGATAAAACCGACTT+TGG | - | chr6_4:85465999-85466018 | None:intergenic | 35.0% |
| ! | TTTATCTAGACTGAAAGCAC+TGG | + | chr6_4:85466007-85466026 | Msa1001610:CDS | 35.0% |
| TGGAACAAAGAAATTCTCAG+AGG | + | chr6_4:85466144-85466163 | Msa1001610:intron | 35.0% | |
| ! | CCAATTTGAGATGCTTAGTA+TGG | - | chr6_4:85466344-85466363 | None:intergenic | 35.0% |
| CCATACTAAGCATCTCAAAT+TGG | + | chr6_4:85466341-85466360 | Msa1001610:intron | 35.0% | |
| TATTATCCCACCATTTAGCT+GGG | - | chr6_4:85466403-85466422 | None:intergenic | 35.0% | |
| TCCATATTCTGCTTTGTCTT+TGG | + | chr6_4:85466439-85466458 | Msa1001610:intron | 35.0% | |
| CCATATTCTGCTTTGTCTTT+GGG | + | chr6_4:85466440-85466459 | Msa1001610:intron | 35.0% | |
| GTATCTTTGTGCTTGAAATC+CGG | - | chr6_4:85466560-85466579 | None:intergenic | 35.0% | |
| GATTTCAAGCACAAAGATAC+TGG | + | chr6_4:85466560-85466579 | Msa1001610:CDS | 35.0% | |
| !! | AAGCACAAAGATACTGGTTT+AGG | + | chr6_4:85466566-85466585 | Msa1001610:CDS | 35.0% |
| !! | AGCACAAAGATACTGGTTTA+GGG | + | chr6_4:85466567-85466586 | Msa1001610:CDS | 35.0% |
| TTTACTGTCCTTTGCTTGTT+TGG | - | chr6_4:85466669-85466688 | None:intergenic | 35.0% | |
| AAACAAGCAAAGGACAGTAA+AGG | + | chr6_4:85466668-85466687 | Msa1001610:CDS | 35.0% | |
| TTCATCACCTAAACCAAGTT+GGG | - | chr6_4:85467023-85467042 | None:intergenic | 35.0% | |
| ATTCATCACCTAAACCAAGT+TGG | - | chr6_4:85467024-85467043 | None:intergenic | 35.0% | |
| ! | ATTTTGCAGCAAATCATTCC+AGG | - | chr6_4:85467047-85467066 | None:intergenic | 35.0% |
| GTGGGATAATAGATTAGACA+AGG | + | chr6_4:85467078-85467097 | Msa1001610:CDS | 35.0% | |
| !! | GTTTCTGCACTTTGTTGTTT+CGG | - | chr6_4:85467310-85467329 | None:intergenic | 35.0% |
| !! | GCTAATCATTGGTCATTTTC+TGG | + | chr6_4:85467590-85467609 | Msa1001610:three_prime_UTR | 35.0% |
| TGTTGAAAAAACAGTCACAG+TGG | - | chr6_4:85467623-85467642 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGAAACTCATCGAA+AGG | + | chr6_4:85461682-85461701 | Msa1001610:CDS | 40.0% |
| ! | TTTCGATGATTTGCGAATGG+TGG | - | chr6_4:85461792-85461811 | None:intergenic | 40.0% |
| ! | GGATTTCGATGATTTGCGAA+TGG | - | chr6_4:85461795-85461814 | None:intergenic | 40.0% |
| !!! | ATGGGATTTCGGTTGGTTTT+TGG | - | chr6_4:85461823-85461842 | None:intergenic | 40.0% |
| !! | TTTGGGTTGGAATGGGATTT+CGG | - | chr6_4:85461834-85461853 | None:intergenic | 40.0% |
| GTGGAAGTTTGGAAGTGAAT+AGG | - | chr6_4:85461896-85461915 | None:intergenic | 40.0% | |
| AGAGGAATCAAGAACTGAGA+AGG | - | chr6_4:85461968-85461987 | None:intergenic | 40.0% | |
| ATATGTCAGTGTGTCAGTCT+CGG | - | chr6_4:85462307-85462326 | None:intergenic | 40.0% | |
| TGTCTAACACTGACATGTGT+CGG | + | chr6_4:85462533-85462552 | Msa1001610:intron | 40.0% | |
| !! | TTGGTGTTGTTGCTAGGTTA+AGG | + | chr6_4:85462649-85462668 | Msa1001610:intron | 40.0% |
| AGGTTATCCTCGTGTTAAGA+AGG | + | chr6_4:85462694-85462713 | Msa1001610:intron | 40.0% | |
| GAAGGCTGCATTAACTTCTA+AGG | + | chr6_4:85462712-85462731 | Msa1001610:intron | 40.0% | |
| !! | AAGTTTTGTCCCACTAAGTG+GGG | - | chr6_4:85462985-85463004 | None:intergenic | 40.0% |
| !! | CAAGTTTTGTCCCACTAAGT+GGG | - | chr6_4:85462986-85463005 | None:intergenic | 40.0% |
| !! | TCAAGTTTTGTCCCACTAAG+TGG | - | chr6_4:85462987-85463006 | None:intergenic | 40.0% |
| AAGCTATCCTGAAGAGGTTA+TGG | + | chr6_4:85463160-85463179 | Msa1001610:intron | 40.0% | |
| AACTGCTTCATAAGCTATCC+TGG | + | chr6_4:85463391-85463410 | Msa1001610:intron | 40.0% | |
| GCCTCATAGAATATGCACTA+AGG | + | chr6_4:85463571-85463590 | Msa1001610:intron | 40.0% | |
| GCCTTAGTGCATATTCTATG+AGG | - | chr6_4:85463575-85463594 | None:intergenic | 40.0% | |
| CTCCCAAATAGTTTCACAAG+TGG | + | chr6_4:85463773-85463792 | Msa1001610:intron | 40.0% | |
| !! | ACCTGCTTTTGCAGTTGTAT+AGG | + | chr6_4:85464012-85464031 | Msa1001610:intron | 40.0% |
| !! | CCTGCTTTTGCAGTTGTATA+GGG | + | chr6_4:85464013-85464032 | Msa1001610:intron | 40.0% |
| !! | CTGCTTTTGCAGTTGTATAG+GGG | + | chr6_4:85464014-85464033 | Msa1001610:intron | 40.0% |
| ! | TGTTCTAGACCCTAACACAT+AGG | + | chr6_4:85464104-85464123 | Msa1001610:intron | 40.0% |
| ! | GTTCTAGACCCTAACACATA+GGG | + | chr6_4:85464105-85464124 | Msa1001610:intron | 40.0% |
| ! | TTTCAGGTCAAAACGAGGTT+TGG | - | chr6_4:85464215-85464234 | None:intergenic | 40.0% |
| ACCACACTTCAATAATTGGC+TGG | + | chr6_4:85464379-85464398 | Msa1001610:intron | 40.0% | |
| GAATAGAAGGAGGTGAAACA+CGG | + | chr6_4:85464655-85464674 | Msa1001610:intron | 40.0% | |
| AAATCTCGCATCAGATCGAA+AGG | + | chr6_4:85464714-85464733 | Msa1001610:intron | 40.0% | |
| AATCTCGCATCAGATCGAAA+GGG | + | chr6_4:85464715-85464734 | Msa1001610:intron | 40.0% | |
| AGATCGCAACCCAAAATTGA+AGG | + | chr6_4:85464760-85464779 | Msa1001610:intron | 40.0% | |
| TAAACATAAACGACTCAGCC+AGG | + | chr6_4:85465045-85465064 | Msa1001610:intron | 40.0% | |
| !! | CCAGGATCTTTAGAATCGTA+CGG | + | chr6_4:85465063-85465082 | Msa1001610:intron | 40.0% |
| TCGCATGAAAACGTGAAATC+GGG | - | chr6_4:85465094-85465113 | None:intergenic | 40.0% | |
| ! | GTTTTCATGCGATTTCACAG+CGG | + | chr6_4:85465102-85465121 | Msa1001610:intron | 40.0% |
| TCAGGATTCTATTCACGATC+CGG | + | chr6_4:85465136-85465155 | Msa1001610:intron | 40.0% | |
| ATTCTATTCACGATCCGGAT+CGG | + | chr6_4:85465141-85465160 | Msa1001610:intron | 40.0% | |
| TATCCATTCCGAGAAAACTG+AGG | + | chr6_4:85465377-85465396 | Msa1001610:CDS | 40.0% | |
| ! | GTCATGTTCCTCAGTTTTCT+CGG | - | chr6_4:85465388-85465407 | None:intergenic | 40.0% |
| AAACTGAGGAACATGACACA+AGG | + | chr6_4:85465391-85465410 | Msa1001610:CDS | 40.0% | |
| AACATGACACAAGGAAATCC+TGG | + | chr6_4:85465400-85465419 | Msa1001610:CDS | 40.0% | |
| GAAGGCTGTACATTCAACAA+AGG | + | chr6_4:85465452-85465471 | Msa1001610:CDS | 40.0% | |
| !! | GATTTTGAAAGCAAGACGGA+AGG | + | chr6_4:85465610-85465629 | Msa1001610:CDS | 40.0% |
| TAGATGATCCAAAGAAGTGG+TGG | + | chr6_4:85465794-85465813 | Msa1001610:CDS | 40.0% | |
| AGATGATCCAAAGAAGTGGT+GGG | + | chr6_4:85465795-85465814 | Msa1001610:CDS | 40.0% | |
| TTTCGTGATAGCAAACGCAA+TGG | + | chr6_4:85465820-85465839 | Msa1001610:CDS | 40.0% | |
| TGATAGCAAACGCAATGGAT+CGG | + | chr6_4:85465825-85465844 | Msa1001610:CDS | 40.0% | |
| AGGATGGAAATGTTTCCATC+TGG | + | chr6_4:85465961-85465980 | Msa1001610:CDS | 40.0% | |
| ! | GTTTGTTTGGGTTTAACAGG+CGG | - | chr6_4:85466044-85466063 | None:intergenic | 40.0% |
| ! | GTTTTGCAGCAAATCATTCC+AGG | - | chr6_4:85466381-85466400 | None:intergenic | 40.0% |
| CTATTATCCCACCATTTAGC+TGG | - | chr6_4:85466404-85466423 | None:intergenic | 40.0% | |
| GTGGGATAATAGAGTAGACA+AGG | + | chr6_4:85466412-85466431 | Msa1001610:CDS | 40.0% | |
| CCCAAAGACAAAGCAGAATA+TGG | - | chr6_4:85466443-85466462 | None:intergenic | 40.0% | |
| TCAGAAATATGCAAGAGCTC+CGG | + | chr6_4:85466538-85466557 | Msa1001610:intron | 40.0% | |
| AGTCTAGATGAAACCCAACT+TGG | - | chr6_4:85466611-85466630 | None:intergenic | 40.0% | |
| TTGGTTTAGGTGATGAATCC+TGG | + | chr6_4:85467026-85467045 | Msa1001610:intron | 40.0% | |
| TGCTGCAAAATCCAGCTAAA+TGG | + | chr6_4:85467056-85467075 | Msa1001610:CDS | 40.0% | |
| TGCAAAATCCAGCTAAATGG+TGG | + | chr6_4:85467059-85467078 | Msa1001610:CDS | 40.0% | |
| GCAAAATCCAGCTAAATGGT+GGG | + | chr6_4:85467060-85467079 | Msa1001610:CDS | 40.0% | |
| CTATTATCCCACCATTTAGC+TGG | - | chr6_4:85466404-85466423 | None:intergenic | 40.0% | |
| ! | ACCACATTTTCTGCTGTCAT+TGG | + | chr6_4:85467103-85467122 | Msa1001610:intron | 40.0% |
| ACCAATGACAGCAGAAAATG+TGG | - | chr6_4:85467107-85467126 | None:intergenic | 40.0% | |
| GTGTCTTTGTGCTTGAAATC+GGG | - | chr6_4:85467223-85467242 | None:intergenic | 40.0% | |
| GGTGTCTTTGTGCTTGAAAT+CGG | - | chr6_4:85467224-85467243 | None:intergenic | 40.0% | |
| GATTTCAAGCACAAAGACAC+CGG | + | chr6_4:85467223-85467242 | Msa1001610:CDS | 40.0% | |
| !! | AATTTTGGCAACACCCAACT+TGG | - | chr6_4:85467274-85467293 | None:intergenic | 40.0% |
| !! | CTTTGTTGTTTCGGCTTCAA+CGG | - | chr6_4:85467301-85467320 | None:intergenic | 40.0% |
| AACAAAGTGCAGAAACTAGC+TGG | + | chr6_4:85467314-85467333 | Msa1001610:CDS | 40.0% | |
| CTGAAGTCGTTTACCAAGTT+CGG | + | chr6_4:85467384-85467403 | Msa1001610:three_prime_UTR | 40.0% | |
| GTAAGAAGATACACCGAACT+TGG | - | chr6_4:85467400-85467419 | None:intergenic | 40.0% | |
| ! | ACTTGCATTTGGGAGGGTTT+TGG | + | chr6_4:85461667-85461686 | Msa1001610:CDS | 45.0% |
| GGAGTAAAACTCGCCGTATT+GGG | - | chr6_4:85461724-85461743 | None:intergenic | 45.0% | |
| AGGAGTAAAACTCGCCGTAT+TGG | - | chr6_4:85461725-85461744 | None:intergenic | 45.0% | |
| ! | TGATTTGCGAATGGTGGTTG+TGG | - | chr6_4:85461786-85461805 | None:intergenic | 45.0% |
| !! | ACCAATTAGGTTGACGGAGT+TGG | - | chr6_4:85461861-85461880 | None:intergenic | 45.0% |
| ACTGAGAAGGATCATGACCA+AGG | - | chr6_4:85461955-85461974 | None:intergenic | 45.0% | |
| TGAGGGTCAACTTTCTACTG+AGG | + | chr6_4:85462054-85462073 | Msa1001610:CDS | 45.0% | |
| TTGTTGTCAGACACCGAACA+TGG | + | chr6_4:85462372-85462391 | Msa1001610:intron | 45.0% | |
| ACATGTCAGTGTGTCTGTGT+CGG | - | chr6_4:85462444-85462463 | None:intergenic | 45.0% | |
| !! | GACATGTGTTGGTGTCATGT+CGG | + | chr6_4:85462510-85462529 | Msa1001610:intron | 45.0% |
| !! | GTGTTGTTGGTGTTGTTGCT+AGG | + | chr6_4:85462643-85462662 | Msa1001610:intron | 45.0% |
| AATGCAGCCTTCTTAACACG+AGG | - | chr6_4:85462704-85462723 | None:intergenic | 45.0% | |
| !! | AGTTTTGTCCCACTAAGTGG+GGG | - | chr6_4:85462984-85463003 | None:intergenic | 45.0% |
| CAAAGTAGCTTCACAGAAGC+TGG | - | chr6_4:85463857-85463876 | None:intergenic | 45.0% | |
| CAAAAGCAGGTACAACCGAA+TGG | - | chr6_4:85464003-85464022 | None:intergenic | 45.0% | |
| CCCTATACAACTGCAAAAGC+AGG | - | chr6_4:85464016-85464035 | None:intergenic | 45.0% | |
| TCTTGCGTCCCTATGTGTTA+GGG | - | chr6_4:85464116-85464135 | None:intergenic | 45.0% | |
| TTCTTGCGTCCCTATGTGTT+AGG | - | chr6_4:85464117-85464136 | None:intergenic | 45.0% | |
| GCCAGCCAATTATTGAAGTG+TGG | - | chr6_4:85464383-85464402 | None:intergenic | 45.0% | |
| !! | AAGGTCCTTAAAAAGTGCCC+TGG | + | chr6_4:85464596-85464615 | Msa1001610:intron | 45.0% |
| !! | AGGTCCTTAAAAAGTGCCCT+GGG | + | chr6_4:85464597-85464616 | Msa1001610:intron | 45.0% |
| ATCTCGCATCAGATCGAAAG+GGG | + | chr6_4:85464716-85464735 | Msa1001610:intron | 45.0% | |
| TTGGTAGGATCGTTCGATCT+TGG | - | chr6_4:85464851-85464870 | None:intergenic | 45.0% | |
| ! | CCGTACGATTCTAAAGATCC+TGG | - | chr6_4:85465066-85465085 | None:intergenic | 45.0% |
| ! | ACAGCGGTTTTACTCAACTC+AGG | + | chr6_4:85465118-85465137 | Msa1001610:intron | 45.0% |
| ! | GTTCCTCAGTTTTCTCGGAA+TGG | - | chr6_4:85465383-85465402 | None:intergenic | 45.0% |
| TGACACAAGGAAATCCTGGA+AGG | + | chr6_4:85465404-85465423 | Msa1001610:CDS | 45.0% | |
| ! | TGTACAGCCTTCCATTGACT+GGG | - | chr6_4:85465444-85465463 | None:intergenic | 45.0% |
| ATGTACAGCCTTCCATTGAC+TGG | - | chr6_4:85465445-85465464 | None:intergenic | 45.0% | |
| !!! | CTCTGGCTCTTTTCGTTGTT+TGG | + | chr6_4:85465684-85465703 | Msa1001610:intron | 45.0% |
| CCAAGGACTTGACAAATAGG+CGG | - | chr6_4:85465764-85465783 | None:intergenic | 45.0% | |
| CGCCTATTTGTCAAGTCCTT+GGG | + | chr6_4:85465762-85465781 | Msa1001610:CDS | 45.0% | |
| GCCTATTTGTCAAGTCCTTG+GGG | + | chr6_4:85465763-85465782 | Msa1001610:CDS | 45.0% | |
| CGAAAATCCCACCACTTCTT+TGG | - | chr6_4:85465805-85465824 | None:intergenic | 45.0% | |
| ! | TGTTTCCATCTGGCTTGACA+AGG | + | chr6_4:85465971-85465990 | Msa1001610:CDS | 45.0% |
| AGAAACGGAAAACGGACATG+AGG | - | chr6_4:85466295-85466314 | None:intergenic | 45.0% | |
| TTGGTTTAGGTGATGAGTCC+TGG | + | chr6_4:85466360-85466379 | Msa1001610:intron | 45.0% | |
| TGCTGCAAAACCCAGCTAAA+TGG | + | chr6_4:85466390-85466409 | Msa1001610:CDS | 45.0% | |
| TGCAAAACCCAGCTAAATGG+TGG | + | chr6_4:85466393-85466412 | Msa1001610:CDS | 45.0% | |
| GCAAAACCCAGCTAAATGGT+GGG | + | chr6_4:85466394-85466413 | Msa1001610:CDS | 45.0% | |
| !! | AAGATACTGGTTTAGGGCTG+TGG | + | chr6_4:85466573-85466592 | Msa1001610:CDS | 45.0% |
| GCTCAGAGATTCACCAAGTT+GGG | + | chr6_4:85466595-85466614 | Msa1001610:CDS | 45.0% | |
| GTTGGTACAGAGATTCTCAG+TGG | + | chr6_4:85466747-85466766 | Msa1001610:intron | 45.0% | |
| ! | TGCTTGAAATCGGGTCCTTT+TGG | - | chr6_4:85467214-85467233 | None:intergenic | 45.0% |
| GCTTAGAGGTTCACCAAGTT+GGG | + | chr6_4:85467258-85467277 | Msa1001610:CDS | 45.0% | |
| !! | AGTAGTTGGTGGTGGTGGAT+CGG | - | chr6_4:85461754-85461773 | None:intergenic | 50.0% |
| TTTGCGAATGGTGGTTGTGG+CGG | - | chr6_4:85461783-85461802 | None:intergenic | 50.0% | |
| GGTTGGAATGGGATTTCGGT+TGG | - | chr6_4:85461830-85461849 | None:intergenic | 50.0% | |
| !! | TGGCGAGTTTGGGTTGGAAT+GGG | - | chr6_4:85461841-85461860 | None:intergenic | 50.0% |
| !! | TTGGCGAGTTTGGGTTGGAA+TGG | - | chr6_4:85461842-85461861 | None:intergenic | 50.0% |
| TTGACGGAGTTGGCGAGTTT+GGG | - | chr6_4:85461851-85461870 | None:intergenic | 50.0% | |
| GCCAACTCCGTCAACCTAAT+TGG | + | chr6_4:85461857-85461876 | Msa1001610:CDS | 50.0% | |
| CACTTCCAAACTTCCACCGA+CGG | + | chr6_4:85461899-85461918 | Msa1001610:CDS | 50.0% | |
| GACACACTGACATGTGACAC+TGG | + | chr6_4:85462449-85462468 | Msa1001610:intron | 50.0% | |
| CACTGACATGTGTCGGATAC+AGG | + | chr6_4:85462540-85462559 | Msa1001610:intron | 50.0% | |
| !! | GGTCCTTAAAAAGTGCCCTG+GGG | + | chr6_4:85464598-85464617 | Msa1001610:intron | 50.0% |
| !! | GTCCTTAAAAAGTGCCCTGG+GGG | + | chr6_4:85464599-85464618 | Msa1001610:intron | 50.0% |
| TATTCACGATCCGGATCGGA+AGG | + | chr6_4:85465145-85465164 | Msa1001610:intron | 50.0% | |
| ATTCACGATCCGGATCGGAA+GGG | + | chr6_4:85465146-85465165 | Msa1001610:intron | 50.0% | |
| GGCGGTGTATTTCTTTGCAC+TGG | - | chr6_4:85465746-85465765 | None:intergenic | 50.0% | |
| CCGCCTATTTGTCAAGTCCT+TGG | + | chr6_4:85465761-85465780 | Msa1001610:CDS | 50.0% | |
| GCCCCAAGGACTTGACAAAT+AGG | - | chr6_4:85465767-85465786 | None:intergenic | 50.0% | |
| ! | CGCTTGAAGTCAGGGTACTT+TGG | - | chr6_4:85465939-85465958 | None:intergenic | 50.0% |
| CATCCTTGCGCTTGAAGTCA+GGG | - | chr6_4:85465947-85465966 | None:intergenic | 50.0% | |
| GCTTGACAAGGCTCCAAAGT+CGG | + | chr6_4:85465983-85466002 | Msa1001610:CDS | 50.0% | |
| GGCTCAGAGATTCACCAAGT+TGG | + | chr6_4:85466594-85466613 | Msa1001610:CDS | 50.0% | |
| AAGCACAAAGACACCGGTGA+AGG | + | chr6_4:85467229-85467248 | Msa1001610:CDS | 50.0% | |
| AGCACAAAGACACCGGTGAA+GGG | + | chr6_4:85467230-85467249 | Msa1001610:CDS | 50.0% | |
| TCTAAGCCATAGCCCTTCAC+CGG | - | chr6_4:85467245-85467264 | None:intergenic | 50.0% | |
| GGCTTAGAGGTTCACCAAGT+TGG | + | chr6_4:85467257-85467276 | Msa1001610:CDS | 50.0% | |
| ! | GGCTTCAACGGTGGCAATTT+TGG | - | chr6_4:85467289-85467308 | None:intergenic | 50.0% |
| !! | TGTTGTTTCGGCTTCAACGG+TGG | - | chr6_4:85467298-85467317 | None:intergenic | 50.0% |
| GGAGGTGAAACAGAGAGAAC+TGG | - | chr6_4:85467422-85467441 | None:intergenic | 50.0% | |
| GTTGACGGAGTTGGCGAGTT+TGG | - | chr6_4:85461852-85461871 | None:intergenic | 55.0% | |
| AAGGCGAGTGATGACAGTGG+CGG | - | chr6_4:85461936-85461955 | None:intergenic | 55.0% | |
| ACCAAGGCGAGTGATGACAG+TGG | - | chr6_4:85461939-85461958 | None:intergenic | 55.0% | |
| TTGTCCCACTAAGTGGGGGT+CGG | - | chr6_4:85462980-85462999 | None:intergenic | 55.0% | |
| !! | TGCCCCCAGGGCACTTTTTA+AGG | - | chr6_4:85464604-85464623 | None:intergenic | 55.0% |
| CGCATCAGATCGAAAGGGGA+TGG | + | chr6_4:85464720-85464739 | Msa1001610:intron | 55.0% | |
| TTCACGATCCGGATCGGAAG+GGG | + | chr6_4:85465147-85465166 | Msa1001610:intron | 55.0% | |
| TTCACTCACCCCTTCCGATC+CGG | - | chr6_4:85465158-85465177 | None:intergenic | 55.0% | |
| TCATCTAGAAGGTCGCCCCA+AGG | - | chr6_4:85465781-85465800 | None:intergenic | 55.0% | |
| GTACCCTGACTTCAAGCGCA+AGG | + | chr6_4:85465941-85465960 | Msa1001610:CDS | 55.0% | |
| CCATCCTTGCGCTTGAAGTC+AGG | - | chr6_4:85465948-85465967 | None:intergenic | 55.0% | |
| CCTGACTTCAAGCGCAAGGA+TGG | + | chr6_4:85465945-85465964 | Msa1001610:CDS | 55.0% | |
| ! | TGGAGCCTTGTCAAGCCAGA+TGG | - | chr6_4:85465979-85465998 | None:intergenic | 55.0% |
| AAGACACCGGTGAAGGGCTA+TGG | + | chr6_4:85467236-85467255 | Msa1001610:CDS | 55.0% | |
| GGTGAAGGGCTATGGCTTAG+AGG | + | chr6_4:85467244-85467263 | Msa1001610:CDS | 55.0% | |
| !! | TGGTGGTGGTGGATCGGAGA+CGG | - | chr6_4:85461748-85461767 | None:intergenic | 60.0% |
| !! | GGTGGAGTAGTTGGTGGTGG+TGG | - | chr6_4:85461759-85461778 | None:intergenic | 60.0% |
| CGGAGTTGGCGAGTTTGGGT+TGG | - | chr6_4:85461847-85461866 | None:intergenic | 60.0% | |
| GGTTGCCGTCGGTGGAAGTT+TGG | - | chr6_4:85461907-85461926 | None:intergenic | 60.0% | |
| TGATGACAGTGGCGGCGGAA+GGG | - | chr6_4:85461928-85461947 | None:intergenic | 60.0% | |
| GCCACTGTCATCACTCGCCT+TGG | + | chr6_4:85461935-85461954 | Msa1001610:CDS | 60.0% | |
| CTAAGTGGGGGTCGGCTACA+TGG | - | chr6_4:85462972-85462991 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCCACTTAG+TGG | + | chr6_4:85462972-85462991 | Msa1001610:intron | 60.0% | |
| GTAGCCGACCCCCACTTAGT+GGG | + | chr6_4:85462973-85462992 | Msa1001610:intron | 60.0% | |
| AATGCTAGCGAGTGCCCCCA+GGG | - | chr6_4:85464616-85464635 | None:intergenic | 60.0% | |
| AAATGCTAGCGAGTGCCCCC+AGG | - | chr6_4:85464617-85464636 | None:intergenic | 60.0% | |
| !! | TGGTGGTGGATCGGAGACGG+AGG | - | chr6_4:85461745-85461764 | None:intergenic | 65.0% |
| !! | GGCGGTGGAGTAGTTGGTGG+TGG | - | chr6_4:85461762-85461781 | None:intergenic | 65.0% |
| TGTGGCGGCGGTGGAGTAGT+TGG | - | chr6_4:85461768-85461787 | None:intergenic | 65.0% | |
| AATGGTGGTTGTGGCGGCGG+TGG | - | chr6_4:85461777-85461796 | None:intergenic | 65.0% | |
| GCGAATGGTGGTTGTGGCGG+CGG | - | chr6_4:85461780-85461799 | None:intergenic | 65.0% | |
| GTGATGACAGTGGCGGCGGA+AGG | - | chr6_4:85461929-85461948 | None:intergenic | 65.0% | |
| GCGAGTGATGACAGTGGCGG+CGG | - | chr6_4:85461933-85461952 | None:intergenic | 65.0% | |
| GGCGGCGGTGGAGTAGTTGG+TGG | - | chr6_4:85461765-85461784 | None:intergenic | 70.0% | |
| GGCGGAAGGGTTGCCGTCGG+TGG | - | chr6_4:85461915-85461934 | None:intergenic | 75.0% | |
| GGCGGCGGAAGGGTTGCCGT+CGG | - | chr6_4:85461918-85461937 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 85461632 | 85467660 | 85461632 | ID=Msa1001610;Name=Msa1001610 |
| chr6_4 | mRNA | 85461632 | 85467660 | 85461632 | ID=Msa1001610-mRNA-1;Parent=Msa1001610;Name=Msa1001610-mRNA-1;_AED=0.14;_eAED=0.14;_QI=12|0.88|0.9|1|1|1|10|306|469 |
| chr6_4 | exon | 85461632 | 85462123 | 85461632 | ID=Msa1001610-mRNA-1:exon:16771;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85462713 | 85462755 | 85462713 | ID=Msa1001610-mRNA-1:exon:16772;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85465340 | 85465473 | 85465340 | ID=Msa1001610-mRNA-1:exon:16773;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85465592 | 85465664 | 85465592 | ID=Msa1001610-mRNA-1:exon:16774;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85465743 | 85465846 | 85465743 | ID=Msa1001610-mRNA-1:exon:16775;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85465930 | 85466077 | 85465930 | ID=Msa1001610-mRNA-1:exon:16776;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85466369 | 85466433 | 85466369 | ID=Msa1001610-mRNA-1:exon:16777;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85466542 | 85466689 | 85466542 | ID=Msa1001610-mRNA-1:exon:16778;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85467035 | 85467099 | 85467035 | ID=Msa1001610-mRNA-1:exon:16779;Parent=Msa1001610-mRNA-1 |
| chr6_4 | exon | 85467205 | 85467660 | 85467205 | ID=Msa1001610-mRNA-1:exon:16780;Parent=Msa1001610-mRNA-1 |
| chr6_4 | five_prime_UTR | 85461632 | 85461643 | 85461632 | ID=Msa1001610-mRNA-1:five_prime_utr;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85461644 | 85462123 | 85461644 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85462713 | 85462755 | 85462713 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85465340 | 85465473 | 85465340 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85465592 | 85465664 | 85465592 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85465743 | 85465846 | 85465743 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85465930 | 85466077 | 85465930 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85466369 | 85466433 | 85466369 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85466542 | 85466689 | 85466542 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85467035 | 85467099 | 85467035 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | CDS | 85467205 | 85467354 | 85467205 | ID=Msa1001610-mRNA-1:cds;Parent=Msa1001610-mRNA-1 |
| chr6_4 | three_prime_UTR | 85467355 | 85467660 | 85467355 | ID=Msa1001610-mRNA-1:three_prime_utr;Parent=Msa1001610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
