Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901730 | XP_003620948.4 | 95.228 | 461 | 20 | 2 | 1 | 461 | 32 | 490 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901730 | sp|Q8GWJ4|OSB3_ARATH | 39.002 | 441 | 165 | 11 | 38 | 450 | 71 | 435 | 1.17e-80 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901730 | G7KJW1 | 95.228 | 461 | 20 | 2 | 1 | 461 | 32 | 490 | 0.0 | 828 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0129930 | Msa0901730 | -0.801956 | 7.048812e-49 | -8.615850e-47 |
| Msa0901730 | Msa0925320 | 0.829824 | 4.147033e-55 | -8.615850e-47 |
| Msa0901730 | Msa1001610 | 0.830636 | 2.627124e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901730 | MtrunA17_Chr6g0488631 | 95.228 | 461 | 20 | 2 | 1 | 461 | 32 | 490 | 0.0 | 828 |
| Msa0901730 | MtrunA17_Chr1g0184811 | 52.459 | 61 | 27 | 1 | 393 | 451 | 248 | 308 | 2.06e-13 | 71.2 |
| Msa0901730 | MtrunA17_Chr1g0184811 | 27.273 | 209 | 142 | 3 | 18 | 226 | 84 | 282 | 7.33e-13 | 69.3 |
| Msa0901730 | MtrunA17_Chr1g0184811 | 44.118 | 68 | 36 | 1 | 322 | 387 | 248 | 315 | 4.03e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901730 | AT5G44785.1 | 39.002 | 441 | 165 | 11 | 38 | 450 | 71 | 435 | 1.18e-81 | 259 |
| Msa0901730 | AT5G44785.2 | 39.140 | 442 | 165 | 11 | 38 | 450 | 71 | 437 | 1.71e-81 | 259 |
| Msa0901730 | AT1G31010.1 | 33.333 | 354 | 158 | 9 | 31 | 371 | 55 | 343 | 3.96e-53 | 182 |
| Msa0901730 | AT1G31010.1 | 50.000 | 134 | 58 | 3 | 320 | 448 | 220 | 349 | 2.52e-29 | 118 |
| Msa0901730 | AT4G20010.1 | 54.745 | 137 | 58 | 1 | 319 | 451 | 232 | 368 | 1.80e-44 | 160 |
| Msa0901730 | AT4G20010.1 | 52.941 | 136 | 64 | 0 | 246 | 381 | 234 | 369 | 6.73e-43 | 155 |
| Msa0901730 | AT4G20010.1 | 30.625 | 320 | 166 | 10 | 24 | 314 | 74 | 366 | 9.13e-30 | 119 |
| Msa0901730 | AT4G20010.2 | 54.745 | 137 | 58 | 1 | 319 | 451 | 232 | 368 | 1.95e-44 | 159 |
| Msa0901730 | AT4G20010.2 | 52.941 | 136 | 64 | 0 | 246 | 381 | 234 | 369 | 6.73e-43 | 155 |
| Msa0901730 | AT4G20010.2 | 30.625 | 320 | 166 | 10 | 24 | 314 | 74 | 366 | 1.47e-29 | 119 |
| Msa0901730 | AT1G47720.1 | 55.932 | 59 | 23 | 2 | 387 | 442 | 179 | 237 | 3.03e-12 | 67.0 |
Find 158 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTCCTCTTGTCTTTCA+TGG | 0.185249 | 6_1:-98592005 | Msa0901730:CDS |
| GGCTTCAACGGTGGCAATTT+TGG | 0.189995 | 6_1:+98586708 | None:intergenic |
| TTTACTGTCCTTTGCTTGTT+TGG | 0.220800 | 6_1:+98587328 | None:intergenic |
| TATATCCGTAATATTCATTT+TGG | 0.229041 | 6_1:+98592348 | None:intergenic |
| ACCTCAACAATATCAGTTTC+AGG | 0.229878 | 6_1:-98591880 | Msa0901730:intron |
| GAAGGCTGCTTTAACTTCTA+AGG | 0.230849 | 6_1:-98591283 | Msa0901730:CDS |
| CCGTTCATTAAGCTGATATT+TGG | 0.240791 | 6_1:+98586655 | None:intergenic |
| CGAAAATCCCACCACTTCTT+TGG | 0.245451 | 6_1:+98588193 | None:intergenic |
| ACTTGCATTTGGGAGGGTTT+TGG | 0.248374 | 6_1:-98592315 | Msa0901730:five_prime_UTR |
| AAGCACAAAGATACTGGTTT+AGG | 0.261216 | 6_1:-98587428 | Msa0901730:CDS |
| GTTGACGGAGTTGGCGAGTT+TGG | 0.264543 | 6_1:+98592133 | None:intergenic |
| TTTGTTTGTTTGGGTTTAAC+AGG | 0.266339 | 6_1:+98587951 | None:intergenic |
| TGCTTGAAATCGGGTCCTTT+TGG | 0.268732 | 6_1:+98586783 | None:intergenic |
| CTTGTTGATTGTTTCAGTTC+AGG | 0.270251 | 6_1:+98588352 | None:intergenic |
| TCTTGTCTTTCATGGTGATT+TGG | 0.281239 | 6_1:-98591997 | Msa0901730:CDS |
| CGCCTATTTGTCAAGTCCTT+GGG | 0.286704 | 6_1:-98588233 | Msa0901730:CDS |
| TTTATTAATGACATCCTTCC+AGG | 0.301493 | 6_1:+98588577 | None:intergenic |
| GTTTCTGCACTTTGTTGTTT+CGG | 0.308351 | 6_1:+98586687 | None:intergenic |
| GCCAACTCCGTCAACCTAAT+TGG | 0.309335 | 6_1:-98592125 | Msa0901730:CDS |
| GTTTGTTAACAGTACCAATT+AGG | 0.314891 | 6_1:+98592111 | None:intergenic |
| GGTGTCTTTGTGCTTGAAAT+CGG | 0.321172 | 6_1:+98586773 | None:intergenic |
| AAAAGTACTCCACTTGCATT+TGG | 0.323444 | 6_1:-98592326 | Msa0901730:five_prime_UTR |
| TGCTGCAAAACCCAGCTAAA+TGG | 0.338848 | 6_1:-98587604 | Msa0901730:CDS |
| CCATCCTTGCGCTTGAAGTC+AGG | 0.339558 | 6_1:+98588050 | None:intergenic |
| TGCTGCAAAATCCAGCTAAA+TGG | 0.344950 | 6_1:-98586938 | Msa0901730:CDS |
| GGAGTAAAACTCGCCGTATT+GGG | 0.348045 | 6_1:+98592261 | None:intergenic |
| GGTTGCCGTCGGTGGAAGTT+TGG | 0.353746 | 6_1:+98592078 | None:intergenic |
| TTTGGGTTGGAATGGGATTT+CGG | 0.354684 | 6_1:+98592151 | None:intergenic |
| TTGACGGAGTTGGCGAGTTT+GGG | 0.356940 | 6_1:+98592134 | None:intergenic |
| AGCACAAAGATACTGGTTTA+GGG | 0.362526 | 6_1:-98587427 | Msa0901730:CDS |
| GATTTCAAGCACAAAGATAC+TGG | 0.362858 | 6_1:-98587434 | Msa0901730:CDS |
| AGGAGTAAAACTCGCCGTAT+TGG | 0.378745 | 6_1:+98592260 | None:intergenic |
| TTGGCGAGTTTGGGTTGGAA+TGG | 0.388117 | 6_1:+98592143 | None:intergenic |
| CGCTTGAAGTCAGGGTACTT+TGG | 0.389659 | 6_1:+98588059 | None:intergenic |
| GTGGAAGTTTGGAAGTGAAT+AGG | 0.391890 | 6_1:+98592089 | None:intergenic |
| CCGCCTATTTGTCAAGTCCT+TGG | 0.392562 | 6_1:-98588234 | Msa0901730:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.399109 | 6_1:+98587593 | None:intergenic |
| TGGCGAGTTTGGGTTGGAAT+GGG | 0.399849 | 6_1:+98592144 | None:intergenic |
| AGTCTAGATAAAACCGACTT+TGG | 0.401993 | 6_1:+98587999 | None:intergenic |
| GGTGAAGGGCTATGGCTTAG+AGG | 0.405231 | 6_1:-98586750 | Msa0901730:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.407094 | 6_1:+98586927 | None:intergenic |
| GTGTCTTTGTGCTTGAAATC+GGG | 0.407865 | 6_1:+98586774 | None:intergenic |
| TGTGGCGGCGGTGGAGTAGT+TGG | 0.408360 | 6_1:+98592217 | None:intergenic |
| GGCTTAGAGGTTCACCAAGT+TGG | 0.411869 | 6_1:-98586737 | Msa0901730:CDS |
| GCTCAGAGATTCACCAAGTT+GGG | 0.411950 | 6_1:-98587399 | Msa0901730:CDS |
| CTTTGTTGTTTCGGCTTCAA+CGG | 0.413639 | 6_1:+98586696 | None:intergenic |
| TGAGCATTATTATACTTATG+AGG | 0.415484 | 6_1:-98586426 | Msa0901730:three_prime_UTR |
| CTGAAGTCGTTTACCAAGTT+CGG | 0.421690 | 6_1:-98586610 | Msa0901730:three_prime_UTR |
| GCTTAGAGGTTCACCAAGTT+GGG | 0.431791 | 6_1:-98586736 | Msa0901730:CDS |
| GCGAATGGTGGTTGTGGCGG+CGG | 0.434263 | 6_1:+98592205 | None:intergenic |
| CAAATATCAGCTTAATGAAC+GGG | 0.434364 | 6_1:-98586654 | Msa0901730:exon |
| GTATCTTTGTGCTTGAAATC+CGG | 0.434859 | 6_1:+98587437 | None:intergenic |
| TGAACTAAGCAGTTCACTAA+AGG | 0.436586 | 6_1:+98586345 | None:intergenic |
| AATGGTGGTTGTGGCGGCGG+TGG | 0.439552 | 6_1:+98592208 | None:intergenic |
| GGCGGTGTATTTCTTTGCAC+TGG | 0.440205 | 6_1:+98588252 | None:intergenic |
| GAACTAAGCAGTTCACTAAA+GGG | 0.441462 | 6_1:+98586346 | None:intergenic |
| GGTTGGAATGGGATTTCGGT+TGG | 0.444856 | 6_1:+98592155 | None:intergenic |
| AATGATGTTGTTCATGTTGA+GGG | 0.447305 | 6_1:-98591945 | Msa0901730:CDS |
| AGGGACCAAAATGAATATTA+CGG | 0.447882 | 6_1:-98592353 | Msa0901730:five_prime_UTR |
| AAAGTACTCCACTTGCATTT+GGG | 0.455107 | 6_1:-98592325 | Msa0901730:five_prime_UTR |
| TTGGTTTAGGTGATGAATCC+TGG | 0.456627 | 6_1:-98586968 | Msa0901730:intron |
| ATGTACAGCCTTCCATTGAC+TGG | 0.456827 | 6_1:+98588553 | None:intergenic |
| GCCCCAAGGACTTGACAAAT+AGG | 0.462544 | 6_1:+98588231 | None:intergenic |
| TTGGTTTAGGTGATGAGTCC+TGG | 0.466548 | 6_1:-98587634 | Msa0901730:intron |
| GGTGGAGTAGTTGGTGGTGG+TGG | 0.467507 | 6_1:+98592226 | None:intergenic |
| ACCAATTAGGTTGACGGAGT+TGG | 0.470487 | 6_1:+98592124 | None:intergenic |
| GAAGGCATTAATTAATTACA+TGG | 0.472070 | 6_1:+98586554 | None:intergenic |
| ATAAGAAGATACACCGAACT+TGG | 0.472362 | 6_1:+98586597 | None:intergenic |
| ACTTCTTTGGATCATCTAGA+AGG | 0.476515 | 6_1:+98588206 | None:intergenic |
| CGGAGTTGGCGAGTTTGGGT+TGG | 0.478361 | 6_1:+98592138 | None:intergenic |
| ATACTTATGAGGCTAATCAT+TGG | 0.480718 | 6_1:-98586415 | Msa0901730:three_prime_UTR |
| AACAAAGTGCAGAAACTAGC+TGG | 0.482118 | 6_1:-98586680 | Msa0901730:CDS |
| TTCATCTAGACTGAAAGAAC+TGG | 0.486016 | 6_1:-98587375 | Msa0901730:CDS |
| CATCCTTGCGCTTGAAGTCA+GGG | 0.493504 | 6_1:+98588051 | None:intergenic |
| AGGATGGAAATGTTTCCATC+TGG | 0.494468 | 6_1:-98588034 | Msa0901730:CDS |
| TTAATTACATGGAGGTGAAA+CGG | 0.500010 | 6_1:+98586565 | None:intergenic |
| AACATGACACAAGGAAATCC+TGG | 0.500540 | 6_1:-98588595 | Msa0901730:CDS |
| GGCTCAGAGATTCACCAAGT+TGG | 0.503361 | 6_1:-98587400 | Msa0901730:CDS |
| AGGTTATCCTCGTGTTAAGA+AGG | 0.503436 | 6_1:-98591301 | Msa0901730:CDS |
| AACAGTACCAATTAGGTTGA+CGG | 0.510399 | 6_1:+98592118 | None:intergenic |
| AAGATACTGGTTTAGGGCTG+TGG | 0.512113 | 6_1:-98587421 | Msa0901730:CDS |
| TACACATCAGAACTTTAAGA+AGG | 0.514718 | 6_1:+98586536 | None:intergenic |
| CCTGACTTCAAGCGCAAGGA+TGG | 0.515099 | 6_1:-98588050 | Msa0901730:CDS |
| GCCACTGTCATCACTCGCCT+TGG | 0.518557 | 6_1:-98592047 | Msa0901730:CDS |
| TCATTAATAAACCCAGTCAA+TGG | 0.522364 | 6_1:-98588565 | Msa0901730:CDS |
| TATTATCCCACCATTTAGCT+GGG | 0.523442 | 6_1:+98587594 | None:intergenic |
| GCGAGTGATGACAGTGGCGG+CGG | 0.524621 | 6_1:+98592052 | None:intergenic |
| AGTAGTTGGTGGTGGTGGAT+CGG | 0.527098 | 6_1:+98592231 | None:intergenic |
| TAAGGATAAATCAGATATTG+AGG | 0.527357 | 6_1:-98591265 | Msa0901730:CDS |
| TGGTGGTGGTGGATCGGAGA+CGG | 0.528862 | 6_1:+98592237 | None:intergenic |
| ACCTGAAACTGATATTGTTG+AGG | 0.530813 | 6_1:+98591879 | None:intergenic |
| AAGACACCGGTGAAGGGCTA+TGG | 0.531033 | 6_1:-98586758 | Msa0901730:CDS |
| GTGATGACAGTGGCGGCGGA+AGG | 0.533443 | 6_1:+98592056 | None:intergenic |
| AGTCTAGATGAAACCCAACT+TGG | 0.537097 | 6_1:+98587386 | None:intergenic |
| GGCGGTGGAGTAGTTGGTGG+TGG | 0.543559 | 6_1:+98592223 | None:intergenic |
| TGCAAAATCCAGCTAAATGG+TGG | 0.546781 | 6_1:-98586935 | Msa0901730:CDS |
| TGGAGCCTTGTCAAGCCAGA+TGG | 0.551248 | 6_1:+98588019 | None:intergenic |
| TGATGACAGTGGCGGCGGAA+GGG | 0.554487 | 6_1:+98592057 | None:intergenic |
| TACTCCACTTGCATTTGGGA+GGG | 0.554700 | 6_1:-98592321 | Msa0901730:five_prime_UTR |
| TGATTTGCGAATGGTGGTTG+TGG | 0.557057 | 6_1:+98592199 | None:intergenic |
| GATAAATCAGATATTGAGGA+TGG | 0.557205 | 6_1:-98591261 | Msa0901730:intron |
| TTTATCTAGACTGAAAGCAC+TGG | 0.557738 | 6_1:-98587988 | Msa0901730:CDS |
| TGATAGCAAACGCAATGGAT+CGG | 0.561402 | 6_1:-98588170 | Msa0901730:intron |
| TGTTGTTTCGGCTTCAACGG+TGG | 0.561621 | 6_1:+98586699 | None:intergenic |
| TGTACAGCCTTCCATTGACT+GGG | 0.562189 | 6_1:+98588554 | None:intergenic |
| AAACAAGCAAAGGACAGTAA+AGG | 0.563525 | 6_1:-98587326 | Msa0901730:intron |
| GTACTCCACTTGCATTTGGG+AGG | 0.567034 | 6_1:-98592322 | Msa0901730:five_prime_UTR |
| TGAAATAAAGTCATCAGAGA+AGG | 0.567180 | 6_1:-98588642 | Msa0901730:CDS |
| TCAGAAATATGCAAGAGCTC+CGG | 0.567388 | 6_1:-98587456 | Msa0901730:intron |
| AGAGGAATCAAGAACTGAGA+AGG | 0.569300 | 6_1:+98592017 | None:intergenic |
| CACTTCCAAACTTCCACCGA+CGG | 0.569665 | 6_1:-98592083 | Msa0901730:CDS |
| TCATATCAGAAGAATCCAAA+AGG | 0.570337 | 6_1:-98586798 | Msa0901730:intron |
| CCAAATATCAGCTTAATGAA+CGG | 0.571151 | 6_1:-98586655 | Msa0901730:exon |
| TGTTTCCATCTGGCTTGACA+AGG | 0.572374 | 6_1:-98588024 | Msa0901730:CDS |
| AAACAAACAAAAGATAGTAA+AGG | 0.572668 | 6_1:-98587939 | Msa0901730:intron |
| TAATGATGTTGTTCATGTTG+AGG | 0.574995 | 6_1:-98591946 | Msa0901730:CDS |
| GGCGGCGGTGGAGTAGTTGG+TGG | 0.575603 | 6_1:+98592220 | None:intergenic |
| TGCAAAACCCAGCTAAATGG+TGG | 0.578339 | 6_1:-98587601 | Msa0901730:CDS |
| TAATAAACCCAGTCAATGGA+AGG | 0.578339 | 6_1:-98588561 | Msa0901730:CDS |
| GCTTGACAAGGCTCCAAAGT+CGG | 0.581634 | 6_1:-98588012 | Msa0901730:CDS |
| TAGATGATCCAAAGAAGTGG+TGG | 0.582459 | 6_1:-98588201 | Msa0901730:CDS |
| GGCGGCGGAAGGGTTGCCGT+CGG | 0.585509 | 6_1:+98592067 | None:intergenic |
| AAAACCCTCCCAAATGCAAG+TGG | 0.591850 | 6_1:+98592317 | None:intergenic |
| ATCTAGACTGAAAGAACTGG+AGG | 0.593122 | 6_1:-98587372 | Msa0901730:CDS |
| TGTTAAATCCAAACAAGCAA+AGG | 0.594758 | 6_1:-98587336 | Msa0901730:CDS |
| AAGCACAAAGACACCGGTGA+AGG | 0.595007 | 6_1:-98586765 | Msa0901730:CDS |
| AGCACAAAGACACCGGTGAA+GGG | 0.601351 | 6_1:-98586764 | Msa0901730:CDS |
| TCTAAGCCATAGCCCTTCAC+CGG | 0.602685 | 6_1:+98586752 | None:intergenic |
| TTTCGATGATTTGCGAATGG+TGG | 0.602822 | 6_1:+98592193 | None:intergenic |
| GGATTTCGATGATTTGCGAA+TGG | 0.603384 | 6_1:+98592190 | None:intergenic |
| TTCTAGATGATCCAAAGAAG+TGG | 0.615615 | 6_1:-98588204 | Msa0901730:CDS |
| GTTTGTTTGGGTTTAACAGG+CGG | 0.616497 | 6_1:+98587954 | None:intergenic |
| TTTCGTGATAGCAAACGCAA+TGG | 0.619076 | 6_1:-98588175 | Msa0901730:CDS |
| GCCTATTTGTCAAGTCCTTG+GGG | 0.619487 | 6_1:-98588232 | Msa0901730:CDS |
| TTTGCGAATGGTGGTTGTGG+CGG | 0.623603 | 6_1:+98592202 | None:intergenic |
| AAATCACCATGAAAGACAAG+AGG | 0.625790 | 6_1:+98591999 | None:intergenic |
| GTACCCTGACTTCAAGCGCA+AGG | 0.626123 | 6_1:-98588054 | Msa0901730:CDS |
| GCAAAATCCAGCTAAATGGT+GGG | 0.631610 | 6_1:-98586934 | Msa0901730:CDS |
| GAAGGCTGTACATTCAACAA+AGG | 0.632731 | 6_1:-98588543 | Msa0901730:intron |
| TGGTGGTGGATCGGAGACGG+AGG | 0.633192 | 6_1:+98592240 | None:intergenic |
| GCAAAACCCAGCTAAATGGT+GGG | 0.633906 | 6_1:-98587600 | Msa0901730:CDS |
| GTGGGATAATAGAGTAGACA+AGG | 0.638003 | 6_1:-98587582 | Msa0901730:intron |
| AGATGATCCAAAGAAGTGGT+GGG | 0.639731 | 6_1:-98588200 | Msa0901730:CDS |
| TCATCTAGAAGGTCGCCCCA+AGG | 0.647999 | 6_1:+98588217 | None:intergenic |
| TGAGGGTCAACTTTCTACTG+AGG | 0.657254 | 6_1:-98591928 | Msa0901730:CDS |
| GATTTCAAGCACAAAGACAC+CGG | 0.657516 | 6_1:-98586771 | Msa0901730:CDS |
| TGACACAAGGAAATCCTGGA+AGG | 0.668375 | 6_1:-98588591 | Msa0901730:CDS |
| AAACTGAGGAACATGACACA+AGG | 0.672639 | 6_1:-98588604 | Msa0901730:CDS |
| GGCATTAATTAATTACATGG+AGG | 0.675599 | 6_1:+98586557 | None:intergenic |
| TGTGTATAATCATAGCAACT+CGG | 0.677536 | 6_1:-98586519 | Msa0901730:three_prime_UTR |
| ACTGAGAAGGATCATGACCA+AGG | 0.689270 | 6_1:+98592030 | None:intergenic |
| GTGGGATAATAGATTAGACA+AGG | 0.691465 | 6_1:-98586916 | Msa0901730:intron |
| AAAGCAGCCTTCTTAACACG+AGG | 0.696273 | 6_1:+98591294 | None:intergenic |
| TATCCATTCCGAGAAAACTG+AGG | 0.698752 | 6_1:-98588618 | Msa0901730:CDS |
| AAGGCGAGTGATGACAGTGG+CGG | 0.703637 | 6_1:+98592049 | None:intergenic |
| CCAAGGACTTGACAAATAGG+CGG | 0.713655 | 6_1:+98588234 | None:intergenic |
| ACCAAGGCGAGTGATGACAG+TGG | 0.758874 | 6_1:+98592046 | None:intergenic |
| AAGCTTAAGATGAAACTGCG+CGG | 0.762356 | 6_1:+98591968 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTATTATTTTTTGAAA+TGG | - | chr6_1:98587526-98587545 | Msa0901730:intron | 10.0% |
| !!! | GATTTATTATTTTTTGAAAT+GGG | - | chr6_1:98587527-98587546 | Msa0901730:intron | 10.0% |
| !! | TATTCTAATAAAATTTCTTT+GGG | + | chr6_1:98589356-98589375 | None:intergenic | 10.0% |
| !!! | ATTTAGTAATATTTTTGTTT+TGG | + | chr6_1:98589586-98589605 | None:intergenic | 10.0% |
| !!! | TTTCTTTGATTATTATATTT+TGG | - | chr6_1:98590591-98590610 | Msa0901730:intron | 10.0% |
| !!! | TTCTTTGATTATTATATTTT+GGG | - | chr6_1:98590592-98590611 | Msa0901730:intron | 10.0% |
| !!! | TTTTTTTTACTTTTATAGTT+TGG | - | chr6_1:98590920-98590939 | Msa0901730:intron | 10.0% |
| !! | TATTAAAGTAAATATATCTT+TGG | + | chr6_1:98591507-98591526 | None:intergenic | 10.0% |
| !!! | CTATCTTTTATTATAGAAAT+AGG | + | chr6_1:98587835-98587854 | None:intergenic | 15.0% |
| !! | AATAAGCTTAAAACAATTTA+TGG | - | chr6_1:98588142-98588161 | Msa0901730:intron | 15.0% |
| !! | AATTTATGAATTCAATGTAT+TGG | + | chr6_1:98589272-98589291 | None:intergenic | 15.0% |
| !!! | TCACAAAAATTTACTTTTTA+AGG | - | chr6_1:98589293-98589312 | Msa0901730:intron | 15.0% |
| !! | CTATTCTAATAAAATTTCTT+TGG | + | chr6_1:98589357-98589376 | None:intergenic | 15.0% |
| !!! | AGAAATTTTATTAGAATAGA+AGG | - | chr6_1:98589358-98589377 | Msa0901730:intron | 15.0% |
| !!! | ATGTTTTAATATTTTAGACT+TGG | + | chr6_1:98589663-98589682 | None:intergenic | 15.0% |
| !!! | TCTTTGATTATTATATTTTG+GGG | - | chr6_1:98590593-98590612 | Msa0901730:intron | 15.0% |
| !!! | TATTTCTGATATGATAAAAT+CGG | + | chr6_1:98591244-98591263 | None:intergenic | 15.0% |
| !! | AAATAGAAAAAGAAAAGAAA+TGG | + | chr6_1:98591616-98591635 | None:intergenic | 15.0% |
| !!! | TATATCCGTAATATTCATTT+TGG | + | chr6_1:98586366-98586385 | None:intergenic | 20.0% |
| !! | ACTTGTGATAATTTGAAAAT+TGG | - | chr6_1:98587065-98587084 | Msa0901730:intron | 20.0% |
| !! | TGGTTTATGATATAATAGTA+TGG | - | chr6_1:98587651-98587670 | Msa0901730:intron | 20.0% |
| !!! | GTATCTTTTATCATAGAAAA+AGG | + | chr6_1:98588077-98588096 | None:intergenic | 20.0% |
| !!! | TTATCTTTTATCACAGAAAT+AGG | + | chr6_1:98588384-98588403 | None:intergenic | 20.0% |
| !! | ACATATATCATAAGTTGTTT+CGG | - | chr6_1:98588460-98588479 | Msa0901730:intron | 20.0% |
| !!! | ACATTTTAAAAATGTACTCT+AGG | - | chr6_1:98588624-98588643 | Msa0901730:CDS | 20.0% |
| !!! | ATGTAAAATTAGAAGTATGA+GGG | - | chr6_1:98588657-98588676 | Msa0901730:CDS | 20.0% |
| !! | AATTGAGTATTATTGATCAA+GGG | + | chr6_1:98588760-98588779 | None:intergenic | 20.0% |
| !! | AAATTGAGTATTATTGATCA+AGG | + | chr6_1:98588761-98588780 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGAAGTACATATT+TGG | - | chr6_1:98588895-98588914 | Msa0901730:intron | 20.0% |
| !!! | TTTTGTAGAAGTACATATTT+GGG | - | chr6_1:98588896-98588915 | Msa0901730:intron | 20.0% |
| !!! | GATTTGGTTAAAATTAAGTT+TGG | + | chr6_1:98589043-98589062 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTGATATTGATT+TGG | + | chr6_1:98589059-98589078 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCTAAAAGAAAT+TGG | - | chr6_1:98589212-98589231 | Msa0901730:intron | 20.0% |
| !! | TTTAGATGCTAAAAGAAATT+GGG | - | chr6_1:98589213-98589232 | Msa0901730:intron | 20.0% |
| !!! | AATTTTATTAGAATAGAAGG+AGG | - | chr6_1:98589361-98589380 | Msa0901730:intron | 20.0% |
| !!! | TTCTACTCAATTAATTTTGT+AGG | - | chr6_1:98589500-98589519 | Msa0901730:intron | 20.0% |
| !!! | AGTAATATTTTTGTTTTGGT+AGG | + | chr6_1:98589582-98589601 | None:intergenic | 20.0% |
| !! | AAAGGATACAAATCAAAAAA+TGG | + | chr6_1:98590208-98590227 | None:intergenic | 20.0% |
| !! | ATTTCAGAAAACAAATATGA+AGG | + | chr6_1:98590269-98590288 | None:intergenic | 20.0% |
| !!! | AATTTTGTGTATCTAAATGT+AGG | - | chr6_1:98590286-98590305 | Msa0901730:intron | 20.0% |
| !!! | CTTTCAAAATCTTCATTTTT+TGG | + | chr6_1:98590317-98590336 | None:intergenic | 20.0% |
| !! | TAAATCAAATGGAATTACTT+TGG | + | chr6_1:98590431-98590450 | None:intergenic | 20.0% |
| !!! | CTTTGATTATTATATTTTGG+GGG | - | chr6_1:98590594-98590613 | Msa0901730:intron | 20.0% |
| !! | TATATTTGTATCTACTTAGT+AGG | - | chr6_1:98590624-98590643 | Msa0901730:intron | 20.0% |
| !!! | TTACTATCTTTTGTTTGTTT+GGG | + | chr6_1:98590772-98590791 | None:intergenic | 20.0% |
| !!! | TTTACTATCTTTTGTTTGTT+TGG | + | chr6_1:98590773-98590792 | None:intergenic | 20.0% |
| !! | AAACAAACAAAAGATAGTAA+AGG | - | chr6_1:98590772-98590791 | Msa0901730:intron | 20.0% |
| !! | ACATTGATCAAACATAAAAA+TGG | + | chr6_1:98590955-98590974 | None:intergenic | 20.0% |
| !! | AAAAGAAAAGAAATGGAAAA+AGG | + | chr6_1:98591609-98591628 | None:intergenic | 20.0% |
| !! | AATTGAACTTGAACTTAATA+TGG | + | chr6_1:98591714-98591733 | None:intergenic | 20.0% |
| ! | TAGAAAAAATGAACCCAATA+CGG | - | chr6_1:98586437-98586456 | Msa0901730:three_prime_UTR | 25.0% |
| ! | AACTAAGTTGTAACATTGTA+TGG | + | chr6_1:98586881-98586900 | None:intergenic | 25.0% |
| ! | CTTCTAATAAAATTCGTGTT+TGG | + | chr6_1:98586984-98587003 | None:intergenic | 25.0% |
| !!! | ACGAATTTTATTAGAAGTGT+CGG | - | chr6_1:98586987-98587006 | Msa0901730:intron | 25.0% |
| !!! | TGTTGTTTAACATGTTTTTG+TGG | - | chr6_1:98587325-98587344 | Msa0901730:intron | 25.0% |
| ! | TAAGGATAAATCAGATATTG+AGG | - | chr6_1:98587446-98587465 | Msa0901730:CDS | 25.0% |
| !! | TTCTTTAACTTTCCAAACAA+AGG | + | chr6_1:98587595-98587614 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr6_1:98587900-98587919 | Msa0901730:intron | 25.0% |
| !! | AACTTAATCGTTTTCCATAT+AGG | - | chr6_1:98588345-98588364 | Msa0901730:intron | 25.0% |
| !! | ATATGTTTTTCGTAAGCTTA+TGG | - | chr6_1:98588414-98588433 | Msa0901730:intron | 25.0% |
| ! | AACTTATGATATATGTCCAT+AGG | + | chr6_1:98588456-98588475 | None:intergenic | 25.0% |
| !! | GTTACTAGATAAGTTCTAAT+AGG | - | chr6_1:98588516-98588535 | Msa0901730:intron | 25.0% |
| ! | TCTAATAGGTAAATCTAAAC+AGG | - | chr6_1:98588530-98588549 | Msa0901730:intron | 25.0% |
| !!! | TTTTAAAAATGTACTCTAGG+AGG | - | chr6_1:98588627-98588646 | Msa0901730:CDS | 25.0% |
| !! | ACTTCTAATTTTACATGCTT+AGG | + | chr6_1:98588653-98588672 | None:intergenic | 25.0% |
| !! | CATGTAAAATTAGAAGTATG+AGG | - | chr6_1:98588656-98588675 | Msa0901730:CDS | 25.0% |
| !! | TGTAAAATTAGAAGTATGAG+GGG | - | chr6_1:98588658-98588677 | Msa0901730:CDS | 25.0% |
| !! | TCTATTTTCTTGTAACCATT+CGG | - | chr6_1:98588701-98588720 | Msa0901730:intron | 25.0% |
| ! | AACATGCACTATATTTATGT+GGG | + | chr6_1:98588858-98588877 | None:intergenic | 25.0% |
| ! | AAACATGCACTATATTTATG+TGG | + | chr6_1:98588859-98588878 | None:intergenic | 25.0% |
| ! | ACATAAATATAGTGCATGTT+TGG | - | chr6_1:98588858-98588877 | Msa0901730:intron | 25.0% |
| ! | ATGCAATAGATACTAATTTC+AGG | + | chr6_1:98588947-98588966 | None:intergenic | 25.0% |
| ! | GCATTCTTCTCTAATAAATT+GGG | - | chr6_1:98589117-98589136 | Msa0901730:intron | 25.0% |
| ! | TCTAATAAATTGGGACAAAT+GGG | - | chr6_1:98589126-98589145 | Msa0901730:intron | 25.0% |
| ! | TACTGATACTCTATTAAACA+AGG | - | chr6_1:98589395-98589414 | Msa0901730:intron | 25.0% |
| !! | ATTAATTTTGTAGGATCGAA+AGG | - | chr6_1:98589509-98589528 | Msa0901730:intron | 25.0% |
| !! | TTAATTTTGTAGGATCGAAA+GGG | - | chr6_1:98589510-98589529 | Msa0901730:intron | 25.0% |
| ! | GACAACAATGATATTAAAGA+TGG | - | chr6_1:98589935-98589954 | Msa0901730:intron | 25.0% |
| ! | TCATTATTGGCAAATGAAAA+AGG | + | chr6_1:98590241-98590260 | None:intergenic | 25.0% |
| ! | TGGCTGTAAAATAAATCAAA+TGG | + | chr6_1:98590442-98590461 | None:intergenic | 25.0% |
| ! | AAGCATGAAATAAACTTGTA+GGG | + | chr6_1:98591192-98591211 | None:intergenic | 25.0% |
| ! | TAAGCATGAAATAAACTTGT+AGG | + | chr6_1:98591193-98591212 | None:intergenic | 25.0% |
| ! | ATAGAAAAAGACACGAAAAA+AGG | + | chr6_1:98591678-98591697 | None:intergenic | 25.0% |
| !!! | GAAGGCATTAATTAATTACA+TGG | + | chr6_1:98592160-98592179 | None:intergenic | 25.0% |
| ! | TGAGCATTATTATACTTATG+AGG | - | chr6_1:98592285-98592304 | Msa0901730:exon | 25.0% |
| AGGGACCAAAATGAATATTA+CGG | - | chr6_1:98586358-98586377 | Msa0901730:three_prime_UTR | 30.0% | |
| ! | GTTTGTTAACAGTACCAATT+AGG | + | chr6_1:98586603-98586622 | None:intergenic | 30.0% |
| TAATGATGTTGTTCATGTTG+AGG | - | chr6_1:98586765-98586784 | Msa0901730:CDS | 30.0% | |
| AATGATGTTGTTCATGTTGA+GGG | - | chr6_1:98586766-98586785 | Msa0901730:CDS | 30.0% | |
| TGTAACATTGTATGGTATGA+AGG | + | chr6_1:98586873-98586892 | None:intergenic | 30.0% | |
| CACTAGTAATAAATGTGTGT+TGG | - | chr6_1:98586947-98586966 | Msa0901730:CDS | 30.0% | |
| ACTTCTAATAAAGCCATGTT+CGG | + | chr6_1:98587122-98587141 | None:intergenic | 30.0% | |
| ! | CTGGACTCTAATTTTATTAG+AGG | - | chr6_1:98587275-98587294 | Msa0901730:intron | 30.0% |
| !! | GGTTTTTAATTGTGTGTTGT+TGG | - | chr6_1:98587346-98587365 | Msa0901730:CDS | 30.0% |
| ! | CAAAGTCTGAATTTTGTTGA+AGG | - | chr6_1:98587390-98587409 | Msa0901730:CDS | 30.0% |
| GATAAATCAGATATTGAGGA+TGG | - | chr6_1:98587450-98587469 | Msa0901730:CDS | 30.0% | |
| !!! | TTTTTGAAATGGGAAAGTTG+AGG | - | chr6_1:98587537-98587556 | Msa0901730:intron | 30.0% |
| AAAGTTGAGGCAATAGAAAT+TGG | - | chr6_1:98587550-98587569 | Msa0901730:intron | 30.0% | |
| TGACATCACATATTGATCTA+AGG | - | chr6_1:98587738-98587757 | Msa0901730:intron | 30.0% | |
| !! | ATTAACTTGTGTATCCAAAC+AGG | + | chr6_1:98587765-98587784 | None:intergenic | 30.0% |
| AAATTGTTTGAGAGAGCTTA+TGG | + | chr6_1:98587954-98587973 | None:intergenic | 30.0% | |
| AATCAGAGTCAGATTCTATT+TGG | + | chr6_1:98588018-98588037 | None:intergenic | 30.0% | |
| CTTATTTCCAAAAATTCTCC+AGG | + | chr6_1:98588128-98588147 | None:intergenic | 30.0% | |
| ! | AAACACTTGTGAAACTGTTT+TGG | + | chr6_1:98588197-98588216 | None:intergenic | 30.0% |
| TGAAATACGTCAATCTAAAC+AGG | - | chr6_1:98588233-98588252 | Msa0901730:CDS | 30.0% | |
| ! | GGAAAACGATTAAGTTGTAA+GGG | + | chr6_1:98588341-98588360 | None:intergenic | 30.0% |
| ! | TGGAAAACGATTAAGTTGTA+AGG | + | chr6_1:98588342-98588361 | None:intergenic | 30.0% |
| GCTATACATAAACACCTATA+TGG | + | chr6_1:98588362-98588381 | None:intergenic | 30.0% | |
| AAATAAGCTGAAACAACCTA+TGG | - | chr6_1:98588437-98588456 | Msa0901730:intron | 30.0% | |
| AACCACTTGTGAAACTATTT+GGG | + | chr6_1:98588494-98588513 | None:intergenic | 30.0% | |
| TAACCACTTGTGAAACTATT+TGG | + | chr6_1:98588495-98588514 | None:intergenic | 30.0% | |
| CTTTGAATATGCATAGTGTT+AGG | - | chr6_1:98588588-98588607 | Msa0901730:CDS | 30.0% | |
| GGCATTCTTCTCTAATAAAT+TGG | - | chr6_1:98589116-98589135 | Msa0901730:intron | 30.0% | |
| CTCTAATAAATTGGGACAAA+TGG | - | chr6_1:98589125-98589144 | Msa0901730:intron | 30.0% | |
| ! | AAAATTTCTTTGGGAAATGC+TGG | + | chr6_1:98589347-98589366 | None:intergenic | 30.0% |
| ! | GAGTAGAATCCTTCAATTTT+GGG | + | chr6_1:98589488-98589507 | None:intergenic | 30.0% |
| ! | TGAGTAGAATCCTTCAATTT+TGG | + | chr6_1:98589489-98589508 | None:intergenic | 30.0% |
| ! | TAATTTTGTAGGATCGAAAG+GGG | - | chr6_1:98589511-98589530 | Msa0901730:intron | 30.0% |
| ! | TATGTTTAAGCTTTGTGACT+AGG | + | chr6_1:98589749-98589768 | None:intergenic | 30.0% |
| ! | TGGATTTTCATGATTCTGAT+CGG | - | chr6_1:98589906-98589925 | Msa0901730:intron | 30.0% |
| TGAAATAAAGTCATCAGAGA+AGG | - | chr6_1:98590069-98590088 | Msa0901730:intron | 30.0% | |
| TTTATTAATGACATCCTTCC+AGG | + | chr6_1:98590137-98590156 | None:intergenic | 30.0% | |
| TCATTAATAAACCCAGTCAA+TGG | - | chr6_1:98590146-98590165 | Msa0901730:intron | 30.0% | |
| TATTGGCAAATGAAAAAGGA+GGG | + | chr6_1:98590237-98590256 | None:intergenic | 30.0% | |
| TTATTGGCAAATGAAAAAGG+AGG | + | chr6_1:98590238-98590257 | None:intergenic | 30.0% | |
| ! | TATGAAGGATGTGTCATTAT+TGG | + | chr6_1:98590254-98590273 | None:intergenic | 30.0% |
| !! | TGAAGATTTTGAAAGCAAGA+CGG | - | chr6_1:98590322-98590341 | Msa0901730:intron | 30.0% |
| AAGTATATTTGCATTAGCTC+TGG | - | chr6_1:98590383-98590402 | Msa0901730:intron | 30.0% | |
| ! | TTTGTTTGTTTGGGTTTAAC+AGG | + | chr6_1:98590763-98590782 | None:intergenic | 30.0% |
| TTTGTTAGCTGTGATATAGT+TGG | - | chr6_1:98590840-98590859 | Msa0901730:intron | 30.0% | |
| AAGAGAAAAGAAACGGAAAA+CGG | + | chr6_1:98591020-98591039 | None:intergenic | 30.0% | |
| AGATAGGAAGAGAAAAGAAA+CGG | + | chr6_1:98591027-98591046 | None:intergenic | 30.0% | |
| TATGGTGATAAAACAGAGAT+AGG | + | chr6_1:98591043-98591062 | None:intergenic | 30.0% | |
| ! | TAAGCATCTCAAATTGGTTT+AGG | - | chr6_1:98591064-98591083 | Msa0901730:intron | 30.0% |
| TGTTAAATCCAAACAAGCAA+AGG | - | chr6_1:98591375-98591394 | Msa0901730:intron | 30.0% | |
| ! | AACTCTATCACAATTTGCTT+AGG | + | chr6_1:98591447-98591466 | None:intergenic | 30.0% |
| TAAGCAAATTGTGATAGAGT+TGG | - | chr6_1:98591446-98591465 | Msa0901730:intron | 30.0% | |
| !! | TATCTTTGGTTTGACTTTGA+TGG | + | chr6_1:98591493-98591512 | None:intergenic | 30.0% |
| AAAAAGGACATGAGAATCTT+GGG | + | chr6_1:98591593-98591612 | None:intergenic | 30.0% | |
| ! | AAGTTCAATTTTTCCCAACT+TGG | - | chr6_1:98591724-98591743 | Msa0901730:intron | 30.0% |
| ! | AATTTTTCCCAACTTGGTTT+AGG | - | chr6_1:98591730-98591749 | Msa0901730:intron | 30.0% |
| TAGCGTGAATTAAACTTGTA+GGG | + | chr6_1:98591855-98591874 | None:intergenic | 30.0% | |
| ATAGCGTGAATTAAACTTGT+AGG | + | chr6_1:98591856-98591875 | None:intergenic | 30.0% | |
| TCATATCAGAAGAATCCAAA+AGG | - | chr6_1:98591913-98591932 | Msa0901730:CDS | 30.0% | |
| CCAAATATCAGCTTAATGAA+CGG | - | chr6_1:98592056-98592075 | Msa0901730:CDS | 30.0% | |
| CAAATATCAGCTTAATGAAC+GGG | - | chr6_1:98592057-98592076 | Msa0901730:CDS | 30.0% | |
| TTAATTACATGGAGGTGAAA+CGG | + | chr6_1:98592149-98592168 | None:intergenic | 30.0% | |
| GGCATTAATTAATTACATGG+AGG | + | chr6_1:98592157-98592176 | None:intergenic | 30.0% | |
| ! | TACACATCAGAACTTTAAGA+AGG | + | chr6_1:98592178-98592197 | None:intergenic | 30.0% |
| TGTGTATAATCATAGCAACT+CGG | - | chr6_1:98592192-98592211 | Msa0901730:CDS | 30.0% | |
| ATTCAGATAAAAACGTACGT+GGG | + | chr6_1:98592263-98592282 | None:intergenic | 30.0% | |
| AATTCAGATAAAAACGTACG+TGG | + | chr6_1:98592264-98592283 | None:intergenic | 30.0% | |
| ATACTTATGAGGCTAATCAT+TGG | - | chr6_1:98592296-98592315 | Msa0901730:five_prime_UTR | 30.0% | |
| !! | AAAAGTACTCCACTTGCATT+TGG | - | chr6_1:98586385-98586404 | Msa0901730:three_prime_UTR | 35.0% |
| ! | AAAGTACTCCACTTGCATTT+GGG | - | chr6_1:98586386-98586405 | Msa0901730:three_prime_UTR | 35.0% |
| !!! | GTTTTGGAAACTCATCGAAA+GGG | - | chr6_1:98586412-98586431 | Msa0901730:three_prime_UTR | 35.0% |
| !!! | TTCGGTTGGTTTTTGGAATT+TGG | + | chr6_1:98586545-98586564 | None:intergenic | 35.0% |
| !! | AACAGTACCAATTAGGTTGA+CGG | + | chr6_1:98586596-98586615 | None:intergenic | 35.0% |
| TTGATTCCTCTTGTCTTTCA+TGG | - | chr6_1:98586706-98586725 | Msa0901730:CDS | 35.0% | |
| AAATCACCATGAAAGACAAG+AGG | + | chr6_1:98586715-98586734 | None:intergenic | 35.0% | |
| TCTTGTCTTTCATGGTGATT+TGG | - | chr6_1:98586714-98586733 | Msa0901730:CDS | 35.0% | |
| ACCTCAACAATATCAGTTTC+AGG | - | chr6_1:98586831-98586850 | Msa0901730:intron | 35.0% | |
| ACCTGAAACTGATATTGTTG+AGG | + | chr6_1:98586835-98586854 | None:intergenic | 35.0% | |
| GAAAATGACATGACATGTGT+TGG | - | chr6_1:98587215-98587234 | Msa0901730:intron | 35.0% | |
| AACAAAGGCTTAACATCACT+TGG | + | chr6_1:98587580-98587599 | None:intergenic | 35.0% | |
| AGTGATGTTAAGCCTTTGTT+TGG | - | chr6_1:98587580-98587599 | Msa0901730:intron | 35.0% | |
| ATTGTCACTACATAGTGAGT+TGG | - | chr6_1:98587619-98587638 | Msa0901730:CDS | 35.0% | |
| ! | TAGTGAGTTGGATCGAAATA+TGG | - | chr6_1:98587631-98587650 | Msa0901730:intron | 35.0% |
| !! | AAGTTTTATCCCACTAAGTG+GGG | + | chr6_1:98587701-98587720 | None:intergenic | 35.0% |
| !! | CAAGTTTTATCCCACTAAGT+GGG | + | chr6_1:98587702-98587721 | None:intergenic | 35.0% |
| !! | TCAAGTTTTATCCCACTAAG+TGG | + | chr6_1:98587703-98587722 | None:intergenic | 35.0% |
| ! | TATTGATCTAAGGTCCTGTT+TGG | - | chr6_1:98587748-98587767 | Msa0901730:intron | 35.0% |
| TTTCATAAGCTATCCTGAAG+AGG | - | chr6_1:98587870-98587889 | Msa0901730:intron | 35.0% | |
| CTTATTTCCATAACCTCTTC+AGG | + | chr6_1:98587886-98587905 | None:intergenic | 35.0% | |
| GAGTCAGATTCTATTTGGAT+TGG | + | chr6_1:98588013-98588032 | None:intergenic | 35.0% | |
| ! | AAGCTATCCTGGAGAATTTT+TGG | - | chr6_1:98588118-98588137 | Msa0901730:intron | 35.0% |
| AGTTGGAAATCATAGAGTCA+GGG | + | chr6_1:98588259-98588278 | None:intergenic | 35.0% | |
| AAGTTGGAAATCATAGAGTC+AGG | + | chr6_1:98588260-98588279 | None:intergenic | 35.0% | |
| ! | CTATGAGGCTTTATAGAAGT+TGG | + | chr6_1:98588276-98588295 | None:intergenic | 35.0% |
| ATGCATAGTGTTAGGAATGT+AGG | - | chr6_1:98588596-98588615 | Msa0901730:CDS | 35.0% | |
| CAGTAGAAAGATTGAGAAGA+AGG | + | chr6_1:98588795-98588814 | None:intergenic | 35.0% | |
| ! | ATAGTGCATGTTTGGTTTCA+AGG | - | chr6_1:98588866-98588885 | Msa0901730:intron | 35.0% |
| ! | ACTAATTTCAGGTCAAAACG+AGG | + | chr6_1:98588936-98588955 | None:intergenic | 35.0% |
| ACCACACTTCAATAATTGAC+TGG | - | chr6_1:98589095-98589114 | Msa0901730:intron | 35.0% | |
| ATCGCATGAAAACGTGAAAT+CGG | + | chr6_1:98589811-98589830 | None:intergenic | 35.0% | |
| TGAGTGAAATCGCAAAATTG+TGG | - | chr6_1:98589886-98589905 | Msa0901730:intron | 35.0% | |
| ! | GGATTTTCATGATTCTGATC+GGG | - | chr6_1:98589907-98589926 | Msa0901730:intron | 35.0% |
| !! | GAATTTTGTTTGTGTGATGC+TGG | - | chr6_1:98589977-98589996 | Msa0901730:intron | 35.0% |
| !! | TATGAGCTCTGATAAGCTTT+TGG | - | chr6_1:98590006-98590025 | Msa0901730:intron | 35.0% |
| TAATAAACCCAGTCAATGGA+AGG | - | chr6_1:98590150-98590169 | Msa0901730:intron | 35.0% | |
| GAAAAAGGAGGGCAAAATAA+AGG | + | chr6_1:98590226-98590245 | None:intergenic | 35.0% | |
| ! | CTTGTTGATTGTTTCAGTTC+AGG | + | chr6_1:98590362-98590381 | None:intergenic | 35.0% |
| ACTTCTTTGGATCATCTAGA+AGG | + | chr6_1:98590508-98590527 | None:intergenic | 35.0% | |
| TTCTAGATGATCCAAAGAAG+TGG | - | chr6_1:98590507-98590526 | Msa0901730:intron | 35.0% | |
| ! | ATCGGTAATGATTGATGACT+TGG | - | chr6_1:98590559-98590578 | Msa0901730:intron | 35.0% |
| ! | TCGGTAATGATTGATGACTT+GGG | - | chr6_1:98590560-98590579 | Msa0901730:intron | 35.0% |
| ! | AGTCTAGATAAAACCGACTT+TGG | + | chr6_1:98590715-98590734 | None:intergenic | 35.0% |
| ! | TTTATCTAGACTGAAAGCAC+TGG | - | chr6_1:98590723-98590742 | Msa0901730:intron | 35.0% |
| TGGAACAAAGAAATTCTCAG+AGG | - | chr6_1:98590860-98590879 | Msa0901730:intron | 35.0% | |
| ! | CCAATTTGAGATGCTTAGTA+TGG | + | chr6_1:98591061-98591080 | None:intergenic | 35.0% |
| CCATACTAAGCATCTCAAAT+TGG | - | chr6_1:98591058-98591077 | Msa0901730:intron | 35.0% | |
| TATTATCCCACCATTTAGCT+GGG | + | chr6_1:98591120-98591139 | None:intergenic | 35.0% | |
| TCCATATTCTGCTTTGTCTT+TGG | - | chr6_1:98591156-98591175 | Msa0901730:intron | 35.0% | |
| CCATATTCTGCTTTGTCTTT+GGG | - | chr6_1:98591157-98591176 | Msa0901730:intron | 35.0% | |
| GTATCTTTGTGCTTGAAATC+CGG | + | chr6_1:98591277-98591296 | None:intergenic | 35.0% | |
| GATTTCAAGCACAAAGATAC+TGG | - | chr6_1:98591277-98591296 | Msa0901730:CDS | 35.0% | |
| !! | AAGCACAAAGATACTGGTTT+AGG | - | chr6_1:98591283-98591302 | Msa0901730:CDS | 35.0% |
| !! | AGCACAAAGATACTGGTTTA+GGG | - | chr6_1:98591284-98591303 | Msa0901730:CDS | 35.0% |
| TTTACTGTCCTTTGCTTGTT+TGG | + | chr6_1:98591386-98591405 | None:intergenic | 35.0% | |
| AAACAAGCAAAGGACAGTAA+AGG | - | chr6_1:98591385-98591404 | Msa0901730:intron | 35.0% | |
| GAAAAAGGACATGAGAATCT+TGG | + | chr6_1:98591594-98591613 | None:intergenic | 35.0% | |
| TTCATCACCTAAACCAAGTT+GGG | + | chr6_1:98591740-98591759 | None:intergenic | 35.0% | |
| ATTCATCACCTAAACCAAGT+TGG | + | chr6_1:98591741-98591760 | None:intergenic | 35.0% | |
| ! | ATTTTGCAGCAAATCATTCC+AGG | + | chr6_1:98591764-98591783 | None:intergenic | 35.0% |
| GTGGGATAATAGATTAGACA+AGG | - | chr6_1:98591795-98591814 | Msa0901730:intron | 35.0% | |
| !! | GTTTCTGCACTTTGTTGTTT+CGG | + | chr6_1:98592027-98592046 | None:intergenic | 35.0% |
| CCGTTCATTAAGCTGATATT+TGG | + | chr6_1:98592059-98592078 | None:intergenic | 35.0% | |
| ATAAGAAGATACACCGAACT+TGG | + | chr6_1:98592117-98592136 | None:intergenic | 35.0% | |
| !! | GCTAATCATTGGTCATTTTC+TGG | - | chr6_1:98592307-98592326 | Msa0901730:five_prime_UTR | 35.0% |
| TGTTGAAAAAACAGTCACAG+TGG | + | chr6_1:98592340-98592359 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGAAACTCATCGAA+AGG | - | chr6_1:98586411-98586430 | Msa0901730:three_prime_UTR | 40.0% |
| ! | TTTCGATGATTTGCGAATGG+TGG | + | chr6_1:98586521-98586540 | None:intergenic | 40.0% |
| ! | GGATTTCGATGATTTGCGAA+TGG | + | chr6_1:98586524-98586543 | None:intergenic | 40.0% |
| !!! | ATGGGATTTCGGTTGGTTTT+TGG | + | chr6_1:98586552-98586571 | None:intergenic | 40.0% |
| !! | TTTGGGTTGGAATGGGATTT+CGG | + | chr6_1:98586563-98586582 | None:intergenic | 40.0% |
| GTGGAAGTTTGGAAGTGAAT+AGG | + | chr6_1:98586625-98586644 | None:intergenic | 40.0% | |
| AGAGGAATCAAGAACTGAGA+AGG | + | chr6_1:98586697-98586716 | None:intergenic | 40.0% | |
| AAGCTTAAGATGAAACTGCG+CGG | + | chr6_1:98586746-98586765 | None:intergenic | 40.0% | |
| ATATGTCAGTGTGTCAGTCT+CGG | + | chr6_1:98587041-98587060 | None:intergenic | 40.0% | |
| TGTCTAACACTGACATGTGT+CGG | - | chr6_1:98587249-98587268 | Msa0901730:intron | 40.0% | |
| !! | TTGGTGTTGTTGCTAGGTTA+AGG | - | chr6_1:98587365-98587384 | Msa0901730:CDS | 40.0% |
| AGGTTATCCTCGTGTTAAGA+AGG | - | chr6_1:98587410-98587429 | Msa0901730:CDS | 40.0% | |
| ! | GAAGGCTGCTTTAACTTCTA+AGG | - | chr6_1:98587428-98587447 | Msa0901730:CDS | 40.0% |
| !! | AGTTTTATCCCACTAAGTGG+GGG | + | chr6_1:98587700-98587719 | None:intergenic | 40.0% |
| AAGCTATCCTGAAGAGGTTA+TGG | - | chr6_1:98587876-98587895 | Msa0901730:intron | 40.0% | |
| AACTGCTTCATAAGCTATCC+TGG | - | chr6_1:98588107-98588126 | Msa0901730:intron | 40.0% | |
| GCCTCATAGAATATGCACTA+AGG | - | chr6_1:98588287-98588306 | Msa0901730:intron | 40.0% | |
| GCCTTAGTGCATATTCTATG+AGG | + | chr6_1:98588291-98588310 | None:intergenic | 40.0% | |
| CTCCCAAATAGTTTCACAAG+TGG | - | chr6_1:98588489-98588508 | Msa0901730:intron | 40.0% | |
| ! | CAAAGTAGCTTTACAGAAGC+TGG | + | chr6_1:98588573-98588592 | None:intergenic | 40.0% |
| !! | ACCTGCTTTTGCAGTTGTAT+AGG | - | chr6_1:98588728-98588747 | Msa0901730:intron | 40.0% |
| !! | CCTGCTTTTGCAGTTGTATA+GGG | - | chr6_1:98588729-98588748 | Msa0901730:intron | 40.0% |
| !! | CTGCTTTTGCAGTTGTATAG+GGG | - | chr6_1:98588730-98588749 | Msa0901730:intron | 40.0% |
| ! | TGTTCTAGACCCTAACACAT+AGG | - | chr6_1:98588820-98588839 | Msa0901730:intron | 40.0% |
| ! | GTTCTAGACCCTAACACATA+GGG | - | chr6_1:98588821-98588840 | Msa0901730:intron | 40.0% |
| ! | TTTCAGGTCAAAACGAGGTT+TGG | + | chr6_1:98588931-98588950 | None:intergenic | 40.0% |
| GCCAGTCAATTATTGAAGTG+TGG | + | chr6_1:98589099-98589118 | None:intergenic | 40.0% | |
| GAATAGAAGGAGGTGAAACA+CGG | - | chr6_1:98589371-98589390 | Msa0901730:intron | 40.0% | |
| AAATCTCGCATCAGATCGAA+AGG | - | chr6_1:98589430-98589449 | Msa0901730:intron | 40.0% | |
| AATCTCGCATCAGATCGAAA+GGG | - | chr6_1:98589431-98589450 | Msa0901730:intron | 40.0% | |
| AGATCGCAACCCAAAATTGA+AGG | - | chr6_1:98589476-98589495 | Msa0901730:intron | 40.0% | |
| TAAACATAAACGACTCAGCC+AGG | - | chr6_1:98589761-98589780 | Msa0901730:intron | 40.0% | |
| !! | CCAGGATCTTTAGAATCGTA+CGG | - | chr6_1:98589779-98589798 | Msa0901730:intron | 40.0% |
| TCGCATGAAAACGTGAAATC+GGG | + | chr6_1:98589810-98589829 | None:intergenic | 40.0% | |
| ! | GTTTTCATGCGATTTCACAG+TGG | - | chr6_1:98589818-98589837 | Msa0901730:intron | 40.0% |
| !! | ACAGTGGTTTTACTCAACTC+AGG | - | chr6_1:98589834-98589853 | Msa0901730:intron | 40.0% |
| TCAGGATTCTATTCACGATC+CGG | - | chr6_1:98589852-98589871 | Msa0901730:intron | 40.0% | |
| ATTCTATTCACGATCCGGAT+CGG | - | chr6_1:98589857-98589876 | Msa0901730:intron | 40.0% | |
| TATCCATTCCGAGAAAACTG+AGG | - | chr6_1:98590093-98590112 | Msa0901730:intron | 40.0% | |
| ! | GTCATGTTCCTCAGTTTTCT+CGG | + | chr6_1:98590104-98590123 | None:intergenic | 40.0% |
| AAACTGAGGAACATGACACA+AGG | - | chr6_1:98590107-98590126 | Msa0901730:intron | 40.0% | |
| AACATGACACAAGGAAATCC+TGG | - | chr6_1:98590116-98590135 | Msa0901730:intron | 40.0% | |
| GAAGGCTGTACATTCAACAA+AGG | - | chr6_1:98590168-98590187 | Msa0901730:intron | 40.0% | |
| !! | GATTTTGAAAGCAAGACGGA+AGG | - | chr6_1:98590326-98590345 | Msa0901730:intron | 40.0% |
| TAGATGATCCAAAGAAGTGG+TGG | - | chr6_1:98590510-98590529 | Msa0901730:intron | 40.0% | |
| AGATGATCCAAAGAAGTGGT+GGG | - | chr6_1:98590511-98590530 | Msa0901730:intron | 40.0% | |
| TTTCGTGATAGCAAACGCAA+TGG | - | chr6_1:98590536-98590555 | Msa0901730:intron | 40.0% | |
| TGATAGCAAACGCAATGGAT+CGG | - | chr6_1:98590541-98590560 | Msa0901730:intron | 40.0% | |
| AGGATGGAAATGTTTCCATC+TGG | - | chr6_1:98590677-98590696 | Msa0901730:intron | 40.0% | |
| ! | GTTTGTTTGGGTTTAACAGG+CGG | + | chr6_1:98590760-98590779 | None:intergenic | 40.0% |
| ! | GTTTTGCAGCAAATCATTCC+AGG | + | chr6_1:98591098-98591117 | None:intergenic | 40.0% |
| CTATTATCCCACCATTTAGC+TGG | + | chr6_1:98591121-98591140 | None:intergenic | 40.0% | |
| GTGGGATAATAGAGTAGACA+AGG | - | chr6_1:98591129-98591148 | Msa0901730:intron | 40.0% | |
| CCCAAAGACAAAGCAGAATA+TGG | + | chr6_1:98591160-98591179 | None:intergenic | 40.0% | |
| TCAGAAATATGCAAGAGCTC+CGG | - | chr6_1:98591255-98591274 | Msa0901730:intron | 40.0% | |
| AGTCTAGATGAAACCCAACT+TGG | + | chr6_1:98591328-98591347 | None:intergenic | 40.0% | |
| TTGGTTTAGGTGATGAATCC+TGG | - | chr6_1:98591743-98591762 | Msa0901730:intron | 40.0% | |
| TGCTGCAAAATCCAGCTAAA+TGG | - | chr6_1:98591773-98591792 | Msa0901730:intron | 40.0% | |
| TGCAAAATCCAGCTAAATGG+TGG | - | chr6_1:98591776-98591795 | Msa0901730:intron | 40.0% | |
| GCAAAATCCAGCTAAATGGT+GGG | - | chr6_1:98591777-98591796 | Msa0901730:intron | 40.0% | |
| CTATTATCCCACCATTTAGC+TGG | + | chr6_1:98591121-98591140 | None:intergenic | 40.0% | |
| ! | ACCACATTTTCTGCTGTCAT+TGG | - | chr6_1:98591820-98591839 | Msa0901730:intron | 40.0% |
| ACCAATGACAGCAGAAAATG+TGG | + | chr6_1:98591824-98591843 | None:intergenic | 40.0% | |
| GTGTCTTTGTGCTTGAAATC+GGG | + | chr6_1:98591940-98591959 | None:intergenic | 40.0% | |
| GGTGTCTTTGTGCTTGAAAT+CGG | + | chr6_1:98591941-98591960 | None:intergenic | 40.0% | |
| GATTTCAAGCACAAAGACAC+CGG | - | chr6_1:98591940-98591959 | Msa0901730:CDS | 40.0% | |
| !! | AATTTTGGCAACACCCAACT+TGG | + | chr6_1:98591991-98592010 | None:intergenic | 40.0% |
| !! | CTTTGTTGTTTCGGCTTCAA+CGG | + | chr6_1:98592018-98592037 | None:intergenic | 40.0% |
| AACAAAGTGCAGAAACTAGC+TGG | - | chr6_1:98592031-98592050 | Msa0901730:CDS | 40.0% | |
| CTGAAGTCGTTTACCAAGTT+CGG | - | chr6_1:98592101-98592120 | Msa0901730:CDS | 40.0% | |
| TACTCCACTTGCATTTGGGA+GGG | - | chr6_1:98586390-98586409 | Msa0901730:three_prime_UTR | 45.0% | |
| AAAACCCTCCCAAATGCAAG+TGG | + | chr6_1:98586397-98586416 | None:intergenic | 45.0% | |
| ! | ACTTGCATTTGGGAGGGTTT+TGG | - | chr6_1:98586396-98586415 | Msa0901730:three_prime_UTR | 45.0% |
| GGAGTAAAACTCGCCGTATT+GGG | + | chr6_1:98586453-98586472 | None:intergenic | 45.0% | |
| AGGAGTAAAACTCGCCGTAT+TGG | + | chr6_1:98586454-98586473 | None:intergenic | 45.0% | |
| ! | TGATTTGCGAATGGTGGTTG+TGG | + | chr6_1:98586515-98586534 | None:intergenic | 45.0% |
| !! | ACCAATTAGGTTGACGGAGT+TGG | + | chr6_1:98586590-98586609 | None:intergenic | 45.0% |
| ACTGAGAAGGATCATGACCA+AGG | + | chr6_1:98586684-98586703 | None:intergenic | 45.0% | |
| TGAGGGTCAACTTTCTACTG+AGG | - | chr6_1:98586783-98586802 | Msa0901730:CDS | 45.0% | |
| TTGTTGTCAGACACCGAACA+TGG | - | chr6_1:98587106-98587125 | Msa0901730:intron | 45.0% | |
| !! | GACATGTGTTGGTGTCATGT+CGG | - | chr6_1:98587226-98587245 | Msa0901730:intron | 45.0% |
| !! | GTGTTGTTGGTGTTGTTGCT+AGG | - | chr6_1:98587359-98587378 | Msa0901730:CDS | 45.0% |
| AAAGCAGCCTTCTTAACACG+AGG | + | chr6_1:98587420-98587439 | None:intergenic | 45.0% | |
| CAAAAGCAGGTACAACCGAA+TGG | + | chr6_1:98588719-98588738 | None:intergenic | 45.0% | |
| CCCTATACAACTGCAAAAGC+AGG | + | chr6_1:98588732-98588751 | None:intergenic | 45.0% | |
| TCTTGCGTCCCTATGTGTTA+GGG | + | chr6_1:98588832-98588851 | None:intergenic | 45.0% | |
| TTCTTGCGTCCCTATGTGTT+AGG | + | chr6_1:98588833-98588852 | None:intergenic | 45.0% | |
| ATCTCGCATCAGATCGAAAG+GGG | - | chr6_1:98589432-98589451 | Msa0901730:intron | 45.0% | |
| TTGGTAGGATCGTTCGATCT+TGG | + | chr6_1:98589567-98589586 | None:intergenic | 45.0% | |
| ! | CCGTACGATTCTAAAGATCC+TGG | + | chr6_1:98589782-98589801 | None:intergenic | 45.0% |
| ! | GTTCCTCAGTTTTCTCGGAA+TGG | + | chr6_1:98590099-98590118 | None:intergenic | 45.0% |
| TGACACAAGGAAATCCTGGA+AGG | - | chr6_1:98590120-98590139 | Msa0901730:intron | 45.0% | |
| ! | TGTACAGCCTTCCATTGACT+GGG | + | chr6_1:98590160-98590179 | None:intergenic | 45.0% |
| ATGTACAGCCTTCCATTGAC+TGG | + | chr6_1:98590161-98590180 | None:intergenic | 45.0% | |
| !!! | CTCTGGCTCTTTTCGTTGTT+TGG | - | chr6_1:98590400-98590419 | Msa0901730:intron | 45.0% |
| CCAAGGACTTGACAAATAGG+CGG | + | chr6_1:98590480-98590499 | None:intergenic | 45.0% | |
| CGCCTATTTGTCAAGTCCTT+GGG | - | chr6_1:98590478-98590497 | Msa0901730:intron | 45.0% | |
| GCCTATTTGTCAAGTCCTTG+GGG | - | chr6_1:98590479-98590498 | Msa0901730:intron | 45.0% | |
| CGAAAATCCCACCACTTCTT+TGG | + | chr6_1:98590521-98590540 | None:intergenic | 45.0% | |
| ! | TGTTTCCATCTGGCTTGACA+AGG | - | chr6_1:98590687-98590706 | Msa0901730:intron | 45.0% |
| AGAAACGGAAAACGGACATG+AGG | + | chr6_1:98591012-98591031 | None:intergenic | 45.0% | |
| TTGGTTTAGGTGATGAGTCC+TGG | - | chr6_1:98591077-98591096 | Msa0901730:intron | 45.0% | |
| TGCTGCAAAACCCAGCTAAA+TGG | - | chr6_1:98591107-98591126 | Msa0901730:intron | 45.0% | |
| TGCAAAACCCAGCTAAATGG+TGG | - | chr6_1:98591110-98591129 | Msa0901730:intron | 45.0% | |
| GCAAAACCCAGCTAAATGGT+GGG | - | chr6_1:98591111-98591130 | Msa0901730:intron | 45.0% | |
| !! | AAGATACTGGTTTAGGGCTG+TGG | - | chr6_1:98591290-98591309 | Msa0901730:CDS | 45.0% |
| GCTCAGAGATTCACCAAGTT+GGG | - | chr6_1:98591312-98591331 | Msa0901730:CDS | 45.0% | |
| GTTGGTACAGAGATTCTCAG+TGG | - | chr6_1:98591464-98591483 | Msa0901730:intron | 45.0% | |
| ! | TGCTTGAAATCGGGTCCTTT+TGG | + | chr6_1:98591931-98591950 | None:intergenic | 45.0% |
| GCTTAGAGGTTCACCAAGTT+GGG | - | chr6_1:98591975-98591994 | Msa0901730:CDS | 45.0% | |
| GTACTCCACTTGCATTTGGG+AGG | - | chr6_1:98586389-98586408 | Msa0901730:three_prime_UTR | 50.0% | |
| !! | AGTAGTTGGTGGTGGTGGAT+CGG | + | chr6_1:98586483-98586502 | None:intergenic | 50.0% |
| TTTGCGAATGGTGGTTGTGG+CGG | + | chr6_1:98586512-98586531 | None:intergenic | 50.0% | |
| GGTTGGAATGGGATTTCGGT+TGG | + | chr6_1:98586559-98586578 | None:intergenic | 50.0% | |
| !! | TGGCGAGTTTGGGTTGGAAT+GGG | + | chr6_1:98586570-98586589 | None:intergenic | 50.0% |
| !! | TTGGCGAGTTTGGGTTGGAA+TGG | + | chr6_1:98586571-98586590 | None:intergenic | 50.0% |
| TTGACGGAGTTGGCGAGTTT+GGG | + | chr6_1:98586580-98586599 | None:intergenic | 50.0% | |
| GCCAACTCCGTCAACCTAAT+TGG | - | chr6_1:98586586-98586605 | Msa0901730:three_prime_UTR | 50.0% | |
| CACTTCCAAACTTCCACCGA+CGG | - | chr6_1:98586628-98586647 | Msa0901730:three_prime_UTR | 50.0% | |
| GCATGTCAGTGTGTCTGTGT+CGG | + | chr6_1:98587178-98587197 | None:intergenic | 50.0% | |
| CACTGACATGTGTCGGATAC+TGG | - | chr6_1:98587256-98587275 | Msa0901730:intron | 50.0% | |
| TTATCCCACTAAGTGGGGGT+CGG | + | chr6_1:98587696-98587715 | None:intergenic | 50.0% | |
| !! | AAGGTCCTTAAAGAGTGCCC+TGG | - | chr6_1:98589312-98589331 | Msa0901730:intron | 50.0% |
| !! | AGGTCCTTAAAGAGTGCCCT+GGG | - | chr6_1:98589313-98589332 | Msa0901730:intron | 50.0% |
| TATTCACGATCCGGATCGGT+AGG | - | chr6_1:98589861-98589880 | Msa0901730:intron | 50.0% | |
| ATTCACGATCCGGATCGGTA+GGG | - | chr6_1:98589862-98589881 | Msa0901730:intron | 50.0% | |
| GGCGGTGTATTTCTTTGCAC+TGG | + | chr6_1:98590462-98590481 | None:intergenic | 50.0% | |
| CCGCCTATTTGTCAAGTCCT+TGG | - | chr6_1:98590477-98590496 | Msa0901730:intron | 50.0% | |
| GCCCCAAGGACTTGACAAAT+AGG | + | chr6_1:98590483-98590502 | None:intergenic | 50.0% | |
| ! | CGCTTGAAGTCAGGGTACTT+TGG | + | chr6_1:98590655-98590674 | None:intergenic | 50.0% |
| CATCCTTGCGCTTGAAGTCA+GGG | + | chr6_1:98590663-98590682 | None:intergenic | 50.0% | |
| GCTTGACAAGGCTCCAAAGT+CGG | - | chr6_1:98590699-98590718 | Msa0901730:intron | 50.0% | |
| GGCTCAGAGATTCACCAAGT+TGG | - | chr6_1:98591311-98591330 | Msa0901730:CDS | 50.0% | |
| AAGCACAAAGACACCGGTGA+AGG | - | chr6_1:98591946-98591965 | Msa0901730:CDS | 50.0% | |
| AGCACAAAGACACCGGTGAA+GGG | - | chr6_1:98591947-98591966 | Msa0901730:CDS | 50.0% | |
| TCTAAGCCATAGCCCTTCAC+CGG | + | chr6_1:98591962-98591981 | None:intergenic | 50.0% | |
| GGCTTAGAGGTTCACCAAGT+TGG | - | chr6_1:98591974-98591993 | Msa0901730:CDS | 50.0% | |
| ! | GGCTTCAACGGTGGCAATTT+TGG | + | chr6_1:98592006-98592025 | None:intergenic | 50.0% |
| !! | TGTTGTTTCGGCTTCAACGG+TGG | + | chr6_1:98592015-98592034 | None:intergenic | 50.0% |
| GTTGACGGAGTTGGCGAGTT+TGG | + | chr6_1:98586581-98586600 | None:intergenic | 55.0% | |
| AAGGCGAGTGATGACAGTGG+CGG | + | chr6_1:98586665-98586684 | None:intergenic | 55.0% | |
| ACCAAGGCGAGTGATGACAG+TGG | + | chr6_1:98586668-98586687 | None:intergenic | 55.0% | |
| GACACACTGACATGCGACAC+TGG | - | chr6_1:98587183-98587202 | Msa0901730:intron | 55.0% | |
| !! | GGTCCTTAAAGAGTGCCCTG+GGG | - | chr6_1:98589314-98589333 | Msa0901730:intron | 55.0% |
| !! | GTCCTTAAAGAGTGCCCTGG+GGG | - | chr6_1:98589315-98589334 | Msa0901730:intron | 55.0% |
| CGCATCAGATCGAAAGGGGA+TGG | - | chr6_1:98589436-98589455 | Msa0901730:intron | 55.0% | |
| TTCACGATCCGGATCGGTAG+GGG | - | chr6_1:98589863-98589882 | Msa0901730:intron | 55.0% | |
| TTCACTCACCCCTACCGATC+CGG | + | chr6_1:98589874-98589893 | None:intergenic | 55.0% | |
| TCATCTAGAAGGTCGCCCCA+AGG | + | chr6_1:98590497-98590516 | None:intergenic | 55.0% | |
| GTACCCTGACTTCAAGCGCA+AGG | - | chr6_1:98590657-98590676 | Msa0901730:intron | 55.0% | |
| CCATCCTTGCGCTTGAAGTC+AGG | + | chr6_1:98590664-98590683 | None:intergenic | 55.0% | |
| CCTGACTTCAAGCGCAAGGA+TGG | - | chr6_1:98590661-98590680 | Msa0901730:intron | 55.0% | |
| ! | TGGAGCCTTGTCAAGCCAGA+TGG | + | chr6_1:98590695-98590714 | None:intergenic | 55.0% |
| AAGACACCGGTGAAGGGCTA+TGG | - | chr6_1:98591953-98591972 | Msa0901730:CDS | 55.0% | |
| GGTGAAGGGCTATGGCTTAG+AGG | - | chr6_1:98591961-98591980 | Msa0901730:CDS | 55.0% | |
| !! | TGGTGGTGGTGGATCGGAGA+CGG | + | chr6_1:98586477-98586496 | None:intergenic | 60.0% |
| !! | GGTGGAGTAGTTGGTGGTGG+TGG | + | chr6_1:98586488-98586507 | None:intergenic | 60.0% |
| CGGAGTTGGCGAGTTTGGGT+TGG | + | chr6_1:98586576-98586595 | None:intergenic | 60.0% | |
| GGTTGCCGTCGGTGGAAGTT+TGG | + | chr6_1:98586636-98586655 | None:intergenic | 60.0% | |
| TGATGACAGTGGCGGCGGAA+GGG | + | chr6_1:98586657-98586676 | None:intergenic | 60.0% | |
| GCCACTGTCATCACTCGCCT+TGG | - | chr6_1:98586664-98586683 | Msa0901730:CDS | 60.0% | |
| CTAAGTGGGGGTCGGCTACA+TGG | + | chr6_1:98587688-98587707 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCCACTTAG+TGG | - | chr6_1:98587688-98587707 | Msa0901730:intron | 60.0% | |
| GTAGCCGACCCCCACTTAGT+GGG | - | chr6_1:98587689-98587708 | Msa0901730:intron | 60.0% | |
| ! | TGCCCCCAGGGCACTCTTTA+AGG | + | chr6_1:98589320-98589339 | None:intergenic | 60.0% |
| !! | TGGTGGTGGATCGGAGACGG+AGG | + | chr6_1:98586474-98586493 | None:intergenic | 65.0% |
| !! | GGCGGTGGAGTAGTTGGTGG+TGG | + | chr6_1:98586491-98586510 | None:intergenic | 65.0% |
| TGTGGCGGCGGTGGAGTAGT+TGG | + | chr6_1:98586497-98586516 | None:intergenic | 65.0% | |
| AATGGTGGTTGTGGCGGCGG+TGG | + | chr6_1:98586506-98586525 | None:intergenic | 65.0% | |
| GCGAATGGTGGTTGTGGCGG+CGG | + | chr6_1:98586509-98586528 | None:intergenic | 65.0% | |
| GTGATGACAGTGGCGGCGGA+AGG | + | chr6_1:98586658-98586677 | None:intergenic | 65.0% | |
| GCGAGTGATGACAGTGGCGG+CGG | + | chr6_1:98586662-98586681 | None:intergenic | 65.0% | |
| AATGCTGGCGAGTGCCCCCA+GGG | + | chr6_1:98589332-98589351 | None:intergenic | 65.0% | |
| AAATGCTGGCGAGTGCCCCC+AGG | + | chr6_1:98589333-98589352 | None:intergenic | 65.0% | |
| GGCGGCGGTGGAGTAGTTGG+TGG | + | chr6_1:98586494-98586513 | None:intergenic | 70.0% | |
| GGCGGAAGGGTTGCCGTCGG+TGG | + | chr6_1:98586644-98586663 | None:intergenic | 75.0% | |
| GGCGGCGGAAGGGTTGCCGT+CGG | + | chr6_1:98586647-98586666 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 98586356 | 98592377 | 98586356 | ID=Msa0901730;Name=Msa0901730 |
| chr6_1 | mRNA | 98586356 | 98592377 | 98586356 | ID=Msa0901730-mRNA-1;Parent=Msa0901730;Name=Msa0901730-mRNA-1;_AED=0.12;_eAED=0.12;_QI=89|1|1|1|1|1|10|306|461 |
| chr6_1 | exon | 98586356 | 98586811 | 98586356 | ID=Msa0901730-mRNA-1:exon:17450;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98586917 | 98586981 | 98586917 | ID=Msa0901730-mRNA-1:exon:17449;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98587327 | 98587474 | 98587327 | ID=Msa0901730-mRNA-1:exon:17448;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98587583 | 98587647 | 98587583 | ID=Msa0901730-mRNA-1:exon:17447;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98587940 | 98588087 | 98587940 | ID=Msa0901730-mRNA-1:exon:17446;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98588171 | 98588274 | 98588171 | ID=Msa0901730-mRNA-1:exon:17445;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98588353 | 98588425 | 98588353 | ID=Msa0901730-mRNA-1:exon:17444;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98588544 | 98588677 | 98588544 | ID=Msa0901730-mRNA-1:exon:17443;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98591262 | 98591352 | 98591262 | ID=Msa0901730-mRNA-1:exon:17442;Parent=Msa0901730-mRNA-1 |
| chr6_1 | exon | 98591881 | 98592377 | 98591881 | ID=Msa0901730-mRNA-1:exon:17441;Parent=Msa0901730-mRNA-1 |
| chr6_1 | five_prime_UTR | 98592289 | 98592377 | 98592289 | ID=Msa0901730-mRNA-1:five_prime_utr;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98591881 | 98592288 | 98591881 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98591262 | 98591352 | 98591262 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98588544 | 98588677 | 98588544 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98588353 | 98588425 | 98588353 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98588171 | 98588274 | 98588171 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98587940 | 98588087 | 98587940 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98587583 | 98587647 | 98587583 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98587327 | 98587474 | 98587327 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98586917 | 98586981 | 98586917 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | CDS | 98586662 | 98586811 | 98586662 | ID=Msa0901730-mRNA-1:cds;Parent=Msa0901730-mRNA-1 |
| chr6_1 | three_prime_UTR | 98586356 | 98586661 | 98586356 | ID=Msa0901730-mRNA-1:three_prime_utr;Parent=Msa0901730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
