AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1012060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012060 MtrunA17_Chr7g0223681 76.789 517 118 1 481 997 15 529 0.0 800
Msa1012060 MtrunA17_Chr7g0223681 77.339 481 108 1 2 482 20 499 0.0 755
Msa1012060 MtrunA17_Chr8g0350731 72.810 548 140 2 455 1002 113 651 0.0 795
Msa1012060 MtrunA17_Chr8g0350731 79.583 480 97 1 2 481 137 615 0.0 788
Msa1012060 MtrunA17_Chr7g0223711 74.324 518 130 2 481 997 104 619 0.0 791
Msa1012060 MtrunA17_Chr7g0223711 77.339 481 109 0 2 482 109 589 0.0 778
Msa1012060 MtrunA17_Chr7g0223751 73.755 522 135 1 481 1002 104 623 0.0 785
Msa1012060 MtrunA17_Chr7g0223751 75.569 483 117 1 1 483 108 589 0.0 758
Msa1012060 MtrunA17_Chr7g0223631 75.962 520 109 3 478 997 101 604 0.0 775
Msa1012060 MtrunA17_Chr7g0223631 72.557 481 117 3 2 482 109 574 0.0 697
Msa1012060 MtrunA17_Chr7g0223541 77.083 480 110 0 2 481 66 545 0.0 775
Msa1012060 MtrunA17_Chr7g0223541 71.319 523 147 2 481 1002 61 581 0.0 762
Msa1012060 MtrunA17_Chr7g0223621 76.507 481 112 1 1 481 108 587 0.0 751
Msa1012060 MtrunA17_Chr7g0223621 71.233 511 145 1 481 991 104 612 0.0 737
Msa1012060 MtrunA17_Chr7g0248131 72.115 520 141 3 481 997 105 623 0.0 746
Msa1012060 MtrunA17_Chr7g0248131 73.499 483 125 3 2 482 110 591 0.0 718
Msa1012060 MtrunA17_Chr7g0223701 69.590 536 154 3 481 1007 104 639 0.0 745
Msa1012060 MtrunA17_Chr7g0223701 71.575 489 129 4 2 481 109 596 0.0 700
Msa1012060 MtrunA17_Chr7g0248151 71.098 519 147 2 481 997 104 621 0.0 745
Msa1012060 MtrunA17_Chr7g0248151 73.085 483 128 2 1 482 108 589 0.0 716
Msa1012060 MtrunA17_Chr7g0223731 71.760 517 144 1 478 994 101 615 0.0 744
Msa1012060 MtrunA17_Chr7g0223731 75.052 481 119 1 2 482 109 588 0.0 736
Msa1012060 MtrunA17_Chr7g0223741 74.274 482 124 0 2 483 109 590 0.0 741
Msa1012060 MtrunA17_Chr7g0223741 71.976 496 136 2 481 975 104 597 0.0 720
Msa1012060 MtrunA17_Chr7g0223031 72.614 482 131 1 2 483 109 589 0.0 721
Msa1012060 MtrunA17_Chr7g0223031 70.646 511 148 1 481 991 104 612 0.0 720
Msa1012060 MtrunA17_Chr7g0223801 62.840 514 189 1 480 993 102 613 0.0 659
Msa1012060 MtrunA17_Chr7g0223801 63.768 483 170 3 1 481 107 586 0.0 635
Msa1012060 MtrunA17_Chr2g0293581 63.584 519 184 4 480 995 104 620 0.0 657
Msa1012060 MtrunA17_Chr2g0293581 64.876 484 169 1 1 483 109 592 0.0 655
Msa1012060 MtrunA17_Chr4g0031321 63.583 508 180 4 482 986 103 608 0.0 655
Msa1012060 MtrunA17_Chr4g0031321 66.316 475 158 2 1 473 106 580 0.0 647
Msa1012060 MtrunA17_Chr7g0221661 64.188 511 180 2 480 989 103 611 0.0 653
Msa1012060 MtrunA17_Chr7g0221661 63.655 487 175 2 1 486 108 593 0.0 627
Msa1012060 MtrunA17_Chr7g0223781 66.075 507 167 3 481 986 104 606 0.0 652
Msa1012060 MtrunA17_Chr7g0223781 65.975 482 160 3 1 481 108 586 0.0 647
Msa1012060 MtrunA17_Chr4g0031301 63.386 508 181 4 482 986 103 608 0.0 652
Msa1012060 MtrunA17_Chr4g0031301 66.526 475 157 2 1 473 106 580 0.0 648
Msa1012060 MtrunA17_Chr7g0262821 61.714 525 196 4 482 1003 103 625 0.0 649
Msa1012060 MtrunA17_Chr7g0262821 66.879 471 154 2 1 469 106 576 0.0 643
Msa1012060 MtrunA17_Chr7g0233311 62.863 517 187 3 480 993 103 617 0.0 649
Msa1012060 MtrunA17_Chr7g0233311 64.876 484 167 3 1 482 108 590 0.0 639
Msa1012060 MtrunA17_Chr7g0223181 63.439 506 180 4 482 984 103 606 0.0 648
Msa1012060 MtrunA17_Chr7g0223181 65.424 483 165 2 1 481 106 588 0.0 645
Msa1012060 MtrunA17_Chr7g0223291 61.804 521 194 4 482 999 103 621 0.0 647
Msa1012060 MtrunA17_Chr7g0223291 65.895 475 160 2 1 473 106 580 0.0 642
Msa1012060 MtrunA17_Chr5g0427901 62.095 525 185 3 481 993 104 626 0.0 643
Msa1012060 MtrunA17_Chr5g0427901 62.880 493 170 3 1 481 108 599 0.0 623
Msa1012060 MtrunA17_Chr2g0298861 64.463 484 169 3 2 483 120 602 0.0 641
Msa1012060 MtrunA17_Chr2g0298861 63.086 512 184 4 480 988 114 623 0.0 635
Msa1012060 MtrunA17_Chr7g0223721 62.768 513 187 3 478 988 101 611 0.0 637
Msa1012060 MtrunA17_Chr7g0223721 62.241 482 180 2 1 481 108 588 0.0 621
Msa1012060 MtrunA17_Chr2g0298851 62.669 517 187 5 480 993 103 616 0.0 635
Msa1012060 MtrunA17_Chr2g0298851 64.389 483 168 4 1 481 108 588 0.0 624
Msa1012060 MtrunA17_Chr4g0073741 60.653 521 200 4 482 999 102 620 0.0 634
Msa1012060 MtrunA17_Chr4g0073741 61.404 513 193 4 1 510 105 615 0.0 629
Msa1012060 MtrunA17_Chr2g0287631 63.975 483 173 1 1 482 108 590 0.0 619
Msa1012060 MtrunA17_Chr2g0287631 62.597 516 188 4 481 993 104 617 0.0 612
Msa1012060 MtrunA17_Chr4g0040931 61.493 509 192 3 478 984 101 607 0.0 617
Msa1012060 MtrunA17_Chr4g0040931 62.448 482 179 2 1 481 108 588 0.0 615
Msa1012060 MtrunA17_Chr7g0225671 61.914 512 190 3 475 984 105 613 0.0 617
Msa1012060 MtrunA17_Chr7g0225671 63.071 482 175 3 1 481 115 594 0.0 611
Msa1012060 MtrunA17_Chr7g0223851 60.811 518 199 3 478 993 110 625 0.0 615
Msa1012060 MtrunA17_Chr7g0223851 62.448 482 179 2 1 481 117 597 0.0 609
Msa1012060 MtrunA17_Chr4g0012541 62.626 495 182 2 478 971 92 584 0.0 614
Msa1012060 MtrunA17_Chr4g0012541 62.033 482 181 2 1 481 99 579 0.0 605
Msa1012060 MtrunA17_Chr8g0390821 59.924 529 184 5 478 994 142 654 0.0 603
Msa1012060 MtrunA17_Chr8g0390821 59.514 494 173 5 1 482 149 627 0.0 581
Msa1012060 MtrunA17_Chr7g0217971 60.521 499 171 2 480 978 103 575 0.0 587
Msa1012060 MtrunA17_Chr7g0217971 59.667 481 169 2 1 481 108 563 0.0 574
Msa1012060 MtrunA17_Chr7g0223821 60.742 512 192 3 478 983 101 609 0.0 582
Msa1012060 MtrunA17_Chr7g0223821 61.777 484 180 3 1 481 108 589 0.0 580
Msa1012060 MtrunA17_Chr2g0296391 66.508 421 140 1 1 420 108 528 0.0 578
Msa1012060 MtrunA17_Chr2g0296391 66.822 428 138 3 480 905 103 528 0.0 572
Msa1012060 MtrunA17_Chr7g0233301 57.060 517 186 3 480 993 103 586 0.0 577
Msa1012060 MtrunA17_Chr7g0233301 58.557 485 167 4 1 483 108 560 0.0 576
Msa1012060 MtrunA17_Chr2g0293601 63.747 411 114 2 1 410 108 484 0.0 537
Msa1012060 MtrunA17_Chr2g0293601 63.636 418 114 3 480 895 103 484 1.61e-177 525
Msa1012060 MtrunA17_Chr6g0462601 55.599 509 219 4 480 983 101 607 1.07e-180 539
Msa1012060 MtrunA17_Chr6g0462601 55.761 486 214 1 2 486 107 592 7.75e-179 534
Msa1012060 MtrunA17_Chr6g0462681 54.070 516 233 3 480 993 101 614 5.05e-180 539
Msa1012060 MtrunA17_Chr6g0462681 55.907 474 208 1 1 473 106 579 1.74e-175 527
Msa1012060 MtrunA17_Chr7g0223831 55.273 512 195 5 480 988 103 583 1.09e-179 535
Msa1012060 MtrunA17_Chr7g0223831 55.785 484 182 5 1 482 108 561 1.84e-176 527
Msa1012060 MtrunA17_Chr6g0462711 54.580 524 229 4 480 996 103 624 5.70e-179 536
Msa1012060 MtrunA17_Chr6g0462711 56.367 479 203 2 1 473 108 586 2.27e-176 530
Msa1012060 MtrunA17_Chr2g0331381 60.090 446 116 2 480 925 99 482 2.90e-177 525
Msa1012060 MtrunA17_Chr2g0331381 57.727 440 125 4 1 440 104 482 4.20e-169 503
Msa1012060 MtrunA17_Chr6g0462611 53.682 516 233 4 480 993 51 562 4.29e-177 529
Msa1012060 MtrunA17_Chr6g0462611 55.603 473 209 1 1 473 56 527 1.65e-175 525
Msa1012060 MtrunA17_Chr7g0215261 54.883 512 192 5 480 988 103 578 6.78e-177 528
Msa1012060 MtrunA17_Chr7g0215261 55.280 483 178 5 1 481 108 554 2.93e-171 513
Msa1012060 MtrunA17_Chr6g0462641 55.876 485 205 4 480 957 101 583 9.47e-174 523
Msa1012060 MtrunA17_Chr6g0462641 55.021 478 209 2 1 472 106 583 6.95e-171 515
Msa1012060 MtrunA17_Chr6g0462771 55.876 485 205 4 480 957 101 583 3.20e-171 515
Msa1012060 MtrunA17_Chr6g0462771 55.021 478 209 2 1 472 106 583 1.56e-168 508
Msa1012060 MtrunA17_Chr7g0228281 55.809 482 166 5 1 481 169 604 2.42e-169 510
Msa1012060 MtrunA17_Chr7g0228281 54.108 499 181 4 474 971 158 609 7.70e-167 503
Msa1012060 MtrunA17_Chr8g0388761 53.239 494 221 7 481 969 130 618 4.84e-169 510
Msa1012060 MtrunA17_Chr8g0388761 53.734 482 217 4 8 486 142 620 1.15e-168 509
Msa1012060 MtrunA17_Chr8g0388671 53.441 494 220 7 481 969 130 618 1.31e-168 509
Msa1012060 MtrunA17_Chr8g0388671 54.393 478 212 4 8 482 142 616 3.66e-168 508
Msa1012060 MtrunA17_Chr2g0284681 54.979 482 200 7 482 954 102 575 6.10e-168 505
Msa1012060 MtrunA17_Chr2g0284681 54.664 461 201 4 1 453 105 565 3.01e-163 493
Msa1012060 MtrunA17_Chr1g0166551 51.248 521 162 4 470 988 66 496 8.39e-166 496
Msa1012060 MtrunA17_Chr1g0166551 51.553 483 148 3 1 483 78 474 1.16e-160 483
Msa1012060 MtrunA17_Chr2g0293561 73.897 272 71 0 480 751 103 374 1.11e-144 437
Msa1012060 MtrunA17_Chr2g0293561 73.034 267 72 0 1 267 108 374 2.01e-141 428
Msa1012060 MtrunA17_Chr6g0462861 47.510 482 233 6 2 473 98 569 2.84e-134 419
Msa1012060 MtrunA17_Chr6g0462861 46.341 492 237 9 480 958 92 569 2.60e-129 406
Msa1012060 MtrunA17_Chr2g0279901 48.115 451 218 7 9 454 158 597 6.84e-127 400
Msa1012060 MtrunA17_Chr2g0279901 48.559 451 213 9 493 937 158 595 7.93e-125 395
Msa1012060 MtrunA17_Chr4g0049501 47.333 450 222 7 10 454 156 595 1.51e-123 392
Msa1012060 MtrunA17_Chr4g0049501 47.556 450 218 9 494 937 156 593 4.07e-122 388
Msa1012060 MtrunA17_Chr2g0277021 46.993 449 224 6 11 454 175 614 4.69e-122 389
Msa1012060 MtrunA17_Chr2g0277021 44.306 483 250 9 495 971 175 644 4.37e-121 386
Msa1012060 MtrunA17_Chr2g0299821 57.910 335 131 3 438 770 67 393 3.03e-120 376
Msa1012060 MtrunA17_Chr2g0299821 62.329 292 108 1 1 290 106 397 3.02e-119 374
Msa1012060 MtrunA17_Chr2g0299821 55.670 97 33 3 344 432 390 484 1.74e-19 93.2
Msa1012060 MtrunA17_Chr2g0299921 66.894 293 95 1 481 773 1122 1412 7.75e-119 401
Msa1012060 MtrunA17_Chr2g0299921 60.000 335 129 2 1 335 1126 1455 2.57e-117 397
Msa1012060 MtrunA17_Chr2g0299921 64.527 296 102 2 478 772 1503 1796 7.47e-107 366
Msa1012060 MtrunA17_Chr2g0299921 66.197 284 93 2 1 283 1510 1791 3.58e-106 364
Msa1012060 MtrunA17_Chr2g0299791 66.212 293 94 2 473 765 1130 1417 4.03e-118 395
Msa1012060 MtrunA17_Chr2g0299791 67.730 282 89 1 1 282 1139 1418 5.38e-118 394
Msa1012060 MtrunA17_Chr2g0293271 54.237 354 90 4 480 833 125 406 3.25e-116 363
Msa1012060 MtrunA17_Chr2g0293271 53.714 350 92 3 1 350 130 409 8.60e-115 359
Msa1012060 MtrunA17_Chr2g0299851 65.371 283 96 1 1 283 1135 1415 2.13e-115 387
Msa1012060 MtrunA17_Chr2g0299851 64.336 286 100 1 482 767 1132 1415 3.06e-114 384
Msa1012060 MtrunA17_Chr7g0223761 52.279 373 133 3 618 988 3 332 4.17e-115 358
Msa1012060 MtrunA17_Chr7g0223761 50.430 349 130 3 134 481 3 309 2.90e-108 340
Msa1012060 MtrunA17_Chr7g0245531 58.095 315 129 2 682 995 2 314 1.08e-112 350
Msa1012060 MtrunA17_Chr7g0245531 59.091 286 115 2 198 482 2 286 1.69e-107 337
Msa1012060 MtrunA17_Chr2g0299881 65.035 286 94 3 1 282 1135 1418 1.75e-108 369
Msa1012060 MtrunA17_Chr2g0299881 60.984 305 112 3 481 780 1131 1433 2.85e-107 365
Msa1012060 MtrunA17_Chr2g0299881 60.274 73 27 1 557 627 1403 1475 5.88e-18 89.7
Msa1012060 MtrunA17_Chr2g0299881 61.194 67 26 0 77 143 1409 1475 1.20e-17 89.0
Msa1012060 MtrunA17_Chr1g0152001 57.383 298 123 2 692 988 1 295 1.20e-100 318
Msa1012060 MtrunA17_Chr1g0152001 57.299 274 115 2 208 481 1 272 4.59e-97 309
Msa1012060 MtrunA17_Chr7g0223671 89.441 161 17 0 481 641 38 198 3.35e-97 305
Msa1012060 MtrunA17_Chr7g0223671 92.857 154 11 0 2 155 43 196 1.13e-95 301
Msa1012060 MtrunA17_Chr6g0462631 51.258 318 106 5 480 793 25 297 1.43e-94 301
Msa1012060 MtrunA17_Chr6g0462631 50.799 313 105 5 1 309 30 297 6.49e-90 289
Msa1012060 MtrunA17_Chr1g0188601 75.556 180 44 0 480 659 12 191 2.19e-92 291
Msa1012060 MtrunA17_Chr1g0188601 75.429 175 43 0 1 175 17 191 3.52e-89 283
Msa1012060 MtrunA17_Chr7g0245521 70.718 181 53 0 469 649 92 272 3.39e-84 273
Msa1012060 MtrunA17_Chr7g0245521 72.121 165 46 0 1 165 108 272 3.71e-79 259
Msa1012060 MtrunA17_Chr1g0151991 68.617 188 59 0 481 668 104 291 1.00e-83 272
Msa1012060 MtrunA17_Chr1g0151991 68.478 184 58 0 1 184 108 291 5.66e-82 267
Msa1012060 MtrunA17_Chr1g0188611 53.535 297 127 4 699 993 1 288 2.62e-79 260
Msa1012060 MtrunA17_Chr1g0188611 54.745 274 114 4 215 486 1 266 8.52e-78 256
Msa1012060 MtrunA17_Chr6g0462751 45.833 312 111 3 480 790 50 304 1.18e-75 251
Msa1012060 MtrunA17_Chr6g0462751 46.205 303 105 3 1 302 55 300 3.80e-73 244
Msa1012060 MtrunA17_Chr6g0462791 64.205 176 62 1 1 176 1 175 1.41e-71 234
Msa1012060 MtrunA17_Chr6g0462791 63.636 176 63 1 485 660 1 175 1.68e-70 232
Msa1012060 MtrunA17_Chr5g0394391 37.047 386 224 8 15 387 142 521 1.57e-71 248
Msa1012060 MtrunA17_Chr5g0394391 35.872 407 239 9 480 872 123 521 1.06e-66 234
Msa1012060 MtrunA17_Chr7g0223771 71.622 148 42 0 478 625 9 156 4.97e-70 230
Msa1012060 MtrunA17_Chr7g0223771 73.188 138 37 0 1 138 16 153 2.55e-66 220
Msa1012060 MtrunA17_Chr4g0046881 74.286 140 36 0 507 646 9 148 1.91e-67 222
Msa1012060 MtrunA17_Chr4g0046881 71.429 140 40 0 23 162 9 148 1.45e-65 217
Msa1012060 MtrunA17_Chr3g0120101 33.239 355 210 7 15 347 140 489 2.23e-52 198
Msa1012060 MtrunA17_Chr3g0120101 32.108 408 236 11 499 872 140 540 5.25e-50 191
Msa1012060 MtrunA17_Chr6g0462701 53.571 168 54 1 480 647 25 168 8.67e-51 176
Msa1012060 MtrunA17_Chr6g0462701 53.988 163 51 1 1 163 30 168 1.15e-48 170
Msa1012060 MtrunA17_Chr4g0064621 34.750 400 247 8 11 398 255 652 5.96e-50 189
Msa1012060 MtrunA17_Chr4g0064621 33.099 426 262 11 469 881 235 650 4.11e-45 174
Msa1012060 MtrunA17_Chr4g0060241 32.558 387 239 9 17 389 128 506 6.69e-50 186
Msa1012060 MtrunA17_Chr4g0060241 32.225 391 242 10 501 877 128 509 3.40e-47 177
Msa1012060 MtrunA17_Chr5g0394221 38.811 286 158 7 676 956 69 342 4.25e-49 178
Msa1012060 MtrunA17_Chr5g0394221 37.956 274 165 4 184 455 61 331 1.75e-47 173
Msa1012060 MtrunA17_Chr5g0442171 34.954 329 195 7 63 381 1 320 2.17e-48 175
Msa1012060 MtrunA17_Chr5g0442171 35.224 335 187 13 547 866 1 320 7.51e-42 156
Msa1012060 MtrunA17_Chr4g0046871 81.000 100 19 0 229 328 6 105 3.60e-48 166
Msa1012060 MtrunA17_Chr4g0046871 78.571 98 21 0 717 814 10 107 2.42e-45 158
Msa1012060 MtrunA17_Chr4g0004331 33.141 347 215 5 481 813 96 439 1.26e-47 183
Msa1012060 MtrunA17_Chr4g0004331 32.836 335 208 5 1 321 100 431 6.07e-47 181
Msa1012060 MtrunA17_Chr3g0098761 27.778 558 338 17 485 984 100 650 1.33e-46 179
Msa1012060 MtrunA17_Chr3g0098761 33.437 323 209 5 1 321 100 418 2.13e-46 179
Msa1012060 MtrunA17_Chr2g0331901 31.129 363 231 6 481 830 96 452 2.97e-46 179
Msa1012060 MtrunA17_Chr2g0331901 30.812 357 230 5 1 344 100 452 5.21e-46 179
Msa1012060 MtrunA17_Chr7g0223861 71.296 108 31 0 478 585 27 134 5.78e-46 161
Msa1012060 MtrunA17_Chr7g0223861 71.287 101 29 0 1 101 34 134 2.46e-42 150
Msa1012060 MtrunA17_Chr7g0245541 48.023 177 90 2 310 485 1 176 3.13e-45 161
Msa1012060 MtrunA17_Chr7g0245541 43.564 202 111 2 794 994 1 200 5.63e-42 152
Msa1012060 MtrunA17_Chr5g0444001 32.927 328 210 6 1 321 100 424 4.24e-44 168
Msa1012060 MtrunA17_Chr5g0444001 31.548 336 220 6 481 809 96 428 1.04e-40 158
Msa1012060 MtrunA17_Chr6g0462691 56.338 142 61 1 215 355 1 142 4.26e-43 154
Msa1012060 MtrunA17_Chr6g0462691 54.861 144 62 2 699 841 1 142 1.82e-42 152
Msa1012060 MtrunA17_Chr5g0394231 38.071 197 72 3 481 676 34 181 2.28e-34 130
Msa1012060 MtrunA17_Chr5g0394231 37.306 193 71 3 1 192 38 181 3.39e-32 124
Msa1012060 MtrunA17_Chr6g0481381 71.622 74 21 0 553 626 1 74 1.07e-29 116
Msa1012060 MtrunA17_Chr6g0481381 67.568 74 24 0 69 142 1 74 5.21e-28 112
Msa1012060 MtrunA17_Chr7g0223661 54.167 120 12 1 692 811 1 77 1.14e-29 112
Msa1012060 MtrunA17_Chr7g0223661 47.500 120 20 1 208 327 1 77 3.73e-25 100
Msa1012060 MtrunA17_Chr7g0223881 61.842 76 28 1 665 740 9 83 2.91e-23 94.7
Msa1012060 MtrunA17_Chr7g0223881 59.211 76 30 1 181 256 9 83 3.24e-23 94.7
Msa1012060 MtrunA17_Chr7g0221651 52.381 84 40 0 592 675 1 84 1.81e-22 92.8
Msa1012060 MtrunA17_Chr7g0221651 52.381 84 40 0 108 191 1 84 2.65e-22 92.0
Msa1012060 MtrunA17_Chr2g0284661 54.217 83 37 1 261 342 61 143 1.18e-17 80.9
Msa1012060 MtrunA17_Chr2g0284661 45.783 83 44 1 745 826 61 143 1.96e-14 71.6
Msa1012060 MtrunA17_Chr6g0462801 59.091 66 22 1 215 275 1 66 1.23e-16 75.5
Msa1012060 MtrunA17_Chr6g0462801 59.091 66 22 1 699 759 1 66 1.15e-15 72.8
Msa1012060 MtrunA17_Chr7g0223871 41.414 99 58 0 383 481 6 104 5.69e-16 75.9
Msa1012060 MtrunA17_Chr7g0223871 37.607 117 72 1 869 984 7 123 1.21e-14 72.0
Msa1012060 MtrunA17_Chr6g0481391 56.140 57 25 0 480 536 75 131 3.08e-15 73.6
Msa1012060 MtrunA17_Chr6g0481391 57.692 52 22 0 1 52 80 131 5.28e-13 67.0
Msa1012060 MtrunA17_Chr2g0299891 76.744 43 10 0 208 250 1 43 3.23e-15 71.6
Msa1012060 MtrunA17_Chr2g0299891 72.093 43 12 0 692 734 1 43 1.12e-13 67.0
Msa1012060 MtrunA17_Chr4g0064651 41.489 94 54 1 290 382 29 122 6.45e-15 72.4
Msa1012060 MtrunA17_Chr4g0064651 41.053 95 52 3 774 866 29 121 1.22e-11 62.8
Msa1012060 MtrunA17_Chr7g0223791 42.529 87 50 0 860 946 90 176 1.18e-14 73.2
Msa1012060 MtrunA17_Chr7g0223791 32.394 142 81 3 321 462 51 177 1.84e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012060 AT3G12580.1 62.956 521 188 4 482 999 103 621 0.0 664
Msa1012060 AT3G12580.1 66.874 483 158 2 1 481 106 588 0.0 659
Msa1012060 AT5G02500.1 62.992 508 183 4 482 986 103 608 0.0 649
Msa1012060 AT5G02500.1 66.105 475 159 2 1 473 106 580 0.0 645
Msa1012060 AT5G02490.1 62.205 508 187 4 482 986 103 608 0.0 642
Msa1012060 AT5G02490.1 63.975 483 172 2 1 481 106 588 0.0 635
Msa1012060 AT3G09440.1 65.895 475 160 2 1 473 106 580 0.0 634
Msa1012060 AT3G09440.1 61.988 513 190 4 477 986 98 608 0.0 633
Msa1012060 AT3G09440.4 65.895 475 160 2 1 473 106 580 0.0 634
Msa1012060 AT3G09440.4 61.988 513 190 4 477 986 98 608 0.0 633
Msa1012060 AT3G09440.2 65.895 475 160 2 1 473 106 580 0.0 634
Msa1012060 AT3G09440.2 61.988 513 190 4 477 986 98 608 0.0 633
Msa1012060 AT3G09440.3 65.895 475 160 2 1 473 106 580 0.0 634
Msa1012060 AT3G09440.3 61.988 513 190 4 477 986 98 608 0.0 633
Msa1012060 AT1G16030.1 60.461 521 201 4 482 999 102 620 0.0 632
Msa1012060 AT1G16030.1 62.947 475 174 2 1 473 105 579 0.0 618
Msa1012060 AT1G56410.1 60.971 515 194 5 1 512 106 616 0.0 619
Msa1012060 AT1G56410.1 59.730 519 202 5 482 997 103 617 0.0 613
Msa1012060 AT5G28540.1 54.012 511 225 7 481 986 129 634 4.29e-175 526
Msa1012060 AT5G28540.1 54.812 478 210 4 8 482 141 615 3.67e-170 513
Msa1012060 AT5G42020.1 54.012 511 225 7 481 986 129 634 1.28e-174 525
Msa1012060 AT5G42020.1 54.393 478 212 4 8 482 141 615 1.75e-169 512
Msa1012060 AT5G42020.3 54.012 511 225 7 481 986 134 639 3.78e-174 524
Msa1012060 AT5G42020.3 54.393 478 212 4 8 482 146 620 4.69e-169 511
Msa1012060 AT1G09080.2 52.317 518 238 6 481 994 134 646 5.64e-162 492
Msa1012060 AT1G09080.2 54.526 475 210 4 2 473 139 610 7.35e-160 487
Msa1012060 AT1G09080.1 52.317 518 238 6 481 994 144 656 1.02e-161 492
Msa1012060 AT1G09080.1 54.526 475 210 4 2 473 149 620 1.08e-159 486
Msa1012060 AT5G02500.2 73.171 287 76 1 482 767 103 389 5.77e-145 443
Msa1012060 AT5G02500.2 73.050 282 76 0 1 282 106 387 2.12e-144 441
Msa1012060 AT5G02500.2 39.785 93 56 0 894 986 386 478 9.08e-13 72.4
Msa1012060 AT5G42020.2 56.456 395 162 7 481 870 129 518 6.73e-137 425
Msa1012060 AT5G42020.2 51.016 443 204 7 8 441 141 579 6.17e-136 422
Msa1012060 AT5G49910.1 47.439 449 222 6 11 454 184 623 1.19e-122 391
Msa1012060 AT5G49910.1 43.495 515 267 12 495 1000 184 683 3.63e-121 387
Msa1012060 AT5G09590.1 47.427 447 220 7 11 452 163 599 3.02e-122 389
Msa1012060 AT5G09590.1 47.216 449 219 9 495 937 163 599 5.70e-120 383
Msa1012060 AT4G24280.1 46.993 449 224 6 11 454 184 623 3.55e-122 390
Msa1012060 AT4G24280.1 42.857 511 267 10 434 938 131 622 6.06e-120 384
Msa1012060 AT4G37910.1 47.439 449 221 7 11 454 158 596 3.21e-119 381
Msa1012060 AT4G37910.1 47.439 449 218 9 495 937 158 594 1.88e-116 374
Msa1012060 AT4G37910.2 47.439 449 221 7 11 454 158 596 3.21e-119 381
Msa1012060 AT4G37910.2 47.439 449 218 9 495 937 158 594 1.88e-116 374
Msa1012060 AT2G32120.1 33.412 422 255 8 15 425 143 549 4.81e-61 219
Msa1012060 AT2G32120.1 32.632 475 286 12 429 885 66 524 1.57e-59 214
Msa1012060 AT2G32120.2 33.412 422 255 8 15 425 143 549 4.81e-61 219
Msa1012060 AT2G32120.2 32.632 475 286 12 429 885 66 524 1.57e-59 214
Msa1012060 AT1G11660.2 27.846 571 338 14 486 997 64 619 1.10e-53 201
Msa1012060 AT1G11660.2 28.346 508 295 12 2 452 64 559 2.38e-52 197
Msa1012060 AT1G11660.4 27.544 570 341 13 486 997 101 656 1.96e-53 201
Msa1012060 AT1G11660.4 28.008 507 298 11 2 452 101 596 4.24e-52 196
Msa1012060 AT1G11660.3 27.544 570 341 13 486 997 101 656 1.96e-53 201
Msa1012060 AT1G11660.3 28.008 507 298 11 2 452 101 596 4.24e-52 196
Msa1012060 AT1G11660.1 27.544 570 341 13 486 997 101 656 1.96e-53 201
Msa1012060 AT1G11660.1 28.008 507 298 11 2 452 101 596 4.24e-52 196
Msa1012060 AT4G16660.1 32.958 355 211 8 16 348 140 489 5.60e-50 191
Msa1012060 AT4G16660.1 31.450 407 238 10 500 872 140 539 2.43e-49 189
Msa1012060 AT4G16660.2 32.768 354 213 7 16 348 164 513 8.74e-50 191
Msa1012060 AT4G16660.2 31.281 406 240 9 500 872 164 563 4.05e-49 189
Msa1012060 AT1G79920.3 31.412 347 221 5 481 813 96 439 3.47e-46 178
Msa1012060 AT1G79920.3 31.642 335 212 5 1 321 100 431 6.91e-46 177
Msa1012060 AT1G79920.2 31.412 347 221 5 481 813 96 439 3.47e-46 178
Msa1012060 AT1G79920.2 31.642 335 212 5 1 321 100 431 6.91e-46 177
Msa1012060 AT1G79920.4 31.412 347 221 5 481 813 96 439 3.47e-46 178
Msa1012060 AT1G79920.4 31.642 335 212 5 1 321 100 431 6.91e-46 177
Msa1012060 AT1G79920.1 31.412 347 221 5 481 813 96 439 3.87e-46 178
Msa1012060 AT1G79920.1 31.642 335 212 5 1 321 100 431 7.57e-46 177
Msa1012060 AT1G79930.2 30.641 359 230 5 481 826 96 448 7.46e-46 178
Msa1012060 AT1G79930.2 30.838 334 216 4 1 321 100 431 4.16e-45 176
Msa1012060 AT1G79930.1 30.641 359 230 5 481 826 96 448 1.50e-45 177
Msa1012060 AT1G79930.1 29.581 382 234 6 1 349 100 479 6.92e-45 175

Find 196 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAACCTCCTCAGGGCTTT+TGG 0.118944 7_1:+17131526 None:intergenic
CGCAACCTCCTCAAGGCTTT+TGG 0.157336 7_1:+17130074 None:intergenic
AGCAATTTCACCTGCATCTT+TGG 0.215804 7_1:+17130376 None:intergenic
AGCAATTTCACCTGCATCTT+TGG 0.215804 7_1:+17131828 None:intergenic
TGTTTCTCTTCTCACAATTA+AGG 0.222042 7_1:-17130225 Msa1012060:CDS
CCAAAGCAGTGTCTCAATTA+TGG 0.242946 7_1:-17130996 Msa1012060:CDS
TCCTTGTTGGTGGTTCTTCT+AGG 0.249840 7_1:-17129839 Msa1012060:CDS
TCCTTGTTGGTGGTTCTTCT+AGG 0.249840 7_1:-17131291 Msa1012060:CDS
TTTCAAGTCAAGGCCACTTC+TGG 0.262714 7_1:-17130194 Msa1012060:CDS
CCTTGAAATTGTCAGCTTCC+TGG 0.269169 7_1:+17129289 None:intergenic
CCTGATGAGGTTGTTGCTTA+TGG 0.280214 7_1:-17131202 Msa1012060:CDS
TGCTTATGGTGCAGCTGTTC+AGG 0.291539 7_1:-17131188 Msa1012060:CDS
ATTACAATAACTAATGAAAA+TGG 0.292577 7_1:-17129345 Msa1012060:CDS
GATCAATTCTGCAATGATAA+AGG 0.305844 7_1:-17130594 Msa1012060:CDS
AAGAATTTCGCAACCTCCTC+AGG 0.310290 7_1:+17131518 None:intergenic
TGTAATAACTGCCTCACTTT+AGG 0.312891 7_1:+17129813 None:intergenic
AGAACTTTCTTATATCAATA+AGG 0.318987 7_1:-17130027 Msa1012060:CDS
AATTCATTACCTTCAACCTT+AGG 0.323530 7_1:+17129555 None:intergenic
ATTACAATAACAAATGAAAA+TGG 0.324499 7_1:-17130800 Msa1012060:CDS
TGCAATAGCTGCTTCACTTT+GGG 0.324854 7_1:+17131265 None:intergenic
GATTAATTCTGCAATGATAA+AGG 0.326851 7_1:-17129139 Msa1012060:CDS
ACATCTTGAAGCGTCAGATT+TGG 0.329702 7_1:+17131133 None:intergenic
TAAAGTGAGGCAGTTATTAC+AGG 0.333837 7_1:-17129811 Msa1012060:CDS
CCTGATGAGGCTGTTGCTTA+TGG 0.340665 7_1:-17129750 Msa1012060:CDS
TAAGTTTGAGCAACTGAATA+TGG 0.354840 7_1:-17131395 Msa1012060:CDS
AGCCTGTGAGAACAATTTAC+TGG 0.354866 7_1:-17130951 Msa1012060:CDS
TAAGTTTGAGCAACTGAATA+TGG 0.355597 7_1:-17129943 Msa1012060:CDS
ATCATAGCTGATATTTCTTC+GGG 0.360547 7_1:+17130503 None:intergenic
ATCATAGCTGATATTTCTTC+GGG 0.360547 7_1:+17131955 None:intergenic
AATCATAGCTGATATTTCTT+CGG 0.361993 7_1:+17130502 None:intergenic
AATCATAGCTGATATTTCTT+CGG 0.361993 7_1:+17131954 None:intergenic
ATCAATTCTGCAATGATAAA+GGG 0.364361 7_1:-17130593 Msa1012060:CDS
TTTGAAGTCAAGGCCACTTC+CGG 0.367503 7_1:-17131646 Msa1012060:CDS
TCCTCCGAGGTGTGTGTCTC+CGG 0.375384 7_1:+17131627 None:intergenic
AGTTGAAGCAAGAAATGCTT+TGG 0.381737 7_1:-17129241 Msa1012060:CDS
ATTCATTACCTTCAACCTTA+GGG 0.381839 7_1:+17129556 None:intergenic
AGTTGATATTATGGTTTATG+AGG 0.383249 7_1:-17129529 Msa1012060:CDS
TGCTTATGGTGCAGCTGTCC+AGG 0.386356 7_1:-17129736 Msa1012060:CDS
CCATAAGCAACAGCCTCATC+AGG 0.392319 7_1:+17129750 None:intergenic
CGATGATCGTTGTGAAATAC+AGG 0.394587 7_1:-17130547 Msa1012060:CDS
CGATGATCGTTGTGAAATAC+AGG 0.394587 7_1:-17131999 Msa1012060:CDS
TGTCTCAATTATGGTTTATG+AGG 0.395260 7_1:-17130987 Msa1012060:CDS
ACATCCCGCAGTACCAAGTT+TGG 0.398325 7_1:+17129681 None:intergenic
ATAGAAAAGCATACTTTGAT+AGG 0.399376 7_1:+17130884 None:intergenic
TAAACTTGTGTCTTCTTGAA+TGG 0.405865 7_1:+17129585 None:intergenic
GACAAAGATTTACGAAACTT+TGG 0.407586 7_1:-17131026 Msa1012060:CDS
AAGGGAGAAAGTTTGATTGA+TGG 0.409606 7_1:-17129120 Msa1012060:CDS
CCATAAGCAACAACCTCATC+AGG 0.410819 7_1:+17131202 None:intergenic
CACTAAGAATGTTCCAAACT+TGG 0.411003 7_1:-17129694 Msa1012060:CDS
AATTTCACCTGCATCTTTGG+TGG 0.413962 7_1:+17130379 None:intergenic
AATTTCACCTGCATCTTTGG+TGG 0.413962 7_1:+17131831 None:intergenic
ACTGCAGCTGCTCTTGCATA+TGG 0.416475 7_1:-17130320 Msa1012060:CDS
GGAACATGGCCTCGGGGAGC+AGG 0.424260 7_1:+17130905 None:intergenic
TTCATCTTTGATCTCGGTGG+TGG 0.426074 7_1:-17130257 Msa1012060:CDS
TTCATCTTTGATCTCGGTGG+TGG 0.426074 7_1:-17131709 Msa1012060:CDS
TTGCAATAGCTGCTTCACTT+TGG 0.431323 7_1:+17131264 None:intergenic
AAAGATGCAGGTGAAATTGC+TGG 0.431586 7_1:-17130374 Msa1012060:CDS
AAAGATGCAGGTGAAATTGC+TGG 0.431586 7_1:-17131826 Msa1012060:CDS
ACTGCGGCGGCTCTTACATA+TGG 0.438091 7_1:-17131772 Msa1012060:CDS
AGAGATTGAGAGAATGATCC+AGG 0.439899 7_1:-17129307 Msa1012060:CDS
GCAGATGATGTAGTCCTTGT+TGG 0.442427 7_1:-17129852 Msa1012060:CDS
ATTAATTCTGCAATGATAAA+GGG 0.444399 7_1:-17129138 Msa1012060:CDS
TATTACCAGTAGTTTCGTCC+TGG 0.447840 7_1:+17130831 None:intergenic
TGACATAGATGCTATATGTC+AGG 0.452956 7_1:-17131449 Msa1012060:CDS
GTAATCACTGCATTCTCAAC+AGG 0.458864 7_1:+17130437 None:intergenic
GTAATCACTGCATTCTCAAC+AGG 0.458864 7_1:+17131889 None:intergenic
ATGAAAATGGAAGATTATCA+AGG 0.459072 7_1:-17129332 Msa1012060:CDS
TAAATCTTTGTCGTCTTGAA+AGG 0.459538 7_1:+17131037 None:intergenic
AAGAGATGAAATTGAAAGAA+TGG 0.464661 7_1:-17130768 Msa1012060:CDS
GTCAATACAAGGAGATATCA+TGG 0.466811 7_1:-17131089 Msa1012060:CDS
GAGGTGTGTGTCTCCGGAAG+TGG 0.468526 7_1:+17131633 None:intergenic
TATTATACCCCTAAGGTTGA+AGG 0.468708 7_1:-17129564 Msa1012060:CDS
AAGAACAATGTTGACATTAG+TGG 0.470322 7_1:-17131553 Msa1012060:CDS
CCATAATTGAGACACTGCTT+TGG 0.473538 7_1:+17130996 None:intergenic
TCATGGATGTCGTGATTCCT+AGG 0.478455 7_1:-17131072 Msa1012060:CDS
GAACAATCTCTTTGAAGTCA+AGG 0.478470 7_1:-17131656 Msa1012060:CDS
TTATGAGTGTGGTGATTCCT+AGG 0.478815 7_1:-17129620 Msa1012060:CDS
TGAGAATCATTAAAATAAGC+AGG 0.481016 7_1:+17130410 None:intergenic
TGAGAATCATTAAAATAAGC+AGG 0.481016 7_1:+17131862 None:intergenic
AGAACTTTCTTACATCACTA+AGG 0.482902 7_1:-17131479 Msa1012060:CDS
GATGTTACACCTTTGTCTCT+AGG 0.485939 7_1:-17131115 Msa1012060:CDS
GGACCTCTTTGAAAAGTGTA+TGG 0.487372 7_1:-17129922 Msa1012060:CDS
CTTTGATAGGAACATGGCCT+CGG 0.489092 7_1:+17130897 None:intergenic
GATGTTACTCCTTTGTCACT+TGG 0.489806 7_1:-17129663 Msa1012060:CDS
CCAGGAAGCTGACAATTTCA+AGG 0.491682 7_1:-17129289 Msa1012060:CDS
GGATCTCTTTGAAAAGTGTA+TGG 0.494325 7_1:-17131374 Msa1012060:CDS
TTTGATAGGAACATGGCCTC+GGG 0.497618 7_1:+17130898 None:intergenic
TACTTTGATATAGATGCTAA+TGG 0.501593 7_1:-17129417 Msa1012060:CDS
CTGTATTTCACAACGATCAT+CGG 0.501741 7_1:+17130548 None:intergenic
CTGTATTTCACAACGATCAT+CGG 0.501741 7_1:+17132000 None:intergenic
TGATCTTCACTTTATCTACA+AGG 0.501895 7_1:+17130612 None:intergenic
GTTGATATTATGGTTTATGA+GGG 0.502673 7_1:-17129528 Msa1012060:CDS
GGAAGGCCACGGGGAGCAAG+AGG 0.503757 7_1:+17129450 None:intergenic
TTGTCTTGCAGATGCTAAGA+TGG 0.509643 7_1:-17129886 Msa1012060:CDS
TTGTCTTGCAGATGCTAAGA+TGG 0.510348 7_1:-17131338 Msa1012060:CDS
ATCATTAAAATAAGCAGGTA+CGG 0.510353 7_1:+17130415 None:intergenic
ATCATTAAAATAAGCAGGTA+CGG 0.510353 7_1:+17131867 None:intergenic
CAATGTGAAGAAAGTAATGA+AGG 0.510997 7_1:-17130660 Msa1012060:CDS
GTAAATGATGTAGTCCTTGT+TGG 0.511274 7_1:-17131304 Msa1012060:CDS
AATGGTACAGAAGTATTCCT+AGG 0.513462 7_1:+17129603 None:intergenic
AAGAACCAAGTTGACATTAG+TGG 0.515239 7_1:-17130101 Msa1012060:CDS
TGTTCCAAACTTGGTACTGC+GGG 0.515956 7_1:-17129685 Msa1012060:CDS
CAGGCTGCTTTGTTGAGTGA+AGG 0.517128 7_1:-17131169 Msa1012060:CDS
TTTGATTGATGGCAACCAGC+AGG 0.518662 7_1:-17129109 Msa1012060:CDS
TACTGTGAGAGGAAGGCCAC+GGG 0.519886 7_1:+17129440 None:intergenic
AGAAGAGCCACCAAAGATGC+AGG 0.521744 7_1:-17130386 Msa1012060:CDS
AGAAGAGCCACCAAAGATGC+AGG 0.521744 7_1:-17131838 Msa1012060:CDS
TCACTTGGTATCGATACAAA+AGG 0.522255 7_1:-17129648 Msa1012060:CDS
ACATGGCCTCGGGGAGCAGG+AGG 0.522565 7_1:+17130908 None:intergenic
CCCCAGTAAATTGTTCTCAC+AGG 0.524649 7_1:+17130949 None:intergenic
GCCTGTGAGAACAATTTACT+GGG 0.527115 7_1:-17130950 Msa1012060:CDS
AGTTAAAGCGATAAATGCAT+TGG 0.528095 7_1:-17130696 Msa1012060:CDS
ATTACCAGTAGTTTCGTCCT+GGG 0.529434 7_1:+17130832 None:intergenic
GGACGCCACTAATGTCAACT+TGG 0.531186 7_1:+17130096 None:intergenic
TCTGCCCAGGACGAAACTAC+TGG 0.546828 7_1:-17130836 Msa1012060:CDS
AAAGGAATAGAAGTGTTCCT+AGG 0.548534 7_1:+17131055 None:intergenic
ACAAGTTTATTATACCCCTA+AGG 0.550516 7_1:-17129571 Msa1012060:CDS
TATGTAAGAGCCGCCGCAGT+TGG 0.551785 7_1:+17131775 None:intergenic
GGTTGCGAAATTCTTGCGAA+AGG 0.551964 7_1:-17130058 Msa1012060:CDS
GGTTGCGAAATTCTTGCGAA+AGG 0.551964 7_1:-17131510 Msa1012060:CDS
GTTGCGAAATTCTTGCGAAA+GGG 0.558548 7_1:-17130057 Msa1012060:CDS
GTTGCGAAATTCTTGCGAAA+GGG 0.558548 7_1:-17131509 Msa1012060:CDS
ACTTTGTGAAAGAGTTTGAA+AGG 0.558605 7_1:-17130124 Msa1012060:CDS
GACATAGATGCTCTATGTCA+AGG 0.558830 7_1:-17129996 Msa1012060:CDS
GGATAATGTCTTTCAAGTCA+AGG 0.559704 7_1:-17130204 Msa1012060:CDS
AAACAAACGTATCTTCCTGC+TGG 0.562398 7_1:+17129094 None:intergenic
TTCATTACCTTCAACCTTAG+GGG 0.562836 7_1:+17129557 None:intergenic
TATAGCATCTATGTCAATTG+TGG 0.565117 7_1:+17131456 None:intergenic
GTCTCAATTATGGTTTATGA+GGG 0.565764 7_1:-17130986 Msa1012060:CDS
GACATAGATGCTATATGTCA+GGG 0.566967 7_1:-17131448 Msa1012060:CDS
GCAAGTGAGAACAACTTGCT+TGG 0.568418 7_1:-17129492 Msa1012060:CDS
CAAAGTATACTGTGAGAGGA+AGG 0.569317 7_1:+17129433 None:intergenic
AATGATGTAGTCCTTGTTGG+TGG 0.570800 7_1:-17131301 Msa1012060:CDS
GATGATGTAGTCCTTGTTGG+TGG 0.574249 7_1:-17129849 Msa1012060:CDS
AGAATTTCGCAACCTCCTCA+AGG 0.576040 7_1:+17130067 None:intergenic
AGAGGACTTTGATAACAGAA+TGG 0.578386 7_1:-17130153 Msa1012060:CDS
TAATCTTCTCTTTGTCTACA+CGG 0.580232 7_1:+17129157 None:intergenic
AAAAGGAGATATTATGAGTG+TGG 0.581319 7_1:-17129631 Msa1012060:CDS
TCTCTAGGTAAGTCAATACA+AGG 0.588769 7_1:-17131100 Msa1012060:CDS
TGAAAATGGAAGATTATCAA+GGG 0.589866 7_1:-17129331 Msa1012060:CDS
TATGCAAGAGCAGCTGCAGT+TGG 0.590893 7_1:+17130323 None:intergenic
TATACTAAATGTGTCTGCCC+AGG 0.591262 7_1:-17130849 Msa1012060:CDS
TAGAGCATCTATGTCAATTG+TGG 0.591331 7_1:+17130004 None:intergenic
CTTCACCAAGCAAAACAGCC+TGG 0.591823 7_1:+17129718 None:intergenic
GAGGTGTGTGTCTCCAGAAG+TGG 0.591955 7_1:+17130181 None:intergenic
ATATCAAAGTATACTGTGAG+AGG 0.593678 7_1:+17129429 None:intergenic
AGAATTTCGCAACCTCCTCA+GGG 0.595233 7_1:+17131519 None:intergenic
TATATTAAGCGTCTCTGCAG+TGG 0.597618 7_1:-17129394 Msa1012060:CDS
ACTTTGTGAAAGAGTTTGAG+AGG 0.598068 7_1:-17131576 Msa1012060:CDS
GTTGAGTGAAGGCATTAAGA+CGG 0.600160 7_1:-17131158 Msa1012060:CDS
ACTTCTGTTCATCAATCACA+CGG 0.600341 7_1:-17129968 Msa1012060:CDS
ACTTCTGTTCATCAATCACA+CGG 0.600341 7_1:-17131420 Msa1012060:CDS
CTTCTAGGATTCCTAAAGTG+AGG 0.600875 7_1:-17129824 Msa1012060:CDS
TCAATTCTGCAATGATAAAG+GGG 0.603500 7_1:-17130592 Msa1012060:CDS
CGTTGTGAAATACAGGGGCA+AGG 0.607751 7_1:-17130540 Msa1012060:CDS
CGTTGTGAAATACAGGGGCA+AGG 0.607751 7_1:-17131992 Msa1012060:CDS
AGAGGACTTTGATAACAGAA+TGG 0.612914 7_1:-17131605 Msa1012060:CDS
AGACACACACCTCGGAGGAG+AGG 0.617785 7_1:-17131623 Msa1012060:CDS
AGACACACACCTCGGAGGAG+AGG 0.619985 7_1:-17130171 Msa1012060:CDS
CATAAGCAACAGCCTCATCA+GGG 0.634330 7_1:+17129751 None:intergenic
GCTATGAATAAGATCGACAA+AGG 0.637168 7_1:-17129030 Msa1012060:CDS
GTGACCCAAAAGCCCTGAGG+AGG 0.638127 7_1:-17131531 Msa1012060:CDS
CAAGAGCATTAACCCTGATG+AGG 0.639574 7_1:-17129763 Msa1012060:CDS
AAAGTTCCTCTTGCTCCCCG+TGG 0.642810 7_1:-17129456 Msa1012060:CDS
GGACTTTGATAACAGAATGG+TGG 0.643649 7_1:-17130150 Msa1012060:CDS
GTATCGATACCAAGTGACAA+AGG 0.643846 7_1:+17129654 None:intergenic
AGCATACTTTGATAGGAACA+TGG 0.643949 7_1:+17130891 None:intergenic
ATACTGTGAGAGGAAGGCCA+CGG 0.644258 7_1:+17129439 None:intergenic
ATTGACTTACCTAGAGACAA+AGG 0.653719 7_1:+17131106 None:intergenic
TCCTAGAAGAACCACCAACA+AGG 0.656071 7_1:+17129838 None:intergenic
TCCTAGAAGAACCACCAACA+AGG 0.656071 7_1:+17131290 None:intergenic
CATAAGCAACAACCTCATCA+GGG 0.656855 7_1:+17131203 None:intergenic
ATGTTCCAAACTTGGTACTG+CGG 0.659079 7_1:-17129686 Msa1012060:CDS
TCAATTCCTCCTGCTCCCCG+AGG 0.660669 7_1:-17130914 Msa1012060:CDS
ACTTCCGGAGACACACACCT+CGG 0.661634 7_1:-17131631 Msa1012060:CDS
GCGTCCCAAAAGCCTTGAGG+AGG 0.663602 7_1:-17130079 Msa1012060:CDS
GTGGCGTCCCAAAAGCCTTG+AGG 0.664119 7_1:-17130082 Msa1012060:CDS
GATGATCGTTGTGAAATACA+GGG 0.665247 7_1:-17130546 Msa1012060:CDS
GATGATCGTTGTGAAATACA+GGG 0.665247 7_1:-17131998 Msa1012060:CDS
ACTTCTGGAGACACACACCT+CGG 0.666959 7_1:-17130179 Msa1012060:CDS
AATCAATGAACCAACTGCGG+CGG 0.672754 7_1:-17131785 Msa1012060:CDS
CTTCTGTTCATCAATCACAC+GGG 0.674858 7_1:-17129967 Msa1012060:CDS
CTTCTGTTCATCAATCACAC+GGG 0.674858 7_1:-17131419 Msa1012060:CDS
CAAGAGCATCAACCCTGATG+AGG 0.676687 7_1:-17131215 Msa1012060:CDS
CCTGTGAGAACAATTTACTG+GGG 0.686202 7_1:-17130949 Msa1012060:CDS
GATAATCAATGAACCAACTG+CGG 0.686757 7_1:-17131788 Msa1012060:CDS
TATCAAAGTCCTCTCCTCCG+AGG 0.688667 7_1:+17130162 None:intergenic
TATCAAAGTCCTCTCCTCCG+AGG 0.688667 7_1:+17131614 None:intergenic
TTGATAGGAACATGGCCTCG+GGG 0.708823 7_1:+17130899 None:intergenic
ATGATCGTTGTGAAATACAG+GGG 0.709998 7_1:-17130545 Msa1012060:CDS
ATGATCGTTGTGAAATACAG+GGG 0.709998 7_1:-17131997 Msa1012060:CDS
TCTGGAGACACACACCTCGG+AGG 0.712848 7_1:-17130176 Msa1012060:CDS
TCCGGAGACACACACCTCGG+AGG 0.716077 7_1:-17131628 Msa1012060:CDS
TCTGCAGTGGAAGAAACCAG+TGG 0.733951 7_1:-17129381 Msa1012060:CDS
GTGGTGACCCAAAAGCCCTG+AGG 0.760267 7_1:-17131534 Msa1012060:CDS
ACTGTGAGAGGAAGGCCACG+GGG 0.773300 7_1:+17129441 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACAATAACAAATGAAAA+TGG - chr7_1:17130193-17130212 Msa1012060:CDS 15.0%
!!! TGAATTTTTAGTTGATATTA+TGG - chr7_1:17131455-17131474 Msa1012060:CDS 15.0%
!! ATTACAATAACTAATGAAAA+TGG - chr7_1:17131648-17131667 Msa1012060:CDS 15.0%
!!! AATATTTTCATCTTTGATCT+CGG - chr7_1:17129278-17129297 Msa1012060:CDS 20.0%
!!! AATATTTTCATCTTTGATCT+CGG - chr7_1:17129278-17129297 Msa1012060:CDS 20.0%
!! AGAACTTTCTTATATCAATA+AGG - chr7_1:17130966-17130985 Msa1012060:CDS 20.0%
!! ATTAATTCTGCAATGATAAA+GGG - chr7_1:17131855-17131874 Msa1012060:CDS 20.0%
!!! TGTTTTTGTAAACTTTTTGA+AGG - chr7_1:17131917-17131936 Msa1012060:CDS 20.0%
! AATCATAGCTGATATTTCTT+CGG + chr7_1:17129042-17129061 None:intergenic 25.0%
! ATCATTAAAATAAGCAGGTA+CGG + chr7_1:17129129-17129148 None:intergenic 25.0%
! TGAGAATCATTAAAATAAGC+AGG + chr7_1:17129134-17129153 None:intergenic 25.0%
!! ATAGAAAAGCATACTTTGAT+AGG + chr7_1:17130112-17130131 None:intergenic 25.0%
!! TATCAAAGTATGCTTTTCTA+TGG - chr7_1:17130111-17130130 Msa1012060:CDS 25.0%
! AAGAGATGAAATTGAAAGAA+TGG - chr7_1:17130225-17130244 Msa1012060:CDS 25.0%
! ATCAATTCTGCAATGATAAA+GGG - chr7_1:17130400-17130419 Msa1012060:CDS 25.0%
! AATCATAGCTGATATTTCTT+CGG + chr7_1:17129042-17129061 None:intergenic 25.0%
! ATCATTAAAATAAGCAGGTA+CGG + chr7_1:17129129-17129148 None:intergenic 25.0%
! TGAGAATCATTAAAATAAGC+AGG + chr7_1:17129134-17129153 None:intergenic 25.0%
!!! TTATTACAGGAGTTTTTCAA+AGG - chr7_1:17131195-17131214 Msa1012060:CDS 25.0%
!!! TATTACAGGAGTTTTTCAAA+GGG - chr7_1:17131196-17131215 Msa1012060:CDS 25.0%
!! AGTTGATATTATGGTTTATG+AGG - chr7_1:17131464-17131483 Msa1012060:CDS 25.0%
! GTTGATATTATGGTTTATGA+GGG - chr7_1:17131465-17131484 Msa1012060:CDS 25.0%
! TACTTTGATATAGATGCTAA+TGG - chr7_1:17131576-17131595 Msa1012060:CDS 25.0%
!!! AATTTCATTTTTATTGCCAC+TGG + chr7_1:17131631-17131650 None:intergenic 25.0%
! ATGAAAATGGAAGATTATCA+AGG - chr7_1:17131661-17131680 Msa1012060:CDS 25.0%
! TGAAAATGGAAGATTATCAA+GGG - chr7_1:17131662-17131681 Msa1012060:CDS 25.0%
! GATTAATTCTGCAATGATAA+AGG - chr7_1:17131854-17131873 Msa1012060:CDS 25.0%
ATCATAGCTGATATTTCTTC+GGG + chr7_1:17129041-17129060 None:intergenic 30.0%
AAGAACAATGTTGACATTAG+TGG - chr7_1:17129440-17129459 Msa1012060:CDS 30.0%
AGAACTTTCTTACATCACTA+AGG - chr7_1:17129514-17129533 Msa1012060:CDS 30.0%
TATAGCATCTATGTCAATTG+TGG + chr7_1:17129540-17129559 None:intergenic 30.0%
TAAGTTTGAGCAACTGAATA+TGG - chr7_1:17129598-17129617 Msa1012060:CDS 30.0%
!!! CTATTGCAAGACTTTTTCAA+GGG - chr7_1:17129743-17129762 Msa1012060:CDS 30.0%
!!! TATTGCAAGACTTTTTCAAG+GGG - chr7_1:17129744-17129763 Msa1012060:CDS 30.0%
TAAATCTTTGTCGTCTTGAA+AGG + chr7_1:17129959-17129978 None:intergenic 30.0%
GACAAAGATTTACGAAACTT+TGG - chr7_1:17129967-17129986 Msa1012060:CDS 30.0%
TGTCTCAATTATGGTTTATG+AGG - chr7_1:17130006-17130025 Msa1012060:CDS 30.0%
GTCTCAATTATGGTTTATGA+GGG - chr7_1:17130007-17130026 Msa1012060:CDS 30.0%
AGTTAAAGCGATAAATGCAT+TGG - chr7_1:17130297-17130316 Msa1012060:CDS 30.0%
CAATGTGAAGAAAGTAATGA+AGG - chr7_1:17130333-17130352 Msa1012060:CDS 30.0%
TGATCTTCACTTTATCTACA+AGG + chr7_1:17130384-17130403 None:intergenic 30.0%
GATCAATTCTGCAATGATAA+AGG - chr7_1:17130399-17130418 Msa1012060:CDS 30.0%
TCAATTCTGCAATGATAAAG+GGG - chr7_1:17130401-17130420 Msa1012060:CDS 30.0%
ATCATAGCTGATATTTCTTC+GGG + chr7_1:17129041-17129060 None:intergenic 30.0%
TGTTTCTCTTCTCACAATTA+AGG - chr7_1:17129316-17129335 Msa1012060:CDS 30.0%
ACTTTGTGAAAGAGTTTGAA+AGG - chr7_1:17130869-17130888 Msa1012060:CDS 30.0%
TAAGTTTGAGCAACTGAATA+TGG - chr7_1:17129598-17129617 Msa1012060:CDS 30.0%
AAAAGGAGATATTATGAGTG+TGG - chr7_1:17131362-17131381 Msa1012060:CDS 30.0%
TAAACTTGTGTCTTCTTGAA+TGG + chr7_1:17131411-17131430 None:intergenic 30.0%
ACAAGTTTATTATACCCCTA+AGG - chr7_1:17131422-17131441 Msa1012060:CDS 30.0%
ATTCATTACCTTCAACCTTA+GGG + chr7_1:17131440-17131459 None:intergenic 30.0%
AATTCATTACCTTCAACCTT+AGG + chr7_1:17131441-17131460 None:intergenic 30.0%
ATATCAAAGTATACTGTGAG+AGG + chr7_1:17131567-17131586 None:intergenic 30.0%
TAATCTTCTCTTTGTCTACA+CGG + chr7_1:17131839-17131858 None:intergenic 30.0%
ATGATCGTTGTGAAATACAG+GGG - chr7_1:17128996-17129015 Msa1012060:CDS 35.0%
!!! AGAGATTGCAGAAGCATTTT+TGG - chr7_1:17129076-17129095 Msa1012060:CDS 35.0%
GATAATCAATGAACCAACTG+CGG - chr7_1:17129205-17129224 Msa1012060:CDS 35.0%
! ATTTTCATCTTTGATCTCGG+TGG - chr7_1:17129281-17129300 Msa1012060:CDS 35.0%
!! GAACAATCTCTTTGAAGTCA+AGG - chr7_1:17129337-17129356 Msa1012060:CDS 35.0%
! AGAGGACTTTGATAACAGAA+TGG - chr7_1:17129388-17129407 Msa1012060:CDS 35.0%
ACTTTGTGAAAGAGTTTGAG+AGG - chr7_1:17129417-17129436 Msa1012060:CDS 35.0%
TGACATAGATGCTATATGTC+AGG - chr7_1:17129544-17129563 Msa1012060:CDS 35.0%
GACATAGATGCTATATGTCA+GGG - chr7_1:17129545-17129564 Msa1012060:CDS 35.0%
ACTTCTGTTCATCAATCACA+CGG - chr7_1:17129573-17129592 Msa1012060:CDS 35.0%
! GGATCTCTTTGAAAAGTGTA+TGG - chr7_1:17129619-17129638 Msa1012060:CDS 35.0%
GTAAATGATGTAGTCCTTGT+TGG - chr7_1:17129689-17129708 Msa1012060:CDS 35.0%
!!! GCTATTGCAAGACTTTTTCA+AGG - chr7_1:17129742-17129761 Msa1012060:CDS 35.0%
! ATTGACTTACCTAGAGACAA+AGG + chr7_1:17129890-17129909 None:intergenic 35.0%
TCTCTAGGTAAGTCAATACA+AGG - chr7_1:17129893-17129912 Msa1012060:CDS 35.0%
GTCAATACAAGGAGATATCA+TGG - chr7_1:17129904-17129923 Msa1012060:CDS 35.0%
!! AAAGGAATAGAAGTGTTCCT+AGG + chr7_1:17129941-17129960 None:intergenic 35.0%
AGCATACTTTGATAGGAACA+TGG + chr7_1:17130105-17130124 None:intergenic 35.0%
CTGTATTTCACAACGATCAT+CGG + chr7_1:17128996-17129015 None:intergenic 35.0%
GATGATCGTTGTGAAATACA+GGG - chr7_1:17130447-17130466 Msa1012060:CDS 35.0%
ATGATCGTTGTGAAATACAG+GGG - chr7_1:17128996-17129015 Msa1012060:CDS 35.0%
!!! AGAGATTGCAGAAGCATTTT+TGG - chr7_1:17129076-17129095 Msa1012060:CDS 35.0%
! ATTTTCATCTTTGATCTCGG+TGG - chr7_1:17129281-17129300 Msa1012060:CDS 35.0%
! GGATAATGTCTTTCAAGTCA+AGG - chr7_1:17130789-17130808 Msa1012060:CDS 35.0%
! AGAGGACTTTGATAACAGAA+TGG - chr7_1:17129388-17129407 Msa1012060:CDS 35.0%
! AAGAACCAAGTTGACATTAG+TGG - chr7_1:17130892-17130911 Msa1012060:CDS 35.0%
! TAGAGCATCTATGTCAATTG+TGG + chr7_1:17130992-17131011 None:intergenic 35.0%
ACTTCTGTTCATCAATCACA+CGG - chr7_1:17129573-17129592 Msa1012060:CDS 35.0%
! TCTCCATACACTTTTCAAAG+AGG + chr7_1:17129625-17129644 None:intergenic 35.0%
TGTAATAACTGCCTCACTTT+AGG + chr7_1:17131183-17131202 None:intergenic 35.0%
TAAAGTGAGGCAGTTATTAC+AGG - chr7_1:17131182-17131201 Msa1012060:CDS 35.0%
CACTAAGAATGTTCCAAACT+TGG - chr7_1:17131299-17131318 Msa1012060:CDS 35.0%
!! TCACTTGGTATCGATACAAA+AGG - chr7_1:17131345-17131364 Msa1012060:CDS 35.0%
!! AATGGTACAGAAGTATTCCT+AGG + chr7_1:17131393-17131412 None:intergenic 35.0%
TATTATACCCCTAAGGTTGA+AGG - chr7_1:17131429-17131448 Msa1012060:CDS 35.0%
TTCATTACCTTCAACCTTAG+GGG + chr7_1:17131439-17131458 None:intergenic 35.0%
AGTTGAAGCAAGAAATGCTT+TGG - chr7_1:17131752-17131771 Msa1012060:CDS 35.0%
AAGGGAGAAAGTTTGATTGA+TGG - chr7_1:17131873-17131892 Msa1012060:CDS 35.0%
!! CTTTTTGAAGGAGCTTAAGA+TGG - chr7_1:17131929-17131948 Msa1012060:CDS 35.0%
GCTATGAATAAGATCGACAA+AGG - chr7_1:17131963-17131982 Msa1012060:CDS 35.0%
GTAATCACTGCATTCTCAAC+AGG + chr7_1:17129107-17129126 None:intergenic 40.0%
AATTTCACCTGCATCTTTGG+TGG + chr7_1:17129165-17129184 None:intergenic 40.0%
AGCAATTTCACCTGCATCTT+TGG + chr7_1:17129168-17129187 None:intergenic 40.0%
AAAGATGCAGGTGAAATTGC+TGG - chr7_1:17129167-17129186 Msa1012060:CDS 40.0%
GTTGCGAAATTCTTGCGAAA+GGG - chr7_1:17129484-17129503 Msa1012060:CDS 40.0%
CTTCTGTTCATCAATCACAC+GGG - chr7_1:17129574-17129593 Msa1012060:CDS 40.0%
TTGTCTTGCAGATGCTAAGA+TGG - chr7_1:17129655-17129674 Msa1012060:CDS 40.0%
AATGATGTAGTCCTTGTTGG+TGG - chr7_1:17129692-17129711 Msa1012060:CDS 40.0%
TGCAATAGCTGCTTCACTTT+GGG + chr7_1:17129731-17129750 None:intergenic 40.0%
TTGCAATAGCTGCTTCACTT+TGG + chr7_1:17129732-17129751 None:intergenic 40.0%
CATAAGCAACAACCTCATCA+GGG + chr7_1:17129793-17129812 None:intergenic 40.0%
!! GTTGAGTGAAGGCATTAAGA+CGG - chr7_1:17129835-17129854 Msa1012060:CDS 40.0%
! ACATCTTGAAGCGTCAGATT+TGG + chr7_1:17129863-17129882 None:intergenic 40.0%
GATGTTACACCTTTGTCTCT+AGG - chr7_1:17129878-17129897 Msa1012060:CDS 40.0%
CCATAATTGAGACACTGCTT+TGG + chr7_1:17130000-17130019 None:intergenic 40.0%
CCAAAGCAGTGTCTCAATTA+TGG - chr7_1:17129997-17130016 Msa1012060:CDS 40.0%
AGCCTGTGAGAACAATTTAC+TGG - chr7_1:17130042-17130061 Msa1012060:CDS 40.0%
GCCTGTGAGAACAATTTACT+GGG - chr7_1:17130043-17130062 Msa1012060:CDS 40.0%
CCTGTGAGAACAATTTACTG+GGG - chr7_1:17130044-17130063 Msa1012060:CDS 40.0%
TATACTAAATGTGTCTGCCC+AGG - chr7_1:17130144-17130163 Msa1012060:CDS 40.0%
ATTACCAGTAGTTTCGTCCT+GGG + chr7_1:17130164-17130183 None:intergenic 40.0%
TATTACCAGTAGTTTCGTCC+TGG + chr7_1:17130165-17130184 None:intergenic 40.0%
CGATGATCGTTGTGAAATAC+AGG - chr7_1:17130446-17130465 Msa1012060:CDS 40.0%
GTAATCACTGCATTCTCAAC+AGG + chr7_1:17129107-17129126 None:intergenic 40.0%
AATTTCACCTGCATCTTTGG+TGG + chr7_1:17129165-17129184 None:intergenic 40.0%
AGCAATTTCACCTGCATCTT+TGG + chr7_1:17129168-17129187 None:intergenic 40.0%
AAAGATGCAGGTGAAATTGC+TGG - chr7_1:17129167-17129186 Msa1012060:CDS 40.0%
! GGACTTTGATAACAGAATGG+TGG - chr7_1:17129391-17129410 Msa1012060:CDS 40.0%
GTTGCGAAATTCTTGCGAAA+GGG - chr7_1:17129484-17129503 Msa1012060:CDS 40.0%
GACATAGATGCTCTATGTCA+AGG - chr7_1:17130997-17131016 Msa1012060:CDS 40.0%
CTTCTGTTCATCAATCACAC+GGG - chr7_1:17129574-17129593 Msa1012060:CDS 40.0%
! GGACCTCTTTGAAAAGTGTA+TGG - chr7_1:17131071-17131090 Msa1012060:CDS 40.0%
TTGTCTTGCAGATGCTAAGA+TGG - chr7_1:17129655-17129674 Msa1012060:CDS 40.0%
!! CTTCTAGGATTCCTAAAGTG+AGG - chr7_1:17131169-17131188 Msa1012060:CDS 40.0%
!! ACAGGAGTTTTTCAAAGGGA+AGG - chr7_1:17131200-17131219 Msa1012060:CDS 40.0%
ATGTTCCAAACTTGGTACTG+CGG - chr7_1:17131307-17131326 Msa1012060:CDS 40.0%
GATGTTACTCCTTTGTCACT+TGG - chr7_1:17131330-17131349 Msa1012060:CDS 40.0%
! GTATCGATACCAAGTGACAA+AGG + chr7_1:17131342-17131361 None:intergenic 40.0%
TTATGAGTGTGGTGATTCCT+AGG - chr7_1:17131373-17131392 Msa1012060:CDS 40.0%
CAAAGTATACTGTGAGAGGA+AGG + chr7_1:17131563-17131582 None:intergenic 40.0%
TATATTAAGCGTCTCTGCAG+TGG - chr7_1:17131599-17131618 Msa1012060:CDS 40.0%
AGAGATTGAGAGAATGATCC+AGG - chr7_1:17131686-17131705 Msa1012060:CDS 40.0%
AAACAAACGTATCTTCCTGC+TGG + chr7_1:17131902-17131921 None:intergenic 40.0%
AATCAATGAACCAACTGCGG+CGG - chr7_1:17129208-17129227 Msa1012060:CDS 45.0%
TTCATCTTTGATCTCGGTGG+TGG - chr7_1:17129284-17129303 Msa1012060:CDS 45.0%
! TTTGAAGTCAAGGCCACTTC+CGG - chr7_1:17129347-17129366 Msa1012060:CDS 45.0%
AGAATTTCGCAACCTCCTCA+GGG + chr7_1:17129477-17129496 None:intergenic 45.0%
AAGAATTTCGCAACCTCCTC+AGG + chr7_1:17129478-17129497 None:intergenic 45.0%
GGTTGCGAAATTCTTGCGAA+AGG - chr7_1:17129483-17129502 Msa1012060:CDS 45.0%
!! TCCTTGTTGGTGGTTCTTCT+AGG - chr7_1:17129702-17129721 Msa1012060:CDS 45.0%
TCCTAGAAGAACCACCAACA+AGG + chr7_1:17129706-17129725 None:intergenic 45.0%
!!! GCAAGACTTTTTCAAGGGGA+AGG - chr7_1:17129748-17129767 Msa1012060:CDS 45.0%
CCATAAGCAACAACCTCATC+AGG + chr7_1:17129794-17129813 None:intergenic 45.0%
! CCTGATGAGGTTGTTGCTTA+TGG - chr7_1:17129791-17129810 Msa1012060:CDS 45.0%
TCATGGATGTCGTGATTCCT+AGG - chr7_1:17129921-17129940 Msa1012060:CDS 45.0%
CCCCAGTAAATTGTTCTCAC+AGG + chr7_1:17130047-17130066 None:intergenic 45.0%
TTTGATAGGAACATGGCCTC+GGG + chr7_1:17130098-17130117 None:intergenic 45.0%
CTTTGATAGGAACATGGCCT+CGG + chr7_1:17130099-17130118 None:intergenic 45.0%
TTCATCTTTGATCTCGGTGG+TGG - chr7_1:17129284-17129303 Msa1012060:CDS 45.0%
! TTTCAAGTCAAGGCCACTTC+TGG - chr7_1:17130799-17130818 Msa1012060:CDS 45.0%
AGAATTTCGCAACCTCCTCA+AGG + chr7_1:17129477-17129496 None:intergenic 45.0%
GGTTGCGAAATTCTTGCGAA+AGG - chr7_1:17129483-17129502 Msa1012060:CDS 45.0%
GCAGATGATGTAGTCCTTGT+TGG - chr7_1:17131141-17131160 Msa1012060:CDS 45.0%
GATGATGTAGTCCTTGTTGG+TGG - chr7_1:17131144-17131163 Msa1012060:CDS 45.0%
!! TCCTTGTTGGTGGTTCTTCT+AGG - chr7_1:17129702-17129721 Msa1012060:CDS 45.0%
TCCTAGAAGAACCACCAACA+AGG + chr7_1:17129706-17129725 None:intergenic 45.0%
!! CAAGAGCATTAACCCTGATG+AGG - chr7_1:17131230-17131249 Msa1012060:CDS 45.0%
CATAAGCAACAGCCTCATCA+GGG + chr7_1:17131245-17131264 None:intergenic 45.0%
TGTTCCAAACTTGGTACTGC+GGG - chr7_1:17131308-17131327 Msa1012060:CDS 45.0%
! GCAAGTGAGAACAACTTGCT+TGG - chr7_1:17131501-17131520 Msa1012060:CDS 45.0%
CCTTGAAATTGTCAGCTTCC+TGG + chr7_1:17131707-17131726 None:intergenic 45.0%
CCAGGAAGCTGACAATTTCA+AGG - chr7_1:17131704-17131723 Msa1012060:CDS 45.0%
! TTTGATTGATGGCAACCAGC+AGG - chr7_1:17131884-17131903 Msa1012060:CDS 45.0%
CGTTGTGAAATACAGGGGCA+AGG - chr7_1:17129001-17129020 Msa1012060:CDS 50.0%
AGAAGAGCCACCAAAGATGC+AGG - chr7_1:17129155-17129174 Msa1012060:CDS 50.0%
TATCAAAGTCCTCTCCTCCG+AGG + chr7_1:17129382-17129401 None:intergenic 50.0%
!! CAAGAGCATCAACCCTGATG+AGG - chr7_1:17129778-17129797 Msa1012060:CDS 50.0%
TGCTTATGGTGCAGCTGTTC+AGG - chr7_1:17129805-17129824 Msa1012060:CDS 50.0%
! CAGGCTGCTTTGTTGAGTGA+AGG - chr7_1:17129824-17129843 Msa1012060:CDS 50.0%
TTGATAGGAACATGGCCTCG+GGG + chr7_1:17130097-17130116 None:intergenic 50.0%
CGTTGTGAAATACAGGGGCA+AGG - chr7_1:17129001-17129020 Msa1012060:CDS 50.0%
AGAAGAGCCACCAAAGATGC+AGG - chr7_1:17129155-17129174 Msa1012060:CDS 50.0%
TATGCAAGAGCAGCTGCAGT+TGG + chr7_1:17130673-17130692 None:intergenic 50.0%
ACTGCAGCTGCTCTTGCATA+TGG - chr7_1:17130673-17130692 Msa1012060:CDS 50.0%
! ACTTCTGGAGACACACACCT+CGG - chr7_1:17130814-17130833 Msa1012060:CDS 50.0%
TATCAAAGTCCTCTCCTCCG+AGG + chr7_1:17129382-17129401 None:intergenic 50.0%
GGACGCCACTAATGTCAACT+TGG + chr7_1:17130900-17130919 None:intergenic 50.0%
! GCAACCTCCTCAAGGCTTTT+GGG + chr7_1:17130921-17130940 None:intergenic 50.0%
CCATAAGCAACAGCCTCATC+AGG + chr7_1:17131246-17131265 None:intergenic 50.0%
! CCTGATGAGGCTGTTGCTTA+TGG - chr7_1:17131243-17131262 Msa1012060:CDS 50.0%
CTTCACCAAGCAAAACAGCC+TGG + chr7_1:17131278-17131297 None:intergenic 50.0%
ACATCCCGCAGTACCAAGTT+TGG + chr7_1:17131315-17131334 None:intergenic 50.0%
ATACTGTGAGAGGAAGGCCA+CGG + chr7_1:17131557-17131576 None:intergenic 50.0%
TCTGCAGTGGAAGAAACCAG+TGG - chr7_1:17131612-17131631 Msa1012060:CDS 50.0%
TATGTAAGAGCCGCCGCAGT+TGG + chr7_1:17129221-17129240 None:intergenic 55.0%
ACTGCGGCGGCTCTTACATA+TGG - chr7_1:17129221-17129240 Msa1012060:CDS 55.0%
ACTTCCGGAGACACACACCT+CGG - chr7_1:17129362-17129381 Msa1012060:CDS 55.0%
! GCAACCTCCTCAGGGCTTTT+GGG + chr7_1:17129469-17129488 None:intergenic 55.0%
TCTGCCCAGGACGAAACTAC+TGG - chr7_1:17130157-17130176 Msa1012060:CDS 55.0%
GAGGTGTGTGTCTCCAGAAG+TGG + chr7_1:17130815-17130834 None:intergenic 55.0%
! CGCAACCTCCTCAAGGCTTT+TGG + chr7_1:17130922-17130941 None:intergenic 55.0%
TGCTTATGGTGCAGCTGTCC+AGG - chr7_1:17131257-17131276 Msa1012060:CDS 55.0%
!! GCTGTCCAGGCTGTTTTGCT+TGG - chr7_1:17131270-17131289 Msa1012060:CDS 55.0%
AAAGTTCCTCTTGCTCCCCG+TGG - chr7_1:17131537-17131556 Msa1012060:CDS 55.0%
TACTGTGAGAGGAAGGCCAC+GGG + chr7_1:17131556-17131575 None:intergenic 55.0%
GAGGTGTGTGTCTCCGGAAG+TGG + chr7_1:17129363-17129382 None:intergenic 60.0%
TCCTCCGAGGTGTGTGTCTC+CGG + chr7_1:17129369-17129388 None:intergenic 60.0%
AGACACACACCTCGGAGGAG+AGG - chr7_1:17129370-17129389 Msa1012060:CDS 60.0%
GTGGTGACCCAAAAGCCCTG+AGG - chr7_1:17129459-17129478 Msa1012060:CDS 60.0%
GTGACCCAAAAGCCCTGAGG+AGG - chr7_1:17129462-17129481 Msa1012060:CDS 60.0%
! CGCAACCTCCTCAGGGCTTT+TGG + chr7_1:17129470-17129489 None:intergenic 60.0%
TCAATTCCTCCTGCTCCCCG+AGG - chr7_1:17130079-17130098 Msa1012060:CDS 60.0%
TCTGGAGACACACACCTCGG+AGG - chr7_1:17130817-17130836 Msa1012060:CDS 60.0%
AGACACACACCTCGGAGGAG+AGG - chr7_1:17129370-17129389 Msa1012060:CDS 60.0%
GTGGCGTCCCAAAAGCCTTG+AGG - chr7_1:17130911-17130930 Msa1012060:CDS 60.0%
GCGTCCCAAAAGCCTTGAGG+AGG - chr7_1:17130914-17130933 Msa1012060:CDS 60.0%
ACTGTGAGAGGAAGGCCACG+GGG + chr7_1:17131555-17131574 None:intergenic 60.0%
TCCGGAGACACACACCTCGG+AGG - chr7_1:17129365-17129384 Msa1012060:CDS 65.0%
ACATGGCCTCGGGGAGCAGG+AGG + chr7_1:17130088-17130107 None:intergenic 70.0%
GGAACATGGCCTCGGGGAGC+AGG + chr7_1:17130091-17130110 None:intergenic 70.0%
GGAAGGCCACGGGGAGCAAG+AGG + chr7_1:17131546-17131565 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 17128996 17132019 17128996 ID=Msa1012060;Name=Msa1012060
chr7_1 mRNA 17128996 17132019 17128996 ID=Msa1012060-mRNA-1;Parent=Msa1012060;Name=Msa1012060-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|1007
chr7_1 exon 17128996 17132019 17128996 ID=Msa1012060-mRNA-1:exon:4303;Parent=Msa1012060-mRNA-1
chr7_1 CDS 17128996 17132019 17128996 ID=Msa1012060-mRNA-1:cds;Parent=Msa1012060-mRNA-1
Gene Sequence

>Msa1012060

ATGATCGTTGTGAAATACAGGGGCAAGGAAAAGCATCTTGTTCCCGAAGAAATATCAGCTATGATTCTCACACAGATGCGAGAGATTGCAGAAGCATTTTTGGAGTCACCTGTTGAGAATGCAGTGATTACCGTACCTGCTTATTTTAATGATTCTCAAAGAAGAGCCACCAAAGATGCAGGTGAAATTGCTGGTCTTAATGTAATGCAGATAATCAATGAACCAACTGCGGCGGCTCTTACATATGGACTTCAAAAGAGATCTAATTGTGTTGAAGAGAGAAATATTTTCATCTTTGATCTCGGTGGTGGAACTTTTGATGTTTCTCTTCTCACAATTAAGAACAATCTCTTTGAAGTCAAGGCCACTTCCGGAGACACACACCTCGGAGGAGAGGACTTTGATAACAGAATGGTGAAACACTTTGTGAAAGAGTTTGAGAGGAAGAACAATGTTGACATTAGTGGTGACCCAAAAGCCCTGAGGAGGTTGCGAAATTCTTGCGAAAGGGCAAAAAGAGAACTTTCTTACATCACTAAGGCCACAATTGACATAGATGCTATATGTCAGGGCATTGACTTCTGTTCATCAATCACACGGGCTAAGTTTGAGCAACTGAATATGGATCTCTTTGAAAAGTGTATGGAGATTGTTAAGAGTTGTCTTGCAGATGCTAAGATGGATAAGAGTAGTGTAAATGATGTAGTCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGAAGCAGCTATTGCAAGACTTTTTCAAGGGGAAGGAATTGTGCAAGAGCATCAACCCTGATGAGGTTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGTTGAGTGAAGGCATTAAGACGGTTCCAAATCTGACGCTTCAAGATGTTACACCTTTGTCTCTAGGTAAGTCAATACAAGGAGATATCATGGATGTCGTGATTCCTAGGAACACTTCTATTCCTTTCAAGACGACAAAGATTTACGAAACTTTGGAAGATAACCAAAGCAGTGTCTCAATTATGGTTTATGAGGGAGAGAGAATAAAAGCCTGTGAGAACAATTTACTGGGGTTTTTTAGTCTCTCAATTCCTCCTGCTCCCCGAGGCCATGTTCCTATCAAAGTATGCTTTTCTATGGATGCTGATTGTATACTAAATGTGTCTGCCCAGGACGAAACTACTGGTAATAAGAAAGATATTACAATAACAAATGAAAATGGAAGACTGTCAAGAGATGAAATTGAAAGAATGGTTCAAGAAGCTGAAAATTTTAAATCTGAAGATATGAAGTTCAAAAAGAAAGTTAAAGCGATAAATGCATTGGACGATTATCTTTACAATGTGAAGAAAGTAATGAAGGATGATAGTGTTGCTTCAAAACTTAACCTTGTAGATAAAGTGAAGATCAATTCTGCAATGATAAAGGGGAAAAGTTTGATTGATGACAAACCGATGATCGTTGTGAAATACAGGGGCAAGGAAAAGCATCTTGTTCCCGAAGAAATATCAGCTATGATTCTCACACAGATGCGAGAGATTGCAGAAGCATTTTTGGAGTCACCTGTTGAGAATGCAGTGATTACCGTACCTGCTTATTTTAATGATTCTCAAAGAAGAGCCACCAAAGATGCAGGTGAAATTGCTGGTCTTAATGTAATGCAGATAATCAATGAACCAACTGCAGCTGCTCTTGCATATGGACTTCAAAAGAGATCTAATTGTGTTGAAGAGAGAAATATTTTCATCTTTGATCTCGGTGGTGGAACTTTTGATGTTTCTCTTCTCACAATTAAGGATAATGTCTTTCAAGTCAAGGCCACTTCTGGAGACACACACCTCGGAGGAGAGGACTTTGATAACAGAATGGTGGAACACTTTGTGAAAGAGTTTGAAAGGAAGAACCAAGTTGACATTAGTGGCGTCCCAAAAGCCTTGAGGAGGTTGCGAAATTCTTGCGAAAGGGCAAAAAGAGAACTTTCTTATATCAATAAGGCCACAATTGACATAGATGCTCTATGTCAAGGAATTGACTTCTGTTCATCAATCACACGGGCTAAGTTTGAGCAACTGAATATGGACCTCTTTGAAAAGTGTATGGAGATTGTTAAGAGTTGTCTTGCAGATGCTAAGATGGACAAGAGTTGTGCAGATGATGTAGTCCTTGTTGGTGGTTCTTCTAGGATTCCTAAAGTGAGGCAGTTATTACAGGAGTTTTTCAAAGGGAAGGAATTATGCAAGAGCATTAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGTTTTGCTTGGTGAAGACACTAAGAATGTTCCAAACTTGGTACTGCGGGATGTTACTCCTTTGTCACTTGGTATCGATACAAAAGGAGATATTATGAGTGTGGTGATTCCTAGGAATACTTCTGTACCATTCAAGAAGACACAAGTTTATTATACCCCTAAGGTTGAAGGTAATGAATTTTTAGTTGATATTATGGTTTATGAGGGTGAGAGAATTGTTGCAAGTGAGAACAACTTGCTTGGTTTGTTTGATCTCAAAGTTCCTCTTGCTCCCCGTGGCCTTCCTCTCACAGTATACTTTGATATAGATGCTAATGGTATATTAAGCGTCTCTGCAGTGGAAGAAACCAGTGGCAATAAAAATGAAATTACAATAACTAATGAAAATGGAAGATTATCAAGGGAAGAGATTGAGAGAATGATCCAGGAAGCTGACAATTTCAAGGCTGAAGACATGAAGTTCAAAATGAAAGTTGAAGCAAGAAATGCTTTGGAAGATTATCTTTACGAAATGAGAAAAAAAATGAAGAATGATAGTGTTAGTTCAAAGCTTGACCGTGTAGACAAAGAGAAGATTAATTCTGCAATGATAAAGGGAGAAAGTTTGATTGATGGCAACCAGCAGGAAGATACGTTTGTTTTTGTAAACTTTTTGAAGGAGCTTAAGATGGTCTTTGAAGCTGCTATGAATAAGATCGACAAAGGTTGCTCAGATGTTGAAATGATTATGATTGATTAA
Protein sequence

>Msa1012060

MIVVKYRGKEKHLVPEEISAMILTQMREIAEAFLESPVENAVITVPAYFNDSQRRATKDAGEIAGLNVMQIINEPTAAALTYGLQKRSNCVEERNIFIFDLGGGTFDVSLLTIKNNLFEVKATSGDTHLGGEDFDNRMVKHFVKEFERKNNVDISGDPKALRRLRNSCERAKRELSYITKATIDIDAICQGIDFCSSITRAKFEQLNMDLFEKCMEIVKSCLADAKMDKSSVNDVVLVGGSSRIPKVKQLLQDFFKGKELCKSINPDEVVAYGAAVQAALLSEGIKTVPNLTLQDVTPLSLGKSIQGDIMDVVIPRNTSIPFKTTKIYETLEDNQSSVSIMVYEGERIKACENNLLGFFSLSIPPAPRGHVPIKVCFSMDADCILNVSAQDETTGNKKDITITNENGRLSRDEIERMVQEAENFKSEDMKFKKKVKAINALDDYLYNVKKVMKDDSVASKLNLVDKVKINSAMIKGKSLIDDKPMIVVKYRGKEKHLVPEEISAMILTQMREIAEAFLESPVENAVITVPAYFNDSQRRATKDAGEIAGLNVMQIINEPTAAALAYGLQKRSNCVEERNIFIFDLGGGTFDVSLLTIKDNVFQVKATSGDTHLGGEDFDNRMVEHFVKEFERKNQVDISGVPKALRRLRNSCERAKRELSYINKATIDIDALCQGIDFCSSITRAKFEQLNMDLFEKCMEIVKSCLADAKMDKSCADDVVLVGGSSRIPKVRQLLQEFFKGKELCKSINPDEAVAYGAAVQAVLLGEDTKNVPNLVLRDVTPLSLGIDTKGDIMSVVIPRNTSVPFKKTQVYYTPKVEGNEFLVDIMVYEGERIVASENNLLGLFDLKVPLAPRGLPLTVYFDIDANGILSVSAVEETSGNKNEITITNENGRLSREEIERMIQEADNFKAEDMKFKMKVEARNALEDYLYEMRKKMKNDSVSSKLDRVDKEKINSAMIKGESLIDGNQQEDTFVFVNFLKELKMVFEAAMNKIDKGCSDVEMIMID*