Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014110 | XP_013448091.1 | 86.255 | 502 | 29 | 2 | 1 | 463 | 1 | 501 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014110 | sp|Q6NQK2|NAC8_ARATH | 37.313 | 469 | 244 | 13 | 2 | 453 | 3 | 438 | 3.30e-81 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014110 | A0A072TZ22 | 86.255 | 502 | 29 | 2 | 1 | 463 | 1 | 501 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1014110 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1014110 | Msa1431860 | 0.980054 | 2.431800e-149 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014110 | MtrunA17_Chr7g0227071 | 86.255 | 502 | 29 | 2 | 1 | 463 | 1 | 501 | 0.0 | 853 |
| Msa1014110 | MtrunA17_Chr5g0422431 | 38.351 | 485 | 212 | 14 | 5 | 456 | 6 | 436 | 2.86e-92 | 286 |
| Msa1014110 | MtrunA17_Chr1g0198751 | 51.362 | 257 | 118 | 3 | 5 | 256 | 8 | 262 | 4.90e-88 | 277 |
| Msa1014110 | MtrunA17_Chr2g0282871 | 56.216 | 185 | 74 | 3 | 35 | 215 | 31 | 212 | 4.80e-67 | 217 |
| Msa1014110 | MtrunA17_Chr4g0046431 | 55.978 | 184 | 74 | 3 | 36 | 215 | 47 | 227 | 1.69e-64 | 211 |
| Msa1014110 | MtrunA17_Chr8g0367761 | 56.667 | 180 | 71 | 3 | 36 | 211 | 47 | 223 | 5.07e-63 | 205 |
| Msa1014110 | MtrunA17_Chr4g0040541 | 54.054 | 185 | 82 | 1 | 34 | 215 | 24 | 208 | 6.39e-63 | 205 |
| Msa1014110 | MtrunA17_Chr8g0389661 | 53.646 | 192 | 80 | 4 | 30 | 215 | 25 | 213 | 8.95e-61 | 206 |
| Msa1014110 | MtrunA17_Chr2g0324961 | 50.246 | 203 | 97 | 2 | 34 | 233 | 25 | 226 | 1.60e-56 | 189 |
| Msa1014110 | MtrunA17_Chr1g0198741 | 48.227 | 141 | 68 | 2 | 113 | 249 | 10 | 149 | 1.42e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014110 | AT3G01600.1 | 55.856 | 222 | 97 | 1 | 1 | 222 | 1 | 221 | 6.72e-85 | 265 |
| Msa1014110 | AT5G14490.4 | 46.897 | 290 | 146 | 3 | 1 | 285 | 1 | 287 | 1.35e-83 | 261 |
| Msa1014110 | AT5G14490.3 | 46.552 | 290 | 147 | 3 | 1 | 285 | 4 | 290 | 6.84e-83 | 260 |
| Msa1014110 | AT5G14490.2 | 51.867 | 241 | 113 | 2 | 1 | 241 | 1 | 238 | 7.05e-83 | 257 |
| Msa1014110 | AT5G14490.1 | 46.552 | 290 | 147 | 3 | 1 | 285 | 4 | 290 | 8.84e-83 | 259 |
| Msa1014110 | AT1G25580.1 | 37.313 | 469 | 244 | 13 | 2 | 453 | 3 | 438 | 3.35e-82 | 261 |
| Msa1014110 | AT4G29230.3 | 52.332 | 193 | 82 | 3 | 30 | 215 | 26 | 215 | 1.08e-62 | 210 |
| Msa1014110 | AT4G29230.1 | 52.332 | 193 | 82 | 3 | 30 | 215 | 26 | 215 | 3.18e-62 | 210 |
| Msa1014110 | AT4G29230.2 | 52.332 | 193 | 81 | 3 | 30 | 215 | 26 | 214 | 3.60e-62 | 210 |
| Msa1014110 | AT1G28470.1 | 49.515 | 206 | 91 | 4 | 36 | 233 | 53 | 253 | 3.31e-61 | 202 |
| Msa1014110 | AT4G28500.1 | 48.718 | 195 | 98 | 1 | 34 | 226 | 36 | 230 | 4.39e-61 | 202 |
| Msa1014110 | AT5G56620.2 | 49.495 | 198 | 84 | 6 | 30 | 215 | 20 | 213 | 1.69e-56 | 192 |
| Msa1014110 | AT5G56620.3 | 49.495 | 198 | 84 | 6 | 30 | 215 | 20 | 213 | 1.81e-56 | 193 |
| Msa1014110 | AT5G56620.1 | 49.495 | 198 | 84 | 6 | 30 | 215 | 20 | 213 | 3.80e-56 | 191 |
Find 118 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGGTGGATTTGGAGGATT+TGG | 0.165293 | 7_1:-21976171 | None:intergenic |
| CGTTTCTTTGATTTCAATAA+TGG | 0.247959 | 7_1:+21973072 | Msa1014110:exon |
| TTTCCTGTACGCGGTGGATT+TGG | 0.270486 | 7_1:-21976180 | None:intergenic |
| TGCCCCGCAATTTGATATTC+AGG | 0.273298 | 7_1:+21976821 | Msa1014110:CDS |
| TCCTTCTGATGTGGAAATAT+TGG | 0.291101 | 7_1:+21974560 | Msa1014110:CDS |
| TGCCATGCAATCTGATATTC+AGG | 0.303911 | 7_1:+21976749 | Msa1014110:CDS |
| AAATCTCGTCACACAATAAT+AGG | 0.320076 | 7_1:-21977061 | None:intergenic |
| TCCATGTTCTATTATAGCTT+TGG | 0.323257 | 7_1:-21975911 | None:intergenic |
| GATTCTGAATATCAGTTTGC+AGG | 0.324041 | 7_1:-21976959 | None:intergenic |
| ATTCAAAACAAAAGTCTATA+TGG | 0.333060 | 7_1:-21977590 | None:intergenic |
| GGATTTGGGTTTGGAGTCCT+TGG | 0.334390 | 7_1:-21976156 | None:intergenic |
| CCAGTCAGATTTGTAGGACT+TGG | 0.338941 | 7_1:-21975989 | None:intergenic |
| GGAATTGGTGAATAGATCTT+TGG | 0.341596 | 7_1:+21977627 | Msa1014110:three_prime_UTR |
| ACACATCCTGAAAATCTTCC+AGG | 0.345121 | 7_1:+21974681 | Msa1014110:CDS |
| AAAACGCTTCTGGTACAAAA+AGG | 0.355639 | 7_1:-21977417 | None:intergenic |
| CACATACAACTTTGCATGGT+TGG | 0.357647 | 7_1:+21976782 | Msa1014110:CDS |
| AGAACTGAACAAAACGCTTC+TGG | 0.370919 | 7_1:-21977427 | None:intergenic |
| TTCATGCAGAATTTGACATT+TGG | 0.373477 | 7_1:+21977331 | Msa1014110:intron |
| GTTTGATAGGTGGGCTATGA+GGG | 0.374223 | 7_1:+21977377 | Msa1014110:CDS |
| ATAGAATCAAATACACCATT+TGG | 0.377118 | 7_1:-21977659 | None:intergenic |
| TCCTCCAGAGTATGATCTTT+CGG | 0.378493 | 7_1:+21977223 | Msa1014110:CDS |
| GCAAACTGATATTCAGAATC+AGG | 0.380819 | 7_1:+21976962 | Msa1014110:CDS |
| ACAATGAATGCATATAGTTC+TGG | 0.388883 | 7_1:+21975814 | Msa1014110:CDS |
| AATAGAACATGGAGAACATA+AGG | 0.393301 | 7_1:+21975921 | Msa1014110:CDS |
| TGCATGGCATTTGATTCTAC+AGG | 0.393871 | 7_1:-21976735 | None:intergenic |
| TTTATAGGTGCTAAGAAAGA+TGG | 0.402571 | 7_1:+21975766 | Msa1014110:intron |
| ATCACAGGCTATGGAAAATT+CGG | 0.402981 | 7_1:+21977019 | Msa1014110:CDS |
| GATCTTGAATATCAGATTGC+AGG | 0.404223 | 7_1:-21976896 | None:intergenic |
| GATCCTGAATATCAAATTGC+GGG | 0.404686 | 7_1:-21976824 | None:intergenic |
| GGATTTGGAGGATTTGGGTT+TGG | 0.408606 | 7_1:-21976165 | None:intergenic |
| CCTTGTTCTCCTTCCAATGT+TGG | 0.412278 | 7_1:-21974648 | None:intergenic |
| CAGTCTTGTGCCAGCGTACA+TGG | 0.417800 | 7_1:-21975882 | None:intergenic |
| GCAATTTGATATTCAGGATC+AGG | 0.422075 | 7_1:+21976827 | Msa1014110:CDS |
| GGTTTGATAGGTGGGCTATG+AGG | 0.422768 | 7_1:+21977376 | Msa1014110:CDS |
| TCTATTTACTGATTCTCAAT+TGG | 0.425400 | 7_1:+21977097 | Msa1014110:CDS |
| TGAAACTTCAACTGCTGTCC+TGG | 0.427456 | 7_1:+21977181 | Msa1014110:CDS |
| AACAACTCTGCATGGTTGGC+TGG | 0.431062 | 7_1:+21976993 | Msa1014110:CDS |
| TCTATACGACAATGACAGTT+TGG | 0.435157 | 7_1:-21974172 | None:intergenic |
| TTCAACTCTGCATGGTTGGC+TGG | 0.436796 | 7_1:+21976858 | Msa1014110:CDS |
| GTTCGCAATGTTATACTGTC+AGG | 0.437129 | 7_1:-21976129 | None:intergenic |
| GCGGTGGATTTGGAGGATTT+GGG | 0.438699 | 7_1:-21976170 | None:intergenic |
| CACATTCAACTCTGCATGGT+TGG | 0.439730 | 7_1:+21976854 | Msa1014110:CDS |
| AAAATGCATCAGTACCATCT+AGG | 0.444254 | 7_1:+21976012 | Msa1014110:CDS |
| CAGGGCAGCTTGCGATTCAC+CGG | 0.446866 | 7_1:-21976940 | None:intergenic |
| GACAGTATCCTTGGTTTGAT+AGG | 0.449913 | 7_1:+21977364 | Msa1014110:CDS |
| AACCACGATGATGAATCTTT+CGG | 0.450635 | 7_1:-21975849 | None:intergenic |
| GCAATCTGATATTCAGGATC+AGG | 0.451964 | 7_1:+21976755 | Msa1014110:CDS |
| CCTGTACGCGGTGGATTTGG+AGG | 0.456268 | 7_1:-21976177 | None:intergenic |
| CACAAACAACTCTGCATGGT+TGG | 0.457938 | 7_1:+21976989 | Msa1014110:CDS |
| TGTCCTGGATACACTGGAAT+TGG | 0.458293 | 7_1:+21977196 | Msa1014110:CDS |
| TAGCGGCTAAATGCGGTGTT+GGG | 0.459673 | 7_1:+21974589 | Msa1014110:CDS |
| TACAACTTTGCATGGTTGGC+TGG | 0.462824 | 7_1:+21976786 | Msa1014110:CDS |
| CGTCTTCATCAGTCCCTAGA+TGG | 0.465866 | 7_1:-21976026 | None:intergenic |
| GACAACTCTGCATGGTTGGC+CGG | 0.472780 | 7_1:+21976921 | Msa1014110:CDS |
| TTGTTACACACCTCTGCAAA+TGG | 0.484050 | 7_1:-21976243 | None:intergenic |
| TAAGGGATTTAAGAAGATCA+TGG | 0.488299 | 7_1:+21975939 | Msa1014110:CDS |
| CTCTTCAGCTGATCAGATCA+AGG | 0.488697 | 7_1:+21974126 | Msa1014110:CDS |
| AGAGCGAGTTGAGTGTTGTT+CGG | 0.490322 | 7_1:-21973016 | None:intergenic |
| GGCTGGTGAATCACAGGCTA+TGG | 0.490693 | 7_1:+21977010 | Msa1014110:CDS |
| CATGTACGCTGGCACAAGAC+TGG | 0.493768 | 7_1:+21975883 | Msa1014110:CDS |
| CTTTGATTTCAATAATGGCT+AGG | 0.494505 | 7_1:+21973077 | Msa1014110:exon |
| CGAGGAGTTCATACCAACAT+TGG | 0.496522 | 7_1:+21974635 | Msa1014110:CDS |
| AGTATCCTTGGTTTGATAGG+TGG | 0.497056 | 7_1:+21977367 | Msa1014110:CDS |
| TCTCAAGACGACAGTATCCT+TGG | 0.497503 | 7_1:+21977355 | Msa1014110:CDS |
| ATGGTTGGCTGGTGAATCAC+AGG | 0.504683 | 7_1:+21976869 | Msa1014110:CDS |
| CCAAGTCCTACAAATCTGAC+TGG | 0.505991 | 7_1:+21975989 | Msa1014110:CDS |
| CCTCCAAATCCACCGCGTAC+AGG | 0.506008 | 7_1:+21976177 | Msa1014110:CDS |
| GGAAATATTGGAGCATTTAG+CGG | 0.509677 | 7_1:+21974572 | Msa1014110:CDS |
| ATAGAACATGGAGAACATAA+GGG | 0.517209 | 7_1:+21975922 | Msa1014110:CDS |
| TAGGTTTCTAGTGAGTGGCC+TGG | 0.519691 | 7_1:+21974513 | Msa1014110:intron |
| CTTTGGTACTGAAATCCAAA+TGG | 0.521041 | 7_1:+21977644 | Msa1014110:three_prime_UTR |
| GTATCCTTGGTTTGATAGGT+GGG | 0.521729 | 7_1:+21977368 | Msa1014110:CDS |
| AAAATTTGATCCTTCTGATG+TGG | 0.522815 | 7_1:+21974551 | Msa1014110:CDS |
| TTTATGCCGAGGGGAAAGCC+AGG | 0.525377 | 7_1:-21974531 | None:intergenic |
| AAAACACATACAACTTTGCA+TGG | 0.525483 | 7_1:+21976778 | Msa1014110:CDS |
| TATCCAATTCCAGTGTATCC+AGG | 0.527108 | 7_1:-21977199 | None:intergenic |
| ACTGATGAAGACGAGAAGAA+TGG | 0.528383 | 7_1:+21976036 | Msa1014110:CDS |
| CACTACGAAAACAAAATGAC+AGG | 0.538985 | 7_1:+21977140 | Msa1014110:CDS |
| AATGACAGTTTGGACATTCA+CGG | 0.539158 | 7_1:-21974162 | None:intergenic |
| CAATAATAGGTCATCCAAGC+CGG | 0.539478 | 7_1:-21977048 | None:intergenic |
| ATGGTTGGCTGGTGAATCAC+AGG | 0.540111 | 7_1:+21977004 | Msa1014110:CDS |
| GAGTGGCCTGGCTTTCCCCT+CGG | 0.541252 | 7_1:+21974525 | Msa1014110:CDS |
| TCCAATATTTCCACATCAGA+AGG | 0.541653 | 7_1:-21974561 | None:intergenic |
| TTATAGGTGCTAAGAAAGAT+GGG | 0.542670 | 7_1:+21975767 | Msa1014110:intron |
| AAATTCGGAATATGCCGGCT+TGG | 0.543783 | 7_1:+21977034 | Msa1014110:CDS |
| ATGGTTGGCTGGTGAATCAC+AGG | 0.543839 | 7_1:+21976797 | Msa1014110:CDS |
| GAATGGCTAATTAACATAAG+AGG | 0.545620 | 7_1:+21974073 | Msa1014110:CDS |
| TCACGACAACTCTGCATGGT+TGG | 0.547089 | 7_1:+21976917 | Msa1014110:CDS |
| TTTGATAGGTGGGCTATGAG+GGG | 0.553023 | 7_1:+21977378 | Msa1014110:exon |
| TTCACTGTTGCCATTTGCAG+AGG | 0.555067 | 7_1:+21976233 | Msa1014110:CDS |
| AACTGCTGTCCTGGATACAC+TGG | 0.556255 | 7_1:+21977190 | Msa1014110:CDS |
| AAATGCATCAGTACCATCTA+GGG | 0.560385 | 7_1:+21976013 | Msa1014110:CDS |
| CCAACATTGGAAGGAGAACA+AGG | 0.565627 | 7_1:+21974648 | Msa1014110:CDS |
| ATCCTGAATATCAGATTGCA+TGG | 0.571869 | 7_1:-21976751 | None:intergenic |
| ATCTTGAATATCAGATTGCA+GGG | 0.579882 | 7_1:-21976895 | None:intergenic |
| ATGGAAAATTCGGAATATGC+CGG | 0.581608 | 7_1:+21977029 | Msa1014110:CDS |
| ATTCTGAATATCAGTTTGCA+GGG | 0.585363 | 7_1:-21976958 | None:intergenic |
| CTGTGTAGGTTTCTAGTGAG+TGG | 0.586670 | 7_1:+21974508 | Msa1014110:intron |
| AGATCTATTCACCAATTCCA+CGG | 0.598780 | 7_1:-21977623 | None:intergenic |
| GAGTTCATACCAACATTGGA+AGG | 0.612629 | 7_1:+21974639 | Msa1014110:CDS |
| CTTACCGAAAGATCATACTC+TGG | 0.616790 | 7_1:-21977227 | None:intergenic |
| GCTGATCAGATCAAGGATTG+TGG | 0.624068 | 7_1:+21974133 | Msa1014110:CDS |
| ACCAAAGCTATAATAGAACA+TGG | 0.626362 | 7_1:+21975910 | Msa1014110:CDS |
| TAACATTGCGAACAAGTCCA+AGG | 0.631835 | 7_1:+21976139 | Msa1014110:CDS |
| ACAACACATTCAACTCTGCA+TGG | 0.632912 | 7_1:+21976850 | Msa1014110:CDS |
| GCATGGCATTTGATTCTACA+GGG | 0.633182 | 7_1:-21976734 | None:intergenic |
| ATAACACAAACAACTCTGCA+TGG | 0.636499 | 7_1:+21976985 | Msa1014110:CDS |
| TGATCCTGAATATCAAATTG+CGG | 0.639621 | 7_1:-21976825 | None:intergenic |
| AAGATCACGACAACTCTGCA+TGG | 0.641984 | 7_1:+21976913 | Msa1014110:CDS |
| ACCGAAAGATCATACTCTGG+AGG | 0.654254 | 7_1:-21977224 | None:intergenic |
| ACAGGAAAATGTGTTGACAA+TGG | 0.656459 | 7_1:+21976195 | Msa1014110:CDS |
| AACTCCTCGATAAACATGTG+AGG | 0.657869 | 7_1:-21974621 | None:intergenic |
| CAACTGAAGACCATGTACGC+TGG | 0.659374 | 7_1:+21975872 | Msa1014110:CDS |
| GAGCATTTAGCGGCTAAATG+CGG | 0.674801 | 7_1:+21974582 | Msa1014110:CDS |
| CGCCGAAAGATTCATCATCG+TGG | 0.681320 | 7_1:+21975847 | Msa1014110:CDS |
| ATCCTGAATATCAAATTGCG+GGG | 0.687588 | 7_1:-21976823 | None:intergenic |
| AAAGCCTCACATGTTTATCG+AGG | 0.708264 | 7_1:+21974617 | Msa1014110:CDS |
| ATAGCCCACCTATCAAACCA+AGG | 0.709079 | 7_1:-21977372 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTGACTTTT+TGG | + | chr7_1:21973409-21973428 | Msa1014110:intron | 10.0% |
| !!! | TTTTTTTTTTTTGACTTTTT+GGG | + | chr7_1:21973410-21973429 | Msa1014110:intron | 10.0% |
| !!! | TTGTTTATTAATTTTTTTAC+TGG | + | chr7_1:21976380-21976399 | Msa1014110:intron | 10.0% |
| !! | AAATATAAAAAATGAAGTAT+GGG | - | chr7_1:21977276-21977295 | None:intergenic | 10.0% |
| !! | AAAATATAAAAAATGAAGTA+TGG | - | chr7_1:21977277-21977296 | None:intergenic | 10.0% |
| !!! | AAAGTTATTTTTCTTTTATT+TGG | + | chr7_1:21977476-21977495 | Msa1014110:three_prime_UTR | 10.0% |
| !! | TTTATACACAACAAAAAAAT+GGG | - | chr7_1:21973170-21973189 | None:intergenic | 15.0% |
| !!! | TTTTATACACAACAAAAAAA+TGG | - | chr7_1:21973171-21973190 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTATCTTTTGAG+TGG | + | chr7_1:21973195-21973214 | Msa1014110:intron | 15.0% |
| !! | AAATAAAGGAATTTACAATT+TGG | + | chr7_1:21973507-21973526 | Msa1014110:intron | 15.0% |
| !! | AATAAAGGAATTTACAATTT+GGG | + | chr7_1:21973508-21973527 | Msa1014110:intron | 15.0% |
| !! | ATTATAAGAGTAATAAACAT+AGG | - | chr7_1:21975401-21975420 | None:intergenic | 15.0% |
| !!! | TATTATCTGTTTTGTTTTAT+AGG | + | chr7_1:21975751-21975770 | Msa1014110:intron | 15.0% |
| !!! | AACTTTAAATTTTATGAACT+AGG | + | chr7_1:21976698-21976717 | Msa1014110:intron | 15.0% |
| !! | CAAAATATCATTCCATATAT+AGG | - | chr7_1:21973482-21973501 | None:intergenic | 20.0% |
| !!! | ATATATGGAATGATATTTTG+TGG | + | chr7_1:21973482-21973501 | Msa1014110:intron | 20.0% |
| !!! | TATATGGAATGATATTTTGT+GGG | + | chr7_1:21973483-21973502 | Msa1014110:intron | 20.0% |
| !! | ATAAAGGAATTTACAATTTG+GGG | + | chr7_1:21973509-21973528 | Msa1014110:intron | 20.0% |
| !!! | ACTTAGTATAGATTTTATGT+TGG | + | chr7_1:21973856-21973875 | Msa1014110:intron | 20.0% |
| !!! | TGTTTTTATGTAGTACAAAT+TGG | - | chr7_1:21974721-21974740 | None:intergenic | 20.0% |
| !!! | GGTAATAGTATTGTTTTAAA+CGG | + | chr7_1:21974856-21974875 | Msa1014110:intron | 20.0% |
| !! | TCTAATCATTAAGAAGAATT+TGG | + | chr7_1:21974952-21974971 | Msa1014110:intron | 20.0% |
| !! | AAAAATCTTGAAAGTGATAA+GGG | + | chr7_1:21975094-21975113 | Msa1014110:intron | 20.0% |
| !! | CCTTAACTTATAAAATATGA+TGG | - | chr7_1:21975257-21975276 | None:intergenic | 20.0% |
| !!! | CCATCATATTTTATAAGTTA+AGG | + | chr7_1:21975254-21975273 | Msa1014110:intron | 20.0% |
| !! | TGTTTATTACTCTTATAATG+TGG | + | chr7_1:21975402-21975421 | Msa1014110:intron | 20.0% |
| !!! | AGTAAAAACAGTGTTATTTT+TGG | - | chr7_1:21976350-21976369 | None:intergenic | 20.0% |
| !! | TGTAATTAAAATTTGAAGAC+AGG | + | chr7_1:21976458-21976477 | Msa1014110:intron | 20.0% |
| !! | ATTCAAAACAAAAGTCTATA+TGG | - | chr7_1:21977593-21977612 | None:intergenic | 20.0% |
| !! | CGTTTCTTTGATTTCAATAA+TGG | + | chr7_1:21973072-21973091 | Msa1014110:exon | 25.0% |
| !!! | TTTTATCTTTTGAGTGGTTT+TGG | + | chr7_1:21973201-21973220 | Msa1014110:intron | 25.0% |
| !!! | TATTTTTTTCCTCCTTTGTT+AGG | + | chr7_1:21973264-21973283 | Msa1014110:intron | 25.0% |
| !!! | ATTTTTTTCCTCCTTTGTTA+GGG | + | chr7_1:21973265-21973284 | Msa1014110:intron | 25.0% |
| !!! | ATGATGTGAATGGATTATTT+TGG | + | chr7_1:21973450-21973469 | Msa1014110:intron | 25.0% |
| !!! | TTTTGGCTTTTTCCTATATA+TGG | + | chr7_1:21973467-21973486 | Msa1014110:intron | 25.0% |
| !! | GATATTTTGTGGGTAAATAA+AGG | + | chr7_1:21973493-21973512 | Msa1014110:intron | 25.0% |
| ! | TAAAGGAATTTACAATTTGG+GGG | + | chr7_1:21973510-21973529 | Msa1014110:intron | 25.0% |
| ! | CAAAATATACCATTCATATG+TGG | - | chr7_1:21973662-21973681 | None:intergenic | 25.0% |
| ! | ATTCTTGAAAAAGTTTAGCA+TGG | + | chr7_1:21974435-21974454 | Msa1014110:intron | 25.0% |
| ! | TTCTTGAAAAAGTTTAGCAT+GGG | + | chr7_1:21974436-21974455 | Msa1014110:intron | 25.0% |
| ! | TAGCATTAGTGTAGAAAATA+TGG | + | chr7_1:21974835-21974854 | Msa1014110:intron | 25.0% |
| ! | GTAAGACATTATCTATTGTT+TGG | + | chr7_1:21975015-21975034 | Msa1014110:intron | 25.0% |
| ! | AATAACAGTGTTCTATCATT+AGG | - | chr7_1:21975059-21975078 | None:intergenic | 25.0% |
| ! | CAAAAATCTTGAAAGTGATA+AGG | + | chr7_1:21975093-21975112 | Msa1014110:intron | 25.0% |
| ! | CAGTTAACATTAGACTAATA+TGG | - | chr7_1:21975161-21975180 | None:intergenic | 25.0% |
| ! | AAATGAACTGAATCTTGATT+AGG | - | chr7_1:21975369-21975388 | None:intergenic | 25.0% |
| !! | ACACAATGAACTAGATTTTT+GGG | - | chr7_1:21975447-21975466 | None:intergenic | 25.0% |
| !! | AACACAATGAACTAGATTTT+TGG | - | chr7_1:21975448-21975467 | None:intergenic | 25.0% |
| !! | AAAATCTAGTTCATTGTGTT+AGG | + | chr7_1:21975448-21975467 | Msa1014110:intron | 25.0% |
| !! | AAATCTAGTTCATTGTGTTA+GGG | + | chr7_1:21975449-21975468 | Msa1014110:intron | 25.0% |
| ! | TGAATGCATATAGTAAACAA+GGG | + | chr7_1:21975651-21975670 | Msa1014110:intron | 25.0% |
| ! | GAAAAATGAAGATAAAGCAA+TGG | + | chr7_1:21976098-21976117 | Msa1014110:CDS | 25.0% |
| !!! | ATTTTTGGAAAAGAAACTGA+AGG | - | chr7_1:21976335-21976354 | None:intergenic | 25.0% |
| ! | TAAAATTTGAAGACAGGAAT+TGG | + | chr7_1:21976464-21976483 | Msa1014110:intron | 25.0% |
| !!! | AACTACTTTTATCTTCTATG+AGG | - | chr7_1:21976533-21976552 | None:intergenic | 25.0% |
| !!! | TCTATTTACTGATTCTCAAT+TGG | + | chr7_1:21977097-21977116 | Msa1014110:CDS | 25.0% |
| !!! | TAGTTACATGCAGTTTTTTT+TGG | + | chr7_1:21977532-21977551 | Msa1014110:three_prime_UTR | 25.0% |
| !!! | GCAGTTTTTTTTGGTTAAAT+TGG | + | chr7_1:21977541-21977560 | Msa1014110:three_prime_UTR | 25.0% |
| !!! | TTTTTTGGTTAAATTGGCTT+TGG | + | chr7_1:21977547-21977566 | Msa1014110:three_prime_UTR | 25.0% |
| ! | ATAGAATCAAATACACCATT+TGG | - | chr7_1:21977662-21977681 | None:intergenic | 25.0% |
| ! | CTTTGATTTCAATAATGGCT+AGG | + | chr7_1:21973077-21973096 | Msa1014110:exon | 30.0% |
| AATTGAACTATCCAGTTTCT+CGG | + | chr7_1:21973324-21973343 | Msa1014110:intron | 30.0% | |
| ATTTACAATTTGGGGGTTTA+TGG | + | chr7_1:21973517-21973536 | Msa1014110:intron | 30.0% | |
| TTTACAATTTGGGGGTTTAT+GGG | + | chr7_1:21973518-21973537 | Msa1014110:intron | 30.0% | |
| TCATCATCAATTGCAGAAAA+TGG | + | chr7_1:21973608-21973627 | Msa1014110:intron | 30.0% | |
| AATATACCATTCATATGTGG+TGG | - | chr7_1:21973659-21973678 | None:intergenic | 30.0% | |
| ! | ATATTTTGTGATCGCGATAT+AGG | + | chr7_1:21973674-21973693 | Msa1014110:intron | 30.0% |
| ! | AAAATTTGGCCCTTGTATTT+TGG | + | chr7_1:21973812-21973831 | Msa1014110:intron | 30.0% |
| AGAAAACCACCAAAATACAA+GGG | - | chr7_1:21973824-21973843 | None:intergenic | 30.0% | |
| TAGAAAACCACCAAAATACA+AGG | - | chr7_1:21973825-21973844 | None:intergenic | 30.0% | |
| !! | TATTTGTTGATTTATCCTGC+AGG | + | chr7_1:21974050-21974069 | Msa1014110:intron | 30.0% |
| !! | ATTTGTTGATTTATCCTGCA+GGG | + | chr7_1:21974051-21974070 | Msa1014110:intron | 30.0% |
| GAATGGCTAATTAACATAAG+AGG | + | chr7_1:21974073-21974092 | Msa1014110:CDS | 30.0% | |
| !! | GCTTCAAATTTTCTTGTTTC+TGG | - | chr7_1:21974277-21974296 | None:intergenic | 30.0% |
| AAAATGCAGGGTATAGTAAT+TGG | - | chr7_1:21974349-21974368 | None:intergenic | 30.0% | |
| TCCAACAAAAGAAAAATGCA+GGG | - | chr7_1:21974361-21974380 | None:intergenic | 30.0% | |
| TTCCAACAAAAGAAAAATGC+AGG | - | chr7_1:21974362-21974381 | None:intergenic | 30.0% | |
| ! | TCAAGTTTTTAATGTGCTTG+CGG | + | chr7_1:21974394-21974413 | Msa1014110:intron | 30.0% |
| AAAATTTGATCCTTCTGATG+TGG | + | chr7_1:21974551-21974570 | Msa1014110:CDS | 30.0% | |
| TCAAATACAATGGACAAAGT+GGG | - | chr7_1:21974747-21974766 | None:intergenic | 30.0% | |
| ATCAAATACAATGGACAAAG+TGG | - | chr7_1:21974748-21974767 | None:intergenic | 30.0% | |
| AGCTCATTGATCAAATACAA+TGG | - | chr7_1:21974757-21974776 | None:intergenic | 30.0% | |
| ATTGTATTTGATCAATGAGC+TGG | + | chr7_1:21974756-21974775 | Msa1014110:intron | 30.0% | |
| ! | AGAACATACACATTCTGAAA+TGG | + | chr7_1:21974796-21974815 | Msa1014110:intron | 30.0% |
| ! | CACATGTAATTTGTAACCAT+GGG | - | chr7_1:21974907-21974926 | None:intergenic | 30.0% |
| ! | TCACATGTAATTTGTAACCA+TGG | - | chr7_1:21974908-21974927 | None:intergenic | 30.0% |
| TGGTTACAAATTACATGTGA+AGG | + | chr7_1:21974908-21974927 | Msa1014110:intron | 30.0% | |
| GGTTACAAATTACATGTGAA+GGG | + | chr7_1:21974909-21974928 | Msa1014110:intron | 30.0% | |
| CATTAGACTAATATGGAATG+CGG | - | chr7_1:21975154-21975173 | None:intergenic | 30.0% | |
| CATAATGTAACTGACATTCT+TGG | + | chr7_1:21975293-21975312 | Msa1014110:intron | 30.0% | |
| !! | TGATTAGGTTCTAGTTTGAA+GGG | - | chr7_1:21975354-21975373 | None:intergenic | 30.0% |
| !! | TTGATTAGGTTCTAGTTTGA+AGG | - | chr7_1:21975355-21975374 | None:intergenic | 30.0% |
| !! | TAGATTTTTGGGCTTGATTT+AGG | - | chr7_1:21975436-21975455 | None:intergenic | 30.0% |
| ACGGAGGAAAATAAATATAG+CGG | + | chr7_1:21975525-21975544 | Msa1014110:intron | 30.0% | |
| !! | ATGACATTTGCTGATCTTTT+AGG | + | chr7_1:21975585-21975604 | Msa1014110:intron | 30.0% |
| GTGAATGCATATAGTAAACA+AGG | + | chr7_1:21975650-21975669 | Msa1014110:intron | 30.0% | |
| GAATGCATATAGTAAACAAG+GGG | + | chr7_1:21975652-21975671 | Msa1014110:intron | 30.0% | |
| CTTCAAAACAGAAAAAGATC+AGG | - | chr7_1:21975726-21975745 | None:intergenic | 30.0% | |
| TTTATAGGTGCTAAGAAAGA+TGG | + | chr7_1:21975766-21975785 | Msa1014110:intron | 30.0% | |
| TTATAGGTGCTAAGAAAGAT+GGG | + | chr7_1:21975767-21975786 | Msa1014110:intron | 30.0% | |
| ACAATGAATGCATATAGTTC+TGG | + | chr7_1:21975814-21975833 | Msa1014110:CDS | 30.0% | |
| ACCAAAGCTATAATAGAACA+TGG | + | chr7_1:21975910-21975929 | Msa1014110:CDS | 30.0% | |
| TCCATGTTCTATTATAGCTT+TGG | - | chr7_1:21975914-21975933 | None:intergenic | 30.0% | |
| AATAGAACATGGAGAACATA+AGG | + | chr7_1:21975921-21975940 | Msa1014110:CDS | 30.0% | |
| ATAGAACATGGAGAACATAA+GGG | + | chr7_1:21975922-21975941 | Msa1014110:CDS | 30.0% | |
| TAAGGGATTTAAGAAGATCA+TGG | + | chr7_1:21975939-21975958 | Msa1014110:CDS | 30.0% | |
| AACACAGAAAAGTGAAAAGA+AGG | + | chr7_1:21976426-21976445 | Msa1014110:intron | 30.0% | |
| TTCTATGAGGTGGAATAATA+AGG | - | chr7_1:21976520-21976539 | None:intergenic | 30.0% | |
| ! | TACTTTTATCTTCTATGAGG+TGG | - | chr7_1:21976530-21976549 | None:intergenic | 30.0% |
| AAAACACATACAACTTTGCA+TGG | + | chr7_1:21976778-21976797 | Msa1014110:CDS | 30.0% | |
| TGATCCTGAATATCAAATTG+CGG | - | chr7_1:21976828-21976847 | None:intergenic | 30.0% | |
| ATCTTGAATATCAGATTGCA+GGG | - | chr7_1:21976898-21976917 | None:intergenic | 30.0% | |
| ATTCTGAATATCAGTTTGCA+GGG | - | chr7_1:21976961-21976980 | None:intergenic | 30.0% | |
| AAATCTCGTCACACAATAAT+AGG | - | chr7_1:21977064-21977083 | None:intergenic | 30.0% | |
| AAGCCTCAAATTATGGTTAT+TGG | + | chr7_1:21977247-21977266 | Msa1014110:intron | 30.0% | |
| CAACCAATAACCATAATTTG+AGG | - | chr7_1:21977253-21977272 | None:intergenic | 30.0% | |
| ! | ATTTTTCCAAGTTACTGACA+TGG | + | chr7_1:21977292-21977311 | Msa1014110:intron | 30.0% |
| TTCATGCAGAATTTGACATT+TGG | + | chr7_1:21977331-21977350 | Msa1014110:intron | 30.0% | |
| ! | TGGTGTATTTTGTTCTTCTA+TGG | + | chr7_1:21977567-21977586 | Msa1014110:three_prime_UTR | 30.0% |
| AACTGTTCAAACCCTAACAA+AGG | - | chr7_1:21973279-21973298 | None:intergenic | 35.0% | |
| !! | GTTCAATTGGTTTGAGCTAA+CGG | - | chr7_1:21973312-21973331 | None:intergenic | 35.0% |
| GAGAAACTGGATAGTTCAAT+TGG | - | chr7_1:21973325-21973344 | None:intergenic | 35.0% | |
| ATTGAACTATCCAGTTTCTC+GGG | + | chr7_1:21973325-21973344 | Msa1014110:intron | 35.0% | |
| !!! | TTGACTTTTTGGGTTTGTGA+TGG | + | chr7_1:21973420-21973439 | Msa1014110:intron | 35.0% |
| TGGTCAATGAATGATGTGAA+TGG | + | chr7_1:21973440-21973459 | Msa1014110:intron | 35.0% | |
| CACATTGACATTGCAGAAAA+TGG | + | chr7_1:21973557-21973576 | Msa1014110:intron | 35.0% | |
| TTGACTTTAAACCACGATTG+AGG | + | chr7_1:21973725-21973744 | Msa1014110:intron | 35.0% | |
| TGAGGATGAATCAGTTGTAT+TGG | + | chr7_1:21973743-21973762 | Msa1014110:intron | 35.0% | |
| CTATACCAAAGATTGCTACA+CGG | + | chr7_1:21973780-21973799 | Msa1014110:intron | 35.0% | |
| AATGACAGTTTGGACATTCA+CGG | - | chr7_1:21974165-21974184 | None:intergenic | 35.0% | |
| TCTATACGACAATGACAGTT+TGG | - | chr7_1:21974175-21974194 | None:intergenic | 35.0% | |
| GCAAAGTCAATAGAAACATG+AGG | - | chr7_1:21974319-21974338 | None:intergenic | 35.0% | |
| ! | ACCCTGCATTTTTCTTTTGT+TGG | + | chr7_1:21974357-21974376 | Msa1014110:intron | 35.0% |
| !!! | AATGTTGTTTTTGCCTGTGT+AGG | + | chr7_1:21974494-21974513 | Msa1014110:intron | 35.0% |
| ! | AGGATCAAATTTTATGCCGA+GGG | - | chr7_1:21974544-21974563 | None:intergenic | 35.0% |
| ! | AAGGATCAAATTTTATGCCG+AGG | - | chr7_1:21974545-21974564 | None:intergenic | 35.0% |
| TCCTTCTGATGTGGAAATAT+TGG | + | chr7_1:21974560-21974579 | Msa1014110:CDS | 35.0% | |
| TCCAATATTTCCACATCAGA+AGG | - | chr7_1:21974564-21974583 | None:intergenic | 35.0% | |
| ! | GGAAATATTGGAGCATTTAG+CGG | + | chr7_1:21974572-21974591 | Msa1014110:CDS | 35.0% |
| CAAATACAATGGACAAAGTG+GGG | - | chr7_1:21974746-21974765 | None:intergenic | 35.0% | |
| AGCTGGTAAAATGAATTGAG+TGG | + | chr7_1:21974773-21974792 | Msa1014110:intron | 35.0% | |
| GGGAAACTAAAGCAAACTAT+AGG | + | chr7_1:21974929-21974948 | Msa1014110:intron | 35.0% | |
| ATCTTGAAAGTGATAAGGGA+TGG | + | chr7_1:21975098-21975117 | Msa1014110:intron | 35.0% | |
| ATTGATATCTGCCAGAAAGT+TGG | + | chr7_1:21975219-21975238 | Msa1014110:intron | 35.0% | |
| !! | ATTAGGTTCTAGTTTGAAGG+GGG | - | chr7_1:21975352-21975371 | None:intergenic | 35.0% |
| !! | GATTAGGTTCTAGTTTGAAG+GGG | - | chr7_1:21975353-21975372 | None:intergenic | 35.0% |
| ! | TGACATGTGTTTGTTGAAGT+GGG | - | chr7_1:21975481-21975500 | None:intergenic | 35.0% |
| ! | ATGACATGTGTTTGTTGAAG+TGG | - | chr7_1:21975482-21975501 | None:intergenic | 35.0% |
| CAACAAACACATGTCATGTT+CGG | + | chr7_1:21975485-21975504 | Msa1014110:intron | 35.0% | |
| !! | TCTTTTAGGTGTACGAAACA+TGG | + | chr7_1:21975599-21975618 | Msa1014110:intron | 35.0% |
| !! | CTTTTAGGTGTACGAAACAT+GGG | + | chr7_1:21975600-21975619 | Msa1014110:intron | 35.0% |
| !! | TTTTAGGTGTACGAAACATG+GGG | + | chr7_1:21975601-21975620 | Msa1014110:intron | 35.0% |
| AACCACGATGATGAATCTTT+CGG | - | chr7_1:21975852-21975871 | None:intergenic | 35.0% | |
| ! | CATTTTCCAGTCAGATTTGT+AGG | - | chr7_1:21975998-21976017 | None:intergenic | 35.0% |
| AAAATGCATCAGTACCATCT+AGG | + | chr7_1:21976012-21976031 | Msa1014110:CDS | 35.0% | |
| AAATGCATCAGTACCATCTA+GGG | + | chr7_1:21976013-21976032 | Msa1014110:CDS | 35.0% | |
| ! | ACAGGAAAATGTGTTGACAA+TGG | + | chr7_1:21976195-21976214 | Msa1014110:CDS | 35.0% |
| ! | GTAACAATCTATGCTGCTTA+TGG | + | chr7_1:21976259-21976278 | Msa1014110:intron | 35.0% |
| AGATAGAACAGAAACCAAAC+TGG | + | chr7_1:21976494-21976513 | Msa1014110:intron | 35.0% | |
| ATCCTGAATATCAGATTGCA+TGG | - | chr7_1:21976754-21976773 | None:intergenic | 35.0% | |
| ATCCTGAATATCAAATTGCG+GGG | - | chr7_1:21976826-21976845 | None:intergenic | 35.0% | |
| GATCCTGAATATCAAATTGC+GGG | - | chr7_1:21976827-21976846 | None:intergenic | 35.0% | |
| GCAATTTGATATTCAGGATC+AGG | + | chr7_1:21976827-21976846 | Msa1014110:CDS | 35.0% | |
| GATCTTGAATATCAGATTGC+AGG | - | chr7_1:21976899-21976918 | None:intergenic | 35.0% | |
| GATTCTGAATATCAGTTTGC+AGG | - | chr7_1:21976962-21976981 | None:intergenic | 35.0% | |
| GCAAACTGATATTCAGAATC+AGG | + | chr7_1:21976962-21976981 | Msa1014110:CDS | 35.0% | |
| ATAACACAAACAACTCTGCA+TGG | + | chr7_1:21976985-21977004 | Msa1014110:CDS | 35.0% | |
| ATCACAGGCTATGGAAAATT+CGG | + | chr7_1:21977019-21977038 | Msa1014110:CDS | 35.0% | |
| ATGGAAAATTCGGAATATGC+CGG | + | chr7_1:21977029-21977048 | Msa1014110:CDS | 35.0% | |
| CACTACGAAAACAAAATGAC+AGG | + | chr7_1:21977140-21977159 | Msa1014110:CDS | 35.0% | |
| TTTCGGTAAGCCTCAAATTA+TGG | + | chr7_1:21977240-21977259 | Msa1014110:intron | 35.0% | |
| AAAACGCTTCTGGTACAAAA+AGG | - | chr7_1:21977420-21977439 | None:intergenic | 35.0% | |
| ! | TTTGAATTTTGTCAAAGCCG+TGG | + | chr7_1:21977606-21977625 | Msa1014110:three_prime_UTR | 35.0% |
| AGATCTATTCACCAATTCCA+CGG | - | chr7_1:21977626-21977645 | None:intergenic | 35.0% | |
| GGAATTGGTGAATAGATCTT+TGG | + | chr7_1:21977627-21977646 | Msa1014110:three_prime_UTR | 35.0% | |
| ! | CTTTGGTACTGAAATCCAAA+TGG | + | chr7_1:21977644-21977663 | Msa1014110:three_prime_UTR | 35.0% |
| TGTTCAAACCCTAACAAAGG+AGG | - | chr7_1:21973276-21973295 | None:intergenic | 40.0% | |
| ! | AACTGATTCATCCTCAATCG+TGG | - | chr7_1:21973739-21973758 | None:intergenic | 40.0% |
| GAATCAGTTGTATTGGACTG+TGG | + | chr7_1:21973750-21973769 | Msa1014110:intron | 40.0% | |
| ! | CACGGTCGCAATCTAAAATT+TGG | + | chr7_1:21973798-21973817 | Msa1014110:intron | 40.0% |
| !! | ATTTGGCCCTTGTATTTTGG+TGG | + | chr7_1:21973815-21973834 | Msa1014110:intron | 40.0% |
| GCTTAAAAAGACGTCTGCTT+AGG | - | chr7_1:21973960-21973979 | None:intergenic | 40.0% | |
| TTGATTTATCCTGCAGGGAA+TGG | + | chr7_1:21974056-21974075 | Msa1014110:intron | 40.0% | |
| ! | GGATCAAATTTTATGCCGAG+GGG | - | chr7_1:21974543-21974562 | None:intergenic | 40.0% |
| AAAGCCTCACATGTTTATCG+AGG | + | chr7_1:21974617-21974636 | Msa1014110:CDS | 40.0% | |
| AACTCCTCGATAAACATGTG+AGG | - | chr7_1:21974624-21974643 | None:intergenic | 40.0% | |
| GAGTTCATACCAACATTGGA+AGG | + | chr7_1:21974639-21974658 | Msa1014110:CDS | 40.0% | |
| ACACATCCTGAAAATCTTCC+AGG | + | chr7_1:21974681-21974700 | Msa1014110:CDS | 40.0% | |
| ! | TTCTCACCTGGAAGATTTTC+AGG | - | chr7_1:21974690-21974709 | None:intergenic | 40.0% |
| GTACATTGTGACCAACTTTC+TGG | - | chr7_1:21975233-21975252 | None:intergenic | 40.0% | |
| TGCTAGAGTTATGGTATTGC+AGG | - | chr7_1:21975319-21975338 | None:intergenic | 40.0% | |
| ! | ACGGTTTTCTGCTAGAGTTA+TGG | - | chr7_1:21975328-21975347 | None:intergenic | 40.0% |
| TGGGCTTGATTTAGGTGAAA+TGG | - | chr7_1:21975428-21975447 | None:intergenic | 40.0% | |
| ! | GACATGTGTTTGTTGAAGTG+GGG | - | chr7_1:21975480-21975499 | None:intergenic | 40.0% |
| TGTTCGGTACTCTTTGTTGA+TGG | + | chr7_1:21975501-21975520 | Msa1014110:intron | 40.0% | |
| GTTCGGTACTCTTTGTTGAT+GGG | + | chr7_1:21975502-21975521 | Msa1014110:intron | 40.0% | |
| CAAGGGGTTTAAGAAGATCA+TGG | + | chr7_1:21975668-21975687 | Msa1014110:intron | 40.0% | |
| ACTGATGAAGACGAGAAGAA+TGG | + | chr7_1:21976036-21976055 | Msa1014110:CDS | 40.0% | |
| GTTCGCAATGTTATACTGTC+AGG | - | chr7_1:21976132-21976151 | None:intergenic | 40.0% | |
| TAACATTGCGAACAAGTCCA+AGG | + | chr7_1:21976139-21976158 | Msa1014110:CDS | 40.0% | |
| ! | TCAACACATTTTCCTGTACG+CGG | - | chr7_1:21976192-21976211 | None:intergenic | 40.0% |
| TTGTTACACACCTCTGCAAA+TGG | - | chr7_1:21976246-21976265 | None:intergenic | 40.0% | |
| GTGGAATAATAAGGCCAGTT+TGG | - | chr7_1:21976511-21976530 | None:intergenic | 40.0% | |
| GCATGGCATTTGATTCTACA+GGG | - | chr7_1:21976737-21976756 | None:intergenic | 40.0% | |
| TGCATGGCATTTGATTCTAC+AGG | - | chr7_1:21976738-21976757 | None:intergenic | 40.0% | |
| TGCCATGCAATCTGATATTC+AGG | + | chr7_1:21976749-21976768 | Msa1014110:CDS | 40.0% | |
| GCAATCTGATATTCAGGATC+AGG | + | chr7_1:21976755-21976774 | Msa1014110:CDS | 40.0% | |
| CACATACAACTTTGCATGGT+TGG | + | chr7_1:21976782-21976801 | Msa1014110:CDS | 40.0% | |
| ACAACACATTCAACTCTGCA+TGG | + | chr7_1:21976850-21976869 | Msa1014110:CDS | 40.0% | |
| CAATAATAGGTCATCCAAGC+CGG | - | chr7_1:21977051-21977070 | None:intergenic | 40.0% | |
| TATCCAATTCCAGTGTATCC+AGG | - | chr7_1:21977202-21977221 | None:intergenic | 40.0% | |
| TCCTCCAGAGTATGATCTTT+CGG | + | chr7_1:21977223-21977242 | Msa1014110:CDS | 40.0% | |
| CTTACCGAAAGATCATACTC+TGG | - | chr7_1:21977230-21977249 | None:intergenic | 40.0% | |
| CACATACCATGTCAGTAACT+TGG | - | chr7_1:21977301-21977320 | None:intergenic | 40.0% | |
| ! | GACAGTATCCTTGGTTTGAT+AGG | + | chr7_1:21977364-21977383 | Msa1014110:CDS | 40.0% |
| ! | AGTATCCTTGGTTTGATAGG+TGG | + | chr7_1:21977367-21977386 | Msa1014110:CDS | 40.0% |
| ! | GTATCCTTGGTTTGATAGGT+GGG | + | chr7_1:21977368-21977387 | Msa1014110:CDS | 40.0% |
| AGAACTGAACAAAACGCTTC+TGG | - | chr7_1:21977430-21977449 | None:intergenic | 40.0% | |
| ! | TTTTGTCAAAGCCGTGGAAT+TGG | + | chr7_1:21977612-21977631 | Msa1014110:three_prime_UTR | 40.0% |
| ! | AGAGCGAGTTGAGTGTTGTT+CGG | - | chr7_1:21973019-21973038 | None:intergenic | 45.0% |
| CTATCCAGTTTCTCGGGTTT+CGG | + | chr7_1:21973331-21973350 | Msa1014110:intron | 45.0% | |
| !! | AATGTGGTGTTGTGTAGGCT+AGG | + | chr7_1:21973356-21973375 | Msa1014110:intron | 45.0% |
| !! | ATGTGGTGTTGTGTAGGCTA+GGG | + | chr7_1:21973357-21973376 | Msa1014110:intron | 45.0% |
| TCAGCACCACCACATATGAA+TGG | + | chr7_1:21973650-21973669 | Msa1014110:intron | 45.0% | |
| !! | TCTCTAAAACCCTAATGCCG+CGG | - | chr7_1:21973700-21973719 | None:intergenic | 45.0% |
| GTTAATTAGCCATTCCCTGC+AGG | - | chr7_1:21974068-21974087 | None:intergenic | 45.0% | |
| CTCTTCAGCTGATCAGATCA+AGG | + | chr7_1:21974126-21974145 | Msa1014110:CDS | 45.0% | |
| GCTGATCAGATCAAGGATTG+TGG | + | chr7_1:21974133-21974152 | Msa1014110:CDS | 45.0% | |
| CACTCACTAGAAACCTACAC+AGG | - | chr7_1:21974510-21974529 | None:intergenic | 45.0% | |
| !! | CTGTGTAGGTTTCTAGTGAG+TGG | + | chr7_1:21974508-21974527 | Msa1014110:intron | 45.0% |
| GAGCATTTAGCGGCTAAATG+CGG | + | chr7_1:21974582-21974601 | Msa1014110:CDS | 45.0% | |
| CGAGGAGTTCATACCAACAT+TGG | + | chr7_1:21974635-21974654 | Msa1014110:CDS | 45.0% | |
| CCTTGTTCTCCTTCCAATGT+TGG | - | chr7_1:21974651-21974670 | None:intergenic | 45.0% | |
| CCAACATTGGAAGGAGAACA+AGG | + | chr7_1:21974648-21974667 | Msa1014110:CDS | 45.0% | |
| TTGGACTGAGAATTCTCACC+TGG | - | chr7_1:21974702-21974721 | None:intergenic | 45.0% | |
| CATTTGTGAAGACAGTCCCA+TGG | + | chr7_1:21974888-21974907 | Msa1014110:intron | 45.0% | |
| !! | GTTCTAGTTTGAAGGGGGAA+CGG | - | chr7_1:21975347-21975366 | None:intergenic | 45.0% |
| ! | GGTACTCTTTGTTGATGGGA+CGG | + | chr7_1:21975506-21975525 | Msa1014110:intron | 45.0% |
| CCAGTCAGATTTGTAGGACT+TGG | - | chr7_1:21975992-21976011 | None:intergenic | 45.0% | |
| CCAAGTCCTACAAATCTGAC+TGG | + | chr7_1:21975989-21976008 | Msa1014110:CDS | 45.0% | |
| ! | GGATTTGGAGGATTTGGGTT+TGG | - | chr7_1:21976168-21976187 | None:intergenic | 45.0% |
| ! | TTCACTGTTGCCATTTGCAG+AGG | + | chr7_1:21976233-21976252 | Msa1014110:CDS | 45.0% |
| TACAACTTTGCATGGTTGGC+TGG | + | chr7_1:21976786-21976805 | Msa1014110:CDS | 45.0% | |
| TGCCCCGCAATTTGATATTC+AGG | + | chr7_1:21976821-21976840 | Msa1014110:CDS | 45.0% | |
| CACATTCAACTCTGCATGGT+TGG | + | chr7_1:21976854-21976873 | Msa1014110:CDS | 45.0% | |
| AAGATCACGACAACTCTGCA+TGG | + | chr7_1:21976913-21976932 | Msa1014110:CDS | 45.0% | |
| CACAAACAACTCTGCATGGT+TGG | + | chr7_1:21976989-21977008 | Msa1014110:CDS | 45.0% | |
| ! | AAATTCGGAATATGCCGGCT+TGG | + | chr7_1:21977034-21977053 | Msa1014110:CDS | 45.0% |
| TGAAACTTCAACTGCTGTCC+TGG | + | chr7_1:21977181-21977200 | Msa1014110:CDS | 45.0% | |
| TGTCCTGGATACACTGGAAT+TGG | + | chr7_1:21977196-21977215 | Msa1014110:CDS | 45.0% | |
| ACCGAAAGATCATACTCTGG+AGG | - | chr7_1:21977227-21977246 | None:intergenic | 45.0% | |
| TCTCAAGACGACAGTATCCT+TGG | + | chr7_1:21977355-21977374 | Msa1014110:CDS | 45.0% | |
| ATAGCCCACCTATCAAACCA+AGG | - | chr7_1:21977375-21977394 | None:intergenic | 45.0% | |
| !! | GTTTGATAGGTGGGCTATGA+GGG | + | chr7_1:21977377-21977396 | Msa1014110:CDS | 45.0% |
| !! | TTTGATAGGTGGGCTATGAG+GGG | + | chr7_1:21977378-21977397 | Msa1014110:exon | 45.0% |
| TTCTCCGAAACCCGAGAAAC+TGG | - | chr7_1:21973338-21973357 | None:intergenic | 50.0% | |
| TTCTCGGGTTTCGGAGAATG+TGG | + | chr7_1:21973340-21973359 | Msa1014110:intron | 50.0% | |
| !! | CGGAGAATGTGGTGTTGTGT+AGG | + | chr7_1:21973351-21973370 | Msa1014110:intron | 50.0% |
| TGCGACCGTGTAGCAATCTT+TGG | - | chr7_1:21973788-21973807 | None:intergenic | 50.0% | |
| !! | TAGGTTTCTAGTGAGTGGCC+TGG | + | chr7_1:21974513-21974532 | Msa1014110:intron | 50.0% |
| TTAGCGGCTAAATGCGGTGT+TGG | + | chr7_1:21974588-21974607 | Msa1014110:CDS | 50.0% | |
| TAGCGGCTAAATGCGGTGTT+GGG | + | chr7_1:21974589-21974608 | Msa1014110:CDS | 50.0% | |
| AAGGGATGGTCTCTAGTCTG+TGG | + | chr7_1:21975112-21975131 | Msa1014110:intron | 50.0% | |
| CTTCTGCACACAGCACACAA+TGG | + | chr7_1:21975182-21975201 | Msa1014110:intron | 50.0% | |
| ! | ACTCTTTGTTGATGGGACGG+AGG | + | chr7_1:21975509-21975528 | Msa1014110:intron | 50.0% |
| CGCCGAAAGATTCATCATCG+TGG | + | chr7_1:21975847-21975866 | Msa1014110:CDS | 50.0% | |
| CAACTGAAGACCATGTACGC+TGG | + | chr7_1:21975872-21975891 | Msa1014110:CDS | 50.0% | |
| CGTCTTCATCAGTCCCTAGA+TGG | - | chr7_1:21976029-21976048 | None:intergenic | 50.0% | |
| ! | GGATTTGGGTTTGGAGTCCT+TGG | - | chr7_1:21976159-21976178 | None:intergenic | 50.0% |
| ! | GCGGTGGATTTGGAGGATTT+GGG | - | chr7_1:21976173-21976192 | None:intergenic | 50.0% |
| ! | TTTCCTGTACGCGGTGGATT+TGG | - | chr7_1:21976183-21976202 | None:intergenic | 50.0% |
| ! | ACACATTTTCCTGTACGCGG+TGG | - | chr7_1:21976189-21976208 | None:intergenic | 50.0% |
| ! | ATGGTTGGCTGGTGAATCAC+AGG | + | chr7_1:21976797-21976816 | Msa1014110:CDS | 50.0% |
| TTCAACTCTGCATGGTTGGC+TGG | + | chr7_1:21976858-21976877 | Msa1014110:CDS | 50.0% | |
| ! | ATGGTTGGCTGGTGAATCAC+AGG | + | chr7_1:21976797-21976816 | Msa1014110:CDS | 50.0% |
| TCACGACAACTCTGCATGGT+TGG | + | chr7_1:21976917-21976936 | Msa1014110:CDS | 50.0% | |
| AACAACTCTGCATGGTTGGC+TGG | + | chr7_1:21976993-21977012 | Msa1014110:CDS | 50.0% | |
| ! | ATGGTTGGCTGGTGAATCAC+AGG | + | chr7_1:21976797-21976816 | Msa1014110:CDS | 50.0% |
| AACTGCTGTCCTGGATACAC+TGG | + | chr7_1:21977190-21977209 | Msa1014110:CDS | 50.0% | |
| !! | GGTTTGATAGGTGGGCTATG+AGG | + | chr7_1:21977376-21977395 | Msa1014110:CDS | 50.0% |
| GTGTAGGCTAGGGTGTGACA+TGG | + | chr7_1:21973367-21973386 | Msa1014110:intron | 55.0% | |
| TGTGATCGCGATATAGGCCG+CGG | + | chr7_1:21973680-21973699 | Msa1014110:intron | 55.0% | |
| CGATATAGGCCGCGGCATTA+GGG | + | chr7_1:21973688-21973707 | Msa1014110:intron | 55.0% | |
| TTTATGCCGAGGGGAAAGCC+AGG | - | chr7_1:21974534-21974553 | None:intergenic | 55.0% | |
| ! | CAGTCTTGTGCCAGCGTACA+TGG | - | chr7_1:21975885-21975904 | None:intergenic | 55.0% |
| CATGTACGCTGGCACAAGAC+TGG | + | chr7_1:21975883-21975902 | Msa1014110:CDS | 55.0% | |
| ! | CGCGGTGGATTTGGAGGATT+TGG | - | chr7_1:21976174-21976193 | None:intergenic | 55.0% |
| GACAACTCTGCATGGTTGGC+CGG | + | chr7_1:21976921-21976940 | Msa1014110:CDS | 55.0% | |
| GGCTGGTGAATCACAGGCTA+TGG | + | chr7_1:21977010-21977029 | Msa1014110:CDS | 55.0% | |
| GCGATATAGGCCGCGGCATT+AGG | + | chr7_1:21973687-21973706 | Msa1014110:intron | 60.0% | |
| ! | CCTGTACGCGGTGGATTTGG+AGG | - | chr7_1:21976180-21976199 | None:intergenic | 60.0% |
| CCTCCAAATCCACCGCGTAC+AGG | + | chr7_1:21976177-21976196 | Msa1014110:CDS | 60.0% | |
| CAGGGCAGCTTGCGATTCAC+CGG | - | chr7_1:21976943-21976962 | None:intergenic | 60.0% | |
| ! | GAGTGGCCTGGCTTTCCCCT+CGG | + | chr7_1:21974525-21974544 | Msa1014110:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 21972972 | 21977707 | 21972972 | ID=Msa1014110;Name=Msa1014110 |
| chr7_1 | mRNA | 21972972 | 21977707 | 21972972 | ID=Msa1014110-mRNA-1;Parent=Msa1014110;Name=Msa1014110-mRNA-1;_AED=0.04;_eAED=0.04;_QI=119|1|0.83|1|1|1|6|311|463 |
| chr7_1 | exon | 21972972 | 21973098 | 21972972 | ID=Msa1014110-mRNA-1:exon:5224;Parent=Msa1014110-mRNA-1 |
| chr7_1 | exon | 21974072 | 21974204 | 21974072 | ID=Msa1014110-mRNA-1:exon:5225;Parent=Msa1014110-mRNA-1 |
| chr7_1 | exon | 21974516 | 21974702 | 21974516 | ID=Msa1014110-mRNA-1:exon:5226;Parent=Msa1014110-mRNA-1 |
| chr7_1 | exon | 21975773 | 21976254 | 21975773 | ID=Msa1014110-mRNA-1:exon:5227;Parent=Msa1014110-mRNA-1 |
| chr7_1 | exon | 21976720 | 21977244 | 21976720 | ID=Msa1014110-mRNA-1:exon:5228;Parent=Msa1014110-mRNA-1 |
| chr7_1 | exon | 21977340 | 21977707 | 21977340 | ID=Msa1014110-mRNA-1:exon:5229;Parent=Msa1014110-mRNA-1 |
| chr7_1 | five_prime_UTR | 21972972 | 21973090 | 21972972 | ID=Msa1014110-mRNA-1:five_prime_utr;Parent=Msa1014110-mRNA-1 |
| chr7_1 | CDS | 21973091 | 21973098 | 21973091 | ID=Msa1014110-mRNA-1:cds;Parent=Msa1014110-mRNA-1 |
| chr7_1 | CDS | 21974072 | 21974204 | 21974072 | ID=Msa1014110-mRNA-1:cds;Parent=Msa1014110-mRNA-1 |
| chr7_1 | CDS | 21974516 | 21974702 | 21974516 | ID=Msa1014110-mRNA-1:cds;Parent=Msa1014110-mRNA-1 |
| chr7_1 | CDS | 21975773 | 21976254 | 21975773 | ID=Msa1014110-mRNA-1:cds;Parent=Msa1014110-mRNA-1 |
| chr7_1 | CDS | 21976720 | 21977244 | 21976720 | ID=Msa1014110-mRNA-1:cds;Parent=Msa1014110-mRNA-1 |
| chr7_1 | CDS | 21977340 | 21977396 | 21977340 | ID=Msa1014110-mRNA-1:cds;Parent=Msa1014110-mRNA-1 |
| chr7_1 | three_prime_UTR | 21977397 | 21977707 | 21977397 | ID=Msa1014110-mRNA-1:three_prime_utr;Parent=Msa1014110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
