Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014300 | XP_004516127.1 | 78.736 | 348 | 38 | 1 | 1 | 312 | 1 | 348 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014300 | sp|P52425|GPDA_CUPLA | 71.512 | 344 | 62 | 1 | 2 | 309 | 23 | 366 | 1.01e-180 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014300 | G7L5E8 | 87.032 | 347 | 9 | 1 | 1 | 311 | 1 | 347 | 0.0 | 604 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1014300 | Msa1055290 | 0.823957 | 1.046788e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014300 | MtrunA17_Chr6g0458181 | 73.487 | 347 | 56 | 1 | 2 | 312 | 29 | 375 | 0.0 | 527 |
| Msa1014300 | MtrunA17_Chr7g0226541 | 83.712 | 264 | 9 | 1 | 82 | 311 | 6 | 269 | 1.54e-156 | 438 |
| Msa1014300 | MtrunA17_Chr7g0226531 | 97.826 | 46 | 1 | 0 | 36 | 81 | 1 | 46 | 8.01e-26 | 97.4 |
| Msa1014300 | MtrunA17_Chr5g0428311 | 26.724 | 348 | 188 | 13 | 2 | 306 | 121 | 444 | 2.29e-19 | 88.2 |
| Msa1014300 | MtrunA17_Chr7g0226521 | 96.774 | 31 | 1 | 0 | 1 | 31 | 1 | 31 | 8.88e-14 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014300 | AT5G40610.1 | 70.674 | 341 | 64 | 1 | 2 | 306 | 55 | 395 | 1.53e-175 | 491 |
| Msa1014300 | AT2G40690.3 | 28.080 | 349 | 184 | 12 | 3 | 308 | 89 | 413 | 2.73e-21 | 94.0 |
| Msa1014300 | AT2G40690.1 | 28.080 | 349 | 184 | 12 | 3 | 308 | 89 | 413 | 2.73e-21 | 94.0 |
| Msa1014300 | AT2G40690.2 | 28.428 | 299 | 158 | 10 | 53 | 308 | 27 | 312 | 9.16e-20 | 88.2 |
Find 89 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACAGCTGCTCAACATTT+TGG | 0.082335 | 7_1:-22798284 | None:intergenic |
| ATGTATGTACCTGCAATTTC+TGG | 0.151006 | 7_1:-22797462 | None:intergenic |
| GAAGGGATTTCTCTTGTAAA+AGG | 0.204432 | 7_1:+22795589 | Msa1014300:CDS |
| AGCTACCTCATTTGCTATAT+TGG | 0.240667 | 7_1:-22795698 | None:intergenic |
| GTTAAACACATTATTTGTTT+TGG | 0.252934 | 7_1:+22798072 | Msa1014300:three_prime_UTR |
| GAATTAGAGAATACAGAAAA+AGG | 0.284818 | 7_1:+22798400 | Msa1014300:three_prime_UTR |
| ACAATTGATTCTCAATTGAT+TGG | 0.326950 | 7_1:-22795659 | None:intergenic |
| ACTAATTTATGAAGGAAGTT+TGG | 0.331664 | 7_1:-22798323 | None:intergenic |
| CACAGGTTTGATTGATGGCT+TGG | 0.334854 | 7_1:+22796654 | Msa1014300:intron |
| AATTAACATCGTCATGAATA+AGG | 0.334896 | 7_1:+22793342 | None:intergenic |
| TACACCACAGCTCTCGAAAA+AGG | 0.341075 | 7_1:-22796865 | None:intergenic |
| CAATTGTTGGTAGTGGCAAT+TGG | 0.348947 | 7_1:+22793368 | Msa1014300:CDS |
| AAAGGCTTGATGGGAAAATA+AGG | 0.364008 | 7_1:+22795557 | Msa1014300:CDS |
| AATTGTTGGTAGTGGCAATT+GGG | 0.390476 | 7_1:+22793369 | Msa1014300:CDS |
| TCGCACACAGGTTTGATTGA+TGG | 0.392493 | 7_1:+22796649 | Msa1014300:intron |
| TTTGAGGAAACTTTACCAAA+TGG | 0.412508 | 7_1:+22794853 | Msa1014300:CDS |
| TTGAGGAAACTTTACCAAAT+GGG | 0.415405 | 7_1:+22794854 | Msa1014300:CDS |
| TGTAACACCACATCAATTCA+TGG | 0.415581 | 7_1:+22795522 | Msa1014300:CDS |
| CTTGAAGCAGAGTTGCTTGA+AGG | 0.422032 | 7_1:+22797439 | Msa1014300:CDS |
| AGTGAGGATGTGGGTATTTG+AGG | 0.429270 | 7_1:+22794837 | Msa1014300:CDS |
| ATGAATAAGGTCACAATTGT+TGG | 0.434784 | 7_1:+22793355 | Msa1014300:CDS |
| AACTGCAAAAGAGGTTTATG+AGG | 0.435552 | 7_1:+22797770 | Msa1014300:CDS |
| GGAATATGCAAAAGGCTTGA+TGG | 0.438746 | 7_1:+22795547 | Msa1014300:CDS |
| TCTGTGAGCTTATCCCCATT+TGG | 0.439144 | 7_1:-22794868 | None:intergenic |
| TAGTCTGCAATAATGAGAAT+TGG | 0.445774 | 7_1:+22796786 | Msa1014300:intron |
| GCTTGAAGGCCAGAAATTGC+AGG | 0.453051 | 7_1:+22797453 | Msa1014300:CDS |
| TCAAAATGTAGTTGCAGATC+CGG | 0.467972 | 7_1:+22795045 | Msa1014300:CDS |
| GGAGATTAAAGTAGAGATCA+TGG | 0.470833 | 7_1:-22795638 | None:intergenic |
| TTGATTGATGGCTTGGAGAT+GGG | 0.470990 | 7_1:+22796661 | Msa1014300:CDS |
| CCTTACTGCATGTTGTGATA+AGG | 0.475651 | 7_1:-22796893 | None:intergenic |
| TTCAAAGCTGTTGTTTCCAT+CGG | 0.476460 | 7_1:+22796830 | Msa1014300:CDS |
| GCTGCAGCTTATGCAAGAAA+TGG | 0.476975 | 7_1:+22797027 | Msa1014300:CDS |
| AAGGGATTTCTCTTGTAAAA+GGG | 0.481332 | 7_1:+22795590 | Msa1014300:CDS |
| ATATAGGTTCAGGATGTTGA+AGG | 0.485928 | 7_1:+22796329 | Msa1014300:intron |
| CCATTACGAATGAATGTCAT+TGG | 0.487953 | 7_1:+22798127 | Msa1014300:three_prime_UTR |
| GGGTGTGTTAACTGCAAAAG+AGG | 0.493588 | 7_1:+22797761 | Msa1014300:intron |
| GAATATGCAAAAGGCTTGAT+GGG | 0.496782 | 7_1:+22795548 | Msa1014300:CDS |
| CACGATCTCTGAGGCTTCCA+CGG | 0.498607 | 7_1:-22797930 | None:intergenic |
| ATTACTGAGCTTGATGGTGT+TGG | 0.499880 | 7_1:-22793419 | None:intergenic |
| AATATAGTGGCTGTAGCTGC+AGG | 0.499969 | 7_1:+22796377 | Msa1014300:CDS |
| ACAGTGTACGAAATCAGTTC+AGG | 0.502109 | 7_1:+22797837 | Msa1014300:CDS |
| AAGGTCACAATTGTTGGTAG+TGG | 0.519310 | 7_1:+22793361 | Msa1014300:CDS |
| TTTGATTGATGGCTTGGAGA+TGG | 0.522422 | 7_1:+22796660 | Msa1014300:CDS |
| TCATGGAAGGAATATGCAAA+AGG | 0.529586 | 7_1:+22795539 | Msa1014300:CDS |
| CCAATGACATTCATTCGTAA+TGG | 0.531029 | 7_1:-22798127 | None:intergenic |
| ATGCAAGAAATGGCGGAAAG+AGG | 0.532788 | 7_1:+22797037 | Msa1014300:CDS |
| GGCTATCAAGAACCACTAGC+AGG | 0.532913 | 7_1:+22798148 | Msa1014300:three_prime_UTR |
| TATAGGTTCAGGATGTTGAA+GGG | 0.536846 | 7_1:+22796330 | Msa1014300:intron |
| GTGGAAATTACTGAGCTTGA+TGG | 0.538573 | 7_1:-22793425 | None:intergenic |
| ATAGGTTCAGGATGTTGAAG+GGG | 0.542031 | 7_1:+22796331 | Msa1014300:intron |
| TGAGGAAACTTTACCAAATG+GGG | 0.545249 | 7_1:+22794855 | Msa1014300:CDS |
| GAACAGATGAAGTGAGGATG+TGG | 0.552784 | 7_1:+22794827 | Msa1014300:intron |
| AGCTGTGCTATTTCTAGCGA+AGG | 0.553618 | 7_1:-22798247 | None:intergenic |
| AAGGTACTGTTCTTGACCGA+TGG | 0.556432 | 7_1:-22796846 | None:intergenic |
| TAATGTAAACTAATTTATGA+AGG | 0.560560 | 7_1:-22798331 | None:intergenic |
| GGTTCTAACCGCTCGCGGAT+GGG | 0.562201 | 7_1:+22797791 | Msa1014300:CDS |
| TCGTACACTGTTGTGAAGAG+TGG | 0.562292 | 7_1:-22797825 | None:intergenic |
| GATTTCTCTTGTAAAAGGGA+TGG | 0.566375 | 7_1:+22795594 | Msa1014300:CDS |
| AATTGGTCTGAAAGAGATGA+TGG | 0.566513 | 7_1:+22796803 | Msa1014300:CDS |
| CAACTATAGCTGATGGTGGA+AGG | 0.570703 | 7_1:-22797863 | None:intergenic |
| GGGATGGAGGTCAAGAAAGA+AGG | 0.573984 | 7_1:+22795610 | Msa1014300:CDS |
| GATCCGGACCTTGAAAATGC+AGG | 0.577471 | 7_1:+22795061 | Msa1014300:CDS |
| GTTGGATGCAACAAGCTTTG+CGG | 0.578402 | 7_1:-22793401 | None:intergenic |
| TATCTCCCCGGAGTCAAGCT+AGG | 0.579382 | 7_1:+22795022 | Msa1014300:CDS |
| CTGTTTCCTGCATGTTGCAG+TGG | 0.580469 | 7_1:-22798034 | None:intergenic |
| AGTTAAGGATGCAAACATGC+TGG | 0.582609 | 7_1:+22795495 | Msa1014300:intron |
| AAAATAAGGACAGATTCAGA+AGG | 0.587625 | 7_1:+22795571 | Msa1014300:CDS |
| TTCTCTTGTAAAAGGGATGG+AGG | 0.590741 | 7_1:+22795597 | Msa1014300:CDS |
| TATGAGGTTCTAACCGCTCG+CGG | 0.598782 | 7_1:+22797786 | Msa1014300:CDS |
| CGTGGAAGCCTCAGAGATCG+TGG | 0.620253 | 7_1:+22797931 | Msa1014300:three_prime_UTR |
| AACAGATGAAGTGAGGATGT+GGG | 0.620446 | 7_1:+22794828 | Msa1014300:intron |
| ATTATATAATTGAAGCTCAG+AGG | 0.622461 | 7_1:+22797966 | Msa1014300:three_prime_UTR |
| ACACCACATCAATTCATGGA+AGG | 0.623608 | 7_1:+22795526 | Msa1014300:CDS |
| TTGAATTCAACTATAGCTGA+TGG | 0.625078 | 7_1:-22797870 | None:intergenic |
| GAAAATGTTAAGTATCTCCC+CGG | 0.628065 | 7_1:+22795010 | Msa1014300:CDS |
| AATTCAACTATAGCTGATGG+TGG | 0.631832 | 7_1:-22797867 | None:intergenic |
| GTTGAAGGGGTTGAAATGTG+TGG | 0.634023 | 7_1:+22796344 | Msa1014300:CDS |
| ATTCCTTCCATGAATTGATG+TGG | 0.634753 | 7_1:-22795529 | None:intergenic |
| ATCAAGCTCAGTAATTTCCA+CGG | 0.635426 | 7_1:+22793427 | Msa1014300:CDS |
| GTGTGGAAACAGCCTGCTAG+TGG | 0.636779 | 7_1:-22798160 | None:intergenic |
| ATTGTTGGTAGTGGCAATTG+GGG | 0.639341 | 7_1:+22793370 | Msa1014300:CDS |
| GCAGCTTATGCAAGAAATGG+CGG | 0.641638 | 7_1:+22797030 | Msa1014300:CDS |
| AAATAAGGACAGATTCAGAA+GGG | 0.645383 | 7_1:+22795572 | Msa1014300:CDS |
| GCAGTGGAAAATGTGTGACT+TGG | 0.666084 | 7_1:-22798018 | None:intergenic |
| TGTACATTAATGATCATCCG+TGG | 0.668360 | 7_1:+22797913 | Msa1014300:three_prime_UTR |
| CCGAGTCGCCACGATCTCTG+AGG | 0.673046 | 7_1:-22797939 | None:intergenic |
| TTTGACCTAGCTTGACTCCG+GGG | 0.673538 | 7_1:-22795027 | None:intergenic |
| ATATATGAACAGATGAAGTG+AGG | 0.697688 | 7_1:+22794821 | Msa1014300:intron |
| GACAGCGAATTAAATCATCG+CGG | 0.780070 | 7_1:+22798104 | Msa1014300:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTGTTTAAATTTTTTCA+CGG | - | chr7_1:22796157-22796176 | None:intergenic | 10.0% |
| !!! | TATACATTTTGATAAATTGA+GGG | - | chr7_1:22793549-22793568 | None:intergenic | 15.0% |
| !!! | ATATACATTTTGATAAATTG+AGG | - | chr7_1:22793550-22793569 | None:intergenic | 15.0% |
| !!! | TATATAGTACATATTTCTAT+CGG | - | chr7_1:22794324-22794343 | None:intergenic | 15.0% |
| !! | TAAATAATCAATGAAATACA+AGG | - | chr7_1:22795765-22795784 | None:intergenic | 15.0% |
| !! | TTGCATTTATTATTTGATAT+AGG | + | chr7_1:22796313-22796332 | Msa1014300:intron | 15.0% |
| !! | CAATAAAAAACAAAAATGAA+GGG | - | chr7_1:22796748-22796767 | None:intergenic | 15.0% |
| !! | ACAATAAAAAACAAAAATGA+AGG | - | chr7_1:22796749-22796768 | None:intergenic | 15.0% |
| !!! | TCATTTTTGTTTTTTATTGT+TGG | + | chr7_1:22796749-22796768 | Msa1014300:intron | 15.0% |
| !! | ATTATGATAAATACAAAAAG+TGG | + | chr7_1:22797562-22797581 | Msa1014300:intron | 15.0% |
| !! | TAATGTAAACTAATTTATGA+AGG | - | chr7_1:22798334-22798353 | None:intergenic | 15.0% |
| !!! | ACTTTATTTTTTATTTGAGC+AGG | + | chr7_1:22793463-22793482 | Msa1014300:intron | 20.0% |
| !!! | CTTTATTTTTTATTTGAGCA+GGG | + | chr7_1:22793464-22793483 | Msa1014300:intron | 20.0% |
| !!! | ATACATTTTGATAAATTGAG+GGG | - | chr7_1:22793548-22793567 | None:intergenic | 20.0% |
| !!! | AAAAGTTGTTTGATTTTGTT+AGG | + | chr7_1:22793712-22793731 | Msa1014300:intron | 20.0% |
| !! | TTTATATAGTTACTGTTTGA+GGG | - | chr7_1:22794750-22794769 | None:intergenic | 20.0% |
| !!! | TTTTATATAGTTACTGTTTG+AGG | - | chr7_1:22794751-22794770 | None:intergenic | 20.0% |
| !! | TCCAAACATATCATTAAAAT+GGG | - | chr7_1:22794802-22794821 | None:intergenic | 20.0% |
| !! | ATCCAAACATATCATTAAAA+TGG | - | chr7_1:22794803-22794822 | None:intergenic | 20.0% |
| !! | TTAATAATAACTGTTCTTCA+TGG | + | chr7_1:22794984-22795003 | Msa1014300:intron | 20.0% |
| !!! | AATTTTAACCTTTCGTTTTT+TGG | + | chr7_1:22795170-22795189 | Msa1014300:intron | 20.0% |
| !!! | ATTTTAACCTTTCGTTTTTT+GGG | + | chr7_1:22795171-22795190 | Msa1014300:intron | 20.0% |
| !! | AATGGTGAAATATATAGTTA+AGG | + | chr7_1:22795480-22795499 | Msa1014300:intron | 20.0% |
| !!! | AATCAATTGTTCTGTTTTAA+TGG | + | chr7_1:22795672-22795691 | Msa1014300:CDS | 20.0% |
| !!! | ATCAATTGTTCTGTTTTAAT+GGG | + | chr7_1:22795673-22795692 | Msa1014300:CDS | 20.0% |
| !! | CAATCTGTCAAAAAAAAAAA+AGG | - | chr7_1:22795793-22795812 | None:intergenic | 20.0% |
| !! | TTAAAGTTTCGATACATTTA+AGG | - | chr7_1:22795973-22795992 | None:intergenic | 20.0% |
| !!! | AAACCATGAATTAGATATTT+TGG | + | chr7_1:22796220-22796239 | Msa1014300:intron | 20.0% |
| !! | AAACCAAAATATCTAATTCA+TGG | - | chr7_1:22796226-22796245 | None:intergenic | 20.0% |
| !!! | TGAATTAGATATTTTGGTTT+TGG | + | chr7_1:22796226-22796245 | Msa1014300:intron | 20.0% |
| !! | TTATTATTTGATATAGGTTC+AGG | + | chr7_1:22796319-22796338 | Msa1014300:intron | 20.0% |
| !! | ATTAACTTAGATGTTACAAT+TGG | + | chr7_1:22796517-22796536 | Msa1014300:intron | 20.0% |
| !!! | AAGGATTAAAACAACAATTT+TGG | - | chr7_1:22796929-22796948 | None:intergenic | 20.0% |
| !!! | ATCCTTCATTTTTTTCTTAT+TGG | + | chr7_1:22796943-22796962 | Msa1014300:intron | 20.0% |
| !! | AACCAATAAGAAAAAAATGA+AGG | - | chr7_1:22796948-22796967 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTATTGGTTATCT+TGG | + | chr7_1:22796952-22796971 | Msa1014300:intron | 20.0% |
| !! | GACTATAACAATATTATTTG+TGG | + | chr7_1:22796978-22796997 | Msa1014300:intron | 20.0% |
| !!! | TACAGTTTTAAAACATTGAT+TGG | + | chr7_1:22797340-22797359 | Msa1014300:intron | 20.0% |
| !!! | ACAGTTTTAAAACATTGATT+GGG | + | chr7_1:22797341-22797360 | Msa1014300:intron | 20.0% |
| !!! | GTTAAACACATTATTTGTTT+TGG | + | chr7_1:22798072-22798091 | Msa1014300:three_prime_UTR | 20.0% |
| !! | GAAAAAAGATGGATAAATAA+GGG | - | chr7_1:22798379-22798398 | None:intergenic | 20.0% |
| !! | AGAAAAAAGATGGATAAATA+AGG | - | chr7_1:22798380-22798399 | None:intergenic | 20.0% |
| !!! | GCTTTTGAGAAAATTATGAT+GGG | - | chr7_1:22793526-22793545 | None:intergenic | 25.0% |
| ! | TATCAAAATGTATATTCCGA+TGG | + | chr7_1:22793555-22793574 | Msa1014300:intron | 25.0% |
| !! | TCTTTTGATCAGTCTTTTTT+AGG | + | chr7_1:22793600-22793619 | Msa1014300:intron | 25.0% |
| !!! | CTTTTGATCAGTCTTTTTTA+GGG | + | chr7_1:22793601-22793620 | Msa1014300:intron | 25.0% |
| !!! | TTTTGATCAGTCTTTTTTAG+GGG | + | chr7_1:22793602-22793621 | Msa1014300:intron | 25.0% |
| !! | GATTTTGTTAGGAAAATGAT+AGG | + | chr7_1:22793723-22793742 | Msa1014300:intron | 25.0% |
| !!! | TGATAGGTTCTAAATAAATG+TGG | + | chr7_1:22793739-22793758 | Msa1014300:intron | 25.0% |
| ! | ACAATACACAATGAGAAAAA+AGG | - | chr7_1:22793827-22793846 | None:intergenic | 25.0% |
| !! | TTTTGTACCATAGATAGAAT+TGG | - | chr7_1:22793934-22793953 | None:intergenic | 25.0% |
| ! | GTCAAGATATGCATTATATT+CGG | + | chr7_1:22794234-22794253 | Msa1014300:intron | 25.0% |
| ! | CTTCTTACATTTCATAAACA+TGG | + | chr7_1:22794400-22794419 | Msa1014300:intron | 25.0% |
| ! | AACAAAGATGATTAATTGCA+TGG | + | chr7_1:22794678-22794697 | Msa1014300:intron | 25.0% |
| !!! | TCCCATTTTAATGATATGTT+TGG | + | chr7_1:22794798-22794817 | Msa1014300:intron | 25.0% |
| ! | TCATCAAAAAAACCAATGTA+AGG | + | chr7_1:22794893-22794912 | Msa1014300:intron | 25.0% |
| ! | GAATATATTGCATATGCAAT+TGG | - | chr7_1:22794938-22794957 | None:intergenic | 25.0% |
| ! | GGTTATTTATTACACATTCA+GGG | - | chr7_1:22795215-22795234 | None:intergenic | 25.0% |
| ! | TGGTTATTTATTACACATTC+AGG | - | chr7_1:22795216-22795235 | None:intergenic | 25.0% |
| ! | TACATAATCAGAGACTATTT+AGG | - | chr7_1:22795265-22795284 | None:intergenic | 25.0% |
| !! | ACAATTGATTCTCAATTGAT+TGG | - | chr7_1:22795662-22795681 | None:intergenic | 25.0% |
| !!! | TCAATTGTTCTGTTTTAATG+GGG | + | chr7_1:22795674-22795693 | Msa1014300:CDS | 25.0% |
| ! | TTACTAATAGAAGACATGTT+CGG | - | chr7_1:22796004-22796023 | None:intergenic | 25.0% |
| ! | ACTAACATAAAACACATTTG+AGG | + | chr7_1:22796060-22796079 | Msa1014300:intron | 25.0% |
| ! | ATGAATCAATTGTAACATCT+AGG | + | chr7_1:22796453-22796472 | Msa1014300:intron | 25.0% |
| ! | GAAAATAAATGGTATATGGT+TGG | - | chr7_1:22796722-22796741 | None:intergenic | 25.0% |
| ! | GTGAGAAAATAAATGGTATA+TGG | - | chr7_1:22796726-22796745 | None:intergenic | 25.0% |
| ! | AAAGAAACACAGAAATCAAA+TGG | - | chr7_1:22797397-22797416 | None:intergenic | 25.0% |
| ! | CATTTAATGTTTCATACAGT+AGG | - | chr7_1:22797492-22797511 | None:intergenic | 25.0% |
| ! | ACACATTTGAATTTATGTCA+GGG | - | chr7_1:22797529-22797548 | None:intergenic | 25.0% |
| ! | TACACATTTGAATTTATGTC+AGG | - | chr7_1:22797530-22797549 | None:intergenic | 25.0% |
| ! | AATACAAAAAGTGGCAAATA+AGG | + | chr7_1:22797571-22797590 | Msa1014300:intron | 25.0% |
| ! | TTTACTTTGAGCATATAATC+TGG | - | chr7_1:22797636-22797655 | None:intergenic | 25.0% |
| ! | ATATGCTCAAAGTAAAACAT+AGG | + | chr7_1:22797640-22797659 | Msa1014300:intron | 25.0% |
| ! | ATTATATAATTGAAGCTCAG+AGG | + | chr7_1:22797966-22797985 | Msa1014300:three_prime_UTR | 25.0% |
| ! | ACTAATTTATGAAGGAAGTT+TGG | - | chr7_1:22798326-22798345 | None:intergenic | 25.0% |
| ! | TCTCTAATTCAGAAAAAAGA+TGG | - | chr7_1:22798390-22798409 | None:intergenic | 25.0% |
| ! | GAATTAGAGAATACAGAAAA+AGG | + | chr7_1:22798400-22798419 | Msa1014300:three_prime_UTR | 25.0% |
| ATGAATAAGGTCACAATTGT+TGG | + | chr7_1:22793355-22793374 | Msa1014300:CDS | 30.0% | |
| TTTCATTCAAAATGCATGCA+TGG | - | chr7_1:22793490-22793509 | None:intergenic | 30.0% | |
| !! | GGCTTTTGAGAAAATTATGA+TGG | - | chr7_1:22793527-22793546 | None:intergenic | 30.0% |
| !! | AGGTTCTAAATAAATGTGGT+TGG | + | chr7_1:22793743-22793762 | Msa1014300:intron | 30.0% |
| ! | TTTGAGTTATAAGTACGACA+AGG | - | chr7_1:22793906-22793925 | None:intergenic | 30.0% |
| TCGTACTTATAACTCAAAGA+AGG | + | chr7_1:22793908-22793927 | Msa1014300:intron | 30.0% | |
| !!! | CAAGTGTCTTTTTTCAACAT+TGG | - | chr7_1:22794051-22794070 | None:intergenic | 30.0% |
| ! | TTTTTCATCTTTGTAGACCT+AGG | - | chr7_1:22794271-22794290 | None:intergenic | 30.0% |
| ! | CATTGATAGTCAATGTATGT+AGG | + | chr7_1:22794479-22794498 | Msa1014300:intron | 30.0% |
| TTTGGCCTCTTTATATAGAT+AGG | + | chr7_1:22794585-22794604 | Msa1014300:intron | 30.0% | |
| TTGGCCTCTTTATATAGATA+GGG | + | chr7_1:22794586-22794605 | Msa1014300:intron | 30.0% | |
| TCAACAATCAGAAATCACAT+TGG | - | chr7_1:22794640-22794659 | None:intergenic | 30.0% | |
| AATGTGATTTCTGATTGTTG+AGG | + | chr7_1:22794639-22794658 | Msa1014300:intron | 30.0% | |
| ! | TAATCATCTTTGTTTGCGAA+TGG | - | chr7_1:22794672-22794691 | None:intergenic | 30.0% |
| AACATGCATATGATTCCATT+GGG | - | chr7_1:22794718-22794737 | None:intergenic | 30.0% | |
| AAACATGCATATGATTCCAT+TGG | - | chr7_1:22794719-22794738 | None:intergenic | 30.0% | |
| ATATATGAACAGATGAAGTG+AGG | + | chr7_1:22794821-22794840 | Msa1014300:intron | 30.0% | |
| TTTGAGGAAACTTTACCAAA+TGG | + | chr7_1:22794853-22794872 | Msa1014300:CDS | 30.0% | |
| TTGAGGAAACTTTACCAAAT+GGG | + | chr7_1:22794854-22794873 | Msa1014300:CDS | 30.0% | |
| ! | TATTTTGCCCAAAAAACGAA+AGG | - | chr7_1:22795181-22795200 | None:intergenic | 30.0% |
| ! | TAGGAATTTTGCTACATTGA+GGG | - | chr7_1:22795246-22795265 | None:intergenic | 30.0% |
| ! | TTAGGAATTTTGCTACATTG+AGG | - | chr7_1:22795247-22795266 | None:intergenic | 30.0% |
| CTAAAATAGTCTCTGACATT+TGG | + | chr7_1:22795294-22795313 | Msa1014300:intron | 30.0% | |
| !! | ACACAAGTTGATAAGAAATG+TGG | - | chr7_1:22795451-22795470 | None:intergenic | 30.0% |
| AACTTGTGTTCTTCATTGAA+TGG | + | chr7_1:22795462-22795481 | Msa1014300:intron | 30.0% | |
| AAAATAAGGACAGATTCAGA+AGG | + | chr7_1:22795571-22795590 | Msa1014300:CDS | 30.0% | |
| AAATAAGGACAGATTCAGAA+GGG | + | chr7_1:22795572-22795591 | Msa1014300:CDS | 30.0% | |
| AAGGGATTTCTCTTGTAAAA+GGG | + | chr7_1:22795590-22795609 | Msa1014300:CDS | 30.0% | |
| !!! | CAATTGTTCTGTTTTAATGG+GGG | + | chr7_1:22795675-22795694 | Msa1014300:CDS | 30.0% |
| AAATTTAGTGAGGCAACAAT+TGG | + | chr7_1:22795821-22795840 | Msa1014300:intron | 30.0% | |
| TACTAATAGAAGACATGTTC+GGG | - | chr7_1:22796003-22796022 | None:intergenic | 30.0% | |
| TACTAGCAAAAGACTCATTT+AGG | + | chr7_1:22796091-22796110 | Msa1014300:intron | 30.0% | |
| CCAATATATAAGTACACTCA+AGG | - | chr7_1:22796259-22796278 | None:intergenic | 30.0% | |
| CCTTGAGTGTACTTATATAT+TGG | + | chr7_1:22796256-22796275 | Msa1014300:intron | 30.0% | |
| ! | TACAGCCACTATATTTTTCA+GGG | - | chr7_1:22796372-22796391 | None:intergenic | 30.0% |
| TCATAAAGACTACAAAAGAG+AGG | - | chr7_1:22796437-22796456 | None:intergenic | 30.0% | |
| ATGAAGGGTGAGAAAATAAA+TGG | - | chr7_1:22796733-22796752 | None:intergenic | 30.0% | |
| TAGTCTGCAATAATGAGAAT+TGG | + | chr7_1:22796786-22796805 | Msa1014300:intron | 30.0% | |
| AACAATATTATTTGTGGCAG+TGG | + | chr7_1:22796984-22797003 | Msa1014300:intron | 30.0% | |
| ACAATATTATTTGTGGCAGT+GGG | + | chr7_1:22796985-22797004 | Msa1014300:intron | 30.0% | |
| TCTATCTTGTACACATTACT+TGG | + | chr7_1:22797070-22797089 | Msa1014300:intron | 30.0% | |
| CTATCTTGTACACATTACTT+GGG | + | chr7_1:22797071-22797090 | Msa1014300:intron | 30.0% | |
| AAAATACAACCACTAGAAAC+CGG | - | chr7_1:22797212-22797231 | None:intergenic | 30.0% | |
| ! | TAGTTAAATTGGTTCAACCA+CGG | - | chr7_1:22797279-22797298 | None:intergenic | 30.0% |
| CATGGTTGAAGTAGTTAAAT+TGG | - | chr7_1:22797290-22797309 | None:intergenic | 30.0% | |
| ! | ACATTGATTGGGATGATAAA+AGG | + | chr7_1:22797352-22797371 | Msa1014300:intron | 30.0% |
| !!! | TCTGTGTTTCTTTTTTCTGT+AGG | + | chr7_1:22797404-22797423 | Msa1014300:intron | 30.0% |
| ! | TTCTTTTGCATGAATCATTG+TGG | - | chr7_1:22797676-22797695 | None:intergenic | 30.0% |
| GCAAGAAATTTAGATGAATG+AGG | - | chr7_1:22797736-22797755 | None:intergenic | 30.0% | |
| ATCTAAATTTCTTGCGTGAA+GGG | + | chr7_1:22797741-22797760 | Msa1014300:intron | 30.0% | |
| TTGAATTCAACTATAGCTGA+TGG | - | chr7_1:22797873-22797892 | None:intergenic | 30.0% | |
| !! | AATTGTTGGTAGTGGCAATT+GGG | + | chr7_1:22793369-22793388 | Msa1014300:CDS | 35.0% |
| ATCAAGCTCAGTAATTTCCA+CGG | + | chr7_1:22793427-22793446 | Msa1014300:CDS | 35.0% | |
| !! | AAGTAGAAGAAAAAGTACCG+TGG | - | chr7_1:22793447-22793466 | None:intergenic | 35.0% |
| AAGAAGGCCAATTCTATCTA+TGG | + | chr7_1:22793924-22793943 | Msa1014300:intron | 35.0% | |
| TGAAAAAAGACACTTGTGCA+TGG | + | chr7_1:22794055-22794074 | Msa1014300:intron | 35.0% | |
| !!! | CGTCGATTTGCATTTCTTTT+AGG | - | chr7_1:22794123-22794142 | None:intergenic | 35.0% |
| TCAATGTATGTAGGTTCAAG+TGG | + | chr7_1:22794488-22794507 | Msa1014300:intron | 35.0% | |
| ! | AATTAGTTGTTTCGAGCGTT+TGG | + | chr7_1:22794567-22794586 | Msa1014300:intron | 35.0% |
| GGTACCCTATCTATATAAAG+AGG | - | chr7_1:22794593-22794612 | None:intergenic | 35.0% | |
| TCAACTAATTACAGTGGAGT+TGG | - | chr7_1:22794614-22794633 | None:intergenic | 35.0% | |
| TGGATCTCAACTAATTACAG+TGG | - | chr7_1:22794620-22794639 | None:intergenic | 35.0% | |
| TGAGGAAACTTTACCAAATG+GGG | + | chr7_1:22794855-22794874 | Msa1014300:CDS | 35.0% | |
| ! | TGTATGACTAGTCCTTACAT+TGG | - | chr7_1:22794908-22794927 | None:intergenic | 35.0% |
| TAATAACTGTTCTTCATGGC+AGG | + | chr7_1:22794988-22795007 | Msa1014300:intron | 35.0% | |
| GAAAATGTTAAGTATCTCCC+CGG | + | chr7_1:22795010-22795029 | Msa1014300:CDS | 35.0% | |
| TCAAAATGTAGTTGCAGATC+CGG | + | chr7_1:22795045-22795064 | Msa1014300:CDS | 35.0% | |
| ! | TACATGTACCTGCATTTTCA+AGG | - | chr7_1:22795072-22795091 | None:intergenic | 35.0% |
| CAAACTTATGCCAAACAAGT+AGG | + | chr7_1:22795135-22795154 | Msa1014300:intron | 35.0% | |
| GAAAATGAAGCCTACTTGTT+TGG | - | chr7_1:22795148-22795167 | None:intergenic | 35.0% | |
| TTTGGCACTATATTAACGAC+AGG | + | chr7_1:22795312-22795331 | Msa1014300:intron | 35.0% | |
| TGTAACACCACATCAATTCA+TGG | + | chr7_1:22795522-22795541 | Msa1014300:CDS | 35.0% | |
| ATTCCTTCCATGAATTGATG+TGG | - | chr7_1:22795532-22795551 | None:intergenic | 35.0% | |
| TCATGGAAGGAATATGCAAA+AGG | + | chr7_1:22795539-22795558 | Msa1014300:CDS | 35.0% | |
| GAATATGCAAAAGGCTTGAT+GGG | + | chr7_1:22795548-22795567 | Msa1014300:CDS | 35.0% | |
| AAAGGCTTGATGGGAAAATA+AGG | + | chr7_1:22795557-22795576 | Msa1014300:CDS | 35.0% | |
| GAAGGGATTTCTCTTGTAAA+AGG | + | chr7_1:22795589-22795608 | Msa1014300:CDS | 35.0% | |
| GATTTCTCTTGTAAAAGGGA+TGG | + | chr7_1:22795594-22795613 | Msa1014300:CDS | 35.0% | |
| GGAGATTAAAGTAGAGATCA+TGG | - | chr7_1:22795641-22795660 | None:intergenic | 35.0% | |
| !! | AGCTACCTCATTTGCTATAT+TGG | - | chr7_1:22795701-22795720 | None:intergenic | 35.0% |
| ACAGATGTCACATTGAAGTA+AGG | - | chr7_1:22795899-22795918 | None:intergenic | 35.0% | |
| ! | CTGTGAGTAGTCAATCATTT+TGG | + | chr7_1:22795915-22795934 | Msa1014300:intron | 35.0% |
| ACTAATAGAAGACATGTTCG+GGG | - | chr7_1:22796002-22796021 | None:intergenic | 35.0% | |
| ATCAAATGTGTCATCTGTTC+GGG | - | chr7_1:22796034-22796053 | None:intergenic | 35.0% | |
| CATCAAATGTGTCATCTGTT+CGG | - | chr7_1:22796035-22796054 | None:intergenic | 35.0% | |
| ! | GAGTCTTTTGCTAGTAAGTT+TGG | - | chr7_1:22796087-22796106 | None:intergenic | 35.0% |
| ATATAGGTTCAGGATGTTGA+AGG | + | chr7_1:22796329-22796348 | Msa1014300:intron | 35.0% | |
| TATAGGTTCAGGATGTTGAA+GGG | + | chr7_1:22796330-22796349 | Msa1014300:intron | 35.0% | |
| TGGAACCCTGAAAAATATAG+TGG | + | chr7_1:22796364-22796383 | Msa1014300:CDS | 35.0% | |
| ! | CTACAGCCACTATATTTTTC+AGG | - | chr7_1:22796373-22796392 | None:intergenic | 35.0% |
| GTTACAATTGGTATCAAAGC+AGG | + | chr7_1:22796529-22796548 | Msa1014300:intron | 35.0% | |
| TCAAAACTCGCAGTTTGATT+TGG | - | chr7_1:22796560-22796579 | None:intergenic | 35.0% | |
| !! | TTTTGAGTCTAGAAGTGATC+CGG | + | chr7_1:22796574-22796593 | Msa1014300:intron | 35.0% |
| ! | TTCTCATATTTTTCGCACAC+AGG | + | chr7_1:22796637-22796656 | Msa1014300:intron | 35.0% |
| ! | AATTGGTCTGAAAGAGATGA+TGG | + | chr7_1:22796803-22796822 | Msa1014300:CDS | 35.0% |
| !! | TTCAAAGCTGTTGTTTCCAT+CGG | + | chr7_1:22796830-22796849 | Msa1014300:CDS | 35.0% |
| TGAACCAAATGACATGTGAT+TGG | + | chr7_1:22797161-22797180 | Msa1014300:intron | 35.0% | |
| ! | TATGTCATTTGTTTCAACCG+TGG | + | chr7_1:22797259-22797278 | Msa1014300:intron | 35.0% |
| TAACTACTTCAACCATGATC+CGG | + | chr7_1:22797293-22797312 | Msa1014300:intron | 35.0% | |
| ATGTATGTACCTGCAATTTC+TGG | - | chr7_1:22797465-22797484 | None:intergenic | 35.0% | |
| CATCTAAATTTCTTGCGTGA+AGG | + | chr7_1:22797740-22797759 | Msa1014300:intron | 35.0% | |
| AACTGCAAAAGAGGTTTATG+AGG | + | chr7_1:22797770-22797789 | Msa1014300:CDS | 35.0% | |
| AATTCAACTATAGCTGATGG+TGG | - | chr7_1:22797870-22797889 | None:intergenic | 35.0% | |
| TGTACATTAATGATCATCCG+TGG | + | chr7_1:22797913-22797932 | Msa1014300:three_prime_UTR | 35.0% | |
| CCAATGACATTCATTCGTAA+TGG | - | chr7_1:22798130-22798149 | None:intergenic | 35.0% | |
| CCATTACGAATGAATGTCAT+TGG | + | chr7_1:22798127-22798146 | Msa1014300:three_prime_UTR | 35.0% | |
| CTGTTTCCACACACAAAAAA+CGG | + | chr7_1:22798171-22798190 | Msa1014300:three_prime_UTR | 35.0% | |
| TGTTTCCACACACAAAAAAC+GGG | + | chr7_1:22798172-22798191 | Msa1014300:three_prime_UTR | 35.0% | |
| ! | AAACAGCTGCTCAACATTTT+GGG | - | chr7_1:22798286-22798305 | None:intergenic | 35.0% |
| ! | AAAACAGCTGCTCAACATTT+TGG | - | chr7_1:22798287-22798306 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTGAGTTTGTGTA+TGG | + | chr7_1:22798298-22798317 | Msa1014300:three_prime_UTR | 35.0% |
| ! | AAGGTCACAATTGTTGGTAG+TGG | + | chr7_1:22793361-22793380 | Msa1014300:CDS | 40.0% |
| !! | CAATTGTTGGTAGTGGCAAT+TGG | + | chr7_1:22793368-22793387 | Msa1014300:CDS | 40.0% |
| !! | ATTGTTGGTAGTGGCAATTG+GGG | + | chr7_1:22793370-22793389 | Msa1014300:CDS | 40.0% |
| !! | ATTACTGAGCTTGATGGTGT+TGG | - | chr7_1:22793422-22793441 | None:intergenic | 40.0% |
| GTGGAAATTACTGAGCTTGA+TGG | - | chr7_1:22793428-22793447 | None:intergenic | 40.0% | |
| ATTCCGATGGCACAATCTAT+CGG | + | chr7_1:22793568-22793587 | Msa1014300:intron | 40.0% | |
| GAGCAAACTGAAGGAATTAG+AGG | + | chr7_1:22793627-22793646 | Msa1014300:intron | 40.0% | |
| ! | TGGTTGGTTCTTAACGATGT+CGG | + | chr7_1:22793759-22793778 | Msa1014300:intron | 40.0% |
| GAGTGAATTTCACTACCCAA+TGG | + | chr7_1:22794700-22794719 | Msa1014300:intron | 40.0% | |
| AACAGATGAAGTGAGGATGT+GGG | + | chr7_1:22794828-22794847 | Msa1014300:intron | 40.0% | |
| !! | ATTTTGACCTAGCTTGACTC+CGG | - | chr7_1:22795032-22795051 | None:intergenic | 40.0% |
| GTGCACTTCGTTAGTCAAAA+TGG | - | chr7_1:22795340-22795359 | None:intergenic | 40.0% | |
| AGTTAAGGATGCAAACATGC+TGG | + | chr7_1:22795495-22795514 | Msa1014300:intron | 40.0% | |
| ACACCACATCAATTCATGGA+AGG | + | chr7_1:22795526-22795545 | Msa1014300:CDS | 40.0% | |
| GGAATATGCAAAAGGCTTGA+TGG | + | chr7_1:22795547-22795566 | Msa1014300:CDS | 40.0% | |
| TTCTCTTGTAAAAGGGATGG+AGG | + | chr7_1:22795597-22795616 | Msa1014300:CDS | 40.0% | |
| ATAGCAAATGAGGTAGCTAG+AGG | + | chr7_1:22795703-22795722 | Msa1014300:intron | 40.0% | |
| TGCCATGCAGAAATTTAGTG+AGG | + | chr7_1:22795811-22795830 | Msa1014300:intron | 40.0% | |
| TGCCTCACTAAATTTCTGCA+TGG | - | chr7_1:22795816-22795835 | None:intergenic | 40.0% | |
| TGGTTTGAGAATGTGTGAAG+TGG | + | chr7_1:22795935-22795954 | Msa1014300:intron | 40.0% | |
| CTAATAGAAGACATGTTCGG+GGG | - | chr7_1:22796001-22796020 | None:intergenic | 40.0% | |
| TCAAATGTGTCATCTGTTCG+GGG | - | chr7_1:22796033-22796052 | None:intergenic | 40.0% | |
| ATAGGTTCAGGATGTTGAAG+GGG | + | chr7_1:22796331-22796350 | Msa1014300:intron | 40.0% | |
| AAGACTACAAAAGAGAGGAG+TGG | - | chr7_1:22796432-22796451 | None:intergenic | 40.0% | |
| CAATTGGTATCAAAGCAGGT+CGG | + | chr7_1:22796533-22796552 | Msa1014300:intron | 40.0% | |
| ! | TATGATCGACTCTCCTAAAC+CGG | - | chr7_1:22796596-22796615 | None:intergenic | 40.0% |
| ! | TTTGATTGATGGCTTGGAGA+TGG | + | chr7_1:22796660-22796679 | Msa1014300:CDS | 40.0% |
| ! | TTGATTGATGGCTTGGAGAT+GGG | + | chr7_1:22796661-22796680 | Msa1014300:CDS | 40.0% |
| CCTTACTGCATGTTGTGATA+AGG | - | chr7_1:22796896-22796915 | None:intergenic | 40.0% | |
| CCTTATCACAACATGCAGTA+AGG | + | chr7_1:22796893-22796912 | Msa1014300:intron | 40.0% | |
| ATATTATTTGTGGCAGTGGG+TGG | + | chr7_1:22796988-22797007 | Msa1014300:intron | 40.0% | |
| TCTTGTACACATTACTTGGG+TGG | + | chr7_1:22797074-22797093 | Msa1014300:intron | 40.0% | |
| AACCACAATTGGACCATGAT+TGG | + | chr7_1:22797131-22797150 | Msa1014300:intron | 40.0% | |
| ATCCAATCATGGTCCAATTG+TGG | - | chr7_1:22797136-22797155 | None:intergenic | 40.0% | |
| AATTGGACCATGATTGGATG+AGG | + | chr7_1:22797137-22797156 | Msa1014300:intron | 40.0% | |
| CGATCCAATCACATGTCATT+TGG | - | chr7_1:22797168-22797187 | None:intergenic | 40.0% | |
| AATTGAACCTGTGAAACCTC+CGG | - | chr7_1:22797315-22797334 | None:intergenic | 40.0% | |
| GACAGCGAATTAAATCATCG+CGG | + | chr7_1:22798104-22798123 | Msa1014300:three_prime_UTR | 40.0% | |
| GTTTCCACACACAAAAAACG+GGG | + | chr7_1:22798173-22798192 | Msa1014300:three_prime_UTR | 40.0% | |
| !!! | TAAACCCCGTTTTTTGTGTG+TGG | - | chr7_1:22798180-22798199 | None:intergenic | 40.0% |
| ! | AACAGCTGCTCAACATTTTG+GGG | - | chr7_1:22798285-22798304 | None:intergenic | 40.0% |
| GTTGGATGCAACAAGCTTTG+CGG | - | chr7_1:22793404-22793423 | None:intergenic | 45.0% | |
| TTCCGATGGCACAATCTATC+GGG | + | chr7_1:22793569-22793588 | Msa1014300:intron | 45.0% | |
| TTAGGGGTTGAGCAAACTGA+AGG | + | chr7_1:22793618-22793637 | Msa1014300:intron | 45.0% | |
| TAAGTACGACAAGGCCAACA+AGG | - | chr7_1:22793897-22793916 | None:intergenic | 45.0% | |
| GAACAGATGAAGTGAGGATG+TGG | + | chr7_1:22794827-22794846 | Msa1014300:intron | 45.0% | |
| AGTGAGGATGTGGGTATTTG+AGG | + | chr7_1:22794837-22794856 | Msa1014300:CDS | 45.0% | |
| TCTGTGAGCTTATCCCCATT+TGG | - | chr7_1:22794871-22794890 | None:intergenic | 45.0% | |
| ! | TTTTGACCTAGCTTGACTCC+GGG | - | chr7_1:22795031-22795050 | None:intergenic | 45.0% |
| !! | GTACCTGCATTTTCAAGGTC+CGG | - | chr7_1:22795067-22795086 | None:intergenic | 45.0% |
| GCTACATTGAGGGACTATTG+TGG | - | chr7_1:22795236-22795255 | None:intergenic | 45.0% | |
| ACTAACGAAGTGCACGATCA+TGG | + | chr7_1:22795345-22795364 | Msa1014300:intron | 45.0% | |
| ACAAAGAAGCTGCAGAGAGA+TGG | + | chr7_1:22795855-22795874 | Msa1014300:intron | 45.0% | |
| CAAAGAAGCTGCAGAGAGAT+GGG | + | chr7_1:22795856-22795875 | Msa1014300:intron | 45.0% | |
| CAAATGTGTCATCTGTTCGG+GGG | - | chr7_1:22796032-22796051 | None:intergenic | 45.0% | |
| GTTGAAGGGGTTGAAATGTG+TGG | + | chr7_1:22796344-22796363 | Msa1014300:CDS | 45.0% | |
| AATATAGTGGCTGTAGCTGC+AGG | + | chr7_1:22796377-22796396 | Msa1014300:CDS | 45.0% | |
| GTCTAGAAGTGATCCGGTTT+AGG | + | chr7_1:22796580-22796599 | Msa1014300:intron | 45.0% | |
| TCGCACACAGGTTTGATTGA+TGG | + | chr7_1:22796649-22796668 | Msa1014300:intron | 45.0% | |
| ! | CACAGGTTTGATTGATGGCT+TGG | + | chr7_1:22796654-22796673 | Msa1014300:intron | 45.0% |
| !! | AAGGTACTGTTCTTGACCGA+TGG | - | chr7_1:22796849-22796868 | None:intergenic | 45.0% |
| !!! | AGTACCTTTTTCGAGAGCTG+TGG | + | chr7_1:22796861-22796880 | Msa1014300:CDS | 45.0% |
| TACACCACAGCTCTCGAAAA+AGG | - | chr7_1:22796868-22796887 | None:intergenic | 45.0% | |
| GCTGCAGCTTATGCAAGAAA+TGG | + | chr7_1:22797027-22797046 | Msa1014300:CDS | 45.0% | |
| GCAGCTTATGCAAGAAATGG+CGG | + | chr7_1:22797030-22797049 | Msa1014300:CDS | 45.0% | |
| ! | ATGCAAGAAATGGCGGAAAG+AGG | + | chr7_1:22797037-22797056 | Msa1014300:CDS | 45.0% |
| GGTTCAACCTCATCCAATCA+TGG | - | chr7_1:22797147-22797166 | None:intergenic | 45.0% | |
| TGGATCGATTGAACCGAAGT+TGG | + | chr7_1:22797181-22797200 | Msa1014300:intron | 45.0% | |
| !! | TGAACCGAAGTTGGTACAAC+CGG | + | chr7_1:22797190-22797209 | Msa1014300:intron | 45.0% |
| GAAACCGGTTGTACCAACTT+CGG | - | chr7_1:22797197-22797216 | None:intergenic | 45.0% | |
| ! | TTGGTACAACCGGTTTCTAG+TGG | + | chr7_1:22797200-22797219 | Msa1014300:intron | 45.0% |
| CTTGAAGCAGAGTTGCTTGA+AGG | + | chr7_1:22797439-22797458 | Msa1014300:CDS | 45.0% | |
| GGGTGTGTTAACTGCAAAAG+AGG | + | chr7_1:22797761-22797780 | Msa1014300:intron | 45.0% | |
| TCGTACACTGTTGTGAAGAG+TGG | - | chr7_1:22797828-22797847 | None:intergenic | 45.0% | |
| !! | CAACTATAGCTGATGGTGGA+AGG | - | chr7_1:22797866-22797885 | None:intergenic | 45.0% |
| GCAGTGGAAAATGTGTGACT+TGG | - | chr7_1:22798021-22798040 | None:intergenic | 45.0% | |
| ! | CATTTTCCACTGCAACATGC+AGG | + | chr7_1:22798028-22798047 | Msa1014300:three_prime_UTR | 45.0% |
| !! | AGCTGTGCTATTTCTAGCGA+AGG | - | chr7_1:22798250-22798269 | None:intergenic | 45.0% |
| !! | TTATTATTAAATAATATTCA+TGG | - | chr7_1:22794974-22794993 | None:intergenic | 5.0% |
| CTCCCGATAGATTGTGCCAT+CGG | - | chr7_1:22793574-22793593 | None:intergenic | 50.0% | |
| !! | ATTCGGTGTGCATCGAACCT+AGG | + | chr7_1:22794251-22794270 | Msa1014300:intron | 50.0% |
| GTATGTAGGTTCAAGTGGCG+AGG | + | chr7_1:22794493-22794512 | Msa1014300:intron | 50.0% | |
| TTTGACCTAGCTTGACTCCG+GGG | - | chr7_1:22795030-22795049 | None:intergenic | 50.0% | |
| GATCCGGACCTTGAAAATGC+AGG | + | chr7_1:22795061-22795080 | Msa1014300:CDS | 50.0% | |
| GGGATGGAGGTCAAGAAAGA+AGG | + | chr7_1:22795610-22795629 | Msa1014300:CDS | 50.0% | |
| GGGGGCCAATATAGCAAATG+AGG | + | chr7_1:22795693-22795712 | Msa1014300:CDS | 50.0% | |
| AAACCAGACCGAAACCAGTC+TGG | + | chr7_1:22797106-22797125 | Msa1014300:intron | 50.0% | |
| !! | GTGGTTCACCAGACTGGTTT+CGG | - | chr7_1:22797117-22797136 | None:intergenic | 50.0% |
| CCAATTGTGGTTCACCAGAC+TGG | - | chr7_1:22797123-22797142 | None:intergenic | 50.0% | |
| CCAGTCTGGTGAACCACAAT+TGG | + | chr7_1:22797120-22797139 | Msa1014300:intron | 50.0% | |
| CTACTTCAACCATGATCCGG+AGG | + | chr7_1:22797296-22797315 | Msa1014300:intron | 50.0% | |
| GCTTGAAGGCCAGAAATTGC+AGG | + | chr7_1:22797453-22797472 | Msa1014300:CDS | 50.0% | |
| ! | TATGAGGTTCTAACCGCTCG+CGG | + | chr7_1:22797786-22797805 | Msa1014300:CDS | 50.0% |
| CTGTTTCCTGCATGTTGCAG+TGG | - | chr7_1:22798037-22798056 | None:intergenic | 50.0% | |
| GGCTATCAAGAACCACTAGC+AGG | + | chr7_1:22798148-22798167 | Msa1014300:three_prime_UTR | 50.0% | |
| ACAAGGCCAACAAGGCTGCA+CGG | - | chr7_1:22793889-22793908 | None:intergenic | 55.0% | |
| TATCTCCCCGGAGTCAAGCT+AGG | + | chr7_1:22795022-22795041 | Msa1014300:CDS | 55.0% | |
| !! | TCACCAGACTGGTTTCGGTC+TGG | - | chr7_1:22797112-22797131 | None:intergenic | 55.0% |
| CCTGTGAAACCTCCGGATCA+TGG | - | chr7_1:22797308-22797327 | None:intergenic | 55.0% | |
| CCATGATCCGGAGGTTTCAC+AGG | + | chr7_1:22797305-22797324 | Msa1014300:intron | 55.0% | |
| !! | CACGATCTCTGAGGCTTCCA+CGG | - | chr7_1:22797933-22797952 | None:intergenic | 55.0% |
| GTGTGGAAACAGCCTGCTAG+TGG | - | chr7_1:22798163-22798182 | None:intergenic | 55.0% | |
| AAGGCCAACAAGGCTGCACG+GGG | - | chr7_1:22793887-22793906 | None:intergenic | 60.0% | |
| CAAGGCCAACAAGGCTGCAC+GGG | - | chr7_1:22793888-22793907 | None:intergenic | 60.0% | |
| ! | AGGTTCTAACCGCTCGCGGA+TGG | + | chr7_1:22797790-22797809 | Msa1014300:CDS | 60.0% |
| ! | GGTTCTAACCGCTCGCGGAT+GGG | + | chr7_1:22797791-22797810 | Msa1014300:CDS | 60.0% |
| CGTGGAAGCCTCAGAGATCG+TGG | + | chr7_1:22797931-22797950 | Msa1014300:three_prime_UTR | 60.0% | |
| CCTCAGAGATCGTGGCGACT+CGG | + | chr7_1:22797939-22797958 | Msa1014300:three_prime_UTR | 60.0% | |
| ! | GATGCCCCGTGCAGCCTTGT+TGG | + | chr7_1:22793880-22793899 | Msa1014300:intron | 65.0% |
| CCTCTCTACCCATCCGCGAG+CGG | - | chr7_1:22797802-22797821 | None:intergenic | 65.0% | |
| CCGAGTCGCCACGATCTCTG+AGG | - | chr7_1:22797942-22797961 | None:intergenic | 65.0% | |
| CCGCTCGCGGATGGGTAGAG+AGG | + | chr7_1:22797799-22797818 | Msa1014300:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 22793355 | 22798439 | 22793355 | ID=Msa1014300;Name=Msa1014300 |
| chr7_1 | mRNA | 22793355 | 22798439 | 22793355 | ID=Msa1014300-mRNA-1;Parent=Msa1014300;Name=Msa1014300-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.55|0.4|1|1|1|10|528|312 |
| chr7_1 | exon | 22793355 | 22793448 | 22793355 | ID=Msa1014300-mRNA-1:exon:5323;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22794833 | 22794909 | 22794833 | ID=Msa1014300-mRNA-1:exon:5324;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22795010 | 22795082 | 22795010 | ID=Msa1014300-mRNA-1:exon:5325;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22795497 | 22795714 | 22795497 | ID=Msa1014300-mRNA-1:exon:5326;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22796335 | 22796398 | 22796335 | ID=Msa1014300-mRNA-1:exon:5327;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22796659 | 22796696 | 22796659 | ID=Msa1014300-mRNA-1:exon:5328;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22796789 | 22796909 | 22796789 | ID=Msa1014300-mRNA-1:exon:5329;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22797004 | 22797058 | 22797004 | ID=Msa1014300-mRNA-1:exon:5330;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22797426 | 22797474 | 22797426 | ID=Msa1014300-mRNA-1:exon:5331;Parent=Msa1014300-mRNA-1 |
| chr7_1 | exon | 22797762 | 22798439 | 22797762 | ID=Msa1014300-mRNA-1:exon:5332;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22793355 | 22793448 | 22793355 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22794833 | 22794909 | 22794833 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22795010 | 22795082 | 22795010 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22795497 | 22795714 | 22795497 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22796335 | 22796398 | 22796335 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22796659 | 22796696 | 22796659 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22796789 | 22796909 | 22796789 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22797004 | 22797058 | 22797004 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22797426 | 22797474 | 22797426 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | CDS | 22797762 | 22797911 | 22797762 | ID=Msa1014300-mRNA-1:cds;Parent=Msa1014300-mRNA-1 |
| chr7_1 | three_prime_UTR | 22797912 | 22798439 | 22797912 | ID=Msa1014300-mRNA-1:three_prime_utr;Parent=Msa1014300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
